>input_sequence_21330
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-------------------------------------------ATGCTGGGCGCCGCACGCGGCGGCTCCACGTGTCCAC
GCGCCCGCTGCTGCGTGGAAGGAATAGAGGCCTCCCTGTGCATACGCGCGACGTGGCCGCCCCGGACGGGCCAGATGCTC
CCCATCCGGCCGCAGAGGCGCCGGTGCACGGTACCACCTGTCCGAGACCCTCGCGCCGCCTCCCGGGAGAGGATATTTAA
AGCGGGGGCAGGGGCCCCGCCGTACTCTCGCTTGGCACCGCTCTCCGCCTTGCGCTCGAGATCTCATCCGATCCTCACC-
----CCACCCATGCCGACTGATCATGGCAGCAGCAGCGACGGCGGCCACCAGGCGCAATGTCGGCGGAGGGGCGCCAGCG
TCGACGTCGAGCTCCGCGCCGCCATGGCGCTGGCCGACATGGCGGGGGCCGGGGCCGGGGCGGCCGCCGACCACGCGCTC
CCGGCGCAGCACCTGCAGCACGCCGCCGCCCCAGCAGCTCAGGTAATCGATTTCGCCGATTAGCTAGCTGGCCCTATTTT
GGTTTTCGGTTTGGAAGGATTTGGATTGATTTGGCCGGCCGTGCGTGGGTAGCAGGCGGCGATGGAGCACGAGGACGAGG
AGCTGGCGAGCACGAGGCTCAGCCTTGAGCTGGGCAACGTCGGCATCCAGTCCTCCCCATGTTCCAGCAGCTCCAGCGGC
GCCGGGCAGCAACCGCCGCAGTCGTCCGCGGCCGTGACGGGATACGGCCTCAGCAGACCGCGGCACATGCTCACCGAGGT
AATTAACTCGCTCACTTGCTACGTTGCATCGGCTAACCCCTGCAAATTACANNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNTCCATCTCCACCGGGGCGTCGTCTGAGCCGCCAATCGACGAAACATTGCAGGCAGAGAAGGAGGCGAAGCG
GCTGCGGCGCGTGCTCGCGAACCGGGAGTCCGCCCGGCAAACCATCCTTCGCCGCCAGGTGATTAATTGCTAGCTAGCTC
C-ATCCATGTGCACATTAATTACCACCACAGCTGCCGTGGCATCAACCGTGTCTGATGATTCTGACACGATTCGCGCCGT
GTCGTCGTGTCCAGGCGATCCGGGACGAACTGGCGAGAAAAGTCGCGGATTTAGCGTCGCAGAACGAGAACATGAAGAAG
GTACTGTAATTAAGCAGCGTCATGTATATTCATGGAGGATCTTGAAATGTCAGATCACCATCAAGTTGCTTAATTAATCC
TGAACGGTGCAGGAGAAGGACATGGTGCTGGAACAGTACCTCACGCTCAAGGAGACGAACAAGCAGCTGAAACAACAGGC
ACATCATCTATCGCTTTCCTTCCTTTAATTTCCT----TTTTTCCCGTCATCCATTATTAGTACTCCCCCTGCCACCACC
ATTGTTAGGCAACGGAAAAGAAAAGAAAAGAAATCCCAGAAGGGAACCTAGTATGTTCCAATCCAGCTCCAGTTGTGCCC
CCACGAGAGGACTACCAGTCACCGCTGCAGTACACCTATGCTAGTAGGCGTACTAATTATGGTCAAACCGGGGGCCTGTC
AATCGCTCATGTCTGTATATTATTTACATTTTGCTCCGACAGTGATGTTCGGACAATAATATACTCTATGTGCCCTCCCT
TCTGTATTTGTCTTTTGCTTCTTTGGGTATGTGCTTGCTTTCTCGGCACGAACACATGCGTGTGCGCCAACTTGCTGATG
CGTCCGCATATCTGTCCAGCCGGGTGGTCGGTCTAGTCGGTTCCGCGATCGGGATCCGGTGGAGGATTGCGGCACGGGTT
TGGGCCTGCTCGTGCAGGTAGCGGCCATGTGTACGTACGTAGCTCGGTGCATCATTGACGGACAGGTGACGATCCACGGT
TGGGCAAGCGGCCAAGGAGCATCGCGACTTCAGATCGATCTCGGTCTGGGAGGCTATTGTGTTCGGTCTGGATAAACTCT
TGAGGCGAGCTAGCAGGGCGTCCACCCTTCGCGAAATTTCCATGGATGCCGTGGCACGGTGCACCGGATCAAACCGGCAG
GATGCTGATAGAATCTCGGCAAACTTCGTTACGGGTGTCTCTAA----TAAAGTCTGAACCAAGAAACGGAAGCAGTCCG
TTCTAGAATTATTATTTGGATTTTCTTTTAAATTAAAAAAGCGACCGATCGGTGGAAACGCATGCCAGCCTCGCCATGCA
TGCGCCATGTCGGCGGTGGGGTGAGCCATACAAAATGTTGATGCCATGGCAATGGCATGCAGCAATGGTTGCACGCGGCA
ACAGTGGTTCCTCTGAACGAATCTTCTTGTTTTTCCTCATCTTTCGACAGATCTGGAAACAGTGAAATTCGTTGAATATG
ATCGTTGCACGTTTCACTAGTCGGCGGGCAGCTGGCTCTTCATCAGGCACTAATAATAATAGTTAAACAACATGCGTTCG
CCAGACGGAGCACTACTTTTCTCTCTACGT-ACTGTGGAAGAACATGCGGAATCTTTTCTCGTGCCTGAACTTGTCACAC
GCAAAGTAAGTGCTAAGTGCTGAGTCGGGTAATTAACTTTTTTGTCTGTCTTTGCAGGTGGCCAAGACGACCAAGAAGAA
GCCGTCGTCTACACCAGCGATCACGCCCATGGACATCGCGCCGCCCGCACAGAGCGCGGAGGCCACCCCGCCGCAGACGC
CGCCGCAGCCAAGCTTCCTGTACAGCGCGCCGCCGACGTCCATGCCTGTGCCCTACGTCTGGGGCTCCTGGCCCCCGTGC
GGTCCGGGGGTGTACGAGCATGGTGGCAACCCGGCTGGCATGGCGGGACACGCTCCGACGCCGCTCTGCGTCCCGCCGGC
CTGCGCGTGGTATTACCCCGTCGTCGCCGCTTCCACCGACCCCCGCGGCTCGCCGCCGGCCTACGTGCAGCCGTTCCAGG
AGCCGACAGGCAGTGGCGGGACGGCCGGGGAGGACACCGACGACGACCCTTGCTCGCTGACCCTCGCCATCGACGCTGCC
GACAAGAAGAGCCCCGCCGCCGGTCCCAACGCTTACCAAAGTAGCAGCGGCGTGGTGGGGGCAGTGGGGCTGCAGGTCGC
GCTTAGCGGCAGAGAGAAGGCGGCGACGGCGGCCGAGGCGAGGAAGAGGAGGAAGGAGCTCACCAAGCTGAAGCAAATGC
ACGGCGGAAGCCGCCATGGCGCTGGCGAGCACTGGTGA------------------------------------------
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--------------------------------------------------------------------
>chr4B_1_TraesCS4B01G117400
TTCAAAATCTTTTTTAAACATCACTACACCATTTTTCTTTC-TATGAATTTCTTTCAAGGCCCCACACAAAAGTAACATC
GGATTTTGGCATATACCTACCTTTAATAAAAAGTTGTTTGTACAGGAGCGACAATCTTAGGAGCTATAACAGTAGTTCTA
TTGTTCAC------------------------------------------------------------------------
TACCTTATCAACCAACTTGAAACTACATTGTTTATGCAAATAGGCGCATACTACATCTTAAGCATTTTAGCATCTTGACA
TTTAGGCAACAAGGTTAAGATTCCAGAGTTCAGTAATCTAGACGACTCAATTGTACTATGGAAAATTCATTAAACAAATG
CAACATAGAATCTCCTACTACCATATACAAACACCTGAAATTGGAATAAGTGTAGATACTTTACAAGCATGAGCTCACCC
GTGAGAGAGCAAAATGAAGGATGCAAAAACGAAAGCAATCACATAGACCTAAAAGGACACAGGCCAATTGCTTGAGCCGA
GCAGCCGACCTCCACACTTGAACACGATCTAGCTTAGCTAGACA-----ACGGGAACATCATCTTTGCTTAATTAGGAAG
CAATACTTCGCATCGGCACACCAAAACAGATTGGGGACGACGAGAGACAAAAACGGAATCATGCATAGACGAGCTAGCAG
TAGATACATTTACTATTTTGTTTCGGCTGCCGGATGAAACGCATCGGCCATTTCGATGGCGCTGACAAGCTTTGGCTTTG
CCCGTGCATGCGATGCAGCTCCGACCGCAGCCAAAGGCTCCAGTTGCGTGGTCTTCTAGGCACTTCCACCCACCGGCGT-
---CCGGTTC-CACACGCGGCGGCTGCTCCGGGCTGCTGACCTGTGGGCTCCTCCATCCCATCCCGGCGACGAGTCACCG
GGCCTTAACCCGGCCCACGTGTACCGCTGCGGCGATCCACGTCGACGCCCCGCAGCACGGGCTCTCCCGCTGGCTCCCGG
GACCCGCACCCCGCCTCCTCGTTTCACGAGCCCGTCGCGCTGCATGCTGGGCGCCGCACGCGGCGGCTCCACGTGTCCAC
GCGCCCGCTGCTGCGTGGAAGGAATAGAGGCCTCCCTGTGCATACGCGCGACGTGGCCGCCCCGGACGGGCCAGATGCTC
CCCATCCGGCCGCAGAGGCGCCGGTGCACGGTACCACCTGTCCGAGACCCTCGCGCCGCCTCCCGGGAGAGGATATTTAA
AGCGGGGGCAGGGGCCCCGCCGTACTCTCGCTTGGCACCGCTCTCCGCCTTGCGCTCGAGATCTCATCCGATCCTCACC-
----CCACCCATGCCGACTGATCATGGCAGCAGCAGCGACGGCGGCCACCAGGCGCAATGTCGGCGGAGGGGCGCCAGCG
TCGACGTCGAGCTCCGCGCCGCCATGGCGCTGGCCGACATGGCGGGGGCCGGGGCCGGGGCGGCCGCCGACCACGCGCTC
CCGGCGCAGCACCTGCAGCACGCCGCCGCCCCAGCAGCTCAGGTAATCGATTTCGCCGATTAGCTAGCTGGCCCTATTTT
GGTTTTCGGTTTGGAAGGATTTGGATTGATTTGGCCGGCCGTGCGTGGGTAGCAGGCGGCGATGGAGCACGAGGACGAGG
AGCTGGCGAGCACGAGGCTCAGCCTTGAGCTGGGCAACGTCGGCATCCAGTCCTCCCCATGTTCCAGCAGCTCCAGCGGC
GCCGGGCAGCAACCGCCGCAGTCGTCCGCGGCCGTGACGGGATACGGCCTCAGCAGACCGCGGCACATGCTCACCGAGGT
AATTAACTCGCTCACTTGCTACGTTGCATCGGCTAACCCCTGCAAATTACANNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNTCCATCTCCACCGGGGCGTCGTCTGAGCCGCCAATCGACGAAACATTGCAGGCAGAGAAGGAGGCGAAGCG
GCTGCGGCGCGTGCTCGCGAACCGGGAGTCCGCCCGGCAAACCATCCTTCGCCGCCAGGTGATTAATTGCTAGCTAGCTC
C-ATCCATGTGCACATTAATTACCACCACAGCTGCCGTGGCATCAACCGTGTCTGATGATTCTGACACGATTCGCGCCGT
GTCGTCGTGTCCAGGCGATCCGGGACGAACTGGCGAGAAAAGTCGCGGATTTAGCGTCGCAGAACGAGAACATGAAGAAG
GTACTGTAATTAAGCAGCGTCATGTATATTCATGGAGGATCTTGAAATGTCAGATCACCATCAAGTTGCTTAATTAATCC
TGAACGGTGCAGGAGAAGGACATGGTGCTGGAACAGTACCTCACGCTCAAGGAGACGAACAAGCAGCTGAAACAACAGGC
ACATCATCTATCGCTTTCCTTCCTTTAATTTCCT----TTTTTCCCGTCATCCATTATTAGTACTCCCCCTGCCACCACC
ATTGTTAGGCAACGGAAAAGAAAAGAAAAGAAATCCCAGAAGGGAACCTAGTATGTTCCAATCCAGCTCCAGTTGTGCCC
CCACGAGAGGACTACCAGTCACCGCTGCAGTACACCTATGCTAGTAGGCGTACTAATTATGGTCAAACCGGGGGCCTGTC
AATCGCTCATGTCTGTATATTATTTACATTTTGCTCCGACAGTGATGTTCGGACAATAATATACTCTATGTGCCCTCCCT
TCTGTATTTGTCTTTTGCTTCTTTGGGTATGTGCTTGCTTTCTCGGCACGAACACATGCGTGTGCGCCAACTTGCTGATG
CGTCCGCATATCTGTCCAGCCGGGTGGTCGGTCTAGTCGGTTCCGCGATCGGGATCCGGTGGAGGATTGCGGCACGGGTT
TGGGCCTGCTCGTGCAGGTAGCGGCCATGTGTACGTACGTAGCTCGGTGCATCATTGACGGACAGGTGACGATCCACGGT
TGGGCAAGCGGCCAAGGAGCATCGCGACTTCAGATCGATCTCGGTCTGGGAGGCTATTGTGTTCGGTCTGGATAAACTCT
TGAGGCGAGCTAGCAGGGCGTCCACCCTTCGCGAAATTTCCATGGATGCCGTGGCACGGTGCACCGGATCAAACCGGCAG
GATGCTGATAGAATCTCGGCAAACTTCGTTACGGGTGTCTCTAA----TAAAGTCTGAACCAAGAAACGGAAGCAGTCCG
TTCTAGAATTATTATTTGGATTTTCTTTTAAATTAAAAAAGCGACCGATCGGTGGAAACGCATGCCAGCCTCGCCATGCA
TGCGCCATGTCGGCGGTGGGGTGAGCCATACAAAATGTTGATGCCATGGCAATGGCATGCAGCAATGGTTGCACGCGGCA
ACAGTGGTTCCTCTGAACGAATCTTCTTGTTTTTCCTCATCTTTCGACAGATCTGGAAACAGTGAAATTCGTTGAATATG
ATCGTTGCACGTTTCACTAGTCGGCGGGCAGCTGGCTCTTCATCAGGCACTAATAATAATAGTTAAACAACATGCGTTCG
CCAGACGGAGCACTACTTTTCTCTCTACGT-ACTGTGGAAGAACATGCGGAATCTTTTCTCGTGCCTGAACTTGTCACAC
GCAAAGTAAGTGCTAAGTGCTGAGTCGGGTAATTAACTTTTTTGTCTGTCTTTGCAGGTGGCCAAGACGACCAAGAAGAA
GCCGTCGTCTACACCAGCGATCACGCCCATGGACATCGCGCCGCCCGCACAGAGCGCGGAGGCCACCCCGCCGCAGACGC
CGCCGCAGCCAAGCTTCCTGTACAGCGCGCCGCCGACGTCCATGCCTGTGCCCTACGTCTGGGGCTCCTGGCCCCCGTGC
GGTCCGGGGGTGTACGAGCATGGTGGCAACCCGGCTGGCATGGCGGGACACGCTCCGACGCCGCTCTGCGTCCCGCCGGC
CTGCGCGTGGTATTACCCCGTCGTCGCCGCTTCCACCGACCCCCGCGGCTCGCCGCCGGCCTACGTGCAGCCGTTCCAGG
AGCCGACAGGCAGTGGCGGGACGGCCGGGGAGGACACCGACGACGACCCTTGCTCGCTGACCCTCGCCATCGACGCTGCC
GACAAGAAGAGCCCCGCCGCCGGTCCCAACGCTTACCAAAGTAGCAGCGGCGTGGTGGGGGCAGTGGGGCTGCAGGTCGC
GCTTAGCGGCAGAGAGAAGGCGGCGACGGCGGCCGAGGCGAGGAAGAGGAGGAAGGAGCTCACCAAGCTGAAGCAAATGC
ACGGCGGAAGCCGCCATGGCGCTGGCGAGCACTGGTGAGTGAGCTGCTAATCATGGCAGGTTACTAGGTGATCGAGGACG
CATGCATGCATGGCACTACTGCCGCTGAGTCACTGACAAGGCATCGGTGATCAACTGATGATGACGATTGGTTCCTTGGA
CGCAAGCAATAGCACTGATATTAGTACAGCTCCTACCAATTTTTCTAATGTTCTTAATATTTCCATCTCGTTTGTCTAGG
AACGTAGGTTTGCATTTCAGTTACGCCCCAAGGCACTGAAGAAATGTATTCGGTTTTGTTTTGAGATTCTTTGGTGCAAT
CTGTAACCGGATAAATAACTAGTGGTCCGATCATGTATAGCACCGGAGTTGTGCGTAATGTAACGATTCTTTACGTCCCA
GAAGCATTTTTTT---------GTACCACACACAACAAAGTAAATCAAGCGAAGTAAGGA--ATATCTATTCTCGTTGTC
CTAACATGGCTCGTCACCTAAACTTGAATCTGAAATATACCGGG-ACTTAAGAGTAACTCTAGCAGATTTTCTACTAAAC
AGTCTTAGTA---CTA--------------------------------AGTCTCAGTTATATACGCGAGATCTTTAAGAT
TCCTG-------------------------------------------------------------------------TG
TTAGTCGATTGAGACCTAGTCACACTCATCTATAGAACCTCACAATCCCGATTGAGACCTAGTCACACCCATCTATAGAA
CCTCACAATCCTTATAATTTCTGTACGTTCG----------------------------GCCCGTAAGAATATACAAACG
GACCATATATTCCCGACTTCGCCACTATATTTACCTGATCCCGGCCAATTTAGGGTTCCCATCCGGCATTTCTCCAACCC
ATATCTCTCGCAATCTTCATACTCCGGCGACTGATTCCTG--CACACACGCACCCGTTTAGAGCACATCAATGGCCGGCG
GAGGTCGCCAAAGAGCGCGGTGCCCTCTCCTGCAACCGCAGCTCGAAAGCGTGCCAAAGAGTGCGGCGCCCTCTCCTGCA
ACCATGACTGGAAAGCGTGGAGCAGCTTCCACGAGGTCGGGGATGCGCTTTGGCCCACCACCAAGGGG
>chr4A_1
TTGAAAATCGTTTTTAAACATCACTACAACATTTTTCTTTTTTATGAATTTCATTCAAGACCCCACACAAAAGTAACAGC
AGATTTTCTCATATAGCTACCTTTAATAAAAACTTGTTAGTACAGGAGCTACAATCTTAGGAGCTATAACAGTAGTTCTA
TTGTTCAC------------------------------------------------------------------------
TGATGA---------------------------------------------------------------------TGACA
TTTAGGCAACAAAGTTAGGATTCCATAGTTCA---ATCTAGACGAGTCAATTCTACCATGGGAAATCCATTAAACAAATG
CAACATAGAATCTCCTACTACCATATACAAACACCTGAAATTGGAATAAGTGTAGATACTTTGCGAGCATGAGCTCACCC
GTGAGAGAGCAAAATGAAGGATGCAAAAACGAAAGCAACCACACGCACCTAAAACGACACAGGCCAATTGCTTGAGCCGA
GCAGCCGACCTCCACAGTTGAACACGATCTAGCTTACCTAGACAGA-AAACGGGAACATCATCTTTGCTTAATTAGGAAG
CAATACTTCGCATCGGCACACAAAAACATATCGGGGACGACGAGAAACAAAAACGGAATCATGCATAGACGAGCTAGCAG
TAGATAC-------ATTTTGTTTCGGCCGCTGGATGGAACGCATCGGCCATTTCGATGGCGCTGACAAGCTTTGGCTTTG
CCCGTGCATGCGATGCAGCTCCGACCGCAGCCAAAGGCTCCAGTTGCGTGGTCTTCTAGGCACTTCCACCCACCGGCGTC
CGTCCGGTTT-CACACGCGGCGGCTGCTCCGGCCTGCTGACCTGTGGGCTCCTCCGTCCCATCCCGGCGACGAGTCACCG
GGCCGTAACCCGGCCCACGTGTACCGCTGCGGCGATCCACGTCGACGCCCGGCAGCACGGGGGCTCCCGCTGGCCCCCGG
GGCCCC----------CCTCGTTTCACGAGCC-GTCGCGCTGCATGCTGGGCGCCGCACGCGGCGGCTCCACGTGTCCAC
GCCCCCGCTGCTGCGTGGAGGGAATAGAGGCCTCCCTGTGCATACGCGCGACGTGGCCGCGCCGGACGGGCCAGATGCTC
CCCATCCGGCCGCAGAGGCGCCGGTGCACGGTACCACCTGTCCGAGGCCCTCGCGCCGCCTCCGGGGAGAGGATATTTAA
AGCGGGGGCAGGGGCCCCGCCGTACTCTCGCTTGGCACCGCTCTCCGGCTTGCGCTCGAGATCTCATCCGATCCTCACCG
CCCCCCACCCATGCCGACTGATCACGGCAGCAGCAGCGACGGCGGCCACCAGGCGCAATGCCGGCGGAGGGGCGCCAGCG
TCGACGTCGAGCTCCGCGCCGCCATGGCGCTGGCCGACATGGCGGGGGCCGGGGCCGGAGCGGCCGCCGACCACGCGCTC
CCGGCGCAGCGCCTGCGCCACGCCGCCGCCCCAGCGGCCCAGGTATTCGATTTCGCCGATTGGGTAGCTGGCCCTATTTT
GGTTTTCGGTTTGGGAGGATTCCGATTGATTTGGCCGGCCGTGCGTGGGTAGCAGGCGGCGATGGAGCAGGAGGACGAGG
AGCTGGCGAGCACGAGGCTGAGCCTTGAGCTGGGCAACGTCGGCATCCAGTCCTCCCCTTGCTCCAGCAGCTCCAGCGGC
GCCGGGCAGCAACCGCCGCAGTCGTCGGCGGCCGTGACGGGATACGGCCTCAGCAGACCGCGGCACATGCTCACCGAGGT
AATTAACCCGCTCACTTCTTACGTTGCATCGATCAACCCCTGCAAATTACACCCG-------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------CATCTCCACCGGCACGTCGTCTGAACCGCCAATCGACGAAACATTGCAGGCGGAGAAGGAGGCGAAGCG
GCTGCGGCGCGTGCTCGCGAACCGGGAGTCCGCCCGGCAAACCATCCTCCGCCGCCAGGTGACTAATCGCTAGCTAGCCC
GAATCCATATGTAAATTAATTACTACTACAGCTGCTGTGGCATCAACTGTGTCTGATCATTCTGATACGATTCGCGCCGT
GTCGTCGTGTCCAGGCGATCCGGGACGAACTGGCGAGGAAAGTCGCGGATTTAGCGTCGCAGAACGAGAACATGAAGAAG
GTACTCTAATTAAGCAGCGTCATGTGTATTCCTGGAGTATCTTGAAATGTCAGATCACCATCAAGTTGCTTAATTAATCC
CGAACGGTGCAGGAGAAGGACAAGGTGCTGGAACAGTACCTCACGCTCAAGGAGACGAACAAGCAGCTGAAACAACAGGC
ACATCATCTATCGCTTTCATTCCTTTAATTTCCTTCCCTTTTCCCCGTCATCCATTATTAGTACTCCCCCTGCTACCACC
ATTGTTAGGCAACGGAAAAGAAAAGAAAAGAAATCCCAGAAGGGAACCTAGTATGTTCCAATCCAGCTCCAGTTGTGCCC
CCACGAGAGGACTACAGTCA--CGCTGCAGTACACCTATGCTAGTACGAGTACTAATTATGGTGAAACCGGGGGCCTGTC
AATCGCTCATGTCTGTATATTATTTACATTTTGCTCTGACAGTGATGTTCGGACAATAATATACTCTATGTGCCCTCCCT
TCTGTATTTGTCTTTTGCTTCTTTGGGTATGTGCTTGCTTTCTCGGCGCCAACAGATGCGTGTGCGCCAACTTGCTGATG
CGTCCGCATATCTGTCCAGCCGGGTGGTCGGCCTAGTCGGTTCCGCGATCGGGATCCGGTGGAGGATTGCGGCACGGGTT
TGGCCGTGCTCGTCCAGGTAGAGGTCATGTGTACGTACGTAGCTCGGTGCATCATTGACGGACAGGTGACGATCCACGGT
TGGGCAAGCGGCCAAACAGCATCGCGACTTCAGATCGATCTCGGCCTCGGAGGCTATTGTATTCGGTCTGGATAAACTCT
GGT-GCGAGCTAGCCGGGCGTCCACCCTTCGCGAAATTTCCATGGATGCGGTGACACGCTGCACCGGATCAAACCGGCAG
GATGCTGATAGAATCTCGGCAAACTTCGTCACGGGTGTATCT-----TTAAAGTCTAAACCAAGAAACGGAAGCAGTCCA
TTCTAGAATTATTATTTGGATTTTCTTTT----TAAAAAAGCGACCAATCGGTGCAAACACATGCCGGCCTCGCCATGCA
TGCGCCATGTCGGCGGCGGG-TGAGCCATACAAAATGTTGATGCCATGGCAATGGCATGCAGCAACGGTTGCACGCGGCA
ACAGTGGTTCCTCTGAACGATTCTTCATCTTTTTCCACATCTTTCGACAGATCTGGAAACAGTGAAATTCGTTGAATATG
ATCGTTGCACGTTTCTCTAGTCGGCGGGCAGCTGGCTCTTCATCAGGCACTAATAATAATAGTTAAATAACATGCGTTCG
CTAGACGGAACACTAGTTTTCTCGCTACGTAACTGTGGAAGAACATGCGGAATCTTTTCTCGTGCCTGAACTTGTCACAC
GCAAAGTAAGTG-TAAGTGCTGAGTCGGG----TAACTTTTTTGTCTGTCTTTGCAGGTGGCCAAGACGACCAAGAAGAA
GCCGTCGTCTACACCAGCGATCACGCCCATGGACATCGCGCCGCCGGCACAGAGCGCGGAGGCCACCCCGCCACAGACGC
CGCCGCAGCCAAGCTTCCTGTACAGCGCGCCGCCGACGTCCATGCCTGTGCCCTACGTCTGGGGCTCCTGGCCCCCGTGC
GGGCCGGGGGTGTACGAGCATGGCGGCAACCCGGCTGGCATGGCGGGACACGCTCCGCCCCCGCTCTGCGTCCCGCCGGC
CTGCGCGTGGTACTACCCCGTCGTCGCCGCTG---------CCCGCGGCTCGCCCCCGGCCTACGTGCAGCCGTTCCAGG
AGCCGACAGGCAGTGGCGGGACGGCCGGGGAGGACACCGACGACGACCCTTGCTCGCTGACCCTCGCCATCGATGCTGCC
GACAAGAAGAGCCCCGCCGCCTGTCCCAACGCTTACCAAAGTGGCAGCGGCGTGGTGGGGGCAGTGGGGCTGCAGGTCGC
GCTTAGCGGCAGAGAGAAGGCGGCGACGGCGGCGGAGGCGAGGAAGAGGCGGAAGGAGCTCACCAAGCTGAAGCAGATGC
ACGCCGGAAGCCGCCATGGCGCTGGCGAGCACTGGTGAGCGAGCTGCTAATCATGGCAGGTTACTAGGTGATCGAGGACG
CATGCATGCATGGCACTACTGCCGCTGAGTCACTGACAAGGCATCGGTGATCAACTGATGATGACGATTGGTTCCTTGGA
CGCAAGCAACAGCACTGATATTAGTACAGCTCCTACCAATTTTTCTAATGTTCTTAATATTTGCATCGCGTTTGTCTAGG
AACGTAGGTTTGCATTTCAGTTACGCCCCAAGGCACTGAAGAAATGTGTTCGGTTTTGGTTTGAGATTCTTTGGTGCAAT
CTGTAACCGGATAAATAACTAGTGGTCCGATCATGTATAGCACCGGAGCTGTGCGTAATGTAACGATTCTTTACGTCCCA
GCAGCATTTTTTTGTATGTTCAGTACCACACACAACAAAGTAAATCAAGCGAAGTAAGGATAATATCTATTCTCGTTGTC
CTAACATGGCTCGTCACCTAAACTTGAATCTGAAATATACCGGGGACTT-AGAGTAACTTTAGCAGATTCTCTTGTAAAC
AGTCTTGCCAAGTCTCAGATTCTCTTGTAAACAGTCTTGCCAAGTTTGAGTCGATGCTACGTACGCGAGATCTTTAAGAT
CCGTGCATTTTTTATTCGGTTTTTTCTTTTTCTTTTGCATTTTACGTCACTTGATTTAGAGACAAAGAATCGGTTAAATG
TTAGTTGACTGAGATCTAGCCACACCT-------------------------------------------ATCTATAGAA
CCTCATAATTCTTATAATTTTTGAATGTTTTATTTTTCGACCATGATAAAAAAGACCCAGCCCGTAAGAATATACAAAAG
GACCTTATATTTCTGACTTCGCCACTATATTTACTGGATCCTGGCCAATTTAGGGTTCCCATCCGGCATTTCTCCAACCC
ATCTCTGTCGCAATCCCCATACTCCGATGATTGATTCTTGCACACACACACACCCGTTTAGAGCATATCAATGG-CGGCC
GAGGTCGCCAAAGAGCGCGGCGCCCTTTCCTGCAACCACGGCTGGAAAGCGTGCCAAAGAGCGGA--GCCCTCTCCTGCA
ACCATGGATGGAAAGCGTGGAGCAGCTTCCA-------------------------------------
>chr4D_1
TTCAAAATCTTTTTTAAACATCACTACAACATTTTTCTTTTTATGC-ATTTCATTCAAGGCCCCACACAAAAGTAACATC
AGATTTTGGCATATACCTACCTTTAATAAAAAGTTGTTTGTACAGGAGCTACAATCTTAGGAGCTATAACAGTAGTTCTA
TTGTTCACTACCTTATCCAACTGAAACTAACATTGTTTTATCAAATAGGCGCATACTACATCTTAAGCATTTTAGCATCT
TGATGA---------------------------------------------------------------------TGACA
TTTAGGCAACAAAGTTAGGATTCCATTGTTCA---ATCTAGACGAGTCAATTCTACCATGGAAAATTCATTAAACAAATG
CAACATAGAATCTCCTACTACCATATACAAACACCTGAAATTGGAATAAGTGTAGATACTTTGCAAGCATGAGCTCACCC
GTGAGAGAGCAAAATGAAGGATGCAAAAACGAAAGCAACCACACGCACCTAAAACGACACAGGCCAATTGCTTGAGCCGA
GCAGCCGACCTCCACACTTGAACACGATCTAGTTTACCCTAGCTAGGAAACGGGAACATCATCTTTGCTTAATTAGGAAG
CAATACTTCGCATCGGCACACAAAAACAGACTGGGGACGA---GAAACAAAAACGGAATCATGCATAGACGAGCTAGCAG
TAGATACATTTACTATTTTGTTTCGGCTGCTGGATGGAACGCATCGGCCATTTCGATGGCGCTGACAAGCTTTGGCTTTG
CCCGTGCATGCGATGCAGCTCCGACCGCAGCCAAAGGCTCCAGTTGCGTGGTCTTCTAGGCACTTCCACCCACCGGCGCC
CGTCCGGTTTTCACACGCGGCGGCTGCTCCGGCCTGCTGACCTGTGGGCTCCTCCATCCCATCCCGGCGACGAGTCACCC
GGCCGTAACCCGGCCCACGTGTACCGCTGCGGCGATCCACGTCGACGCCCCGCAGCACGGGCTCTCCCGCTGGCTCCCGG
GGCCCGCACCCCGCCTCCTCGTTGCACGAGCCCGTCGCACTGCATGCTGGGCGCCGCACGCGGCGGCTCCACGTGTCCAC
GCCCCCGCTGCTGCGTGGAAGGAATAGAGGCCTCCCTGTGCATACGCGCGACGTGGCCGCGCCGGACGGGCCAGATGCTC
CCCATCCGGCCGCAGAGGCGCCGGTGCACGGTACCACCTGTCCGAGGCCCTCGCGCCGCCTCCGGGGAGAGGATATTTAA
AGCGGGGGCAGGGGCCCCGCCGTACTCTCGCTTGGCACCGCTCTCCGCCTTGCGCTCGAGATCTCATCCCATCCTCGCCG
--CCCCACCCATGCCGACTGATCACGGCGGCAGCAGCGACGGCGGCCACCAGGCGCAATGTCGGCACAGGGGCGCCAGCG
TCGACGTCGAGCTCCGCGCCGCCATGGCGCTGGCCGACATGGCGGGGGCCGGGGCCGGGGCGGCCGCCGACCACGCGCTC
CCGGCGCAGCACCTGCGCCACGCCGCCGCCCCAGCTGCTCAGGTAATCGATTTCGCCGATTAGGTAGCTGGCCCTGTTAT
GGTTTTCGGTTTGGAAGGACTTCGATTGATTTGGCCGGCCGTGCGTGGGTAGCAGGCGGCGATGGAGCAGGAGGACGAGG
AGCTGGCGAGCACGAGGCTGAGCCTTGAGCTGGGCAACGTCGGCATCCAGTCCTCCCCTTGCTCCAGCAGCTCCAGCGGC
GCCGGGCAGCAACCGCCGCAGTCGTCCGCGGCCGTGACGGGATACGGCCTCAGCAGACCGCGGCACATGCTCACCGAGG-
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------CAGAGAAGGAGGCGAAGCG
GCTGCGGCGCGTGCTCGCGAACCGGGAGTCCGCCCGGCAAACCATCCTCCGCCGCCAGGTGATTAATCGCTAGCTAGCTC
C-ATCCATGTGCAAATTAATTACCACCACAGCTGCCGTGGCATCAACCGTGTCTGATTATTCTGACACGATTCGCGCCGT
GTCGTCGTGTCCAGGCGATCCGGGACGAACTGGCGAGAAAAGTCGCGGATTTAGCGTCGCAGAACGAGAACATGAAGAAG
GTACTCTAATTAAGCAGCATCATGTGTATTCCTGGAGGATCTTGAAATGTCAGATCACCATCAAGTTGCTTAATTAATCC
CGAATGGTGCAGGAGAAGGACATGGTGCTGGAACAGTACCTCACGCTCAAGGAGACGAACAAGCAGCTGAAACAACAGGC
ACATCATCTATCGCTTTCATTCCTTTAATTTCCTTTCCTTTTCCCCG---TCCATTATTAGTACTCCCCCTGCTACCACC
ATTGTTAGGCAACGGAAAAGAAAAGAAAAGAAATCCCAGAAGGGAACCTAGTATGTTCCAATCCAGCTCCAGTTGTGCCC
CCATGAGAGGACTACAGTCA--CGCTGCAGTACACCTATGCTAGT-----TACTAATTATGGTCAAACCGGGGGCCTGTC
AATCGCTCATGTCTGTATATTATTTACATTTCGCTCTGACAGTGATGTCCGGACAATAATATACTCTATGTGCCCTCCCT
TCTGTATTTGTCTTTTGCTTCTTTGGGTATGTGCTTGCTTTCTCGGCACCAACACATGCGTGTGCGCAAACTTGCTGATG
CGTCCGCATATCTGTCCAGCCGGGTGGTCGGCCTAGTCGGTTCCGCGATCGGGATCCGGTGGAGGATTGCGGCACGGGTT
TGGGCGTGCTCCTGCAGGTAGCGGCCATGTGTACGTACGTAGCTCGGTGCATCATTGACGGACAGGTGACGATCCGCGGT
TGGGCAAGCGGCCAAACAGCATCGCGACTTCAGATCGATCTCGGCCTGGGAGGCTATTGTATTCGGTCTGGATAAACTCT
GG-GGCGAGCTAGGCGGGCGTCCACCCTTCGCGAAATTTCCATGGATGTGGTGACACGGTGCACCGGATCAAACCGGCAG
GATGCTGATAGAATCTCGGCAAACTTCGTCACGGGTGTCTCTTTAATTTAAAGTCTAAACCAAGAAACGGAACCAGTCCA
TTCTAGAATTATTATTTGGATTTTCTTTT-----AAAAAATCGACCGATCGGTGGAAACGCATGCCAGCCTCGCCATGCA
TGCGCCATGTCGGCGGTGGGGTGAGCCATACAAAATGTTGATGCCATGGCAATGGCATGCAGCAACGGTTGCACGCGGCA
ACAGTGGTTCCTCTGAACGATTCTTCATTTTTCC-----TCTTTCGACAGATCTGGAAACAGTGAAATTCGTTGAATATG
ATCGTTGCACGTTTCACTAGTCGGCGGGCAGCTGGCTCTTCATCAGGCACTAACAATAATAGTTAAACAACATGCGTTCG
CCAAACGGAACACTAGTTTTCTCGCTACGTAACTGTGGAAGAACATGCGGAATCTTTTCTCGTGCCTGAACTTGTCACAC
GCAAAGTAAGT----------------GG----TAACTTTTTTGTCTGTCTTTGCAGGTGGCCAAGACGACCAAGAAGAA
GCCATCGTCTACACCAGCGATCACGCCCATGGACATCGCGCCCCCGGCACAGAGCGCGGAGGCCACCCCGCCGCAGACGC
CACCGCAGCCAAGCTTCCTCTACAGCGCGCCGCCGACGTCCATGCCTGTGCCCTACGTCTGGGGCTCCTGGCCGCCGTGC
GGGCCGGGTGTTTACGAGCATGGCGGCAACCCGGCTGGCATGGCGGGACACGCCCCGCCGCCGCTCTGCGTCCCGCCGGC
CTGCGCGTGGTACTACCCCGTCGTTGCCGCTGCCACCGACCCCCGCGGCTCGCCGCCGGCCTACGTGCAGCCGTTCCAGG
AGCCGACAGGCAGTGGCGGGACGGCCGGGGAGGACACCGACGACGACCCTTGCTCGCTGACCCTCGCCATCGATGCTGCC
GACAAGAAGAGCCCCGCCGCCTGCCCCAACGCTTACCAAAGTGGCAGCGGCGTGGTGGGGGCAGTGGGGCTGCAGGTCGC
GCTTAGCGGCAGAGAGAAGGCGGCGACGGCGGCGGAGGCGAGGAAGAGGAGGAAGGAGCTCACCAAGCTGAAGCAGATGC
ACGCCGGAAGCCGCCATGGCGCTGGCGAGCACTGGTGAGTGAGCTGCTAATCATGGCAGGTTACTAGGTGATCGAGGACG
CATGCATGCATGGCACTACTGCCGCTGAGTCACTGACAAGGCATCGGTGATCAACTGATGATGACGATTGGTTCCTTGGA
CGCAAGCAACAGCACTGATATTAGTACAGCTCCTACCAAT-TTTCTAATGTTCTTAATATTTGCATCTCGTTTGTCTAGG
AACGTAGGTTTGCATTTCAGTTACGCCCCAAGGCACTGAAGAAATGTATTCGGTTTTGTTTTGAGATTCTTTGGTGCAAT
CTGTAACCGGGTAAATAACTAGTGGTCCGATTATGTATAGCACCGGAGCTGTGCGTAATGTAACGATTCTTTACGTCCCA
GTAGCATATTTTT---------GTACCACACACAACAAAGTAAATCAAGCGAAGTAAGGA--ATATCTATTCTCGTTGTC
CTAACATGGCTCGTCACCTAAACTTGAATCTGAAATATACCGGG-ACTT-AGAGTAACTCTAGCAGATTCTCTAGTAAAC
AGTCTTACTAAGTCTC--------------------------------AGTCAATGCTATATACACGAGATCTTTAAGAT
TCGTG---------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------
>SNPs
----------------------------S-----------S-----------S---------------------------
S------------------------------------------------S------------------------------
--------------------------------------------------------------------------------
-SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS-----
------------S----S-------S------SSS----------S------S---S-----------------------
--------------------------------------------------------------S-----------------
--------------------------------------S----SSS--------S-------------------------
------------------------------------S-------------------------------------------
---------------------S-----------------------S----------------------------------
------------------------------S-----S-------------------------------------------
--------------------------------------------------------------------------------
---------S----------------------S-----------------------------------------------
----S---------------------------------------------------------------------------
-S------------------------------------------------------------------------------
--S---------------------------------------------------------S-------------------
----------------------------------------------S----------------S----------------
--------------------------------------------------------------------------------
------------------------S-------------------------------------------------------
--------------------------------------------------------------------------------
----------------SS-----------------S---------------------------S----------------
----------------------S----------------------------------------------S----------
-------------------S--------------------------------------S--S------------------
--------------------------------------------------------------------------------
-------S---------SS------------SSS-----------------SSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSS------------SS----------S--------------------------------------------
------------------------------------------------S------------------S------------
-------------S-------------------------------------------S----------------------
--------------------------------------------------------------------------------
-----S-------------------S-----S------------------------------------------------
S-------------------------------------------------------------------------------
------------------S-----------------------S------------------------------S------
--------------------------------------------------------------------------------
---------------SSSSSSS------------------------S-S-------------------------------
------------------------------------S-------------------------------------------
-------------------------------------------------S------------------------------
-------------------------------S------------------------------------------------
-----S--------------------------------------------------------------------------
---------------SS---------------------------S---------------S-------------------
S-S-----------S----------------------------------S---S--------------------------
-----------------------------S------------SS------------S----------------------S
-----------------------------SSSS-----------------------------------------------
-----------------------------------------------------------------S--------------
--------------------S-----S-S-------S-------------------------------------------
--------------------------------------------------------------------------------
---------S-----S-------S--------------------------------------------------------
------------S----------------SSSS-----------------------------------------------
---------------------------------------------S----------------------------------
--------------------------------------------------------------------------------
--S--------------------S---------------------------------S----------------------
------------S------------------S------------------------------------------------
-------------------------------------------------------------------------S------
---------------------S--------------------S-------------------------------------
---------------------------------S-----------------------------------------S----
---S----------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------S----------------------------------------------------S-----------------
--------------------------------------------------------------------------------
------------------------------------------------S-------------------------------
-S------------------------------------------------------------------------------
-------------------------------------------------S-------------------S----S-----
-------S-------S------------------------------------SSS-S-----------------------
--S-----------------------------------------------------------------------------
-----S--S-----S----S-----SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS----------
-----S---S----------S--S-S---SS-----------------------------------------------S-
----S------S-S--------------------SS-----S--------------------------------------
--S---S--------SS---------SS--S------S-----------S---------------S--------S----S
--------------------S-----S----------S-S---S-----------------S-SSSS-------------
------SS-----------------------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
>forward_686
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------CAGATTGGGGACGACGAGAG----------------------------------
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>reverse_2298
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---------------------------------------------------------GATTCTGACACGATTCGCGC---
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>forward_1872
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------------CACTTGCTACGTTGCATCGG------------------------------------------------
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>reverse_3136
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---------------GGAGCATCGCGACTTCAGAT---------------------------------------------
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>forward_2739
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-------------------------------------------------------------------------------C
CCACGAGAGGACTACCAGT-------------------------------------------------------------
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>reverse_4262
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---------------------GGTCCCAACGCTTACCAAAG---------------------------------------
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--------------------------------------------------------------------
>forward_3181
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-----------------------------------------CGGTCTGGGAGGCTATTGTG-------------------
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>reverse_5316
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-----------------------------------TGATCCCGGCCAATTTAGGG-------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------
