>input_sequence_20834
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--------------------------ATGGATCTGTCCACAACCTCTGTTATGGCGGCTAAGGCCTACTCGTACAAAGCA
GAGTCACTGGTTAAGGAATACCTTCTTGCAGATGCATATGTTTCGTACACTGCTATGCTTGGTGGGATCCTGATGTGCAA
GATGGTATTATTTTGCCCCCCTCTTATTTGTTGACATTTACGATCATGTCACCAGTGAATTTAGTGATGCTCACATGATT
CATGTATTTAGATGGAAGAAACAAATAGATGTTAGTTTTATTGCATTTTTGCTTAACTTCACTATGTGAAAATTGTGGAC
TACCGAACACCATTTGTACTATATA-------------------------------------------------------
--------------------------------------------------------------------------------
------------------------T--GGCTGTTAGTATAAGCAGGTTTCTGTAAAGAACTAATGTAGGAT-TGCAAATT
CTCAGTTTAGCCTGAGA--------TCTAATTAGGAATATGTCGATGGCTACCCACCACATCCGATCCTAAGCCGCGGAT
GCATCTGAAATCGGTTGAAGTAATGTAAGGTTTAAACTCACATACAAGCTGTGATGAATTTTCAGATTAGAGTCATGCAA
TAGATTTAACAGTTTGTTTTGGCTTGTAACGTTTTTGTTTTTGTTTAGTATGAGCAGTTAA-------------ATTCGG
ATACTCAATACAAGATTTTCAAAACCAAGCATGTTACGGTTTAGCAAACAAAAATTAACCTAATCCTATCAATA---TAT
TAACCATTTTTAATCAATATTTGGCTACCATGGGAAACAGAAGTTGAATCACAATGTATATTTGTTTTTAATCTGTATTA
TACAGGTTGGCCTCAGTGTATTACCATATATGTTTAATACCGCAATAATTTCCTATTATTTGCCCTTTGTGTGTGTCTGT
GTATGCCAGGATCCCTTACAATACCTTGTGTACCATTTGTATCCTTTAGGCAATAGTGG---TATGTATATGTAGTAAGT
TATTAACTATTCTGCGAGAATGGCGTTTTGGCTTTCGGCCTCCAAGGAGGCCGATTTAAAAAAAATCAAAAAATTACGTA
TGTGCGACGTATGTGCGTAAATTTTTTTTGTACAAGTAAACAAGGATGTGAAACGTATGTGCGTAAAATTTCAGGATGAA
ATACGTTGAAAAGCGACCTGTACAAAAAAGACAAATTCATGGTCTGAGAAGATGAATAGTACCATGTTTAAAAAGCCCCA
GATTTGTCTTCTTTGCACAGCCCTCATTTCAACGTATTTCATCCTGAAAATTTACACACTTGTGCACTATGCCTTCATCT
ATCTCTGTATTGTTTTCAAATTTTTTTGAAATGTAAAAATATGAATTTTCATGATTTTTGAATTTTGCATTTGGAGGCCT
CCATGGAGCTCGGCCTCCAAAAGCAATTTTCACTATTCTGCGATGTAACAAAGTAGATAGCAGCATGCAGATGATAATCA
TCACTTCTAGCATTGTTTTCAGAGTTTGACTTTTCAAAACCCTTTGCACTATCCACACTGCA-----ACCTATGATTTTC
TCTTGTTTTATTTTACATTTATGTTAACCCTGAAATTCTTGCATGGAACAAGTTATGATTGATCTCTATGTACCAGAACT
CTAGCTACTTTCTTGGCTACAAATTTCCTTTTGGTTTGCAGATCTATGACATCACACACTTAGTCAGTTCATTCTTCTAC
AAGTGTTATGCTTCTCTTACAAAAGCCCAAAAGCTTGAGTGGAACAACAGGTGAAGCCATCTGTCTGCAAAATTTATGTC
CAATTTCACCATGTGCTTATTGACATATCTACTCACGACCGATCTTTTACCTATTCTAGGGGCATCTCCACTGTCCATGC
AATTTTCATCACATTCATGTCAGTGTACCTAGTATTCTTTTCCGACCTATACTCTGATAAGTTGGATGGACCAGTAACTT
TCCGGAGTTCAAACCTCTCTAATATTACACTAGCGGTAAAG---TACTATTTTGTTCCCATTCAAGAAATGACTATGTTG
GCATGCATTGTCTATTTGCCTCATATCGGCTTAATTTCATTTGTCCAGGTATCTGTTGGGTACTTCATCACTGACATTGC
AATGATATTTTGGGTTTATCCTTCTCTAGGTGGAATGGAGTATGTAAGTGCCCTTATGTGATATTTCTGGGTTGCATCCT
TGACACACGTGTTAATATTCATTGTATTTGTTCAATTATCATTGCTGCATTTTTTGTATG-------TATTATTCATTAC
GGGTTGATCATTGCCAGGTTCTTCATCACTTCCTGTCACTTGTTTCCATAGTCTATTCTGTGAATTCTGGGGAAGGCCAG
TTGTATACATACATGGTTCTCATCTCTGAAGGAACCACACCTGGAATCAACCTCCGCTGGTATTTGATTTGATTCAATGA
ATGCACAATATTTCTGGGTCATTATTGTTATTTCATTCGATCTGATCTTTCCTGTTACCTTCTGTTATGAAGGTATCTTG
ATACTGCTGGACTGAAAAGATCCAAGGCCTATGTTGTGAACGGTAGCTTAATGGTTGTTGCATGGCTGGTAAGTGGAAGT
TTCTACAAAGTAGTTATAGAATGCACGTTATTTTTCACGCAACTGACCACAAGTTAATTAGTCCTCACTCTTCAGTATGC
CTCAATGTGTGCATACATGAATGAGCATTTCAAATTGTATACCCAGTTCAAAAAAATAATTTTGT----TGAATTTGCTT
CAAGCTAAGGTTTGTCAACTGTTTTATACACTCTATTCCACTATTCCCTTTTAAAAATTGCAGCTAGTGGAATACCTCAA
GCTT---TGTAATAGATGGTTTTTTGTATTATGTTTGTGTTCTGTATAACTCACATTGGACATTTGCTAACTCGGCTTGG
GGAATGGGATACAGTATTAGCAATTGGTCTTGTGATTTAC-AGAAACTTATCGTACAAGTTGAAATATTAATGCTATTAT
ACCCCCAGATGTTTCTGTGCCGAGGCCATGCTGTAATTTTAGTTTAACTATGCTCTCTTCAGTAGGTTATCCCTAGGTTC
TTTGGTTTTGTCTTTGGTTTTTGTTTCTTGCTAGGCCCTTG-TGTGTTCCTGTTTCTGATTCCA--T----TTTTTTCTT
TTGGCTTGCTTTACTTTGGTCATGCTTTACC-------------------------------------------------
----------ACAATTTTCTCTCTAACATAGTCAACCATTTGTGTAATACAGGTGGCACGGATAATTCTCTTCATCTACT
TGTTCTACCACATCTACTTCCACTATGATGACGTAATTCCTACTTCTGTTCCAGCACATAACTATGTGGCAAATATCACA
TCGATGATTCTGACACTAAGTTTGATCTGAATTATTGACAGGTGATGCAGATGCGGACCTTCAGCCGCGTTCTGATATTT
GGCGTGCCCACAATACTACTCATCATGAACACGATATGGTTTGCAAAGATCTTGAGAGGCCTTAAAAAGACGCTAACCAA
GAGGGAGTGA----------------------------------------------------------------------
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>chr3A_1_TraesCS3A01G298600
TTTTTCGCCGTTTCCTCGGATTTTTGGTTTCGGTTATTATCGGTCGCGCGCGGCGGCGTGCCTGCCTTCCGGGACTCGGG
GCT-GTTTCCTTTTGATCGCTGTGGTGTTTTCTTCCGGGCGACGGCGCGTGCCATTGTCGTCCGGGCATCGATTCGGTGC
CCCAATTGGTCGCAACGTGCGGATGTTTTTT--TCCGAGCTGGCGGTTTGAATGACGCCTCAAAAGGTTGCCCCTCTTGC
GCACCTTTTCCGACCCCCATCCCCTGTATTCATCTTGACTCCTTCGTGCGCTTTGTGCGTTGCCTTATTTAGTCAGGTTT
GTGGACGTATCTTCTCCGTGTTACTCATCTTCGAGTACCATTTTCCTGCGAGTTG-TGCGCGTGATTACAAGTGCCACAC
GCTGTTATGAGTTGTTTTGGATTCGATACATTCTCCAATATAGT------------ACCTGAATTTTAGTGTTTAGAGGG
ATGGCTGTCAAGCATGCAATTAGCTGCTATCGTTTTGGATTCGTAGCTGTTTAT--------GGGGACCTCAATGACTAT
CTTACTTAAACTGTGGCTCTAGCAATTGTTAATAGGATCCATTCATTGGCTTCGGCACTACGTCGTTGCTTTATTCACAG
CTTCCAGTCTTCC--------------AGTATAGAGTATAGACTCAATCTTTGGTGCATGCTTCTGCTTGCTATTTTATT
CTGGTGAAAGTGACACATGACAGGGATTGATTATTTATTTGGCTTCA------------------------GCTTCTTCA
TGTGGTCGGATTCGTGTACTTTACCATTATGCATTCAAGTGACAGTTGGGTGTTGTACTTCATGGAATGGAAGACTATTC
CGAGTACTGTTTAGCAATGACCCATATCTT-GGTTCTTCTTCTACGGTCAACTGGATGTCACA--AAAACTATCTTTAAT
CTTAGCGTGGGCATTTTATAATTCTGGCTTCTCTATGGCTCAAAATGTACCTTGTTATGTGACTT-GTCTCTTTCGTCAG
GCTGCTGAGTCAAGATATAGGAATTGATGGATCTGTCCACAACCTCTGTTATGGCGGCTAAGGCCTACTCGTACAAAGCA
GAGTCACTGGTTAAGGAATACCTTCTTGCAGATGCATATGTTTCGTACACTGCTATGCTTGGTGGGATCCTGATGTGCAA
GATGGTATTATTTTGCCCCCCTCTTATTTGTTGACATTTACGATCATGTCACCAGTGAATTTAGTGATGCTCACATGATT
CATGTATTTAGATGGAAGAAACAAATAGATGTTAGTTTTATTGCATTTTTGCTTAACTTCACTATGTGAAAATTGTGGAC
TACCGAACACCATTTGTACTATATA-------------------------------------------------------
--------------------------------------------------------------------------------
------------------------T--GGCTGTTAGTATAAGCAGGTTTCTGTAAAGAACTAATGTAGGAT-TGCAAATT
CTCAGTTTAGCCTGAGA--------TCTAATTAGGAATATGTCGATGGCTACCCACCACATCCGATCCTAAGCCGCGGAT
GCATCTGAAATCGGTTGAAGTAATGTAAGGTTTAAACTCACATACAAGCTGTGATGAATTTTCAGATTAGAGTCATGCAA
TAGATTTAACAGTTTGTTTTGGCTTGTAACGTTTTTGTTTTTGTTTAGTATGAGCAGTTAA-------------ATTCGG
ATACTCAATACAAGATTTTCAAAACCAAGCATGTTACGGTTTAGCAAACAAAAATTAACCTAATCCTATCAATA---TAT
TAACCATTTTTAATCAATATTTGGCTACCATGGGAAACAGAAGTTGAATCACAATGTATATTTGTTTTTAATCTGTATTA
TACAGGTTGGCCTCAGTGTATTACCATATATGTTTAATACCGCAATAATTTCCTATTATTTGCCCTTTGTGTGTGTCTGT
GTATGCCAGGATCCCTTACAATACCTTGTGTACCATTTGTATCCTTTAGGCAATAGTGG---TATGTATATGTAGTAAGT
TATTAACTATTCTGCGAGAATGGCGTTTTGGCTTTCGGCCTCCAAGGAGGCCGATTTAAAAAAAATCAAAAAATTACGTA
TGTGCGACGTATGTGCGTAAATTTTTTTTGTACAAGTAAACAAGGATGTGAAACGTATGTGCGTAAAATTTCAGGATGAA
ATACGTTGAAAAGCGACCTGTACAAAAAAGACAAATTCATGGTCTGAGAAGATGAATAGTACCATGTTTAAAAAGCCCCA
GATTTGTCTTCTTTGCACAGCCCTCATTTCAACGTATTTCATCCTGAAAATTTACACACTTGTGCACTATGCCTTCATCT
ATCTCTGTATTGTTTTCAAATTTTTTTGAAATGTAAAAATATGAATTTTCATGATTTTTGAATTTTGCATTTGGAGGCCT
CCATGGAGCTCGGCCTCCAAAAGCAATTTTCACTATTCTGCGATGTAACAAAGTAGATAGCAGCATGCAGATGATAATCA
TCACTTCTAGCATTGTTTTCAGAGTTTGACTTTTCAAAACCCTTTGCACTATCCACACTGCA-----ACCTATGATTTTC
TCTTGTTTTATTTTACATTTATGTTAACCCTGAAATTCTTGCATGGAACAAGTTATGATTGATCTCTATGTACCAGAACT
CTAGCTACTTTCTTGGCTACAAATTTCCTTTTGGTTTGCAGATCTATGACATCACACACTTAGTCAGTTCATTCTTCTAC
AAGTGTTATGCTTCTCTTACAAAAGCCCAAAAGCTTGAGTGGAACAACAGGTGAAGCCATCTGTCTGCAAAATTTATGTC
CAATTTCACCATGTGCTTATTGACATATCTACTCACGACCGATCTTTTACCTATTCTAGGGGCATCTCCACTGTCCATGC
AATTTTCATCACATTCATGTCAGTGTACCTAGTATTCTTTTCCGACCTATACTCTGATAAGTTGGATGGACCAGTAACTT
TCCGGAGTTCAAACCTCTCTAATATTACACTAGCGGTAAAG---TACTATTTTGTTCCCATTCAAGAAATGACTATGTTG
GCATGCATTGTCTATTTGCCTCATATCGGCTTAATTTCATTTGTCCAGGTATCTGTTGGGTACTTCATCACTGACATTGC
AATGATATTTTGGGTTTATCCTTCTCTAGGTGGAATGGAGTATGTAAGTGCCCTTATGTGATATTTCTGGGTTGCATCCT
TGACACACGTGTTAATATTCATTGTATTTGTTCAATTATCATTGCTGCATTTTTTGTATG-------TATTATTCATTAC
GGGTTGATCATTGCCAGGTTCTTCATCACTTCCTGTCACTTGTTTCCATAGTCTATTCTGTGAATTCTGGGGAAGGCCAG
TTGTATACATACATGGTTCTCATCTCTGAAGGAACCACACCTGGAATCAACCTCCGCTGGTATTTGATTTGATTCAATGA
ATGCACAATATTTCTGGGTCATTATTGTTATTTCATTCGATCTGATCTTTCCTGTTACCTTCTGTTATGAAGGTATCTTG
ATACTGCTGGACTGAAAAGATCCAAGGCCTATGTTGTGAACGGTAGCTTAATGGTTGTTGCATGGCTGGTAAGTGGAAGT
TTCTACAAAGTAGTTATAGAATGCACGTTATTTTTCACGCAACTGACCACAAGTTAATTAGTCCTCACTCTTCAGTATGC
CTCAATGTGTGCATACATGAATGAGCATTTCAAATTGTATACCCAGTTCAAAAAAATAATTTTGT----TGAATTTGCTT
CAAGCTAAGGTTTGTCAACTGTTTTATACACTCTATTCCACTATTCCCTTTTAAAAATTGCAGCTAGTGGAATACCTCAA
GCTT---TGTAATAGATGGTTTTTTGTATTATGTTTGTGTTCTGTATAACTCACATTGGACATTTGCTAACTCGGCTTGG
GGAATGGGATACAGTATTAGCAATTGGTCTTGTGATTTAC-AGAAACTTATCGTACAAGTTGAAATATTAATGCTATTAT
ACCCCCAGATGTTTCTGTGCCGAGGCCATGCTGTAATTTTAGTTTAACTATGCTCTCTTCAGTAGGTTATCCCTAGGTTC
TTTGGTTTTGTCTTTGGTTTTTGTTTCTTGCTAGGCCCTTG-TGTGTTCCTGTTTCTGATTCCA--T----TTTTTTCTT
TTGGCTTGCTTTACTTTGGTCATGCTTTACC-------------------------------------------------
----------ACAATTTTCTCTCTAACATAGTCAACCATTTGTGTAATACAGGTGGCACGGATAATTCTCTTCATCTACT
TGTTCTACCACATCTACTTCCACTATGATGACGTAATTCCTACTTCTGTTCCAGCACATAACTATGTGGCAAATATCACA
TCGATGATTCTGACACTAAGTTTGATCTGAATTATTGACAGGTGATGCAGATGCGGACCTTCAGCCGCGTTCTGATATTT
GGCGTGCCCACAATACTACTCATCATGAACACGATATGGTTTGCAAAGATCTTGAGAGGCCTTAAAAAGACGCTAACCAA
GAGGGAGTGAAGAGGAGAAGAATAGCAGATGCAAGCTCATGGCGGCCCATCTACAAAAACCATCATCCTGCCTTACAGTC
ACATAAAACTACATATACTCCCCGAGCAAAACTAGATAGTGCGACTCGCAGCACAAGCTAAAATCCCATGTACATAATCC
AGAAGTATGCTTGAGCACGGCCTCAAATTTTCCACGGATATTCTCCGTCTTGTACATATACCGGTCTGGATATTGCTTAG
GAAGCTTCAAACTGCATGTGCATTGGATGCTTCTAAGCCCCCCTCGACCACTGACACTGAGATAGTCGTCGGTCATCAAA
AGTGACATTTGAAAGGTTGAAATCTGGCATCTGTTTTTAGTTACGAC---TTACGACTCTCAGGAATGTGAAAGCTGGTA
TTGTTCTTGACTTCT-GAATCTGAATTCTAATGTTTCATTCTCTTATCATTGCAAGGAAACCCTGCTCAATCTTGGTGTG
CAGCAGCAGCTCTGTAGCTGACTGTTTGTGATCACTACCATGTGTGAC---------CCCCTTTGATCTTTTTTCTATTC
ATAGGGCAAAATC--GTGTCA-ATTACAACAAGGAGCGCAAAACACAACCTATCTGGATGGCAGAAGAGCTGCTC-----
------------------CAGTTCTTTGT---------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------GTGATGAAGAAATGACGATTATTTCTTTACTTTTGCGATGAACAGATGATTATTCTG
CATACAAAGTGCACATAATTTTCACTTTCTGCATTGCATTCAGGTGGTATAAAATTGCCTGTGG----------------
-------GTGTGTGTGTGTGTGTGTGTTACGTGAGGCTACGGCTAAGCAGGCCCTGAAATGAGAGGAGGAGGTCCTTGTT
TTCTGCGCCGAAGATCTGGTCTGCCTTTTCGAGGGTCTCCTGCACCACCACAC---CAATATAGTATAAGTATACCTCAA
GATCTGTATCCGAAAGAAACCACAAATACAGCTGGAAACTGAAAGTGAGG------------GTTACCTCTTGGGATTGC
CTGTGAGCGTTGAGCTCCTTGATGTTGGCGAGGAAAGCAGC
>chr3D_1
TTTTTCGCCGTTTCCTCGGATTTTTTGGTTTCGG--TTATCGGTCGCGCGCGGCGGCGTGCCCCGAGTCCCGGAAGGCAG
GCACGTTTCCTTTTGATCGCTGTGGTGTTTTCTTCCGGGCGACGGCGCGTGCCATTGTCGTCCGGGCATCGATTCCGTGC
CCCAATTGGTCGCAACGTGCGGATGTTTTTTCTTCCGAGCTGGCGGTTTGAGTGATGCCACAAAAGGTTGCCCCTCTCGC
GCACCTTTTCTGACCCCCATCCCT--------TCTTGATTCCTTCGTGCGCTTTGTG---------------------TT
ATGGACGTATCTTCTCCGTGTTACTTATCTTCGAGTACTATTTTCCTGCAAGTTGTTGCGCGTAATTACAGGTGCCACAC
GCTGTTATGCGCTGTTTTGGATTCCATACATTCTCCAATACAGTACATGTCGCCCCACCTGAATTTTAGTGTTTAGAGGG
ATGGCTGTCAAGCATGCAATTAGCTGCTATCGTTTTGGATTCGTAGCTGGCTCCATGTTGACGGGGACCTCAATGATTAT
CTTACTTAAACTGTGGCTCTAGCAATTGTTAATAGGATCCATTCATTGGCTTCGGCAGTACGTTGTTGCTTTATTCACAG
CTTCCAGTCTTTC--------------AGTATAGA-------CTCAATCTTTGGTGCATGCTTCTGCTTGCTATTTTATT
CTAGTGAAAGTGACACATGACAGGGATCGATTATTTATTTGGCTTCAGTGTCGCATTTTAAGACATGGATGGCCTCTTCA
TGTGGCCGGATTCGTGTACTTTACCATTATGCATTCAAGTGACAGTTGGGTGTTGTACTTCATGGAATGGAAGATTATTC
CGAGTACTGTTTAGCAATGACCCATATCTTTGGTTGTTCTTCTA-GGTCAACTGGATGTCACA--AAAACTATTTTTAAT
CTTAGCGTGGACATTTTATAATTCTGGCTTCTCTATTGCTCAAAATGTACCTTGTCATGTGACTT-GTCTCTTTCATCAG
GCTGCTGAGTCAAGATATAGGAATTGATGGATCTGTCCACAACCTCTGTTATGGCGGCTAAGGCCTACTCGTACAAAGCA
GAGTCACTGGTTAAGGAATACCTTCTTGCAGATGCATATGTTTCGTACACTGCTATGCTTGGTGGGATCCTGATGTGCAA
GATGGTATTATT-TGCCCCCCTCTTATTTGTTGACATTTATGATCATGTCACCTGTGAATTTAGTGATGCTCACATGATT
CATTTATTTAGATGGAAGAAACAAATAGATGTTAGTTTTA---CATTTTTGCTTAACTTCACTATGTGAAAATTGTGGAC
TACCGAACACCATTTGTACTATATA-------------------------------------------------------
--------------------------------------------------------------------------------
------------------------TATGGCTGTTAGTATAAGCAGGTTTCTGTAAAGATCTAATGTAGGATATGCAAATT
CTCAGTTTAGCCTGAGA--------TCTAATTAGGAATATGTCGATGGCTACCCACCACATCCGATCCTAATCCGCGGAT
GCATCTGAAATCGGTTGAAGTTATGTAAGTTTTAAACTCACATGCAAGCTGTGATGAATTTTCAGATTAGAGTCATGAAA
AATATTTAACAGTTTGTTTTGGCTTGTAACGTTTTTGTTTTTGTTTAGTATGAGCAGTTAAGTTCTTCAGTAAAATTCGG
ATACTCAATACAAGATTTTCAAACCCAAGCATGTTACGGTTTAGCTAACAAAAATCAACCTAATCCTATCAATATAGTAT
TAACCATTTTTAATCAATATTTGGCTACCATGGGAAACATAAGATGAATCACAATGTAAATATGTTTTTAATCTGTATTA
TACAGGTTGACCTCAGTGTATTACCATATATGTTTAATATTGCAATAATTTCCT-TTATTTGCCCTTTGTGTGTGTCTGT
GTACACCAGGATCCCTTACAATACCTTGTGTACCATCTGTATCCTTTAGGCAATAGTGGTACTATGTATATGTAGTAAGT
TATTAACTATGCTGCAATGTAC----------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
---------------------------------------------TAACAAAGTAGATAGCAGCATGCAGATGATAATCA
TCAGTTCTAGCATTGTTTTCAGAGTTTGACTTCTTAAAACCCTTTGCACTCACTCACCCACGCTACCACCTATGATTTTC
TCTTGTTTTATTTTACATTTATGTTAACCCTGAAATTCTTGCATGGAACAAGTTATGATTGATCTCTGTGTACCAGAACT
CTAGCTACTTTCTTGGCTACAAATTTCCTTTTGGTTTGCAGGTCTATGACATCACACACTTAGTCAGCTCATTCTTCTAC
AAGTGTTATGCTTCTCTTACAAAAGCCCAAAAGCTTGAGTGGAACAACAGGTGAAGCCATCTGTCTGCAAAATTTATGTC
CAATTTCACCCTGTGCTTATTGACATATCTGCTCACGA-CGATCTTTTACCTATTCTAGGGGCATCTCCACTGTCCATGC
AATTTTCATCACATTCATGTCAGTGTACCTAGTATTCTTCTCCGACCTATACTCTGATAAGCTGGATGGACCAGTAACTT
TCCGGAGTTCAAACCTCTCTAATATTACACTAGCGGTAAAG---TACTATTTTGTTCCCATTCAAGAAATGCCTATGTTG
GCATGCATTTTCTATTTGCCTCATATCGGCTTAATTTCATTTGTCCAGGTATCTGTCGGGTACTTCATCACTGACATTGC
TATGATATTTTGGGTTTATCCTTCCCTAGGTGGAATGGAGTATGTAAGTGCCCTTATGTGATATTTCTGGGTTGCATCCT
TGACACACGTGTTAATGTTCATTGTATTTGTTCAATTATCATTGCTGCATTTTTGTATGTATTATTCTATTATTCACTAT
GGGTTGACCGTTGCCAGGTTCTTCATCACTTCCTGTCACTTGTTTCCATAGTCTATTCTGTGAATTCTGGGGAAGGCCAG
TTGTATACATACATGGTTCTTATCTCTGAAGGAACCACACCTGGAATCAACCTCCGCTGGTATTTGATTTGATTCAATGA
ATGCACAATATTTCTGGGTCATTAATGTTATTTCATTCGATCTGATCTTTCCTGTTACCTTCTGTTATGAAGGTATCTTG
ATACTGCTGGACTGAAAAGATCCAAGGCCTATGTTGTGAACGGTAGCTTTATGGTTGTTGCATGGCTGGTAAGTGGAAGT
TTCTACAAAGTAGTTATATGATGCACGGTA--TTTCACGCAACTGATCACAAGTTAATTAGTCTTCACTCTTCAGTATGC
CTCAATGTGTGCATACATGAATGAGCATTTTAAATTGTATAGCCAGATCAAAACAATTATTTTGTTATGTGAATTTGCTT
CAAGCTAAGGTTTGTCTACTCCTTTATACACTCTATTCCACTATGCCCTTTTTAAAATTGCAGCTAGTGGAATACCTCAA
GCTTCTTTATAATAGATGAAGTCTTTTATTGTGTTTGTGTTCTTTATAACTCACACTGGACATTTGCTAACTCATCTTGG
GGACTGGGATACAGTATTAGCAATTGGTCTTGTGATTTTAGAGAAACTTATCGT-CAAGTTGAAATATTAATGCTATTGT
ACCCCC-GACGTTTCTGTGCCGAGGCCATGCTGTAATTTTAGTTTAAGTATGCTCTCTTCAGTAGGTTTTCCCTAGTTTC
TTTGGCTTTGTCTTTGGTTTTTGTTTCTTGCTAGGCCCTTGGTGTGTTCCTGTTTCCGCTTCCTTTTTTGCTTTTTTATT
TTGGCTTGCTGTACTTTGGTCTTGTTTTGGCTTCATGTCATCGACCTGTTGGCTTACTCAGCAAGCCCTTCTGCTGCTTG
TGAAGTCTCTACAATTTTCTCTCTAACGTAGTGAACCATTTTTCTAATACAGGTGGCACGGATAATTCTCTTCATCTACT
TGTTCTACCACATCTACTTCCACTATGATGACGTAATTCGTACTCCTGTTCCAGCACATAACTATGTGGCAAATATCACA
TCGATGATTCTGAAACTAAATTTGATCTGAATTATTGACAGGTGATGCAGATGCGGACCTTCAGCCGCGTTCTGATATTT
GGCGTGCCCACAATACTACTCATCATGAACACGGTATGGTTTGCAAAAATCTTGAGAGGCCTTAAAAAGACGCTAACTAA
GAGGGAGTGAAGAGGAGAAGAATAGCAGATGCAAGCTCATGGCCGCCCTTCTACAAAAACCATCATCCTGCCTTACAGTC
ACATAAAACTACATATACTCCCCGAGTAAAACTAGATAGTGCGACTCGCAGCACAAGCTAAAATCCCATGTACATAATCC
AGAAGTATGCTTGAGCACGGCCTCAAATTTTCCACGGATATTCTCCGTCTTGTACATATACCGGTCTGGATATTGCTTAG
GAAGCTTCAAACTGCGTGTGCATTGGATGCTTCTAAGCCTCCCTCGACCACTGACACTGAGATAGTCGTTTGTCATCAAA
AGTGACCTTTGAAAGGTTGAAATATGGCATCTGCTTTTAGTTACGACGACTTGCGACTCTGAATGTG----AAGCCGGTA
TTGTTCTTGGCTTTCAGAATCTGAATTGTAGTGGTTCATTCTCTTATCATTGCAAGTAAACCCTGTTCAATCTTGGTGCG
CA------GCTCTGTTAG----------------------------------------CCCTTTGATCTGTTTTCCATTT
ATAGTGCAAAAAACAGTGTCTGATTACAATAAGGAGCGTAAAGCACAACCTATCTGGAACGCAGAAGAGCTGCTCCAGGA
TTTACGTTTTTACGCGTGCAGTTCTTCGTATGGTAAAGATTTTTTTTTTTCCAACCAGGCTCGCACCCCTTTCCATTAAT
TTTGCAATCAACGGAAATACATGGTCCAGTAGTTCTCTAGGTATCATACCCAAAATAAAACGACCACGAGACCCAAAATA
AGACTGAAAGGGGAGGAGCGAGCTGGAGCATCGACAGGAAACCCACCGCAGGAGGATCCTGAAACGGATCAACCGCCATG
GGACGAAAACCTGACGACACCGTATGATAAAGAAATGATGATTA-TTTTTTTCTTTTGCGATGAACAGATGATTATTCTG
CATACAAAGTGCACATAATTTTCACTTGCTGCATTGCATTCAGCTCATGATCAGCTGTGGTATATATTGGCGCAATAGCC
AACAGGTGTGTGTGTGTGTGTGTGTGTTACGTGAGGCTACGGCTAAGCAGGCCCTGAAAGGAGAGGAGGAGGTCCTTGTT
TTCTGCGCCGAAGATCTGGTCCGCCTTCTCGAGGGTCTCCTGCACCACCACCACAGCAATATAGTATGGTGTTACCTCAA
GATCTGTATCCGAAAGAAACCACGGATCGAGCTGGAAACTGAAAGTGGGGTGCCCGTTCCCAGTTACCTCTTGGGATTGC
CGGTGAGCGTTGAGCTCCTTGATGTTGGCGAGGAAAGCAGC
>chr3B_5
----TCGCCGTTTCCTCGGATTTTTGGTTTCGGTTATTATCGGTCGCGCGCGGCGGCGTGCCTTCCT----GGACTCGGG
GCT-GTTTCCTTTTGATCGCTCTGGTGTTTTCTTCCGGGCGACGGTGCGTGCCATTGTCGTCCGGGCATCGATTCCGTGC
CCCAATTGGTCGCAACGTGCGGATGTTTTCCG--CCGAGCTGGCGGTTTGAGTGACGCCGCAAAAGGTTGCCCCTCTTGC
GCACCTTTTCTGACCCCCATCCCT--------TCTTGATTCCTTCGTGCGCTTTGTGCGTTGCCTTATTTAGTCAGGTTT
ATGGACGTACCTTCTCCGTGTTACTTATCCTCGAGTACTATTTTCGTGCGAGTTGTTGCGCGTGATTACAGGTGCCACAC
GCTGTTATGAGTTGTTTTGGATTCGATACATTCTCCAATATAGT------------ACCTGAATTTTAGTGTTTAGAGGG
ATGGCTGTCAAGCATGCAATTAGCTGCTATCGTTTTGGATTCGTAGCTGGCTCCATGTTGACGGGGACCTCAACCATTAT
CTTACTTAAACTGTGGCTCTAGCAATTGTTAATAGGATCCATTCATTGGCTTCGGCAGTACGCTGTTGCTTTATTCACAG
CTTCCAGTCTTTCAGTATAGAGTATAGAGTATAGA-------CTCAATCTCTGGTGCATGCTTCTGCTTGCTATTTTATT
CTAGTGAAAGTGACACATGACAGGGATTGATTATTTATTTGGCTTCAGTGTCGCATTTTAAGACATGGATGGCTTCTTCA
TGTGGTCGGGTTCGTCTACTTTACCATTATGCATTCAAGTGACAGTTGGGTGTTGTACTTCAT-----GGAAGATTATTC
CGAGTACTGTTTAGCAATGACCCATATCTT-GGTTGTTCTTCTACGGTCAACTGGATGTCACACAAAAACTATTTTTAAT
CTTAGCGTGGACATTTTATAATTCTGGCTTCTCTATTGCTCAAAATGTACCTTGTTATGTGACTTTGTCTCTTTCATCAG
GTTGCTGAGTCAAGATATAGGAATTGATGGATCTGTCCACAACCTCTGTTATGGCGGCTAAGGCCTACTCGTACAAAGCA
GAGTCACTGGTTAAGGAATACCTTCTTGCAGATGCATATGTTTCGTACACTGCTATGCTTGGTGGGATCCTGATGTGCAA
GATGGTATTATT-TGCTCCCCTCTTATTTGTTGACATTTATGATCATGTCACCTGTGAATTTAGTGATGCTCACATGATT
CATGTATTTAGATGGAAGAAACAAATAGATGTTAGTTTT--TGCATTTTTGCTTAACTTCACTATGTGAAAATTGTGGAC
TACCGAACACCATTTGTACTATATACTCCCTCCGTTCCTAAATATAAGTATTTGTAGAGATTTCACTACGGACTACATAC
GGAGCAAAATGAGTGAATGTAAACTTTAAATGCATCTATATACATCCGTATGTGCTTCATAGTGGATTCTCTACAAAGAC
TTATATTTAGGAACGGAGGGAGTATATGGCTATTAGTATAAGCAGGTTTCTGTAAAGATCTAATGTAGGATATGCAAATT
CTCAGTTTAGCCTGAGAGGCTGAGATCTAATTAGGAATATGTCGATGGCTACCCACCACATCCGATCCTAATCCGCGTAT
GCATCTGAAATCAGTTGAAGTTATGTAAGTTTTAAACTCACATGCAAGCTGTGATGAATTTTCAGATTAGAGTCATGAAA
TAGATTTAAAAGTTTGTTTT-GCTTGTAACGTTTTTGTTTTTGTTTAGTATGAGCAGTTAAGTTCTTCAGTAAAATTTGG
ATACTCAATACAAGATTTTCAAAACCAAGCATGTTACAGTTTAGCTAACAAAAATCAACCTAATCCTATCAATATAATAA
CCAT--TTTTTAATCAATATTTGGCTACCATGGGAAACAGAAGTTGAATCAAAATGTATATATGTTTTTAATCTGTATTA
TACAGGTTGACCTCAGTGTATTTCCATATATATGTAATATTGCAATAATTTCCTTTTATTTGCCCTTTGTGTGTGCCTGT
GTATGCCAGGATCCCTTACAATACCTTGTGTACCATCTGTATCCTTTAGGCAATAGTGG---TATGTGTATGTAGTAAGT
TATTAACTATTCTGCGATGTAAA---------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------AAAGTAGATAGCAGCATGCAGATGATAATCA
TCAGTTCTACCATTGTTTTCAGAGTTTGACTTTTCAAAACCCTTTGCACTCACTCACTCACACTACCACCTATGAGTTTC
TCTTGTTTTATTTTACATTTATGTTAACCCTGAAATTCTTGCATGGAACAAGTTATGATTGATCTCAGTGTACCAGAACT
CTAGTTACTTTCTTGGCTACAAATTCCCTTTTGGTTTGCAGGTCTATGACATCACACACTTAGTCAGCTCATTCTTCTAC
AAGTGTTATGCTTCTCTTACAAAAGCCCAAAAGCTTGAGTGGAACAACAGGTGAAGCCTTCTGTCTGCAAAATTTATGTC
CAATTTCACCCTGTGCTTATTGACATATCTACTTA-GACCGATCTTTTACCTATTCTAGGGGCATCTCCACTGTCCATGC
AATTTTCATCACATTCATGTCAGTGTACCTAGTATTCTTCTCCGACCTATACTCTGATAAGCTGGATGGACCAGTAACTT
TCCGGAGTTCAAACCTCTCTAATATTACACTAGCGGTAAAGTACTACTATTTTGTTCCCATTCAAGAAATGCCTATGTTG
GCATGCATTTTCTATTTGCCTCATATCGGCCTAATTTCATTTGTCCAGGTATCTGTTGGGTACTTCATCACTGACATTGC
TATGATATTTTGGGTTTATCCTTCCCTAGGTGGAATGGAGTATGTAAGTGCCCTTATGTGATATTTCT--------TCCT
TGACACACGT--TAATATTCATTGTATTTGTTCAATTGTCGTTGCTGCATTTTTG---------------TATTCACTAT
GGGTTGACCATTGCCAGGTTCTTCATCACTTCCTGTCACTTGTTTCCATAGTCTATTCTGTGAATTCTGGGGAAGGCCAG
TTGTATACATACATGGTTCTCATCTCTGAAGGAACCACACCTGGAATTAACCTCCGCTGGTATTTGCTTTGATTCAATGA
ATGCACAATATTTCTGGGTCATTATTGTTATTTCATTCGGTCTGATCTTTCCGGTTACCTTCTGTTATGAAGGTATCTTG
ATACTGCTGGACTGAAAAGATCCAAGGCCTATGTTGTGAACGGTAGCTTTATGGTTGTTGCATGGCTGGTAAGTGGAAGT
TTCTACAAAGTAGTTATAGGATTCACGGTA--TTTCACGCAACTGATCACAAGTTAATTAGTCTTCACTCTTCAGTATGC
CTCAATGTGTGCATACATGAATGAACATTTCAAATTGTATAGCCAGATCAAAACAATTATTTTGTTATGTGAATTTGCTT
CAAGCTAAGGTTTGTCTACTCCTTTATACACTCTATTCCACTATGCCCTTTTTAAAATTACAGCTAGTGGAATACCTCAA
GCTTCTTTATAATAGATGAAGTCTTTTATTGTGTTTGTGTTCTTCATAACTCACATCGGACATTTGCTAACTCGTCTTGG
GGACTGGGATACAGTATTAGCAATTGGTCTTGTGATTTTAGAGAAACTTATCGTACAAGTTGAAATATTAATGCTATTGT
ACCCCCAGATGTTTCTGTGCCGAGGCCATACTGTAATTT-AGTTTAACAATGCTCTCTTCAGTAGGTTTTCCCTAGGTTG
TTTGGCTTTGTCTTCGGTTTCTGTTTCTTGCTAGGCCCTTGGTGTGTAACTGTTTCTGCTTCCGTTT----TTTTTTCTT
TTGGCTTGCTTTACTTTGGTCTTGTTTTACC-------------------------------------------------
----------ACAATTTTCTCTCTAACGTAGTCAACCATTTGTGTAATACAGGTGGCACGGATAATTCTATTCATCTACT
TGTTCTACCACATCTACTTCCACTATGATGACGTAATTCCTACTTGTGTGACAGCATGTAACTATGTGACAAATATCACA
TCGATGACTCTGAAACTAAATTTGATCTGAATTATTGACAGGTGATGCAGATGCGGACCTTCAGCCGCGTTCTGATATTT
GGCGTGCCCACAATACTACTCATCATGAACACGATATGGTTTGCAAAGATCTTGAGAGGCCTTAAAAAGACGCTAACTAA
GAGGGAGTGAGGAGGAGAAGAATAGCAGATGCAAGCTCATGGCAGCCCATCTAC-AAAAACATCATCCTGCCTTACAGTC
ACATAAAATTACATATACTCCCCGAGTAAAACTAGATAGTGCGACTCGCAGCACAAGCTAAAACCCCATGTACATAATCC
AGAAGTATGCTTGAGCACGGCCTCAAATTTTCCACGGATATTCTCCGTCTTGTACATATACCGGTCTGGATATTGCTTAG
GAAGCTTCAAACTGCGTGTGCATTGGGTGCTTCTAAGCCTCCGTCGACCACTGACACTGAGATAGTCGTTGGTCATCAAA
AGTGACCTTTGAAAGGTTGAAATCTGGCATCTGCTTCTAGTTACGAC---TTACGACTCTGAATGTG----AAGACGGTA
TTCTTCTTGACTTTCAGAATCTGAATTGTAGTGGTTCGTTCTCTTATCATTGCAAGTAAACCCTGTTCAATCTTGGTGCG
TG------GCTCTGTAGCCAACTGCTTGTGATCACTACCATGTGTGACGCACATGACCCCCTTTGATCTGTTTTCCATTT
ATAGTGCAAAAAA--GTGTCTGATTACAACAAGGAGCGTAAAGCACAACCTGTCTGGAACGCAGGAGAGCTGCTCCAGGG
GTTTATGTTTGACGCGTGCAGTTCTTCGT---------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------ATGATAAAGAAATGATGATTA-TTCTTTTCTTTTGCGATGAGCAGATGATTATTCTG
CATACAAAGTGCACATAACTTTCACTTGCTGCATTGCATTCAGCTCATGATCAGCTGTGGTATATATTG-----------
---------------GTGTGTGTGTGTTACGTGAGGCTGCGGCTAAGTAGGCCCTGAAATGAGAGGAGGAGGTCCTTGTT
TTCTGCGCCGAAGATCTGGTCCGCCTTCTCGAGGGTCTCCTGCACCACCACAC---CAATATAGTAC------ACCTCAA
GATCTGTATCCGAAAGAAACCACGGATCCAGCTGGAAACTGAAAGTGAGG------------GTTACCTCTTGGGATTGC
CTGTGAGCGTTCAGCTCCTTGATGTTGGCGAGGAAAGCAGC
>SNPs
---------------------------------------------------------------S------S---------
---------------------------------------------------------------------------S----
---------------------------------------------------S-------S--------------------
----------S------------SSSSSSSSS------S-----------------------------------------
S------------------------S------------S-------------------------------S---------
--------------------------------------------------------------------------------
-------------------------------------------------SS-SS----------------------S---
---------------------------------------------------------S-----S----------------
-----------S-----------------------SSSSSSS--------------------------------------
--S-----------------------------------------------------------------------------
--------------------------------------------------------------------------S-----
-----------------------------------S-------------------------------------S------
----------S-------------------------S--------------------------------------S----
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------S---------------------------S------------S--------------------------
----------------------------------------S---------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------------S---------------------
-----------------------------------------------------------------------S--------
---------------------S-------S-------------S---------------------------------S--
--------------------------------------------------------------------------------
---------------------------------------------S---------S------------------------
-------------------------------------------------------------S------------------
---------S-----------------------------SS-------------S-------------------------
------------------------------------S-------------------------------------------
-----------------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS-----------------------------------
---S----------------------------------------------SS-SSSS-SS--------------------
-------------------------------------------------------------------S------------
-----------------------------------------S-------------------------S------------
--------------------------------------------------------------------------------
----------S---------------------------------------------------------------------
---------------------------------------S---------------------S------------------
-----------------------------------------------------------------------S--------
---------S----------------------------------------------------------------------
S-----------------------S-------------------------------------------------------
------------------------------------------------------SSSSSS----------------S--S
-------S------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------S------------------------------
-------------------S-------S--SS--------------S----------------S----------------
-----------------------------------------S----S------S---S----------------------
----------------S---SS----------------------S-------S---------------------------
--------S---------SSS-S--S----S------------S------------------------------S-----
---S----------------------------------SS--------------------------------------S-
--------------------------------------------------------------------S-----------
-----S----------------------------------------------------S----S----------------
---------------------S--S-------------------------------------------------------
---------------------------S----------------------------------------------------
--------------------------------------------------------------------------------
-------------S-----S------------------------------------------------------------
-----------------------------------------------------------------------------S--
-------------------------------------------S------------------------------------
--------------------------S-----------------------------------------------------
--------------------------------------------------------------------------------
---------------S-----------------------S-----------------------------S----------
------S--------------------------S--------------------------S-SSSSSSSSS----S----
-------------SS------------S--S--S----------------------S--------S------------S-
--SSSSSS----------SS----S--------------------------------------------S-----S---S
----S------SS-------S-----------------S---S---------------SS--------------------
--------------------------S-----------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------S----S---------S-----S------S----------------------------
---------------------------S---------------S-SS-SSSS-SS--SSSSSSS----------------
--------------------------------------------------------------------------------
---------------------S-----S---------------------------------------SSSSS--------
-----------------------SS--S----------------------------------------------------
-----------------------------------------
>forward_272
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------------ACCCCCATCCCCTGTATTCA------------------------------------------------
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>reverse_2415
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--------------GCACAGCCCTCATTTCAACG----------------------------------------------
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>forward_618
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--------------------------------------CCATTCATTGGCTTCGGCAC----------------------
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>reverse_2569
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--------CTCGGCCTCCAAAAGCAATT----------------------------------------------------
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>forward_2434
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--------------GCACAGCCCTCATTTCAACG----------------------------------------------
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>reverse_3730
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-------------------------------------------------AATGGTTGTTGCATGGCTGG-----------
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>forward_2588
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--------CTCGGCCTCCAAAAGCAATT----------------------------------------------------
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>reverse_4075
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--------------------------------------------------------------------------GCTTGG
GGAATGGGATACAGT-----------------------------------------------------------------
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>forward_2589
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--------CTCGGCCTCCAAAAGCAATTT---------------------------------------------------
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>reverse_4159
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------------------------------------------------------------------------------AT
ACCCCCAGATGTTTCTGTGC------------------------------------------------------------
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>forward_4084
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-----------------------------------------------------------------GCTAACTCGGCTTGG
GGAA----------------------------------------------------------------------------
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>reverse_5744
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---------------------------------------------------------------GGTGTGTGTGTGTGTGT
GTG-----------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------
