>input_sequence_20480
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----------------------------------------------------------------ATGGGGGCGGGCGGGA
AGGGCTGGCCGGAGACGGCGAGCCGCGGGGTGAGGACGGCCTGGTTCATGGTGGTCATGGTGGCGTCGCTGCTCGTCGCG
TCGGCGCCCGTCGTGGTGGCCGCCGGCGACGTGGCCGTCACGCTCTGGCTCGAGGCGCGCCTCGGCTGCCCGCGCTGCCG
CGGCCTCCGGGACCACCTCCGGGGGTACGCCTTCCGGAGCTCGCTCGTGGACATACCGCTCCTCTCCGTCCTTCGCTCCT
TCGCCATCACCTGTAAGCTGCTCGCATTGCCTCCTTAATGCTGTTTTACTGCGCGAAACGGCGCAGGCGCTAGCAATCCT
GGGGAATCTGTGTCTGTCTGGGTCGTGGTTGCTTGCTTCCCCATCCCCCGAGCGTTTTTTC------TTTCA-----TTT
TCTTTGGACAATGAATGGAGTTTCGTTTGTCCTTGGAGCCTATTTTTGGGACTTTGAGCGCTTCGCTTAGGATTCTCCAT
ATTTTTTGCATTTATGTATGAGGATTTGGTCACCCGAAAGCTACATCTGTGCTTGTCTTCTTTCGC-----TTGGGGGAG
ACGATCAAACTTTTAATACTAGTGGAC---TAGTGGAAGTATAAGTGTCGCCTGTTACTCTTCAATTCTGTACTAGTATA
CCTATTTATTTAGTAGTTATAAACCGCGTCATTTGCTTAAGTCCACAGCTTGAAACTTGAAAGGCATTTGAAAATTTTAA
-------TACAGTCTACACCAGCCATCATCAGATTCCACTAACCTGCTAGTGTACTTGTGCAGGCGTATACCTCGTGTGT
GATACTTCTGGTCTCTCTCACGGCCCGTACCTTGGAACCACAACCTTCTGTTCCTTGGCTTCGCTGCTCATCTTGCTCAT
GAAGGCCTGCGTTTACAGTCCAGCTCAGGACATTGGGCCTGAGCTCTCGCCGTCATTGGCGGACCACAGGCTAAATATGA
AGAAGCTATGGGGAATGCCTGCGCTTTTCCTGTCATCCTTGATCTTTGCTCTCGGCCATTTTGTTGTCGCTTACAGAACG
AGCTGCAGGGCTCGACGAAAGCTGCTCATCCATCGCATTGACCCTGAATCGGTATGGCCTGTTCGCTTGAATCTCACTGC
ACATGACGGATTGCTGTTTCTGTTTGGTAT-------TTATATGGCCTTTTCTGCTCCCTTTTCAGATTCTGGCTTACAA
GAATGCCTTTCCTGGATGCTACAAGGTTCCTCGGTCGCCCACTCCGCACAGTGCGAAACTTTATTCAAGGAGCGAGAGCG
AGACAAAGAGAAAAACTCTTGTGCACGATGACAGGGATATTCCAATCAGTTTTCTTGCTGATAGTGATAGCATGTTCACT
GCTTGCCAGGGGATCACTGTACACTACAAAATGTCTGATCCATCAAGTTGCATACCTCCAGCTCCTGAATTGTTTCCAGA
AACTAATCATGATGCTGTTTCGTCAAGCATTTCTCCTAGAAGACAGAGGCATGAGAGCCCACCAACAGCTTCCTCGAGTA
CCCGTCGTCTTTTGCATAGGAGCTTTAGTCATCAGTACCACCAAACATCGTTATATGCACCATTGTTGGTAGAACCGCTG
ACCTCTCCAACGGTGTCAGATGGCATCCCCTTTCTCAGTCTCGACGACGACAGCTTACAGGTGTGTTCGAGACCTATGGG
CTTTGATCTCGAGGCTGGAGAGCACGGGAAATTTGCTGTTGTTTTGGTCCATGGGTTTGGAGGGGGAGTATTTGCATGGA
GACATGTTAGTAATTTGCTTGCTCGACAAGTGGGTTGCACTGTGCTGGCCTTTGATCGCCCTGGATGGGGGTTAACATCT
CGACCTCGCAGAAAGGACTGGGAAGACAAGAATTTGCCAAACCCGTACGAGCTTGAGTCACAGGTGATCCATCTTACCAT
CTATTCATAGATTAGGTCATAATCTGTTCTTAGGGTTGCATTATGTCACCTAAACTCCTAATTAAAGTCTAGCAAGTACC
AACACCAACAGCATTTACCTCAAAGTTGCAGAGCAAATTTATTAATTTATTTTCACTCAAGTGAAATATTTTTTT-AAAT
ACCTCCCCCCACAAAAAATTATGGCTAACTAGGTGAAATGTTGTCTTTTCCAAAATATTCTTTGTGATAGTTAATTTTAT
AG-TAAGTGCTATTGCCTGAATGCTTTTAGTTTCCACCCTCAGAGAGACATTTTATCTTGAGAATATTCTGTGTCATTGA
GAGTTTGTCTTGTCACTGCAACTTTAAATAAATTCACTTTGAACTACATAACCTT-------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------------------------TTCCTCTGT
ATTTCAAACAGCGTGATCATGTTTTAAAAACACCATTTTGTATGCCCTTGTGCAGGTTGATCTTCTGATTTCATTTTGCT
TAGACATGGGCTTGGGCTCGGTCATTTTAGTTGGTCATGATGATGGCGGCTTGCTGGCACTGAGGACCGCAGAAAAGTTA
CGTGCTTCTGGAGATTCTAGGAAGGTACAGTATTGTGACTTTTCTTCGTCCATTGTAAATCAGCAACT-TATCATAATTT
TTGGATGGAAGTTTGTCGTCGTTGTAATGATCATATTAAATTAAATATTCCCCTGTGTGTTCCCAGGTTGAAGTGAAGGG
AGTTGTTCTTATAGGCGTAAGCTTATCAAGAGAAGTGATTCCTGCATTTGCTCGTATACTCCTGCATACTCCTCTGAGGA
AAAAGCACATGGTGCGCCCACTTCTACGTACTGAAATCACTCAGGTGATCAATCGACGAGCATGGTTTGATGCTACCAAG
TTGACAACAGATGTTCTTAATCTTTACAAGGTAAACACTTGCATTAGTTTACATTTACCTTTTAATCTACCATGAAAGTC
AAACCC------------------------------------------------------------------TTGTATAT
AGAAGAATTACAATTTCAAACACAAATG--------TTTTTTTAATTCTGCCCACATTTAACTATTAATGACTGGCCTAA
TGAGCTTCTGCATTCAGGCTCCACTATATGTCGAGGGCTGGGACGAAGCACTCCATGAAGTAGGCCGTCTTTCATTTTCC
ACCGTCCTATCATCAAAAAGAGCAACGGAACTACTAAGATCGGTGGAAGACCTCCCTGTTTTGGTGGTAGCAGGCTCTGA
GGATGCTCTTGTTTCTCTGAAGTCAGCACAAACTATGGCTTCAGAACTTGTAAATTCTGTAAGTTGTCTACC---ACTTG
TCCACTTCATCTTGTGCAGTCAGAGTGGCCTATATTTCTTCCACAATATATGACATAAATTCTGGCTTGATTTGCTGCAT
ATCTAAATAAATCTGTGTTTTGCTTCTTGTTGTTGTGCAGAGGCTAGTAACTATATCAGGATGTGGTCATCTGCCACACG
AAGAATGTGCCAATGCATTGCTCTCAGCTCTTTCTCCGTTCATCTCAAAATTGGTATCATCAGATGATTCATTGCAAAGA
TTGTAG--------------------------------------------------------------------------
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--------
>chr3A_1_TraesCS3A01G233700
ATAAGGGCGTACAATGGTGCTATCTTAGAAGTGGCACGTAGGATAACGTTGAGGTGAAGGAGAAAGAAATCATAAGAAAA
TGTTTGTCTTCTTTTATTTAAGAGATAATCTCTTAGCACGATACGTCTCACCATGTTTTTAAAAATAGTTAGTTATTGAA
GATAAGGCTAAAAGATAACTCATTGCACACATACTTTTATTATCACTTTTAAATACATGTAATGCTTAAGATAAGATTTA
TCTTATCAACCACTGGACATGTCCTAAGTGCAAAAAGTGTCTACCATTTTCGAGCTGTTAACTTTCGTACGGAACACTAT
TTTCACATGAAAAAACATGGCGGCTGTCATCGTAGACACTTTATACTAACATATAAACCGAGGAGCAAACAAGTCATGCT
TTACACATGAATGTTTACCTAGCGCGGACCGATTTATCTGTGTTCTCACAAGAGTCATGTCTTTTACCAAGAAAAGACAA
AGCATCTGAATTT-CTTTGCTGCAAAGCAACAGCCTAGAA-TGGGCAACCCATCTGTCCAACGCAGGACCGTGCTGCTGT
CAAGGACAGCACAACACAACACACGAAGGGAAAATGAAGCACGAAATCAGCGCAGGTAAAAAAAACCCAACTTATACCAC
TTGCTCGGCATAT-ATACTGACAAACAAAAGCAGTCTGCCGTTTGTTAGATCGCAG--------------GCACTAACAA
ATTGACAAACCCACCAGCGCACTGTGCCATAAATACCCCTCCGCTCCTCTCCCCCGTTTCTCCTCTCCT--TCTCTCT-C
TTCTTCCTCTTCCTCTCCCCTTCACCGGCCTCCTCCTTCCTCCGCTTCCTCCTCACGCCCCCACCCCACCCGCTACCT-C
GAAAGCCCGAACCCTAAACCCACGCAGA---AGCGGCGGCGGCGCGGCCTCCGCCTGTCGCATGCCCGCTGCCTCCTAGC
AGCCTGGGCCGCCGGCGATCGCCGGAGTCGGGGAGGGCGGCGAGCTCCCGTGCGTCGGAGAGAGATGGGGGCGGGCGGGA
AGGGCTGGCCGGAGACGGCGAGCCGCGGGGTGAGGACGGCCTGGTTCATGGTGGTCATGGTGGCGTCGCTGCTCGTCGCG
TCGGCGCCCGTCGTGGTGGCCGCCGGCGACGTGGCCGTCACGCTCTGGCTCGAGGCGCGCCTCGGCTGCCCGCGCTGCCG
CGGCCTCCGGGACCACCTCCGGGGGTACGCCTTCCGGAGCTCGCTCGTGGACATACCGCTCCTCTCCGTCCTTCGCTCCT
TCGCCATCACCTGTAAGCTGCTCGCATTGCCTCCTTAATGCTGTTTTACTGCGCGAAACGGCGCAGGCGCTAGCAATCCT
GGGGAATCTGTGTCTGTCTGGGTCGTGGTTGCTTGCTTCCCCATCCCCCGAGCGTTTTTTC------TTTCA-----TTT
TCTTTGGACAATGAATGGAGTTTCGTTTGTCCTTGGAGCCTATTTTTGGGACTTTGAGCGCTTCGCTTAGGATTCTCCAT
ATTTTTTGCATTTATGTATGAGGATTTGGTCACCCGAAAGCTACATCTGTGCTTGTCTTCTTTCGC-----TTGGGGGAG
ACGATCAAACTTTTAATACTAGTGGAC---TAGTGGAAGTATAAGTGTCGCCTGTTACTCTTCAATTCTGTACTAGTATA
CCTATTTATTTAGTAGTTATAAACCGCGTCATTTGCTTAAGTCCACAGCTTGAAACTTGAAAGGCATTTGAAAATTTTAA
-------TACAGTCTACACCAGCCATCATCAGATTCCACTAACCTGCTAGTGTACTTGTGCAGGCGTATACCTCGTGTGT
GATACTTCTGGTCTCTCTCACGGCCCGTACCTTGGAACCACAACCTTCTGTTCCTTGGCTTCGCTGCTCATCTTGCTCAT
GAAGGCCTGCGTTTACAGTCCAGCTCAGGACATTGGGCCTGAGCTCTCGCCGTCATTGGCGGACCACAGGCTAAATATGA
AGAAGCTATGGGGAATGCCTGCGCTTTTCCTGTCATCCTTGATCTTTGCTCTCGGCCATTTTGTTGTCGCTTACAGAACG
AGCTGCAGGGCTCGACGAAAGCTGCTCATCCATCGCATTGACCCTGAATCGGTATGGCCTGTTCGCTTGAATCTCACTGC
ACATGACGGATTGCTGTTTCTGTTTGGTAT-------TTATATGGCCTTTTCTGCTCCCTTTTCAGATTCTGGCTTACAA
GAATGCCTTTCCTGGATGCTACAAGGTTCCTCGGTCGCCCACTCCGCACAGTGCGAAACTTTATTCAAGGAGCGAGAGCG
AGACAAAGAGAAAAACTCTTGTGCACGATGACAGGGATATTCCAATCAGTTTTCTTGCTGATAGTGATAGCATGTTCACT
GCTTGCCAGGGGATCACTGTACACTACAAAATGTCTGATCCATCAAGTTGCATACCTCCAGCTCCTGAATTGTTTCCAGA
AACTAATCATGATGCTGTTTCGTCAAGCATTTCTCCTAGAAGACAGAGGCATGAGAGCCCACCAACAGCTTCCTCGAGTA
CCCGTCGTCTTTTGCATAGGAGCTTTAGTCATCAGTACCACCAAACATCGTTATATGCACCATTGTTGGTAGAACCGCTG
ACCTCTCCAACGGTGTCAGATGGCATCCCCTTTCTCAGTCTCGACGACGACAGCTTACAGGTGTGTTCGAGACCTATGGG
CTTTGATCTCGAGGCTGGAGAGCACGGGAAATTTGCTGTTGTTTTGGTCCATGGGTTTGGAGGGGGAGTATTTGCATGGA
GACATGTTAGTAATTTGCTTGCTCGACAAGTGGGTTGCACTGTGCTGGCCTTTGATCGCCCTGGATGGGGGTTAACATCT
CGACCTCGCAGAAAGGACTGGGAAGACAAGAATTTGCCAAACCCGTACGAGCTTGAGTCACAGGTGATCCATCTTACCAT
CTATTCATAGATTAGGTCATAATCTGTTCTTAGGGTTGCATTATGTCACCTAAACTCCTAATTAAAGTCTAGCAAGTACC
AACACCAACAGCATTTACCTCAAAGTTGCAGAGCAAATTTATTAATTTATTTTCACTCAAGTGAAATATTTTTTT-AAAT
ACCTCCCCCCACAAAAAATTATGGCTAACTAGGTGAAATGTTGTCTTTTCCAAAATATTCTTTGTGATAGTTAATTTTAT
AG-TAAGTGCTATTGCCTGAATGCTTTTAGTTTCCACCCTCAGAGAGACATTTTATCTTGAGAATATTCTGTGTCATTGA
GAGTTTGTCTTGTCACTGCAACTTTAAATAAATTCACTTTGAACTACATAACCTT-------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------------------------TTCCTCTGT
ATTTCAAACAGCGTGATCATGTTTTAAAAACACCATTTTGTATGCCCTTGTGCAGGTTGATCTTCTGATTTCATTTTGCT
TAGACATGGGCTTGGGCTCGGTCATTTTAGTTGGTCATGATGATGGCGGCTTGCTGGCACTGAGGACCGCAGAAAAGTTA
CGTGCTTCTGGAGATTCTAGGAAGGTACAGTATTGTGACTTTTCTTCGTCCATTGTAAATCAGCAACT-TATCATAATTT
TTGGATGGAAGTTTGTCGTCGTTGTAATGATCATATTAAATTAAATATTCCCCTGTGTGTTCCCAGGTTGAAGTGAAGGG
AGTTGTTCTTATAGGCGTAAGCTTATCAAGAGAAGTGATTCCTGCATTTGCTCGTATACTCCTGCATACTCCTCTGAGGA
AAAAGCACATGGTGCGCCCACTTCTACGTACTGAAATCACTCAGGTGATCAATCGACGAGCATGGTTTGATGCTACCAAG
TTGACAACAGATGTTCTTAATCTTTACAAGGTAAACACTTGCATTAGTTTACATTTACCTTTTAATCTACCATGAAAGTC
AAACCC------------------------------------------------------------------TTGTATAT
AGAAGAATTACAATTTCAAACACAAATG--------TTTTTTTAATTCTGCCCACATTTAACTATTAATGACTGGCCTAA
TGAGCTTCTGCATTCAGGCTCCACTATATGTCGAGGGCTGGGACGAAGCACTCCATGAAGTAGGCCGTCTTTCATTTTCC
ACCGTCCTATCATCAAAAAGAGCAACGGAACTACTAAGATCGGTGGAAGACCTCCCTGTTTTGGTGGTAGCAGGCTCTGA
GGATGCTCTTGTTTCTCTGAAGTCAGCACAAACTATGGCTTCAGAACTTGTAAATTCTGTAAGTTGTCTACC---ACTTG
TCCACTTCATCTTGTGCAGTCAGAGTGGCCTATATTTCTTCCACAATATATGACATAAATTCTGGCTTGATTTGCTGCAT
ATCTAAATAAATCTGTGTTTTGCTTCTTGTTGTTGTGCAGAGGCTAGTAACTATATCAGGATGTGGTCATCTGCCACACG
AAGAATGTGCCAATGCATTGCTCTCAGCTCTTTCTCCGTTCATCTCAAAATTGGTATCATCAGATGATTCATTGCAAAGA
TTGTAGCATACACCTGTCCATCTTCCCTTTTGAATTTTGCTCTCTTCTGTGCCCTCTACATTGAGTAGATGACCTCTAGC
TGTTGCGAGTTGGTGTGAGCCCATGTTAGTTGCAAAGTAGTGGAGCCTGACCCAAAATCTCAAGGGTCCTAGAGCTCCCC
TAATTTATTTTTT-GGTCATATGTATTTCTGTTCCTGATCTGTTCAATTGAGCAAGTTGAATCTGTACAGCCCATGCCTG
CAGTGTT-CCAGTTCACGTCTACCCCATCTCCAGCTGCTTCATTATCATTGACTAACTCCAGCGGAGCAAAATTTAATTA
ACAGATAGCTGAACAACAATGTGTTAGTTTTTGCTTCGCTCAAGTTCGAACTCAATTGTGTTTAGAAGCCTTCTCAATTG
TGTAACATTTTGAGAA-TTTTACGTAACTTACGCGCGTAGTTTCTGCCTAGTATTCACACAATGTAGGTTTCCATTGAAT
ATTTGTCCCAATGATGGTTGCAAAGGGGGTACACATGTCAGCGACATGCTGAGGAGATACTATGACCCTGCATTTGAACA
GATTCTGGATGGTTTTATTGGCTGTGTCACCTCCGTGGCTTCACATGCCAACATTACTTGACTGAGCTGTGAACTGGTGG
TTGGTGAGGCGTGTAAATAAAGATGTCCCAGGATCAGCCAGCCTCACGTGGCTTGTGTTGCA-------ACAGAAATTAC
TCTCTGAGGCTTTACACCATATATTTAGTG--------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------CAATTTAATTTGCACACC
GCTGCCTTAGAACAAAAATAAAATAAACATCAACAATTCTCATACAGCTCCTTCTGGCGTGCTATTTGCTGGCAGTCGTT
CCCTATCCCAGATACATGAAAGTTCAGAGGCTATCTATCCGAAATTATGAATATGTATATAGGAGTACAAGTTTCAGACT
TATCAGACGGCAGACACCAGAGAGTAATAAACCAGCAATACAGTCTCTGTTGTATAGGAAGCACTGAAACCTAGCAGGTT
GCTGGCAT
>chr3D_287
TTTTCAGCTGTTG-------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------ACTTATGTACGAAACACTAT
TTTCACATGGAAAAACATGACGGCTGTCATCGTAGACACTTTACACTAATATATAAACTGTTTGCTCCTCT--TCATGCT
TTACACATGAATGTTTACCCGGCACT-ACTGATTTATCTGTATTCTCACAAGAGTCATGCCTTTTACCAAGAAAAGACAA
GGCATCTGAATTT-CTTTGCTGCAAAGCAACAGCCTAGAA-TGGGCAACCCATCTGTCCAACGCAGGACCGTGCTGCTGT
CAAGGACAGCACAACACAATACACGAAGGGAAAATGAAACACGAAAACAGCGCCGGT---AAAAACCCAACTTATAC---
TTGCTCGGCATAG-----TGACAAACAAAAGCAGTCTGCCGTTTGTTAGATCGCAG--------------GCACTAACAA
ATTGACAAACCCACAAGCGCACTGTGCCATAAATACCCCTCCGCTCCTCTCCCCCGTCTCTCCTCTCCTTCTCTCTCT-C
TTCTTCCTCTTCCTCTCCCCTTCACCGGCCTCTTCC-TCCTCCGCTTCCTCCTCACGCCCCCTCCCCACCCACCACCCCC
GAGCGCCCGAACCCTAAACCCACGCAGCACCAGCGGCGGCGGCGCGGCCTCCGCCTGTCGCATGCCCGCTGCCTCCTAGC
AGCCTGGGCCGCCGGCGATCGCCGGAGTCGGGGAGGGCGGCGAGCTCCCGTGCGCCGGAGAGAGATGGGGGCGGGCGGGA
AGGGCTGGCCGGAGACGGCGAGCCGCGGGGTGAGGACGGCGTGGTTCATGGTGGTCATGGTCGCGTCGCTGCTCGTCGCG
TCGGCGCCCGTCGTGGTGGCCGCCGGCGACGTCGCCGTCACGCTCTGGCTCGAGGCGCGCCTCGGCTGCCCGCGCTGCCG
CGGCCTCCGGGACCACCTCCGGGGGTACGCCTTCCGGAGCTCGCTCGTGGACATACCGCTCCTCTCCGTCCTCCGCTGCA
TCGTCATCACCTGTAAGCTGCTCGCATTGCCTCCTTAATGCTGTTTTAGTGCGCGAAACGGCGCAGGCGCTAGCAATCCT
GGGGAATCTGCATCTGTCTGGGTCGTGTTTGCTTGCTTCCCCATCCCCCGAGCCTTTTTTTCTTTCTTTTTCTTTTCTTT
TCTTTGGAGAATGAATGAAGTTTCGTTTGTCCTTGGAGCCTATTTTTGGGACTT-GAGCGCTTTGCTTAGGATTCTTCAT
ATTTTTTGCATTTATGCATGAGGATTTGGTCACCCGAAAGCTACATCTGTGCTTGTCTTCTTTCGCTTGGGTTGGGGGAG
ACGATGAAACTTTTATT--------AC---TAGTGGAAGTACATGTGTCGCCTGTTACTCTTCAATT-----CTAGTATA
CCAATTTATTTAGT-----TAAACCGCGTCATTTGCTTAAGTCGACTGCTTGAAACTTGAAAGACATTGGAAAATTTCCG
GTACAGTTACAGTCTACACCAGCCATCGTCGGATTCCACTAACCTGCTAGTGTACTTGTGCAGGTGTATACCTCGTGTGT
GATACTTCTGGTCTCTCTCATGGCCCGTACCTTGGAACCACAACCTTCTGTTCCTTGGCTTCGCTGCTCATCTTGCTCAT
GAAGGCCTGCGTTTACACTCCAGCTCAGGACATTGGGCCTGAGCTCTCGCCGTCATTGGCGGACCACAAGCTAAATATGA
AGATGCTATGGGGAATGCCTGCGCTTTTCCTGTCTTCCTTGATCTTTGCTCTCGGCCATTTTGTTGTCGCTTACAGAACG
AGCTGCAGGGCTCGACGAAAGCTGCTTATCCATCGCATTGACCCTGAATCGGTATGGCCGGTTCGTTTGAATCTCACTGC
ACATGACGGATTACTGTTTCTATTTGGTAT-------TTATGGCCCCTTCTGCT---CCTTTTCAGATTCTGGCTTACAA
GAATGCCTTTCCTGGATGCTACAAGGTTCCTCGGTCGCCCACCCCGCACAGTGCGAAACTTTATTCAAGGAGCGAGAGCG
AGACAAAGAGAAAAACTCTTGTGCACGATGACAGGGATATTCCAATCAGTTTTCTTGCTGATAGTGATAGCATGTTCATT
GCTTGCCAGGGGGTCACTGTGCACTACAAAATGTCTGATCCATCAAGCTGCATATCGCCAGCTCCTGAATTGTCTCCAGA
AACTAATCATGATGCTGTTTCGTCAAGCATTTCTCCTAGAAGACAGAGGCATGAGAGCCCACCAACAGCTTCCTCGAGTA
CCCGTCGTCTTTTGCATAGGAGCTTTAGCCATCAGTATCACCAAACATCGTTATATGCACCATTGTTGGTAGAACCACTG
ACCTCTCCAACGGTGTCAGATGGCATCCCCTTTCTCAGTCTTGACGACGGCAGCTTACAGGTGTGTTCGAAACCTATGGG
CTTTGATCTTGAGACTGGAGAGCACGGGAAATTTGCTGTTGTTTTGGTCCATGGGTTTGGAGGGGGAGTATTTGCATGGA
GACATGTTAGAAATTTGCTTGCTCGACAAGTGGGTTGCACTGTGCTGGCCTTTGATCGCCCTGGATGGGGATTAACATCT
CGACCTCGCAGAAAGGACTGGGAAGACAAGAGTATGCCAAACCCATACGAGCTTGAGTCACAGGTGATCCTTCTTACTG-
---------GATTAGGTCGTAATCTATTCGTAGGGTTGAATTATGTCACAAGAATTCTTAATTAAAGTCTAGCAAGTACC
AACAACG------TTTACCCAAAAGTTGCAGAGT-AATTTATTTATTTATTTTCACTCAAGTGAAAGATTTTTTAAATAC
CTCAAGTAT---AAAAAATTATGGCTAACTAGGTGAAATGTTGTCTTTTCCAATATATTCTCTGTGATAATTAATTTTTA
TATTAAGTGCTATTGCCTGAATGCTTTTAGTTTCCACGCTCAGAGAGATATTTTATCTTCAGAATATTCTTTGTCATTGA
GAGTTTTTATTGTCACTGCAACTTTGAATAAATTCAGTTTGAACTATGAGCCTAATTGGTTTGGTGCCAATAATTGGCAT
GCCAATTGTTGGCAATTCCAAAAAAATGGTTGGTTCCCATCTCTCAAAAATTGCCAATTTTTGGCAATTTTCTGTTTTGC
CAAATGTTGGCTTGCCAAATATTGGCAATGCCAAATTTTGGCAGCAAACCAATTAGCCTCTACGAAACTTCTTCCACTGT
ATTTCAAACAGCGTGATCATGTTTTAAAAACACCATTTTGTATGTCCTTGTGCAGGTTGATCTTCTGATTTCATTTTGCT
CAAACATGTTCTTGGGCTCGGTCATTTTAGTTGGTCATGATGATGGCGGCTTGCTGGCCCTGAGGACCGCAGAAAAGTTA
CGTGCTTCTGGAGATTCTAGGAAGGTACAGTATTGTAACCTTTCTTCTTCTATTGTAAAATCCGTGATCTATCATAGTTT
TTGGA---AAGTTTGTCATCGTTGTATTGATCATATTAAATTAAATGTTCCCCTGTGTGTTCCCAGGTCGAAGTCAAGGG
AGTTGTTCTTATAGGTGTAAGCTTATCAAGAGAAGTGATTCCTGCATTTGCTCGTATACTCCTGCATACTCCTCTGAGGA
AAAAGCACATGGTGCGCCCACTTCTACGTACTGAAATCACTCAGGTGATCAATCGACGAGCATGGTTTGACGCTACCAAG
TTGACAACAGATGTTCTTAATCTTTACAAGGTGAACACTTGCATTAGTTTACATTTGCCTTTTAATCTGTCATGAAAGTC
AAACCCCCTTTTTC------------------------------------------------------------------
------------------------------------------CCATTCTGCGCAGATCTAACTATTAACT---GACCTAA
TGAGCTTTTGCATTCAGGCTCCATTATATGTCGAGGGCTGGGATGAAGCACTCCATGAAGTAGGCCGTCTTTCATTTTCC
ACTGTCCTATCATCAAAAAGAGCAACGGAACTATTAAGATCGGTGGAAGACCTCCCTGTTTTGGTGGTAGCAGGCTCTGA
GGATGCTCTTGTTTCTCTGAAGTCAGCACAAACTATGGCTTCAAAACTTGTAAATTCTGTAAGTTGTTTACCCCCACTTG
TCCACTTCATCTTGTGCTGTCAGAGTGGTCTATATTTCTTCCAGAATACAGTATATAAATTCTGCCATGATT---TGCAT
ATCTAAATAAATCTGTGTTTTGCTTCTTGTTGTTGTGCAGAGGCTAGTAACTATATCAGGATGTGGTCATCTGCCACACG
AAGAATGTGCCAATGCATTGCTCTCAGCTCTTTTTCCATTCATCTCAAAATTGGTATCATCAGATGATTCATTGCAAAGA
TTGTAGCATACACATGTCCACCTTTCCTTTTGAATTTTGCTCTCTTCCGTGCCCTCTACATTGAGTAGATGACCTCTAGC
TGTTGCGAGTTGCTGTGATTCCATGTTAGTTGCAAAGTAGTGGAGCCTGACCCAAAATCTCAAGGGTCCTAGAGCTCCCC
TAATTTATTTTTTTGGTCGTATGTATTTCTGTTCCCGATCTGTTCAATTAAGCAAGTTGAATCTGTACAGCCCATGCTTG
CAGTGTT-CCAGTTCACGTCTACCCCAGCTCCAGCTGCTTCATTATCATTGACTAACTCCAGCGGAGCAACATTTAAGTA
ACAGATACCTGAACAACAATGTGCTAGTTTTTGCTTCGCTCAAGTTCGAAGTCAATTGCGTTTAGAAGCCTTCTCAGTTG
TGTGACATTTTGAGAA-TTTTGCGGAACTTACACACGTAGTTTCTGCCTAGTATTCACACAATGTAGGTTTCCATTGAAT
ATTTGTCCCAATGATGGTTGCAAAGGGGGTGCACATGTCAGCGACATGCTGAGGAGATACTATGACCCTGCATTTGAACA
GATTCTGGATGGTTTTATTGGCTCTGTCACCTCCGTGGCTTCACATGCCAACATTACTTGCCTGAGCTGTGAACTGGTGG
TTGGTGAGGCGTGTAAATAAAGATGTCCCAGGATCAGCCAGCCTCACGTGGCTTGTGTTGCAAGTTGCAACAGAAATTAC
TCTCTGATGAGGCTGTGAACACGTGTGACCTTTACACCAGTACTCCCTCCACAAACTACTACTCGCTCCGTCCCAAAGTG
TCTCAACTTTGTATTAGCTCTAGTACAAATTTATACTAAGCTCCAGACACTTATTTTGGGACGGAGGGGGTACTAGTATA
AACTTTGAGATCATTACTTTATAGTGATCTAAAAGATGTTATATTAGTTTACAGAGGGAGTACAATTTAATTTGCACACC
ACTGCCTTTGAACAAAAATAAAACGAACATCAACAATTCTCGTACAGCTCCTTGTC----------TGCTGGCAGTCCTC
TTCTG---------------------------------------------------------------------------
----AGACGGCAGACACCAGGGAGTAATAAACCAGCAATACAGTCTCTGTTTTATAGGAAGCACTGAAACTTAGCAGGTT
ACTGGCAT
>chr3B_394
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------------------TCATGCT
TTACACATGAATGTTTACCCAGCACC-ACCGATTTATCTATGTTCTCACAAGGGTCATGTCTTTTACCAAGAAAAGACAA
GGCATCTGAATTTTCTTTGCTGCAAAGCAACAGCCTAGAAATGGGCAACCCATCTGTTCAACGCAGGACCGTGCTGCTGT
CAAGGACAGCACAACACAA-ACACGAAGGGAAAATGAAACACGAAAACAGCGCAGGT--AAAAAACCCAACTTATAC---
TTGCTCGGCATGGCATCCTGACAAACAAGAGCAGTTTGCCGTTTGTTACTCTAGATCGCAGGCAGCAGTAGCACTAACAA
ATTGACAAACCCACAAGCGCACTGTGCCATAAATACCCCTCCGCTCCTCTCCCCCGTTTCTCCTCTCTCTCTCTCTCTCC
TTCTTCCTCTTCCTCTCCCCTTCACCGGCATCTTCC-TCCTCCGCTTCCTCCTCACGCCCCCACCCCACCCACCACGCCC
GAACGCCCGAACCCTAAACCCACGCAGCA---GCGGCGGCGGCGCGGCCTCCGCCTGTCGCATGCCCGCTGCCTCCTAGC
AGCCTGGGCCGCCGGCGATCGCCGGAGTTGGGG----------------------------GAGATGGGGGCGGGCGGGA
AGGGCTGGCCGGAGACGGCGAGCCGCGGGGTGAGGACGGCGTGGTTCATGGTGGTCATGGTCGCGTCGCTGCTCGTCGCG
TCGGCGCCCGTCGTGGTGGCCGCCGGCGACGTCGCCGTTACGCTCTGGCTCGAGGCGCGCCTCGGCTGCCCGCGCTGCCG
CGGCCTTCGGGACCACCTCCGGGGGTACGCCTTCCGGAGCTCGCTCGTGGACATACCGCTCCTCTCCGTCCTTCGCTCCC
TCGTCATCACCTGTAAGCTGCCCGCATTGCCTCCCTAATGCTGTTTCACTGCGCCAAACGGCCCAGTTGCTAACAATCCT
GGGGAATCTGTATCTGTCTGGGTCGGGTTTGCTTGCTTCCCCATCCCCCGAGCCCTTTTTC------TTTTCTTTTCTTT
TCTTTGGACAAAGAATGAAGTTTCGTTTGTCCTTGGAGCCTATTTTTGGGACTT-GAGCGCTTCGCTTAGGATTCTCCAT
ATTTTTTGCATTTATGCATGAGGATTTGGTCACCCGAAAGCTACATCTGTGCTTGTCTTCTTTCGC-----TTGGGGGAG
ACGATGAAACTTTTATT--------AGTAGTAGTGGAAGTATAAGTGTCGCCTGCTACTCTTCAATT--GTACTAGTATA
CCAATTTATTTAGT-----TAAACCGCGTCATTTCCTTCAGTCGACAGCTTGAAACTTGAAAGACATTTGAAAATTTTCG
GTACAGTTACAGTCTGCACCAGCCATCATCAGATTCCACTAACCTGCTAATGTACTTGTGCAGGCGTATACCTCGTGTGT
GATACTTCTGGTCTCTCTCACGGCCCGTACCTTGGGACGACAACCTTCTGTTCCTTGGCTTCACTGCTCATCTTGCTCAT
GAAGGCCTGCGTTTACAGTCCAGCTCAGGACATTGGGCCTGAGCTCTCGCCGTCATTGGCGGATCACAGGCTAAATATGA
AGAAGTTATGGGGAATGCCTGCGCTTTTCCTGTCTTCCTTGATCTTTGCTCTCGGCCACTTTGTTGTTGCTTACAGAACG
AGCTGCAGGGCTCGACGAAAGCTGCTTATCCATCGCATTGACCCTGAATCGGTATGGCCTGTTCGCTTGAATCTCACTGC
ACATGATGGATTGCTGTTTCTGTTTGGTATTTATGGGTTATGGCCCCTTCTGCT---CCTTTTCAGATTCTGGCTTACAA
GAATGCCTTTCCTGGATGCTACAAGGTTCCTCGGTCGCCCACTCCGCACAGTGGGAAACTTTATTCAAGGAGCGAGAGCG
AGACAAAGAGAAAAACTCTTGTGCACGATGACAGGGATATTCCAATCAGTTCTCTTGCTGATAGTGATAGCATGTTCATT
GCTTGCCAGGGGATCACTGTACACTACAAAATGTCTGATCCATCAAGTTGCATATCTCCAGCTCCTGAATTGTTTCCAGA
AACTAATCATGATGCTGTTTCGTCAAGCATTTCTCCTAGAAGACAGAGGCATGAGAGCCCACCAACAGCTTCCTCGAGTA
CCCGTCGTCTTTTGCATAGGAGCTTTAGTCATCAGTATCACCAAACATCGTTATATGCACCATTGTTGGTAGAACCACTG
ATCTCTCCAACGGTGTCAGATGGCATCCCCTTTCTCAGTCTTGACGACGGCAGCTTACAGGTGTGTTCAAAACCTATGGG
CTTTGATCTTGAGGCTGGAGAGCACCGGAAATTTGCTGTTGTTTTGGTCCATGGGTTTGGAGGGGGAGTATTTGCATGGA
GACATGTTAGTAATTTGCTTGCTCGACAAGTGGGTTGCACTGTGCTGGCCTTTGATCGCCCTGGATGGGGATTAACATCC
CGACCTCGCAGAAAGGACTGGGAAGACAAGAATTTGCCAAACCCATACGAGCTTGAGTCACAGGTGATCCATCTTACCAT
CTATTCATTGATTAGGTCATAATCTATTTGTAGGGTTGAATTATGTCACAAGAACTCCTAATTAAAGTCTAGCAAGTACC
AACACCAACAGTATTTACCCCAAAGTTGCAGTGAAATTTTATTTATTTATTTTCACTCAAGTGAAATATTTTTTTTAAAT
ACCTCTCCCCACAAAAAATTATGGCTAACTAGGTGAAATGTTGTCTTTTCCAAAATATTCTTTGTGATAATTAATTTTAT
AG-TAAGTGCTATTGCCTGAATGCTTTTAGTTTCCACCCTCAGAGAGACATTTTATCTTGAGAATATTCTGTGTCATTGA
GAGTTTGTATTGTCACTGCAACTTTAAATAAATTCACTTTGAACTACATAACCTT-------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------------------------TTCCTCTGT
ATTTCAAACAGCGTGATCATGTTTTAAAAACACCATTTTGTATGCCCTTGTGCAGGTTGATCTTCTGATTTCATTTTGCT
CAGACATGGGCTTGGGCTCGGTCATTTTAGTTGGTCATGATGATGGCGGCTTGCTGGCACTGAGGACCGCAGAAAAGTTA
CGCGCTTCTGGAGATTCTAGGAAGGTACAGTATTGTGACCTTTCTTCGTCCATTGTAAATCAGCAACT-TCTCATAATTT
T-GGATGGAAGTTTGTCGGCGTTGTAATGAGCATATTAAATTAAAT--TCCCCTGCGTGTTCCCAGGTCGAAGTGAAGGG
AGTTGTTCTTATAGGCGTAAGCTTGTCGAGAGAAGTGATTCCTGCATTTGCTCGTATACTCCTGCATACTCCTCTGAGGA
AAAAGCACATGGTGCGCCCACTTCTACGTACTGAAATCACTCAGGTGATCAATCGGCGAGCATGGTTTGATGCCACCAAG
CTGACAACAGACGTTCTTAATCTTTACAAGGTATACACTTGCATTAGTTTACATTTACCTTTTAATCTATTGTGAAAGTC
AAACCCTCTTAACAATTATTTGAATACACCAAAAGGGTAACTCTTGTTGCATGTTGCATTGTATGATACTACTTATATAT
AGAAGAATTACAACTGCATTCAAACATGCATGTTTTTTTTTTCCATTGTGCGCACATTTAACTATTAACC---GGCCTAA
TGAACTTTTGCATTCAGGCTCCACTATATGTCGAGGGCTGGGACGAAGCACTCCATGAAGTAGGCCGTCTTTCATTTTCC
ACCGTTCTATCATCAAAAAGAGCAACAGAACTACTAAGATCGGTGGAAGACCTCCCTGTTTTGGTGGTAGCAGGCTCTGA
GGATGCTCTTGTTTCTCTGAAGTCGGCACAAACTATGGTTTCAAAACTTGTAAATTCTGTAAGTTGTCTACC---ACTTA
TCCACTTCATCTTGTGCAGTCAGAGTGGTATATATTTCTTCCATAATATATGACATAAATTCTGGCTTGATT---TGCAT
ATCTAAATAAATCTGGGTTTTGCTTCTTGTTGTTGTGCAGAGGCTAGTAACTATGTCAGGATGTGGTCATCTGCCACACG
AAGAATGTGCCAATGCATTGCTCTCAGCTCTTTCTCCGTTCATCTCAAAATTGGTATCGTCAGATGATTCATTGCAAAGA
TTGTAGCATACACCTGTCCATCTCCCCTTTTGAATTTTGCTCTCTTCTGTGCCCTCTACATTGAGTAGATGACCTCTAGC
TGTTGCGAGTTGGTGTGATCCCATGTTAGTTGCAAAGTAGTGGAGCCTGACCCAAAATCTCAAGGGTCCTAGAGCTCCCC
TAATTTATTTTTT-GGTCATATGTATTTCTGTTCCCGATCTGTTCAATTAAGCAAGTTGAATCTGTACAGCCCATGCTTG
CAGTGTTTCCAGTTCACGTCTACCCCAGCTCCAGCTGCTTCATTATCATTGACTAACTCCAGCGGAGCAACATTTAAGTA
ACAGATACCTG-ACAACAATGTGTTAGTTTTTGCTTCGCTCAAGTTCAAACTCAATTGCGTTTAGAAGCCTTTTCAATTG
TGCGACATTTTGAGAATTTTTACGTAACTTACACACGTAGTTTCTGCCTAGTATTCACACAATGTAGGTTTCCAT----T
ATTTGTCCCAATGATGATTGCAAAGGGGGCGCACATGTCAGCCACATGCTGAGGAGATACTATGACCCTGCATTTGAACA
GATTCTGGATGGTTTTATTGGCTCTGTCACCTCCGTGGCTTCACATGCCAACATTACTTGCCTGAGCTGTGAACTGGTGG
TTGGTGAGGCGTGTAAATAAAGATGTCCCAGGATCAGCCAGCCTCACGTGGCTTGTGTTGCA-------GCAGAAATTAC
TCTCTGA-------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------
>SNPs
S-SSSS--SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS----SS-----S--------
---------S---------S-----------------------S-----S--------S-SSSSSSSSS-SSS-------
-------------------S---S-SS-----------------------------------------------------
S-------------------------------------------------------------------------------
-------------------S------------------S-------S----------SS------------------SSS
------------S---S---------------------------------------------------------------
--------------S-----------------------------------------------------------------
--------------------------------S---S----------------------------------S-S---S--
---S-----------------------S----------------------------------------------------
------------------------------------------------------S-------------------------
----------------------------------------S--------------------S------------------
--------------------------------S-----------------------------------------------
-------------------------------------------------------------------------------S
---S----------------------------------------------------------------------------
-----------S---------------S-------------------------S----------------SS--------
-----------------S------------------------------------S-------------------------
----------------S---------------------------------------------------------------
-----S---------S-SSSSSSSS------------------------------------------SS-----------
--S-----------SSSSS------------------------S-------------------S--------------SS
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------S---------------------------------------------
--------------------------S-----------------------------------------------------
-----------------------------------------SSSS----S-SSSSSS-----------------------
--------------------------------------------------------------------------------
------------------------------------------------------------------------------S-
------------------------------------------------------S-------------------------
--------------------------------------------------------------------------------
-------------------------------------S--------------------------------------S---
-----------------------------------------S-------S--------------------S---------
---------S----------------------------------------------------------------------
----------------------------------------------------------------------S---------
--------------------------------------------S-----------------------------------
--------S----------------S---S--------S----------SSS----------------------------
-----------S-------S-------------S---------S------------------------------------
-----S---------------------------------------------------------------S----------
--------------------------------------------------------------------------------
--------S-----------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
S-------------------------------------------------------------------------------
---------------------------------------S----------------------------------------
----------------------------------------------S---------------------S-----------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------------------------S----------
--------------------------------------------------------------------------S-----
-------------S-S--SS--S-S-----------------SS-------S----------------SSSSS-------
-------S------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------S------------------------------------
----------------------------S--------------S----------------------------SSS-----
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------S-------------------------------------------------------------
-----------------------------------S-------------S---------------------------S--
---------------------------S------------------------------------------S------S--
-------S--------------------------------------------------S---------------------
---S----------------------------S-S---------------------------------------------
------------------------------S-------------------------------------------------
-----------------------S------------------------------------S-------------------
--------------------------------------------------------------------------------
-------S-SSSSSSSSS-S-SS-S-SSSS--------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
S-------S--------------SS----------------S-----------S-SSSSSSSSSSS-----------S-S
SS--SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSS----------------S------------------------------S------------------S---------
S-------
>forward_908
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--------GAACCCTAAACCCACGCAGA----------------------------------------------------
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>reverse_2203
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------------------------------------------TGGCCTTTTCTGCTCCCTTT------------------
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>forward_1388
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---------GTGTCTGTCTGGGTCGTGG----------------------------------------------------
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>reverse_2682
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-----------------------------------------CGACGACGACAGCTTACAGG-------------------
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>forward_1724
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-----------------------CCGCGTCATTTGCTTAAGTCC------------------------------------
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>reverse_3807
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----------------------------------------------ATTCCCCTGTGTGTTCCCAG--------------
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>forward_2682
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---------------------GGCATCCCCTTTCTCAGTCTC--------------------------------------
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>reverse_4233
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------------------------------------------------------------------------TGGCCTAA
TGAGCTTCTGCA--------------------------------------------------------------------
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>forward_3052
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-----------------------------------------------------------------------GCAAGTACC
AACACCAACAGC--------------------------------------------------------------------
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>reverse_5153
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--------------------------------GCGCGTAGTTTCTGCCTAGT----------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------
