>input_sequence_62896
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-------------ATGGCCGCCTCTATCGCCGCCGCCGC---------GTCCGTCTCCCACCTCCTCCTCGGGCCGAAAC
CCAAGCCCACAACCCCGCCCCGCCTCTCCCTCCTCCCCCGCAGGCGCTCCGGAGCCGCCGGGGCCATCTCCGCCTCCGCG
TCCGCGGCCTCCGACTTCCTCGCCCCGGTCCCGTCCCTCAAGTCCCGCCTCGCCGCCGGCGACACCCTCTACGGCCTCTT
CCTCCTCTCCTTCTCCCCCACGCTCGCCGAGATCGCCGCGCTCGCCGGCTACGACTACGTGGTCGTCGACATGGAGCACG
GGCCGGGCGGCATCACGGAGGCCCTCGCCTGCCTCCGCGCCCTCGACGCCGCCCGCACCCCCGCCGTCCTCCGCCTCCCG
GAGGCCTGCCCCGTCTGGGCGAAGAAGGCGCTCGACCTCGGCCCCGCGGGCCTCATGCTTCCCGCCGTCGAGTCTCCGGC
CGCTGCCGCGGAGGCTGTATCCCACTGCCGCTACCCGCCCCGCGGCGTCCGTGGCGCTGCCTACCCAATCGTCCGCGCAT
CCGCCTACGGCCTCGACGACTCCTACCTCTCCCGCTGCGAGGACGACACCCTCATCATCTGCCAGGTCGAGACTGCCGCC
GGCGTTGCGGAGATCGACGCCATCGCCGCCGTCGAAGGGGTCGACGTCGTCCAGATGGGCCCGCTCGACCTGTCGGCGAG
CATGGGGTACCTGTGGGATCCCGGGAACAGGAAGGTGCGAGCGGCGCTGAGGGAGGCTGAGAGGAAGGTGCTGGAGGCCA
GGAAGAAGAAGGACGCTGCTCCGGAAACCAATGCGGCTTACTTGGGTGGGTTTGCGATGCCCAATGACCCAGCTGAGCAG
CTCAAGCACAGGGGATACCATATGGTTGCAGGTGCAGTGGACATTGGGTTGTTCCGGAAGGCGGCATTGGAGAATGTCAA
GCGGTTCAAGGAGGCGTCAATGGAGATTGGTGAAGCAGAGGGCGAGGAGGAGGATGAGAAGGAAGATGGATACTGGAGTG
AATGA---------------------------------------------------------------------------
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>chr5A_1_TraesCS5A01G315900
GATCCTTTGAAACCTTCTAGAAGCTTCACGGTACGTCCATTTCTGTTTTCTCGTTCATTGGTCTGGCGTTGGTGCCTGTT
TGCCGCGCCAACATGCACATTTGCGCTATCCCGCCTTTATGGCGGGCCAAAATGCCATGGCCAACACATTTCAGCCACTT
TACTCTCTTGTTTAAAACTTTGGGTGCTACTTTACCATGCAGACGTCTGAATCACAAAGTCATATTCCAGGGAGACAAAC
GTCCTCCCCAAAGTCTGATGGCTTCACGTCACATTACGTTGTACGTGGCATCCACCTCGTCCGGAAAAGGCCAAGTGCAG
GGCCTGTCAGCCAGTCAAATGCAACAGATGATCAGTTTCACCGACAATACAGCAGAGAAATCATGTGCGCTGCCATCCAT
CGTAAATAAGAGTATTGCATGCAGAAAACAAAGATCAACCTGGCGTAGTATCCACATTAGCCACCGAAGAGGAGGCGGAC
TTGCGACGGCGCCGACGGGAGGCCAAAACCCTAGCTTTTTTGTGGAGGAGGAGGAGGCGGCAACGGCTAGAGATGAGCCC
GAGTAGCAGCGCAGGACCCATTTGCAGGTCAAATACCGCTTTGACTATGTCCATGTGAGCGAATGGCTCGAACAAACTCA
TCAAAGAATTACATTATATGA---CTACTACTCTAGTAGTGTCAAAATAC------------GTCTTATATTATGGAGCG
AAGGGAGTATT------------------------------GAATAGATCAAGGAGAAACAAGCATCAAT--------TT
ACCAACCATTTTCTTCAGGGGAGTTGTTGGACATTTGCTGTCCGTAGATCGCACCAAGGACCGCCAAAATCCGACGGCTA
GCGCCCACCGGCGCGTGCTCCGCGGATCCAGCCGAGCCAGATCCACGCGGCACGTGACAAGTGACACGACGCTCGCTCAC
TCCCCCCACACTCCCCGGCCGCCGCCGCCGGCCTCGTCAGTCGCAGATCCCCCAACCACCAGCGAAGCCGCCGCTCACCG
CCGACTGGCCCACATGGCCGCCTCTATCGCCGCCGCCGC---------GTCCGTCTCCCACCTCCTCCTCGGGCCGAAAC
CCAAGCCCACAACCCCGCCCCGCCTCTCCCTCCTCCCCCGCAGGCGCTCCGGAGCCGCCGGGGCCATCTCCGCCTCCGCG
TCCGCGGCCTCCGACTTCCTCGCCCCGGTCCCGTCCCTCAAGTCCCGCCTCGCCGCCGGCGACACCCTCTACGGCCTCTT
CCTCCTCTCCTTCTCCCCCACGCTCGCCGAGATCGCCGCGCTCGCCGGCTACGACTACGTGGTCGTCGACATGGAGCACG
GGCCGGGCGGCATCACGGAGGCCCTCGCCTGCCTCCGCGCCCTCGACGCCGCCCGCACCCCCGCCGTCCTCCGCCTCCCG
GAGGCCTGCCCCGTCTGGGCGAAGAAGGCGCTCGACCTCGGCCCCGCGGGCCTCATGCTTCCCGCCGTCGAGTCTCCGGC
CGCTGCCGCGGAGGCTGTATCCCACTGCCGCTACCCGCCCCGCGGCGTCCGTGGCGCTGCCTACCCAATCGTCCGCGCAT
CCGCCTACGGCCTCGACGACTCCTACCTCTCCCGCTGCGAGGACGACACCCTCATCATCTGCCAGGTCGAGACTGCCGCC
GGCGTTGCGGAGATCGACGCCATCGCCGCCGTCGAAGGGGTCGACGTCGTCCAGATGGGCCCGCTCGACCTGTCGGCGAG
CATGGGGTACCTGTGGGATCCCGGGAACAGGAAGGTGCGAGCGGCGCTGAGGGAGGCTGAGAGGAAGGTGCTGGAGGCCA
GGAAGAAGAAGGACGCTGCTCCGGAAACCAATGCGGCTTACTTGGGTGGGTTTGCGATGCCCAATGACCCAGCTGAGCAG
CTCAAGCACAGGGGATACCATATGGTTGCAGGTGCAGTGGACATTGGGTTGTTCCGGAAGGCGGCATTGGAGAATGTCAA
GCGGTTCAAGGAGGCGTCAATGGAGATTGGTGAAGCAGAGGGCGAGGAGGAGGATGAGAAGGAAGATGGATACTGGAGTG
AATGAGCAC--------------TGGGGAACTGGTGATGGCTTCATTTGTTTGTGTTCTGAATTGAAACTTTTAGGGTCT
CCATTTTCTGGACTTTGGTGTACTCTTGTTTAGTCGATGATTCGGGTTTTAGGGAGCAAATCTGTTTGGGCACCTTACTG
TTCCCATTTGTAGGTGGTAATTGGCGAGTACCTAATAAAGAGTTGGATTTTAGTGAAATGCTGCTGTGTCCGTCTGTTCC
ATTTTATTTGTGGAAAGCTA------GAAATTTGTATGAGCCAAACACCAGAAATTACTTCATGGCAAGTGAAAAGCAGT
GGTAAGTTTTTCCAATAAAAGATTGATGGTGAATTTGTTTTGTGGGGCCAGGGCAAGCCCATAGCCAGACTCCAGATTGT
CCATCTCAACACTTGCTCAACCTCAACCACTAGTTCAGATATGCTGGGACATCCCATCCAGAACCATTTAGGTCCTTTGG
ACACTTGCACATCCAAAAAATATCTCCTTCCAGCAACAGGATGCAGCCTTAGGATTAGCTAGGCTCTCTTCTGATTCTCC
CCCAAG-TTTTGCTGTTCTTTATCTCATGACCACGATGATCGCAGCTAGCTCCATAGTGAAAGCCAACCTTCCTTGCTCG
TCAAGGATATCCTCCAGCTCAGACTTCTCATCTGGTCATTCTTGGCGCCCATTAGAGGCGGCAAAACATTACCGGGCGCA
TGGTGTGCGCTCGCTGCGGATAACATGTGCTGCCACTAAGACTGCGAAATCTCCAGGTACTGTGAATACGCTTGGCTCCT
TTTACTTGATATGGAACTGTTCGTTACTCTGTTTATGCATGATGCTATCTTGGCATGTTAACCCCCTTTTTTTTGCAGCT
GAAGAAGAATGGAAGATCAAACGGCAACTCCTAGTAGAGAAGCGGGTAATAACCTCCATTCTGACTGTTAACTATTTTTG
CATTAAACATATATGAAAGGTTGCTGCAAACTTCTTAACCTTAAGTCTTATGAAGAGGGTTAGAGT
>chr5D_574
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-------------GGACTCATTCGCAGGTCAAAAACCGCTTTGACTATGTCCATTTCAGCAAACCTCTTGAGCAAACCCA
TTAAGGGATTACGTTATGTGA---TTATTAGTA---TAGTGTTAAAAAAC------------GTCTTATATTATGGCACT
AAGGG-GTATT------------------------------GAATAGATGAAGCAGCAACAACGATCAGGTCAGTAGGTT
ACCAACCATTTTGCTCAGGGGAGCTGTTGGACATTTGCTCTACCTAGATCGCACCAAGTACCGCCAAAATCCGACGGC--
---------GGCGCTTGCGCCGCGGATCCAGCCGAGCCAGATCCACGCGGCACGTGACAAGTGACACGACGCTCGCTCAC
TCCACCCACGCTCCCCGGCCGCCGCTGCCGGCCTCGTCAGTCGCAGATCCCCCAACCACCAGCGAAGCCGCCGCTCACCG
CCGATCGGCCCACATGGCCGCCTCTATCGCCGCCGCCGCCGCCGCCGCGTCCATCTCCCACCTCCTCCCCGCGCCGAAAC
CCAAGCCCAGAACCCCACCCCGCCTCTCCCTCCTCCCCCGCAGGCGCTCCCGCGCCGCCGGTGCCATCTCCGCGTCGGCG
TCCGCGGCCTCCGACTTCCTCGCCCCCGTCCCGTCCCTCAAGTCCCGCCTCGCCGCGGGCGACACCCTCTATGGCCTCTT
CCTCCTCTCCTTCTCCCCCACGCTCGCCGAGATCGCCGCGCTCGCCGGCTACGACTACGTGGTCGTCGACATGGAGCACG
GGCCGGGCGGCATCACGGAGGCCCTCGCCTGCCTCCGCGCCCTCGACGCCGCCCGCACCCCCGCCGTCCTCCGCCTCCCG
GAGGCCTGCCCCGTCTGGGCGAAGAAGGCGCTCGACCTCGGCCCCGCGGGCCTCATGCTTCCCGCCGTCGAGTCCCCGGC
CGCTGCCGCGGAGGCTGTATCCCACTGCCGCTACCCGCCCCGCGGCGTCCGTGGCGCTGCCTACCCAATCGTCCGCGCAT
CCGCCTACGGCCTCGACGACTCCTACCTCTCCCGCTGCGAGGACGACACCCTCATCATCTGCCAGGTCGAGACCGCCGCC
GGCGTTGCGGAGATCGACGCCATCGCCGCCGTCGAAGGGGTCGACGTCGTCCAGATGGGCCCGCTCGACCTGTCGGCGAG
CATGGGGTACCTGTGGGATCCAGGGAACAGGAAGGTGCGAGCGGCGCTGAGGGAGGCTGAGAGGAAGGTGTTGGAGGCCA
GGAAGAAGAAGGACGCTGCTCCGAAAACCAATGCGGCTTACTTGGGTGGGTTTGCGATGCCCAATGACCCAGCTGAGCAG
CTCAAGCATAGGGGATACCATATGGTTGCAGGTGCAGTGGACATTGGGTTGTTCCGGAAGGCGGCATTGGAGGATGTCAA
GCGGTTCAAGGATGCGTCAATGGAGATTGGTGAAGCAGAGGGCGAGGAGGAGGATGAGAAGGAAGATGGATACTGGAGTG
AATGAGCAC--------------TGGGGAACTGGTGATGGCTTCGTTTGTTTGTGTTCTGAATTGAAACTTTTAGGGTCT
CCATTTTCTGGACTTTGGTGTACTCTTGTTTAGTCGATGATTTGGGTTTTAGGGAGCAAATCTGTTTGGGCACCTTACTG
TTCCCATTTGTAGGTGGTAATTGGTGAGTACCTAATAAAGAGTTGGATTTTAGTGAAATG-TGCTGTGTCCTTCTGTTCC
ATTTTATTTGTGGAAAGCTACTCGTAGAAATTTGTATGAGCCAAACACCAGAAATTACTTCATGGCAAGTGAAAAGCAGT
GGTAAGTTTTTCCAAAAAAAGATTGATGGTGAATTTGTTTTGTGGGGTCAGGGCAAGCCCATAGCCAGACTCCAGATTGT
CCATCTCAACACTTGCTCAACCTCAACCACTAGTTCAGATATGCTGGGACATCCCATCCAGAACCATTTAGGTCCTTTGG
ACACTTGCACATCCAAAAAATATCTCCTTCCAGCAACAGGATGCAGCCTTAGGATTAGCTAGGCTCTCTTCTGATTCTCC
CCCAAG-TTTTGCTGTTCTTTATCTCATGACCACGATGATCGCAGCTAGCTCCATAGTGAAAGCCAACCTTCCTTGCTCG
TCAAGGATATCCTCCAGCTCAGACTTCTCATCTGGTCATTCTTGGCGCCCATTAGAGGCGGCAAAACATTACCGGGCGCA
TGGTGTGCGCTCGCTGCGGATAACATGTGCTGCCACTAAGACTGCAAAATCTCCAGGTACTGTGAATATGCTTGGCTCCT
TTTACTTGATATGGAACTGTTCGTTACTCTGTTTATGCATGATGCTATCTTGGCATGTTTACCCCC-TTTTTTTGCAGCT
GAAGAAGAATGGAAGATCAAACGGCAACTCCTAGTAGAGAAGCGGGTAATAACCTCCATTCTGACTGTTAACTATTTTTG
CATTAAACATATATGAAGGTTGCTGCG-AACTTCTTAACCTTAAGTCTTATGAAGAGGGTTAGAGT
>chr5B_574
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-------------GGACCCATTCACAGGTCAAATACCGCTTTGACTATGTCCATTTCAGCGAATCACTTGAGCAAACCCA
TCGAGGGATTACGTTATGCGACCGTTACTAGTA---TAGTGTCAAAAAAAATGTCTTATAAGGTCTTATAGTATTACGGG
CTGAGGGAGCTATCTCAAAAACAATCAACAACTCAAAAAAAGAATAAATGAAGCAGCGACAACGATCAGGTTAGTAGGTT
ACCAACCATTTTCTTCAGGGGAGCTGTTGGACATTTGCTCTAGGTAGATCGCA-CAAGGACCGCCAAAATCCGACGGC--
---------GGCGCTTGCGCCGCGGATCCAGCCGAGCCAGATCCACGCGGCACGTGACAAGTGACACGACGCTCGCTCAC
TCCACCCACACTCCCCGGCCGCCGCCGCCGGCCTCGTCAGTCGCAGATCCCCCAACCACCAGCAAAGCCGCCGCTCACCG
CCGATCGGCCCACATGGCCGCCTCTATCGCCGCCGCCGCCGCCGCCGCGTCCGTCTCCCACGTCCTTCCCGCGCCGAAAC
CCAAGCCCAGAACCCCACCCCGCCTCTCCCTCCTCCCCCGCAGGCGCTCCCGCGCCGCCGGGGCCATCTCCGCGTCCGCG
TCCGCGGCCTCCGACTTCCTCGCCCCGGTCCCGTCCCTCAAGTCCCGCCTCGCCGCGGGCGACACCCTCTACGGCCTCTT
CCTCCTCTCCTTCTCCCCTACGCTCGCCGAGATCGCCGCGCTCGCCGGCTACGACTACGTCGTTGTCGACATGGAGCACG
GGCCGGGCGGCATCACGGAGGCCCTCACCTGCCTCCGCGCCCTCGACGCCGCCCGCACCCCCGCCGTCCTCCGCCTCCCG
GAGGCCTGCCCCGTCTGGGCGAAGAAGGCGCTCGACCTTGGTCCCGCGGGCCTCATGCTTCCCGCCGTCGAGTCTCCGGC
CGCTGCCGCGGAGGCTGTATCCCACTGCCGCTACCCGCCCCGCGGCGTCCGTGGCGCTGCCTACCCAATCGTCCGCGCAT
CCGCCTACGGCCTCGACGACTCCTACCTCTCCCGCTGCGAGGATGACACCCTCATCATCTGCCAGGTCGAGACCGCCGCC
GGCGTTGCGGAGATCGACGCCATCGCCGCCGTCGAAGGGGTCGACGTCGTCCAGATGGGCCCGCTCGACCTGTCGGCGAG
CATGGGCTACCTGTGGGATCCCGGGAACAGGAAGGTGCGAGCGACCCTGAGGGAGGCTGAGAGGAAGGTGTTGGAGGCCA
GGAAGAAGAAGGACGCTGCTCCGAAGACCAATGCGGCTTACTTGGGTGGGTTTGCGATGCCCAATGACCCAGCTGAGCAG
CTCAAGCATAGGGGATACCATATGGTTGCAGGTGCAGTGGACATTGGGTTGTTCCGGAAGGCGGCATTGGAGGATGTCAA
GCGGTTCAAGGAGGCGTCAATGGAGATTGGTGAAGCAGAGGGCGAGGAGGAGGATGAGAAGGAAAATGGATACTGGAGTG
AATGAGCACTGAGCTTAGCTCACTGGGGAACTGGTGATGATTTCGTTTGTTTGTGTTCTGAACTGAAACTTTTAGGGTAT
CCATTTTCTGGACTTTGGTGTACTCTTGTTTAGTCGATGATTTGGGTTTTAGGGAGCAAATCTGTTTGGGCACCTTACTG
TTCCCATTTGTAGGTGGTAATTGGTGAGTACCTAATAAAGAGTTGGATTGTAGTGAAATGCTGCTGTGTCCTTCTGTTCC
ATTTTATTTGTGGAAAGCTA------GAAATTTGTATGAGCCAAACACCAGAAATTACTTCATGACAAGAGAAAAGCAGT
GGTAAGTTTTTCCAATAAAAGATTGATGGTGAATTTGTTTTGTGGGGTCAGGGCAAGCCCATAGCCAGACTCCAGATTGT
CCATCTCAACACTTGCTCAACCTCAACCACTAGTTCAGATATGCTGGGACATCCCATCCAGAACCATTTAGGTCCTTTGG
ACACTTGCACATCCC-AAAATATCTCCTTCCAGCAACAGT-TGCAGCCTTAGGATTAGCTAAGCTCCCTTCCGATTCTTC
CCCAAGTTTTTGCTGCTCTTTATCTCATGACCACGATGATCGCAGCTAGCTCCATAGTGAAAGCCAACCTTCCTTGCTCG
TCAAGGATATCCTCCTGCTCAGACTTCTCATCTGGTCATTTGTGGCGCCCATTAGAAGCTGCAAAACATTACCGAGCGCA
TGGTGTGCGCTCGCTGCGGGTAACATGTGCTGCCACTAAGACTGCGAAATCTCCAGGTACTGTGAATATGCTTGCCTCCT
TTGACTTGATATGGAACCGTTTCTTATTCTG-TTATGCATGATGCTATCTTGGCATGTTTACCCCCCTTATTTTGCAGCT
GAAGAGGAATGGAAGATCAAACGGCAATTCCTATTAGAGAAGCGGGTAATAACCATCATTCTGACCAA----TATTTTTG
CATTAAACGTATATGAAGGTTGCTGCGG-ACTTCTTAACCTTAAGTCTTATGAAGAGAGTTAGAGT
>SNPs
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSS---------S-------------------------------S-S-------SS--S--S-----S--
----S-S-----S----S------S-----S-SSSS-----------S----------------------------S---
-----S-------------------------------------------S---S--S-----SS----SS----------
-----------------------S---------------S-S------------------------------------SS
SSSSSSSSS-----S---S-------------------------------------------------------------
---S----------------------------------------------------------------------------
----SS--------------------------------------------------------------S--S--------
---------S------S---------------------------------S-S--------------------S------
--------------------------------------------------------S-----------------------
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----------------------------------------------------------------------S---------
-----------------------S--------------------------------------------------------
--------S---------------------------------------------------------------S-------
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--------------------------------------------S-----------------------------------
------------------------------------------S-------------------------------------
------------------------S----------------------------------------------S--------
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--------------------------------------------------------------------S-----------
-----------------------------------------------------------S------S-------------
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-----------------S-S-SSSSSSS--------------------------------------
>forward_146
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----------------------------------------------CCAAAATGCCATGGCCAACA--------------
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>reverse_1993
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------------------------------------------------------------------------AATGTCAA
GCGGTTCAAGGAG-------------------------------------------------------------------
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>forward_308
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------------------------------------------------CATCCACCTCGTCCGGAAAA------------
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>reverse_2203
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------------------------------------------CGGGTTTTAGGGAGCAAATCTG----------------
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