>input_sequence_62885
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-------------------------------------------------------------ATGACCCGACAA-------
--------------------------------------------------------------------------------
---------------------------------------------------------------ACCGGCTGCGGA-TCTG
CAGGTTCCCCGCTGCGCCTCTCCGAGCCGCCTGCCCTCCGCATAGGGCCTCCAACAATTGGAAGAAGAGCGCAGTTTGCT
GCCCTTGGCAGCCACATCATAGCCACAAGCCCCTCCGCCCATGAAATACCCCACGTACAAGAGGCCCACGGCAGTGCCAC
CCTCATCTTTGATACGAAGACATCTACGCTTACTACGT-----------CAAATATTTTACCGCAAGGTCTAGAAAACTG
CTATGATTCAGCCATAGCCGTCAGGAACAGACTATATGTGTTCGAATCATACAGCGACAACAACGACGGCACCGACGGTT
TATATTATTTTGGGGGCTTCCACTGCCTTTCTGCGGATCCGGACGATGATGAGAGGGACTGGACTTGGCGACCCTTGTTC
AATTCCTCGCGTTTCTCTTGGAGCTGGGCTAAGTTCGGTGGCAGTCCACCTGACTTTCCGTTTGATCCCAAGTTTATCAC
CTCGCTTGCCGTGCACCCGCGGACGGGCACCATCTTTGTTTCCGCTTGTAGGC-GGGGGGTCTGGTGTACATTGTCCTAC
GGCACGAGAGGTGGTGGCCAGTGGAAGCGCCGTGGTAATTGGGTGCTGCCATTCAAAGGCCCTGCCCACTATGATGGTTT
GCTCGACGCATGGGTCGGGCTCCACCTCCATTCCGCTGACACGGTTGATGCTGAGGGGTACCTTTGTGCATGCCACATCA
TCTCTGGCCGGCAGCCGCCAAAGAGGAAAGTGGGCAGGGAGCAGCTTTTTCTCAAGCAACCACACTGGAGACATCTCGAT
GCAAAACTCGTTTACATGGGTGAGGGCAGTAAGTACTGCCTCGTGGAGCACCTCCGACCTGAGGGAGCGGACACGATGAA
GTATGTGCTTCGTGTGACCACATTCATTGTCAAGTATGGCAAGGACGGTGAGCTCACGACCATGGCTCACCGGCCTGCTC
GCTTCTACAAGGCGCCCAGCTA------------TGACGTGCAAGCGTTTTGGATGTAG---------------------
--------------------------------------------------------------------------------
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------------------------
>chr3B_1_TraesCS3B01G460200
AACACAAATATGGAGTTAAATAAAGTTTGGCCTATGTACAGATGTATTATTAACGGGACTGATTTACACAGTAGCTGAAT
GCTCCATTAAGTCAGG-----AGTTATTTAATTGAGATTTAGGAGGGCAACCCAAGTGAAGT-------------GCTAC
ACTTGATGGCCCATGTATAGCCTGCAAATTAGGGGTAAATGATGGCGTAAAGCAACTCACCTTGCAATAATA---TATAC
ACACAGCAGGGAGGAATTTTAAAATTGTGCATCCTACGAGTTAT------------ATATACATGTAATAAAACCTGCAA
TTAGCAGAAACACAACCATGCACTTTGCTTCAGGAAGTAATTGAACAGGACG----------------------------
--------------------------------------------------------------------------------
-----------------AAAGAAGAAAGAGAAAAGCTGGGCTGTATGTG-------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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-------------------------------------------------------TCGAATTTGAAAAGGTAGCAGTAAA
TTGTATACTGAAGGTTAGTC------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------CGCGAGGAGAACGAGCGATTCGT--------------------------------------GTTTTATTTCCGC
GAATATATGGTGAAAAGCCCAAGTAACCACAGTGGGCCAAATTGATGCCGAG-AGGAGCATCCCCCCAACAGCTTGTGCC
GGTGCCGATGAATAGCTCATTGTA-----------GATCATCCGACGGCTAAAACGTAGAGGTCGTGACACAGACGCCCT
CATCTCATCTTTGGTGCAGTTTTACCTCCCCGCTTCTTCCAGATATTGTGGCGGCGGCCGACGTCTTCAACCTCTTCATC
GTTTCGAGGTCAGGCGGCTGCTCCTGGTTTTATAGATCG--AATGTCGAATCTCCGGCACCTCCTTCGGTTCCTCGGCAC
CTCATCCCGATCTCCGTCGAAGTCAGCAGGATGGGGGCGGAGGGAGGCAGCAGGGAGAGGTCGGATCTATGCACCGCACC
TGCACGAACCAGCAAGATTCATCCTTTCCTCCGGGTTGGGTCAGGCTCGCCACTTTGGGACAGCCAAGC-----------
--------------------------------------------------------------------------------
------------------------------------------------AACGGCGCCAACAGCAGACCACGAAGCAGCAT
CTGTACCTGGCACTTGATGACCACGCTGACGGATTCAACATCCACAAGCTGGACATGGACAATGACCCGACAA-------
--------------------------------------------------------------------------------
---------------------------------------------------------------ACCGGCTGCGGA-TCTG
CAGGTTCCCCGCTGCGCCTCTCCGAGCCGCCTGCCCTCCGCATAGGGCCTCCAACAATTGGAAGAAGAGCGCAGTTTGCT
GCCCTTGGCAGCCACATCATAGCCACAAGCCCCTCCGCCCATGAAATACCCCACGTACAAGAGGCCCACGGCAGTGCCAC
CCTCATCTTTGATACGAAGACATCTACGCTTACTACGT-----------CAAATATTTTACCGCAAGGTCTAGAAAACTG
CTATGATTCAGCCATAGCCGTCAGGAACAGACTATATGTGTTCGAATCATACAGCGACAACAACGACGGCACCGACGGTT
TATATTATTTTGGGGGCTTCCACTGCCTTTCTGCGGATCCGGACGATGATGAGAGGGACTGGACTTGGCGACCCTTGTTC
AATTCCTCGCGTTTCTCTTGGAGCTGGGCTAAGTTCGGTGGCAGTCCACCTGACTTTCCGTTTGATCCCAAGTTTATCAC
CTCGCTTGCCGTGCACCCGCGGACGGGCACCATCTTTGTTTCCGCTTGTAGGC-GGGGGGTCTGGTGTACATTGTCCTAC
GGCACGAGAGGTGGTGGCCAGTGGAAGCGCCGTGGTAATTGGGTGCTGCCATTCAAAGGCCCTGCCCACTATGATGGTTT
GCTCGACGCATGGGTCGGGCTCCACCTCCATTCCGCTGACACGGTTGATGCTGAGGGGTACCTTTGTGCATGCCACATCA
TCTCTGGCCGGCAGCCGCCAAAGAGGAAAGTGGGCAGGGAGCAGCTTTTTCTCAAGCAACCACACTGGAGACATCTCGAT
GCAAAACTCGTTTACATGGGTGAGGGCAGTAAGTACTGCCTCGTGGAGCACCTCCGACCTGAGGGAGCGGACACGATGAA
GTATGTGCTTCGTGTGACCACATTCATTGTCAAGTATGGCAAGGACGGTGAGCTCACGACCATGGCTCACCGGCCTGCTC
GCTTCTACAAGGCGCCCAGCTA------------TGACGTGCAAGCGTTTTGGATGTAGTCCATGCTCAAGCTTGTTCAT
CTACCAACTTTTCATGTTTTCTGCTTTTTTTTGCCCCTTCTATTTGATGAGCTGCCGTTTGTAGGTTCTTAATGATGATA
AGAGTTAATGTGTCATATCAAATTCGATGGTGGCTCTCTTATCTGTTA---TACGACTAGGTTTTATTACATCTGATAAT
TTGCTCCCAAACAATATGCGCCTCATAATACTTATGTTCATGATGTTATGGAATTTAGCCTCGCATTAGAGTAGCGTTCG
TAAAAATGCTACCCCCTTGTCTGGTTTAGATATACTTTTGTAACTTCTGTGGTAACTTACTAACTTTGTTTCACTGTTGG
TGTTTGATGATAATAATGTATCGTAAATATGATGAAGTGTGATCCATTTGAGGATTGCTTGTATAGTTGTTTCCTTACCA
AAAGCATATGAGCTGCAGATGTAAAAGATAGAAAGATCCACAGAAACTCCAAAGTTGCCGTTAAGAATTGAAAAACCTAG
GTTTGCTAACCTCTCGAATTTGTGAAGCAAAAAGGAGGAAACTTAGTTTGTCTACTATTGCTGTGAAGAGACATGGTTCT
GGTGCCGACTTTGCTAATGTATTCCTTGCAAGCATTTATTGCATGATCTACTTTAGAGCAACTACAAAGGTATCTTCATC
AGTCAGCAAATCAGTATGTACTACACGAGAAGATTTCTAGTGGTACCGGGCCTTAGCTGATACTCTACAATGGATATAGG
--TAGGATCAGCATCCTTTATTAGTGTTTTGATATCTCTCTTAGTGATAGCGTCCCGGATTCCTTTACCTGGATCTGGGC
CCGACCTGGGCACTACTCTGCTAGTTATGTCTACGATATGCTTTGCCAAGGAATCACACAATTCTCTGAGGCTGTGTGTA
CTGTGTACATTGAAATGTTAGGCGCCTTTAAAATGCAAGATCTTTACTTGGCTAGCGTTGAAATATAGTCTGTGGGCGTC
GGACAGGCGACTCCGCCATGAACT
>chr3A_1
AACAAAAATATGGTGTCCAATAAAGTTTGGTCTATGTACAGATGTACTATTAGTGGGGCTGATTTACATAGTGGCTCAAT
GCTCTATTAAGTCATAA------TTATTTAATTGAGATTTAGCCGGGCAACCCAACTGAAGT-------------GCT--
-----------CATGTATATCCTGCAAATTAGGGGTAAATGATGGCGTAAAGCAACTCACCTTGCAATAATACTATATAC
ATACAGCAGAGAGGAATTTTAGAATTGTGTATCCT----AGGAAGACCAATATTCGATATACATGTAATAAAACCTGCAA
CTAGCAC--ACACAATCATACACTTTGCTTCAGGAAGTAATTAAACATGACG----------------------------
--------------------------------------------------------------------------------
-----------------AAAGAAGAAAGAGAAAAGCTGGGCTGTATGTG-------------------------------
--------------------------------------------------------------------------------
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-------------------------------------------------------TGGAATTTGGAAAAGTAGTGGTAAA
TTGTGTACTGAAGGTTAGTCCATCAACCTTAG------------------------------------------------
-----AAAAACCTCATGGATAAATTGTCGAAAAGACAGTGTTTTTAACTGTTAAAATTTATCATGAAAATTTGGTGGGTC
ATCCAGATCCGAATCTAAGAGCTTGAGGCAGTGGCAGCAGAGATTCATCCCCGCCTACGATTCATCCATGTCGCAATGGA
GAAGGTCGCGAGGAGAGCGAGCGAGCGAGCGATTCGTTTCGGTTTTTTTTTCGTTTCGTGTGCTTCAGTTTTAGTTCCGC
GAA--------------CCCAAGTAACCACGGTGGGCCAAATTGATGCCGAGGAGGAGCATCCCCTAAAG---TTGTGCC
GGTGCGGGATCTGACGGCTATAAACAGTTACATAGGATCATCCGACGGCTAAAACGTAGAGGTCGTGAGAGAG-----CT
CATCTCATCCTTGGTGCAGTTTTACCTCCCCGCTTGTTCCAGACATTGT---GGCGGCCGACGTCTCCAACCTTTTCATC
GTTTCGAGGTCAGGCGGCTGCTCCTGGTTTTATAGATCGAAAATGTCGAATCTCCGGCACCTCCTTCGGTTCTTCGGCAC
CTCATCCCGATCTCCGTTGGAGTCAG---GATGGTTGCGGAGGCAGGCAGCATGGAAAGGTCGGATCTATCCACTGCACC
TGCACGAGCCAGCAAGATTCATCCTCC---CCGGGTTGGGTCAGGCTCGCCGGTTTGGCACAGCCAACC-----------
--------------------------------------------------------------------------------
------------------------------------------------AACGGCGGCAGCAGCAGACCACGAAGCAGCAT
CTGTACCTGGTACTTGATGACCACGTTGACGGATACAGCATCCACAAGCTGGACATGGACAATGACCCGG-AA-------
--------------------------------------------------------------------------------
---------------------------------------------------------------GCCGGCTGCGGCTTCTG
CAGGTTCCCCGCTGCGCCTCTCCGAGCCGCCTGCCCTCCGCATAGGGCCTCCAACAATTGGTAGGGGCTCACAGTTTGCT
GCCCTTGGCAGCCACATCATAGCCACATGCCCCTCCGCCATGGAAATACCCATGGTACAAGAGGCCCAGGACTGTGCCAC
CCTTATCTTTGACACGAAGACAGCTACGCTTACCACGT-----------CAAATATTTTACCGCAAGGTCTACAAAAGTG
CTATGATGCAGCCATAGCCGTCAGGAACAGGCTATATGTGTTTGAATCATTTAGCGACAACAACGACGGCACCGACGGTT
TATATTATTTTGGGGGCTTCCACTGCCTATCTTCGGACCCGAATGATGATGAGAGGGACTGGACTTGGCGACCCTTGTTC
AATTCCTCACGTTTCTCTTGGAGTTGGCCTAAGTTCGGTGGCAGTCCACCTGACTTTCCGTTTGATCCCAAGTTTATGAC
TTCGCTTGTCGTGCACCCGCGGACGGGCACCATCTTTGTTTCCGCTTGTAGGAGGGGGGGTCTGGTGTACATTGTCCTAC
GGCACAAGAGGCGATGGCCAGTGGAGGCGCCGTGGTAATTGGGTGCTGCCATTCAAAGGCCCTGCCCACTATGATGGTTT
GCTCGACGCATGGGTCGGGCTCCACCT---------TGACACGGGTGATGCCGATGGGTACCTTTGTGCATGCCATATCA
TCTCTGGCCGGCAGCCGCCAAAGTGGAAAGTAGGCACGGAGCAGCTCTTTCTCGAGCACCCACACTGGAGACATGTCGAT
GCAAAACTCGTTTACATGGGTGAGGGCAGTAAGTACTGCCTCGTGGAGCGCCTCCGACCCGAGGGAGCGGACGAGATGAA
GTATGTGCTTCGTGTGACCACATTCATTGTCAAGTATGGCGAGGACGGTGAGCTCACGACCATGGCTCACCGGTCTGCTC
GCTTCTACAAGGCGCCCAGCTA------------TGATGTGCAAGCGTTTTGGATGTAGTCCATGCTCAAGCTTGTTCAT
CTACCAACTTTTCATGTTTTCTGCTTTTTTTTGCCCA-TGTATTTGATGAGCTGGTGTTTGCAGGTTCTTAATGATGATA
TGAGTTAATATGTGGTATCAAATTCGATGGTGGCTCTCTTAGCTGTTGTACTACGACTAGGTTTTATCACATTTGATAAT
TTGCTCCCAAACAATATGTGCCTCACAATACTTCTGTTTATGTTGTTATGGAATTTAGCCTCGCATTTGAGTAGCGTTTG
TAAAAATGCTACCCTCTTGTCTGGTTTGGATAAT-TTTTGTAACTTCTGTGGTAAATTACTAACTTTGTTTCACTGTTGG
TATTTGATGATAATAATGTATCGTAAATATGATGAAGTGTGATCCATTTGAGGATTGCTTGTATAGTTATTTCCTTACCA
AAAGCATATGAGGTGCAGATGTAAAAGATAGAAAGATCCACAGAAACTCCAAAGTTGCCGTTAAGAATTGAAAAACCTAG
GTTTGCTAACCTCTCGAATTTGTGAAGCAAAAAGGAGGAAACTTAGTTTGTCTACTATTGCTGTGAAGAGACATGGTTCT
GGTGCCGACTTTGCTAATGTATTCCTTGCAAGCAT-TATTGCAGGATCTGCTTTAGAGCAACTACAAAGGTACCTTCATC
AGTCAGCAAATCAGTATGTACTACACGAGAACATTTCTAGTGGTACCGGGCCTTAGCTGATACTCTACAATGGATATAGG
TATAGGATCAGCATCCTTTATTAGCGTTTTGGTATCTCT-TTAGTAACAGCATCCCGAATTCCTTTACCTGGAGCTGGAC
CCGATCTGGGCACTACTCTGCTAGTTATGTCTATGATATGCTTTGCCAAGGCGCCACACAATTCTCTGAGGCTGTGTGTA
C-------ATGGAAATGTGGGGTGCCCTTAAAATGCAAGATCTTTGTCTGGCTAGCGTTGAAATATAGTCGATGGACGTC
GAACAGGCGACTCCGCCA------
>chr3D_1
AACACAAATATGGAGTTAAATAAAGCTTGGTCTATGTACAGATGTACTATTAATGGGACTGATTTATATAGTAGCTGAAT
GCTCTATTAAGTCATACTTATAGTTATTTAACTGAGAATTAGCAGGGCAACCCAACTGAAGTGCTACACTGGATGGCT--
-----------CATGTATATCCTGCAATTTAGGGGTAAATGATGGCGTAAAGCAACTCGCCTTGCAATAATA---TATAC
ATACAGCAGGGAGGAATTATAGAATTGTGTATCCTAGCTAGGAAGACCAATATTCGATATACATGTAATAAAACCTGCAA
TTAGCAGAAAG--AACCATACACTTTGCTTCAGGAAGTAATAAAACGGGCCACTGCTAGGCGTCATCCGACTGACGCGGG
ACAAGAAATCAACTGCCTCGTGGGCCGTTAGATCAGGCGTTGTAGGGCCATTGGATCACACCAGGCAACTACTCCCGCAT
GCACTCCGCATCACAAAAAAGAAGAAAAAGAACACCACATCGAGGAACGAAAAATACAGCACCGCGCAACACTTTTAGCT
GCCACTCTCGAGCTTCATCGTAGCACCGCTGCCATGCTCTGCAGCGCTAGCACCGGCGCGGTTGGCGGTGCTCCATCCGG
AGCTGCTCTGCAGCGGTCATTGATGCCGCCGGAGCTGCGATGCAGCGGTCGTCGACACCACCGGAGTTGCACTGCAGCGG
CCGCGACACCGCCGAAGCTGCTATGCAGCGGTTGTCGATGCCGCCAAAGCGGCTATGCAGAAGGCGTCGATGCCGCCGGA
GCTCTCTAGCAGCACACGCCCCCCTCCTAGGAAGAACGCCACCTAGACATTTCAACACAACACCGGGACACCGCCGGCGA
GCTCTCCATTGCAGCTCCGGCGAGATGCATCGCAGCTCCGAGACCTCAGTTGAGTGCTCCATTGCAGCGTCCGGAGCGGC
GGTGAGCTCTCCATTGCAACACCGGGAGGGAGCGCCGGAGATACATTGCAGCTCCGGCGAGATGCATCGCAGCTCGGAGA
CCTCCGTTGAGTGCTCCATTGCAGCGTCGGGAGCGGCGGCGAGCTCTCCATTGCAGCGGCGGGAGGGAGCGCCGACGAGC
GCTCCATTGTAGCTCCGACGAGATGCATCGCAGCTCCGAGACTTCCGGTGAGCGCTCCATTGCAGCGCCGGGAGCGCCGG
TGAACGCTCCAAACCATTGCAGCGGCGGTGAGCTCTCTCTCCATTGCAGCACCGGGAGGGAGCGCCAGCGAGCTCTCCAT
TGCAGCCACGCAGCACCACCGAAGTTGCTACCACGCTGTCACACAGTAGTACAAAACAGGGCTTTCNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNACAAAAAAAAATGATGGAAATGTCAATAAAATAAAATAAAATAAGTTTCCCATGTGATATGTGGTC
TAGTTGTTGGGAAAATTTACAAATATGAATTTCGACTTTATTTGCAAAATCTCTCTGGAATTTGTAAAATGGGCATAACT
TTTGCATACGAACTCGGATTAAAAAGTTTTTTATATGAAAAATCATCTACTCGGATTAATTAGTTTGACCATTTTCAAAA
TCCTCAAAAACCTAACAGAAAAAAAGTTACGGGGCTTTTAAGATCTGGAGAGGCAAAGAAATTCAAAAAAATTCAAACTG
TGGTCAAACGTGGTCAAACAATGGTCAAACTAATTATTCTAGAATATTAGTGTTACTAAATAATTA--------------
------------------------------------TTTCAGTTTTTTTGAATTTTGGTCAAATCTGGTCAAACTGTGGT
CAAACTAATTATTCCAGAAATATTAGTGTTACTAAATAATTATTGTTTTTTAAAACAATAGTTTCAAACTCAAACAGTGA
AATGTGTCACTTCATGCTCAAGCTAAATTCCTGAGGGTTAATAGGATTGACATCTTACTATTGTCAGGAAAACAACAAGT
GCAGACTTGGAAATGAGGGAGAATAGAATCCGGAAGTTAAGCGTGTTCAGGCTGGAGTAGTGAGAGGATGGGTGACCGTC
CGGGAAGTTAGATGATTTGGAATGATGAGGGGTGATTAGAGATTAGAGGATAAATTGAGCAGTGATGAGGGGTGGTGATT
AGAGATTAGAGGTTAAAATAATTCAGAAATTTGAAAATCAAAAAAAAATTCGCAAAATTTTTTTTTAAAAAAAAAATCAT
AAATT----------------TCCTTTAGTCCCGGTTGGTGAAGGTGGAGCTTCACGTGGCCGCGGCCTTTAGTCCCGGT
TCGTGTAAGAACCGGGACTAAAAGGGGGAGGCATTAGTAACGACCCTTTAGTCCCGGTTCAGACAAAAGCCCCTTTTTTT
ACCAGTGACAGCAGGACATCGCAGTAATTTGCCGTCGCTACTGCACAAATCGCCGCCAGCCGTGGGCGCCGTCGCAGCAG
TGGTGCTGCTGCAAAAAAACAGGTGTTGCAGGCCGCGCACCGGAATCTCGGAGCCGAGGGCTGGAGTCGCCCTGCCCCGA
CCTTGCAACAGCCGTGCTGTTGTGGTCGCCGGCGTCGCCCATCCCCTTTTGCAGTCGCAGCCCGTCGAGGATGCAGCGGT
GATTTAGTTGCGTCGTCCGCTCTATGTTTGACGGGGTTGGGCGGAGGATGCATCAAGGCGCCTGCCGGCGGCAGCCCCTG
CCGATTCCTAACTGCTGTGGTGGTGCTCTCCATGGGTCCTCTCCTCTGGCTCAGGGGAAGAAAAGAAACCTGTGGAGGAG
GCAGCTTCGTGGCTATAGAGATAAGGTTGGGGGAAGGAAGCGGTGGGACGGCTGACACAGGGCACGTGGCGCGTGGAGGA
GGGGGTTTACGAGACGTAGAAATCAGTCGGTAGATTTAGATACTTTTCCCAAATATTTTACCGGAAGGTCTAGAAAACTG
CTATGATGCAGCCATAGCCGTCAGGAACAGGCTATATGTGTTTGAATCATACAGCGACAATAACGACGGCACCGACGGTT
TATATTATTTTGGGGGCTTCCACTGCCTTTCTGCGGATCCGGACGATGATGAGAGGGACTGGACTTGGCGACCCTTGTTC
AATTCCTCACGTTTCTCTTGGAGTTGGCCTAAGTTCGGTGGCAGTCCACCTGACTTTCCGTTTGATCCCAAGTTTATCAC
TTCGCTTGT------CCCGCGGACGGGCACCATCTTTGTTTCCGCTTGTAGGAGG-GGGGTCTGGTGTACATTGTCCTAC
GGCACAAGAGGCGGTGGCCAGTGGAGGCGCCGTGGTAATTGGGTGCTGCCATTCAAAGGCCCTGTCCACTATGATGGTTT
GCTCGACGCATGGGTCGGGCTCCACCT---------TGACACGGGTGATGCCGATGGGTACCTTTGTGCATGCCATATCA
TCTCTGGCCGGCAGCCGCCAAAGTGGAAAGTAGGCACGGAGCAGCTCTTTCTTGAGCACCCACACTGGAGACATGTCGAT
GCAAAACTCGTTTACATGGGTGAGGGCAGTAAGTACTGCCTCGTGGAGCGCCTCCGACCCGAGGGAGAGGACGAGATGAA
GTATGTGCTTCGTGTGACCACATTCATTGTCAAGTATGGCGAGGATGGTGAGCTCACGACCATGGCTCACCGGTCTGCTC
GCTTCTACAAGGCGCCCAGCTATCATTGTCACTTTGATGTGCAAGCGTTTTGGATGTAGTCCATGCTCAAGCTTGTTCAT
CTACCAACTTTTCATGTTTTCTGCTTTTTTTTTGCCCTTGTATTTGATGAGCTGGTGTTTGTAGGTTCTTAATGATGATA
AGAGTTAATGTGTCGTATCAAATTCTATGGTGGCTCTCTTATCTGTTA---TACGACTAGGTTTTATTACATCTGATAAT
TTGCTCCCAAACAATATGTGCCTCACAATACTTCTGTTTATGTTGTTATAGAATTTAGCCTCACATTAGAGTAGCGTTCG
TAAAAATGCTACCCTCTTGTCTGGTATGGATATACTTTTGTAACTTCTGTGGTAAATTACTAAGTTTGTTTCACTGTTGG
TGTTTGATGATAATAATGTATCGTAAATATGATGAAGTCTGATCCATTTGAGGATTGCTTGTATAGTTATTTCCTTAC-A
AAAGCATATGAGCTGCAGATGTAAA---TAGAAAGATCCACAGAAACTCCAAAGTTGCCGTTAAGAATTGAAAAACCTAA
GTTTGCTAATCTCTCGAATTTGTGAAGCAAAAAGGAGGAAACTTAGTTTGTCTACTATTGTTGTGAAGAGACATGGTTCT
GGTGCCGACTTTGCTAATGTATTCCTTGCAAGCAT-TATTGCATGATCTGCTTTAGAGCAACTACAAAGGTATCTTCATC
AGTCAGCAAATCAGTATGTACTACACGAGAACATTTCTAGTGGTACCGGGCCTTAGCTGATACTCTACAATGGATATAGG
TATAGGATCAGCATCCTTCATTAGCGTTTTGATATCTCTCTTAGTAACAGCATCCCGGATTCCTTTACCTGGAGCTGGAC
CCGATCTGGGCACTACTCTGCTAGTTATGTC----------------AAGGCACCACACAATTCTCTGAGGCTGTGTGTA
C-------GTGGAAATGTTGGGCGCCTTTAAAATGCAAGAACTTTACCTAGCTAGTGTT--AAAATAGTCTGTGGACGTC
GGACAGGCGACTCCGCCATGGACT
>SNPs
------------------------------S---------------S------S--------------S-----------
----S---------SS--------------------------S------------S----------------------SS
SSSSSSSSSSS--------S------------------------------------------------------------
-S-------------------S-------S------SSSSSS-S------------------------------------
-------------------S----------------------S-------------------------------------
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--------------------------------------------------------S-------S---S-----------
----S---------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------S-------SSSSS--------------------------------------------S------
---SS--SSSSSSSS--------------------------------------------------SS--SSSS-------
-----S-SSSSSS-SSS-SS--S---------------------------------------------S-S---SSSS--
---------S-------------------------S------------------------------S------S------
------------------------------------------------------------------------S-------
-----------------S--------S-S-----SS-------S--------S---S-------------S---S-----
-------S-------------------SS----------------------SS--------------S------------
--------------------------------------------------------------------------------
----------------------------------------------------------S---------------------
----------S--------------S--------S--S-------------------------------S----------
--------------------------------------------------------------------------------
---------------------------------------------------------------S----------S-----
----------------------------------------------------------------S---S-S---------
---------------------------S-----------SSS----------SS--------------S---S-------
---S--------S--------------------S----------------------------------------------
-------S----------------------S-----------S-------------------------------------
--------------------------------------------------------------------------------
--------S--------------S---S----------------------------------------------------
S-------S-------------------------------------------S---------------------------
-----S-----S-------------S------------------------------------------------------
---------------------------SSSSSSSSS--------S------S--S--------------------S----
-----------------------S-------S----S---------S------S----S---------------S-----
-------------------------------------------------S---------S------------SS------
----------------------------------------S--------------------------------S------
-------------------------------------S------------------------------------------
---------------------------------------S--------------SS------------------------
--------------S-----------------------------------------------------------------
------------------S------S-------S----S---S-------------------------------------
--------------S------------S---------------------------S------------------------
--------------------------------------------------------------------S-----------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------S-------------S------------------------------
-------------------------------S------------------------------------------------
------------------------S--------------------S-S---S---------------------S----S-
----S----------------------------S-----------------S-S--------------------------
-SSSSSSS--S--------S---------------------------S---------------------------S----
--------------------S---
>forward_2179
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-------------------------------------------------------------------------------C
GGTGCCGATGAATAGCTCA-------------------------------------------------------------
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>reverse_3958
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-------------------------------------CGTGCAAGCGTTTTGGATGT-----------------------
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------------------------
>forward_3676
--------------------------------------------------------------------------------
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--------------------------------------------------------GGTACCTTTGTGCATGCCAC----
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------------------------
>reverse_4805
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----CCTGGGCACTACTCTGCTAG--------------------------------------------------------
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------------------------
