>input_sequence_62881
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-----------------------GCATATATACAAGGCGGTCGCTGGCTCCTGCAATATAAGTCGATCTGCTTGGGGG-A
CAGATCGGCCTCAACAATCAATCAATCATGGAGAAAGAATCGACCCATGTTGACTGGGGAGGGGTTTTCTGGTTTAGCTG
GTTTTCCTTCGTGATTGGAGTTGGTACGGTTCCCC-CCTTCTCCTTCGCAGCATCGTTTTTTGCATCTG---TAATCATC
AATCTGGTTCCAGGTTTGTGTATTTTTCGCTTTATTACAAGCTTTCAAATCAAACAGGTGCAGGCGTGCTCCTGCTCGCC
CTCATCAACGCGTTCAGGAGTTCCTACTGGGACGTCTACTCCCTCGAGCTCACCGGCATCGACGGCCGTGGCCAGCCGGC
GGGGCTCAGCGCCCTGGCGTTCAACGTGACCCTGCACGCGGAGAACAGGCGGACGAAGTGGGTGGGCAACAGCTTCAGCG
ATGGGAAGGTGGTGGTGTCCTACGCGGGCGTCGCGGTAGCGGAGGGCCGCGTGCCGGGCTTCAGCGTCGGGGCGAAGAGC
GCGGCGGAGGTGGAGGCGGTGGCGCTAGGCGGCAAAGCTGCAGGCGTGGCGGACGCCG---TGAGGAGGCGCGTGGAGGC
CGAGCTGCGCTGGGACTCCGCGGAATTCGACGTGGAGGCCAAGCTGTTCCGCAGCGGCGTCGGCCAGCAAGGTGGCCCCG
TCGTGCTGTGGTGCAAGGTTGCATCGCGTGTACTGCATCAGCCGTCACGGTGCAGGACCTTCACCGACTTCATGACTAGG
GCAGACCAGGAGTTTTGACCGATCTG-----CGTGCGTGCAGCACGAATTCCCAGCGTATGCGTCTG------TTATTTT
CATATTCATAGTTTTCTTCAAGAAAAGTATGTTCTTGGTT-CTTAAGTTTCTCAAAAGTATAGACTT--TCGCTTAA-GA
TTTTTAGG-TATATATTTGGCCTTTTTAAGTCTCAAAACCGGATAAGTTTGGTTTAAAACCAGATTTTG--AGCATGTTG
ACCAGG-----------GTT-----------------------------TGAGCAGGTTTGATTGATAAACA--------
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>chr2D_1_TraesCS2D01G379900
ACGCCCTGGCATGGGGACGGCGGCGCCGCTGCCCCACGAGCCAACGCCGCCATGCACGACGCGAACGACCGGTGCTTCGG
CGAGACGACGCGAACCTCTACCTGCACCGCGCCGCCAGCGTGCTTCTCGTCCGCCATGCGCTCGGCCAGCTCCCCCGGTA
GACCCACCCCTCCGCTCGCGGCGACGATATGGAACTTCGTGGAGCACTTGGGCGGCACGCACAGATCCTGCACGCCACAG
CCGGCGAGTGGCACTCCTCCGTATAAGACCACTGCCTCGCCGCCCACGCAGGCCTCGGACTTGCCCCCGAAGTTGTTGAT
GACCACGGTGAGATTGAACGTCCGCGCGACGTGGTCCTCGAGGTCGGAAAATCCGTCCATGACCACGGAGAACTCCGGTA
GCCGGGATGCCTCCAAGCCGACGAGACCCAGAGCAAGGACCCAAAAAAGCAGGCCGACTATACACAGAACGAAGACCATG
ACTAGCATATCCATGGCAGTCACCGTACCCGTTTGGCTGCTTGTTCCGGCGCTCCATCGAAGGTTGTTCGTCGCTCCGGC
CGTGCTGCAGAAGTTTTGCCTCCATGGTGCAGTGGGTCGATGTATTCACGCGCGCGGCTAGAGTGAGAGTTAATTAAAGA
TAAAGATGTCTCGTTTCCTGTCCTCGGGTACATTATGCTATATATATAACCCACAGTCCCAGACAGCCCGGATCGATCAC
GTTCCCTTGTGGAGTTCATGTAGGATT-----------------------------------------------------
----------TGACCGTAAGATGATTAAGTTGTGCATATCGATTTCGGAGAAGGCTATCAATCGATTGAGTTCCCCTGTG
GGGGAATCGCTACCGGAATGGTGCGCACTAGAGATCGATGGTACCAGTTTTTTTTTTTTTCTCTTTTTTTGGTTTGCTGC
GGGGATTGTTACGAGTTTGATTGAGACAAAATATGAGGTCTCCAATTGTAACCCAACTCTTGCACGTACACGCACCTCCA
TAATTTTATTTTTTTATTTTTTTGCATATATACAAGGCGGTCGCTGGCTCCTGCAATATAAGTCGATCTGCTTGGGGG-A
CAGATCGGCCTCAACAATCAATCAATCATGGAGAAAGAATCGACCCATGTTGACTGGGGAGGGGTTTTCTGGTTTAGCTG
GTTTTCCTTCGTGATTGGAGTTGGTACGGTTCCCC-CCTTCTCCTTCGCAGCATCGTTTTTTGCATCTG---TAATCATC
AATCTGGTTCCAGGTTTGTGTATTTTTCGCTTTATTACAAGCTTTCAAATCAAACAGGTGCAGGCGTGCTCCTGCTCGCC
CTCATCAACGCGTTCAGGAGTTCCTACTGGGACGTCTACTCCCTCGAGCTCACCGGCATCGACGGCCGTGGCCAGCCGGC
GGGGCTCAGCGCCCTGGCGTTCAACGTGACCCTGCACGCGGAGAACAGGCGGACGAAGTGGGTGGGCAACAGCTTCAGCG
ATGGGAAGGTGGTGGTGTCCTACGCGGGCGTCGCGGTAGCGGAGGGCCGCGTGCCGGGCTTCAGCGTCGGGGCGAAGAGC
GCGGCGGAGGTGGAGGCGGTGGCGCTAGGCGGCAAAGCTGCAGGCGTGGCGGACGCCG---TGAGGAGGCGCGTGGAGGC
CGAGCTGCGCTGGGACTCCGCGGAATTCGACGTGGAGGCCAAGCTGTTCCGCAGCGGCGTCGGCCAGCAAGGTGGCCCCG
TCGTGCTGTGGTGCAAGGTTGCATCGCGTGTACTGCATCAGCCGTCACGGTGCAGGACCTTCACCGACTTCATGACTAGG
GCAGACCAGGAGTTTTGACCGATCTG-----CGTGCGTGCAGCACGAATTCCCAGCGTATGCGTCTG------TTATTTT
CATATTCATAGTTTTCTTCAAGAAAAGTATGTTCTTGGTT-CTTAAGTTTCTCAAAAGTATAGACTT--TCGCTTAA-GA
TTTTTAGG-TATATATTTGGCCTTTTTAAGTCTCAAAACCGGATAAGTTTGGTTTAAAACCAGATTTTG--AGCATGTTG
ACCAGG-----------GTT-----------------------------TGAGCAGGTTTGATTGATAAACAGTAAATTC
AAAA--AATAG--CAAAAA-----ATTTATAAA-AAA----AACTGAAATTTTGTGACAA-CAACATGCTTGGGTGCGTT
TGGTGCGTGTAAATAGTTGTGGTC-AAATAACATCCGATGAGCTCTATAAAAAAAC------AAA--CAAATTTTGCCTT
CTTT--GTGA---GCC-AAAATTAG--TT-TTTTTTTTGCCACGAACTCCTCGGATGTCGAAATA-CCACACAAATTTTC
-A---------CGCA-CCCGAGCATCTTGGTTGCCACAAAATTTTAGAGTTTTT---------TTTTGTTTTTTTGTTTT
TTGCTATTTTTTGAATGTACTATTCATCAATCAAACCTGGTCAACATGGTCGTGGTCAAA--------------------
CCCTCTCAACGTGCTTAAGATCTTGTTTTGGACCAAACTTT---AGTTTTGAGACTTGAA-GGACCAAATGTATACCAAA
AAATCTTGAGGGACCAAGTCTATACTTTTGGGGAACTCGAGGGACCAAAAACATTTTTTT-TTCTTTTTCTTTAGGG---
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GAATATGGGGTGCTTTATTCAGATAAAATAGCTCCAGAATCTGCTATGAGGCTTGTTACAAGAAAACTACTCTCTCCGTC
CCATAACATAAGAC-------------------TTTTTTGAAAATACACTAGAGTCAAAAAAGGTCTTACATTAGTCAAA
AAA-GTCTAAAATTAACGTCTTACTATATGACAGATGGGGCCCGCCAGGCAGGCTGACGTGGCACTACTTAACATCTCAG
ATTTAACGGCAACGTTTGGTAATGTGTGGCCCTATGGGGGTCCACCTGTCATTGGAAGGGAAAAAAGAGAAAAAAT--TG
GTTTTAGCCCGACTAGCGGGCCCCATCTATCATAAATACGCTTAACCGAGCTAAAGCCGCCGATCAATGTTATTTGCAAA
AAAGATTACCGTAGACATAGTGTTTTTTGCCAAAA--AAAA-TGTAAACTCGTGTTTTCTGCTAATCTAGCCTTCAACAT
GATGGTTTTGTGCAATTTACTGCCACACCGAACAAGTGGCCAAAAAAGCGATGGGAAGG
>chr2D_1
ACGCCCTGGCATGGGGACGGCGGCGCCGCTGCCCCACGAGCCAGCGCCCCCATGCACGACACGAACGAGCGGTGCTTCGG
CGAGACGACGCGAACCTCTACCTGCACCGCGCCGCCAGCGCGCTTCTCCTCGGTCATGCGGTCGGCCAGCTCCCTCGGTA
GGCCCACCCCTCCGCTCGCGGCGACCATAGGCAACTTCGTGGAGCACTTGGGCGGCACGCACACATCCTGCACGCCGCGG
CCGGCGAGTGGTACTCCTCCGTATAAGACCACTGCCTCGCCGCCCACGCAGACCTCGGACTTGCCCCTGAAGTTGCTGAT
GACCATGG-GAGATTGAACGTCCGCGCGACGTGGTCCTCGAGGTCGGAGAATCCGTCCATCACCACGGAGAACTCCGGTC
GCCGGGATGCCTCCAAGCCGACGAGACCCAGGGCAAGAACCCAAAAAAGTAGGCCGACTATACACAGAACGAAGACCATG
ACTAGCATATCCATGGCAGTCACCGTACCCGT-TGGCTGCTTATCCCGGCGCTCCATCAAAGGTTGTTCGTCGCTCCGGT
CGTAGTGTAGGAGTTTTGCGTCCATGGTGGT-----TCGATGTATTCACGCGCGCGGCTAAAGTGACAGTTAACTAAAGA
TGCTT-----TCGTTTCTCGTCCTCGAGTACATTATGGTATATTATATATAA-----CCCAGACAGCCCGGATCGATCAC
GTTCCCGTGTGGAGTTCATGTAGGATT-----------------------------------------------------
----------TGA-------------------------------------------------------------------
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>chr2B_1
ACGCCCTGGCATGGGGACGGCGGCGCCGCTGCCCCACGAGCCAGCGCCGCCATGCACGACACGAACGAGCGGTGCTTCGG
CGAGACGACGCGAACCTCTACCTGCACCGCGCCGCCAGCGCGCTTCTCCTCGGCCATGCGGTCGGCCAGCTCCCTCGGTA
GGCCCACCCCTCCGCTCGCGGCGACGATATGAAACTTCGTGGAGCACTTGGGCGGCACGCACAGATCCTGCACGCCGCAG
CCGGCGAGTGGTACTCCTCCGTATAAGACCACTGCCTCGCCGCCCACGCAGATCTCGGACTTGCCCCTAAAGTTGTTGAT
GACGATGGTGAGATTGAACGTCCGCGCGACGTGGTCCTCGAGGTCGGAGAATCCGTCCATGACCACAGAGAACTCCGGTC
GCTGGGATGCCTCCAAGCCGACGAGACCCAGAGCAAGAACCCAAAAAAGTAGGCCAACTATACACAGAACGAAGACCAGG
ATTAGCATATCCATGGCAGTCACCGTACCCGT-TGGCTGCTTATCCCGGCGCTCCATCGAAGGTTGTTCGTCGCTCCGGT
CGTAGTGTAGGAGTTTTGCGTCCATGGTGGT-----TGGATGTATTCACGCGCACGGCTGGAGTGAG--TTAATTAAGGA
TGC------CTTGTTTCCCGTCCTCAAGTACATTACGCTA---TATATATAA-----CCCAGAAAGCCCGGATCGATCAC
GTT-CCGTGTGGAGTTCATGTAGGATTGGAAGCGGTATGTCTTTTTAGGCTGGAAAAGGTTCGCGTTGGATTGGCAATCG
TTCTCAAAATTGACCGTAAGATGATTAAGTTGTGCATATCAATTTCGGAGAAGGTTATCAATCGATCGAGTT--------
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>chr2B_838
GTGCGCAG------------------------------------------------------------------------
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-----------------------------AGAGATCGATGGTACGACTTTTTTTATTTTTTA--TTTTTTGGTTTGCTGC
GGGGATTGTTACGAGTTTGATTGAGACAAAATACAAGGTCTCCAATTGTAACCCAACTCTTGCACGTACACGCACCTCCA
TAATTTTT--------TTTTTTTGTATATATACAAGGCGGTCGCTGGCTC-TGCAATATAAGTTGATCTGCTTGGGGG-A
CAGATCGGCCTCAACAATCAATCAAGCATGGAGAAAGAATTGACCCATGTTCACTGGGGAGAGGTTTTGTGGTTTAGCTG
GCTTTCCTTCCTGATTGGAGTCGGTACGGTTCCCCTCCTTCTCAAGATCG-------TTTTTGCATCTG---TAATCATC
AATCTGGTTCCAGGCTTCTGTATTTTTCGCTTTAT-ACAAGCTTTCAAATCAAACAGGTGCAGGCGTGCTCCTGCTCGCC
CTCATTAACGCGTTCAGGAGTTCTTACTGGGACGTCTACTCCCTCGAGCTCACCGGCATGGACGGCCGTGACCAGCCGGC
GGAGCTCAGCGGCCTGGCGTTCAACGTGACCCTGCACGTGGAGAACAGGCGGCCGAAGTGGGTGGGCAACAGCTTCAGCC
ATGGGAAGGTGGTGGTGTCCTACGCCGGCGTCGCGGTAGCGGAGGGCCGTGTGCCGGGCTTCAGCGTCAGAGCGAAGAGC
GCGGCGGAGGTGGATGCGGTGGCGCTAGGCGGCAAA---GCAGGCGTGGCGGACGCCGCCGTGAGGAGGCGCGTGGAGGC
CGAGTTGCGCTGGGACTCGGCGGAATTCGACGTCGAGGCCAAGCTGTTCCGCAGCGGCGTCGGCCAACAAGGCGGCCCCG
TCGTGCTGTGGTGCAAGGTTGCATCGCGGGTGCTGCATCAACCGTCACGGTGCAGGACCTTCACCGACTTCATGACTAGG
GCAGACGAGGAGTTTTGACTGATTTGTACTACGTGCGTGCAGCACGAATTCCCAGCCTATGCGTCTA------TTATT--
----TTCCTATTCTT-------AAAAGTATATTTTTGTTCCCC--AAGTTTCTCAAAGTATAGACTT--TTTCTTAA-GA
TTTTTAGG-TATATATTTGGTCC-TTCAAGTCTCAAAACGGGATAAGTTTGGTTCAAAACCAGATTTTG--AGCACGTTG
ACCTAG-----------TTTGACCT-----------GGTTTGACCATGTTGACCAAGTTTGACCAATGAATAGTAAATTC
GAAA--AATAG--CAAACA-----AATT--CAA-AAA----AACTGAAATTTTGTGACAT-CAACATGCTTGGGTGCGTT
TGGTGCGTGTAAATTGTTGTGGCC-AAATAACATCTGAGGAGCTCTAGATTT----------T-----------TTTT-C
TTTTTTGTGG---GCC-AAAATTAGTTTT-TTTTTTTTGCCAAGAGCTCCTCAGATGTCGAAACA-CCACATAAATTTTC
-A---------CGCA-CCCAAGCATCTTGGTTGCCACAAAATTTCGGAGTTTTT---------GTTGAAC------TTTT
TTGCTATTTTTTGAATTTACTGTTCATCAGTCAAACA---------------TGGTCAAA--------------------
CCAGGCCAACGTGCTTAAAATCTGGTTTTGGACCAAACTTATCCGGTTTTGAGACTTGAA-GGACCAAATACCAA--AAA
AAAAATTAAGGGACCAAGTCTATACTTTTAGGAAACTTGAGGGACCAAAAACATACTTTT-CTCTTTTTCTTTAGGGCAG
TGCTATGCGTCGGCCGAAGGATCTTTTAAAAAGACCCGCTGCCTCGTGAGCCGTCCGATTGTAAGAGGCGAGCCGTCCAT
TCTTGTTCTGTAATTTCTTGCAGCAATGTTCCTGTTGTGAAACCTCTTCTCGTGTAACTTTCTGCAACAAGAGCCATGTG
ACAAAAATCTCTTCTTCTCCAATTTTTTGCAACAAGACCTCTATTGCAAAATATTCTCTTCTTTAATTTACTGCATCAAG
ACACCTATTGCGAAACTTTTTCTCTCTATTTTTCTGCAACAAGACCCTTGATGTAAAACTTCTTCTTTATTTTTCTGTAA
CAAGACTCCTATTGCAAAAACTCCACTACAATAGGACCCAACATCTCTAGCTTCTTCTATGTATTCCTGCAACAAGACAG
TTGTTCCGAAAACTTGCAAGAACGTCGACGGCTAAACGGAGAGAGCACCCCGCGGTCTCTGCATCACCCTATTTGTTGCG
GTATGCCTTTTCGAAACAGGTGCTCAGTTGTAAGAACCGCAGAACAGAGCGCTCTGTGTGTTTAGATGAGATTCAACACA
TGGATAGGAGAGATAAAAAATGCGTCCATTTCATTAGAGATAGGGATGAAGGAGAGAAGTGGTGCGCTGGCCCATCACGA
TGTGTTTCAAGCGTAGAACATGATGGATGTGAGAGGAAAGATCAGTCTGTTGACCGCTAGCTTTTTCCTTTTCTTTAAGG
GAATATGGGGTGCTTTATTCGGCCAAAACAACTCCAAAATCTGCTACGAGGCTTGTTACAAGAAAACTACTCTCTCCGTC
CCATGACATATGATG------------------TTTTCTGACAATACACTAGCGTAAAAAACA-TCTTACATTAGTCAAA
AAATGTCTAAAATTAACGTCTTACTATATGACAGATGGGGCCCAGCAGACAGGCTGATGTGGCACCGCTTAACATCTCAG
ATTTAACGACGATGTTTGGTAATGTGTGGCCCTTTGGGGTTCCACCAGTCATTGGAAGA-AAAAAAGAAAAAAAAA--TG
GTTTCAGCCTGACTGGCAGGCCCACATAAAC------ACACTTAACCGTGCTGAAGCCGCCGATCAATATTATTTGC-AA
AAAGATTACAGTAGACATAGTGTTTTCTACCCAAAAGAAAAATGTAGACTCGTGTTTTCTACTAATCTAGCCTTCAACGT
GGTGGTTTTGTGCAATTTACTCCCACACCGAACAAGTGGCCCAAAAAGAGATGGGAAGG
>chr2A_881
TTTTTTT-------------------------------------------------------------------------
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------------------------------------------------------------------------TTTGCTGC
GGG-ATTGTTACGAGTTTGATTGAGACAAAATATGAGGTCTCCAATTGTAACCCAACTCTTGCACGTACACGCACCTCCA
TAATA-TT--------TTTTTTTGTATATATACAAGGCGGTCGCTGGCTCCTGCAATATAAGTTGATCTGCTTGGGGGGA
CAGATCGGCCTCAACAATCAATCAAGCATGGAGAAAGAATTGACCCATGTTCACTGGGGAGAGGTTTTCTGGTTTAGCTG
GTTTTCCTTCGTGATTGGAGTTGGTACGGTTCCCCCCCTTCTCCTTCGCAGCATCTTTTTTGCATCTGTAAATAATCATC
AATATGGTTCCAGGTTTCTGTGTTTTTCGCTTTA---CAAGCTTTGAAATCGAACAGGTGCAGGCGTGCTCCTGCTCGCC
CTCATCAACGCGTTCAGGAGTTCTTACTGGGACGTCTACTCCCTCGAGCTCACCAGCATCGACGGCCGCGGCCAGCCGGC
GGGGCTCAGCGCCCTGGCGTTCAACGTGACCCTGCACGTGGAGAACAGGCGGCCGAAGTGGGTGGACAACAGCTTCAGCG
ATGGGAAGGTGGTGGTGTCCTACGCGGGCGTCGCTGTAGCGGAGGGCCGTGTGCCGGGCTTCAGGGTCGGAGCGAAGAGC
GCGGCGGAGGTGGAGGCGGTGGCGCTGGGCGGCAAAGCTGCAGGCGTGGCGGACGCCG---TGAGGAGGCGCGTGGAGGC
GGAGCTGCGCTGGGACTCCGCGGAGTTCGAGGTGGAGGCCAAGCTGTTCCGCAGCGGCGTCGGACAGCAAGGTGGCCCCG
TCGTGCTGTGGCGCAAGGTTGCATCGCGGGTGCTGCATCAGCCGTCACGGTGCAGGGCCTTCACCGACTTCATGACTAGG
GCTGACGAGGAGTTTTGACTTGTCTG---TACGTGCGTGCAGCACGAATTCACAGCTTATGCGTCTGGGCTGTTTTTT--
----TTCATATTTTTCTTTGAGAAAAGTATGTTCTTGTCCCTC--AAGTTTCTAAAAGTATAAACTTGGTTCCTTAA-GA
TTTTTAGG-TATATATTTAGTCC-TTCAAGTGTCAAAACCGGATAAGTTTAACTCAAAACCAGAGTTTG--GTCAC----
-----------------------------TTACCAGGGTTTGACCACATTGACCAGGTTTGA-TCATGAATAGTAAATCT
AAAA--AAAAG--CAAAAA-----AAT----AA-AAA----ATCTGAAATTTTGTGACAG----CATGCTTGGGCGCGCT
TGGTGCGTGTAAATTGTTGGGGTC-AAATAACATCCGAGGAACTCTAGCAAAAAAA------AAAGACAAAATTTACCTT
TTTTTTT--A---GCT-AAAATTAG-TTT-TTGTTTTTGCCACGAGCTCCTCGGATGTTGAAACA-CCACACAAATTTTC
-A---------TGCA-CCCAAGCATCTTGGTTGCCACAAAATTTTGGAGTTTTT---------TTTTTAAA---------
----------TTGAATTTACGGTTCATCA-------------------------ATCAAA--------------------
CCCGGCCAATGTGCTTAAAATCTGGTTTTGGACCAAACTTATCCGGTTTTGAGACTTGAA-GGACCAAATGTATATCAAA
AAATCTTCAGGAACCAAGTCTATACTTTTGGAAAACTTGGGGGGTCAAAAACATACTTTT-CTCTTTTTCTTTAGGG---
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GTACATGGGGTGCTTTATTTAGATAAAACAGCTCCAACATCTGCTACGAGGCTTGTTACAAGAAAACTACTCTCTTTGTC
CCATAACATAAGACATTTTTCGACAATAAGACATTTTTTGACAATACACTAGAGTCAAAAGCA-TCTTACATTAGTCAAA
AAACATCTAAAATTAACGTCTTACTATATGACAGATGGGGCCCGCC--GCAGGTTGATGTGGCACCACTTAACGTCTCAG
ATTTAACGGCGACGTTTGGTAATGTGTGGCCCTACT-GGGTCCACCTGTCATTGGAAGG-AGAAAAGGAAAAAAAAATTG
GTTTCAGCCTGACTGGCAGGCCCCATCTATAATAAATACGCTTAACCGAGCTAAAGGTCCCGGTCAATGTTATTTGC-AA
AAATATTACCGTAGACATAATGTTTTCTGCCCAAAAGAAAA-TGTAAACTTGTGTTTTCTAGTAATCTAGCCTTCAATGT
GATGGTTTTGTACAATTTACTCCCACATCAAACAAGTGGCCCAAAAAGCGGTGGAAAGG
>chr2B_1850
TTTTTT--------------------------------------------------------------------------
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----------------TTAGAGAAAAGTATGTTTTTGGCCCCTCAAGTTCCTCAAAAGTATTGACTTGGTCCCTCAA-GA
TTTTTTGG-TATACATTTGGTCC-TTCAAGTCTCAAAACCGGATAGGCTTGCTCCAAAACCAGATTTTA--AGCACGTTG
ACCGGG-----------TTTGACC------------------------------ATGTTTGACCGATGAACACTAAATTA
AAAA--AATAG--CAAAAATAATCA------AA-AAA----GTCTGAAATTTTGTGGCAACCAAGATGCTTGGGTACGCT
AGGT-CGTGAAAATTTGTGTGGTG-TTTCGACATTCGAGGAGCTCGTGGCCAAAAA------GAA--CAAATTTGGGCTC
ACAAAAAA-A---GCC-AAAAC-----TT-GTTTTCTTTCCTAGAGTTCCTCGGATGTTATTTGA-CCACAAAAAAATTA
TACGCACCTAGCGCACCCCAAGCATGTAGGTTGTCACGAATTTCAGATTTTTTT---------TGAATTTA------TTG
CTACTTTTTTTCCAATTTACTGTTAATTGGTCAAACCAGGTCAAA-----CGTGGTCAAA--------------------
CCTGGTCAAATTGCTCAAAATCTGGTTTTGGACCAAACTTATCCGGTTTTGAGACTTGAAAGGACCAAATGTATACCAAA
AAATCTTGAGGGACCAAGTCTATACTTTTGAGGAACTTGAGGGACCAAAAACATATCTTTCCTCTTTTT-----------
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>chr3A_1859
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--------------------AGAAAATTATGTTTTTGGTCCCTCAAATTCCCCAAACGTATAGACTTGGGCCCTCAA-GA
TTTTTTGG-TATATATTTGGTCC-TTCAAGTCTCAAAACCTGATAAGTTTGATTCAAAACCAGATTTTTTTAGCATGTTG
ACCGGG-----------GTT-----------------------------TGACTCGGTTTGAACAGTAAATT-----CA-
AAGA--AATAG--CAAACA-----AATT--CAA-AAAGTATATGTGAACTTTTGTGACAACCAACATACTTGGGTATGCT
TGGTGCGTGTAAATTTTTGTGTTC-AAATAACATCCGAGGAGCTTTAGCCAAAAAA------AAA--CAAATTTTGGCTT
TTTTTGGTGA---GCC-AA------------TTTTTTTTTCACGAGCTCCTCGGATGTCAAAACA-CCACAAAAAATTTC
-A---------CGCA-CCCAAGCATCTTGGTTGCCACAAAATTTTAGAGTTTTT---------TTT-AAT------TTCT
TTGCTATCTTTTGAATTTACTGTTCATAA-------------------------GTCAAA--------------------
CCTGGTCAACATGCTTAAAATCTGGTTTTTGAACAAACTTATCCGGTTTTGAGACTTCAA-AGACCAAATGTATACCAAA
AAAATTTGAGGCACCAAATCTATACTTTTGGAGAACTTGAGGGACCAAAAACATACTTTT-CTCATT-------------
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>chr5B_1859
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--------------------AGAAAAGTATGTTTTTGGTCCTTCAAGTTCCCTAAAAGTATAGACTTGGTCCCTCAAGAT
TTTTTTGG-TATACATTTGGTCC-TTCAAGTCTCAAAAACGGATAAGTTTGGTTAAAAACCAGATTTTG--AGCATGTTG
ACCAGG-----------TTTGATCG------------------------------A---TGAACAGTAAATT-----TA-
AAAA--AAT----CAAAAA-----TATC--AAA-AAA----TA----------TTGACAACCAACATGCTTGGGTGCGCT
AGGTGTGTGTAATTTTTTGTGGTC-AAATAACATCCGAGGATTTCTAGCAAAAAGC------AAAAGCAAAATTTGGCTT
GTTTTTGTGA---GCC-AAAAT-----TTGTTTTTTTTGCCGCGATCTCCTCGAATGTCGAAACA-CCACACAAATTTTC
-ACGCACCTTGCGCA-TCCAAGCAACTTGGTTGCCACAAAATTTCATTTTTTTG-AAT-----------T------TATT
TGCTATTTTTCTGAATTTACTGTTCATCTATCAAACC---------------TGGTCAAA--------------------
CCCAGTCAATGTGCTTAAAATTTGGTTTTGG---------ATCCAGTTTTGAGAATTGAA-AGACCAAATGTATACCAAA
AAAATTTGAGGGACAAAATTTATACTTTTGGGGAACTTGAGGGGCCAAAAACATACTTTT-CTCT---------------
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>chr7B_1859
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--------------------AGAAAAGTATGTTTTTA-TCCCTCAAGTTCCTCAAAAGTATAGACTTAGTCTCTAAA-AA
AATC--GG-TATATATTTGGTCC-TT-------TAAAATCGGATAAGTTTAGTCGAAAACCAGATTTTG--AACACGTTG
ACCGGGGTTTGATCGGATTTGACC------------------------------ATGTTTGACTGATGAACCGTATATTC
AAAA--AATAG--TAAACA-----A------AA-AAA----AACTGAAATTTTGTGACAACCAACATGCTTGGGTGCGGT
CGGTGCTTGTAACCTTTTTTGGTC-AAATAACATCCGTGGAGCTTTAGCAAAAAAA------T-----------TTGG-C
TTTTTTGTGT---GCC-AA-------------TTTTTTTTCACAAGCTCCTCGGATGTCGAAATA-CCACAAA--TTTTC
-A---------CTCA-CCCAAGCATCTTGGTTGCCACAAAATTTTAGAGTTTTT---------TT--------------G
CTGCTATTTTTTCGAATTACTGTTCATTGGTCAAACA---------------TGATCAAA--------------------
CCCGGTCAACATGCATAAAATTAGGTTTTGGACCATACTTATCCGGTTTTAAGACTTGAA-GGACCAAATGTATGCCAAA
AATTCTTGAGGGACCAAGTCTATACTTTTGAGGAACTTGAGGGACAAAAA-CATACTTTT-CTCT---------------
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>chr3A_1860
GAAAAT--------------------------------------------------------------------------
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--------------------------GTATGTTTTTGGTCACTCAAGTTCCTCAAAAGTATAAACTTGGTCCCTCAAGAT
TTTTT--G-TAGACATTTGGTCC-TTCAAGTCTTAAAACCGGATAGGTTTGGTCCAAAACCAGATTTTG--AGCATGTTG
ACCAGG-----------TTTGACC------------------------------AA---TGAATAGTAAATT-----TT-
AAAA--AATAG--CAAACA-----AATT--GAA-AAA----AAC-GAATTTTTTTGACAACCAAGATGCTTGGGTGCGCT
AGGTGCATGTAAACTTTTGTGGTC-AAATAACATCCGAGGAGCTCTCGCAAAAAAA------A--------------G-T
TTTTTTGTGA---GCC-AAAAT-----TT-GTAGTTTTTTCACGAGCTCCTCGCATGTCGAAACA-CCACACAAATTTTC
-ACGCACCTAGCACA-CCCAAGCATCTTGGTTACCACAAAATTTCATATTTTCT---------TG---------------
----ATTTTTTTTGAATTATTGTTCATCAGTCAAACCCGGTCAAG------GTGGTCAAA--------------------
TCCGGTCCACATGGTCAAAATCTGGTTTTGGACCAAACTTATCCGGTTTTGAGACTTGAA-GGACCAAATGTTTACCAAA
AGAT----------------------------------------------------------------------------
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>chr1D_1860
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---------------------GAAAAGTATGTTTTGGTCCCTT--AATTTTCCAAATGTATAGACTTGGTCCCTCAA-TA
TTTTTTTAATAGACATTTGGTCC-CTTAAGTCTCAAAACTGGATGACTTTGGCCCAAAACCAGATTTTG--AGCACATTG
ACCGCC-----------TTT-----------------------------TAATT-GGTTTGACTAATGAATAGTAAATTC
AAAG--AAATTAACAAACA-----AATT--GAAGAAA----ATTTGAAATTTTGTGGCAACCAAGATGCTTGGTTGCGCT
AGCTGCATGTAAA-TTTTGTGGTT-AAATACCATGTGAGGAGCTCTAGCAAAAAAACCAAATT-----------TAGG-T
TTTTTTTTGTTAGGCA-AAACT-----TGTTTTTTTTTGTCGTGACGTCCACGAATGTTGAAACA-CCACACAAATTTTC
-ATGCACCTAGAGTT-CCCAAGCATCTTGGTTGCCACAAAATTTTAGATTTTTCTAAT-----------C------TTTT
TGCATTTGTTTTGGATTTATTGTTCATCGGCCAAATT-------------------------------------------
--CGGTCAACCTGGTCAAAATCATGTTTTGGACGAAACTTATTCGGTTTTGAGACTTGAA-GGACCAAGTGTCTACTAAA
AAATCTTGAGGGGCCATGGTTATAATTTTGGGGAATTTCAGGAACCAAAAACATATTTTT-CTCTTTT------------
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>chr3A_1862
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-----------------------AAAGTATGTTTTTTGTCCCTCAAGTTTTCCAAAAGTATAGACTTGGTCCCTTAA-AT
TTTTTTGG-TATATATTTGATCC-TTCAAGTCTCAAAACCAGATAAGTTTAGTCCAAAAACAGATTTTG--AGCATGTTG
ACCGGG-----------TTTGACC------------------------------AGGTTTGACCGATGAACAGTAAATT-
AAAA--AATAG--CAAACA-----AATT--CAA-AAA----ATCTCAAATTTTGTGACAACCAATACGCTTGGGTGTATT
TGGTGCATATAAATTTTTGTGGTC-AAATAACATCCGAGGAGAGCTC------AAA------ATA--CAAATTTTGGCTT
ATTTTTACAA---GTC-AAAAT-----TAGTTTTTTTTGCCACGAGCTCCTCGGATGTCGAAATA-CCACACAAAATTTC
-A---------CACA-CCCAAGCATCTTGGTCGCCACCAAATTTCAGAGTTTTTTGAT----------AT------TTTT
TTGCTATTGTTTGAATTTACTGTTCATCAGTCAAAC--------------------------------------------
-CCGGTCAACATGCTTAAAATCTAGTTTTGGATCAAACTTATCAGGTTTTGAGATTTGAA-GGGCCAAATGTATACAAAA
AATCGG-AAGGGATCAAGTCTATACTTTTGGAGAAATTGAGGGATCAAAAACATTATTTT-CTCATTTTTTTTT------
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>chr4A_1863
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------------------------AAGTATGTTTTTGGTCCCTCAAGTTCCCCAAAAGTATAGACTTGGTCCCTCAA-GA
TTTTTTTG-TATACATTTGGTCC-TTCAAGTCTCAGAACCGGATAAGTTTGGTCCAAAACTACATTTTA--AGCACATTG
ACCGGG-----------TTTGCTCACGTTTGACCAGGTCTGACCATGATTGATTAGGTTTGACTGATGAATAGTAAATTC
AAAA--ATAG-------------CA------AA-AAA----AACTGAAATTTTGTGGCAACCAAGATGCTTGGGTGCGTT
AGGTGTGTAAAAATTTTGTGTGACGTTTCGACATTCGAGGAGCTTGTGGCAAAAAA------AAA--CTAAATTTTGG-C
TCAAAAAA-A---GCCAAAATTTATTATT-TAATTTTTTGCTAGAGCTCCTCACGTGTTATTTGACC-ACAAAAAATTAC
-ACGCACCTAGCGCA-CCCAAGCATGTCGGTTGTCACAAAATTTCAGAATTTTT---------TTTAAAT------TTGT
TTGC-TATTTTTTTAATTATTGTTCATCAGTCAAACC---------------TAGTTAACGTGGTCAAACCTTGTCAAAC
CCCGGTCAACGTGCTGAAAATCTGGTTTTGGACCAAACTTATCCGGATTTGACTCTTGAA-GGAACAAATGTATACCAAA
AAATCTTGAGGGACCAAATCTACACTTTTGGGGAAATTGAGGGACCAAAAAC----------------------------
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>chr5D_1942
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----------------------------AGTGTCAAAACCGGATAAGTTTGGTCCAAAACCAGATTGTA--AGCACATTG
ACCGAA--------------------------------TTTGACCAAATTGACCAGGTTTGACCGGTGAACAGTAATTC-
AAAGTGAATAG--CAAACA-----AATT--AAA-AAA----ATCTGAAATTTTGTGAGAACCAAGATGCTTGGGTGTGCT
AGGTGTGTGTAAGTTTCTGTGGTC-AAATAACATCCGAGGAGCTCTAGAAAAGAAA------T------AACTTTTGG-C
TTTTCTTTCTATGAACCAAATTTTGTTTT-TTGTTTTTGCCACGAGCTCCTCGAATGTCGAAACA-C-ACACAATTTTTC
-ACGCACCTAGCACA-CCCAAGCATCTTGGTTGCCATAGAATTTTAGATTTTTTTGAATTTGTTT--------------G
CTATTTTTTTTTAAATTTACTGTTCATCTGTCAAACC---------------TGGTCAACGTGGTCAAACC---------
--CTCTCAACGTGCACAAAATCTGGTTTTGGACCAAACTTATCGGGTTTTGAGACTTGAA-GGACCAAATGTCTACCCAA
AAATCTTGAGGGACCAAGTCTATACTTTTGGGAACTTGAGGAACTAAAAA-CATACTTTT-CTCTT--------------
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-----------------------------------------------------------
>SNPs
-------------------------------------------S----------------S-------S-----------
----------------------------------------S-------S--S--------S-------------S-----
-S-----------------------------S--------------------------------------------S---
-----------S---------------------------------------S---------------S------------
-----S------------------------------------------S------------------------------S
-------------------------------------S-----------S------------------------------
--------------------------------S---------S-S----------------------------------S
---SS--S--S--------S---------SSSSSSS--------------------------------------------
-SSSSSSSS---------S-------S----------------SSSSS-SSSSSSSS-----------------------
------S-------------------------------------------------------------------------
----------------------------------------S-------------S-----------S-----SSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSS---------------S-S-------S-----SSSS----------------
--------------------------------------------------------------------------------
-------SSSSSSSSS--------S--------------------------------------S----------------
-------------------------S--------------S----------S---------S------------------
-------------------------------------------------------S------------------------
-----------------S-----------------S--------------------------------------------
-----------------------S--------------------------------------------------------
--------------------------------------S-------------S---------------------------
-------------------------------------------------S--------------------S---------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------S--S------------------------------------------------
------S------------S------------------------------------S---------------------SS
SSSS------S-------SS-------------------S---S---------------------------S--------
--------------------S-SS------------------------------S-------------------------
----------------------------------------------------S---------S-----------------
-------------------------S--SS--------------------------------------------------
--------------S-----------------------S--------S--------------------------------
S--------------------------------------------S----------------------------------
-------------------S-----------------------------------------------S--SSSSSS----
----------------S----S---------------S------SSSSSS------------------------------
------------------S---------------------S---------------------------------------
-------------------------------------S-----------------------S------------------
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----------------------------S-------S---------S---------------------------------
-----------------------------------------S-------------------SSS----------------
---------------------------------------------------------S-------S--------------
----------S------------------------------------------------S--------S------S----
----S----S----S--S-----------------------------------------------------------S--
--------------------------S----S----------------------------S-----------------S-
---------------------S-------------------S-----------------
>forward_592
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------------GTTTTGCCTCCATGGTGCAG------------------------------------------------
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>reverse_2526
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---------------------------------------------ATGGTCGTGGTCAAACCCTC---------------
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