>input_sequence_62853
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----------------------------------GCCCGCTCACAAACACA-TATCCACCTCGAACCACGCCGGTGGCCA
CAC--ACA--CACACTTGCGCCGGAGCTCAGCTCAAGTGAACGTTCCAATGGCGGCCGCGCCGACGGGGGTCGCGTGCCC
GGTCTACCCGTGGCCGAGCGACGCGTAAGCACGCCACACCAGCAGCCAACGCTCACTCAACTCTTCTTCTAAGCATCTCG
TAGGGGTTGATGGTT--GCTGGTTGTGATGGGCTCGCAGGGCGCAGCGCGGGGCCAAGGTGTTCATGCAGAGCGACTGCG
CGGCGTGCCACTCCGCGCTCCCCTACGCCGGCCTCCGCGGCGCGGCGGTGCCGGGCCAGGACGCGGTAGCCAGGACGGCA
GAGATCCTCGTTGCCGCCGCGGCCACGGAGGAGGCGCTGCCGGCGACGGGGATGACGCCGACCCAGTAC-----------
-------ACGCCGGACCTCGCCACCGTCGCCACAAGAGTAAGCACAAGATACATACGTACATGATGATGCACACAGCTAG
TTCGTCAAAAGATACACACAGGACACAGCTATGTGTTTGACACTGTTTTTCTTCTTCTGGAAAAGATCCAGGGCGGGGTC
AAAAGATACGCACAGGCACAGCTATGTGTTTGACACTGTTTTTCTTCTTCTTTCGAAGATCCAGGGCGGGCTGCGGTGCA
ACCTCTACTCCACTGGGACGGCGACGGCGCCGGCGCCCGTTAGGGCGATGCTCGCCGGCGGCGCCGCGGCGTGCCAGGAG
CTGAAGAAGAGCCCCGTGTGGCTGCAGTTTGCCCAGGCCTTCCAGGCAGTTTGATGGG----------------------
-----GCTATGCCAAAGCTTGCCTCATTTCTGT--CCAAGATGTATGTCTGTAACATATGTATAAATCACATCACATTGC
ACCTTGTGCCGGATCAAGCAGTATC-AAATAAAGCACTCCTGTGCAGCCGTTCCATGTCAAATGT-ACACATGCATTCCA
GACAGGC----CGTGAGCTCATGTTGTCTTGTGTTGCTCATAGGCCATAGCAGCCTATATATAT---TGTGACAGTAATG
CC------------------------------------------------------------------------------
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--
>chr6D_1_TraesCS6D01G370200
TCTCGTGTTGCTTCCCCGCCCAAGCAAACGCCCCATCAACCGTGTTGGTGGTTGATTGTACTACGAGTGAAGCTCTCCGC
ATTTGCTCTCCGGCTAGGCCTGTGCTCCCCTCATCGTCTTCATCTGCATCGCACTCTCCAGGATTTGAGGCCTCTCCCGT
GATGAGCTCCGCTACACAGACTCCGCCCTTCATCACCGACGCTTGCCGCACACCATGCAACCCGGACTATTGCCCTGCCG
CTGAGACGGTCACGGTGTCTGCCACACCGCCCCAGGCTCCTACTCCTGCACCTTCCAGCATGGACGTGTTGTTGCCGATT
CTAGAGCCTCAATTCCAGAGGCAGCAAGCACA-TCTATGCCTTTTTCGGAGGAGGCGGTTGTGAAAGCTGCTAGAGTATT
CTCTAGCAGGTGTCACTGGCCAGATAGC------------------------------TACGGGAGCACCTCACATTAGG
TGCTCCCGCGTGACCTCGGCCGTCGATCTGAGATCGAATGGACAGCATCATGTGATGTGAACGAAAGTGTCATTTCGGGA
ATGTTTGGAGGGTTTTCCATAAAACATTCATACAAGACTTGTCTTTTTTGTTTCTCAATGCGTATTTTGAATTTTGATTT
GAAAATTTTAGGGATTGTACATTCATGTGATGTGATGCTAGCGTCCACATTTTTTCGATGTTTTTTTGAAACATTTAAAT
GTGCATTTTCAAAATTGGGAGCACCTAATGTGAGGTGCTCTGGTAGCACCAGATATTCACCCCCGGCCTATGGG------
--------------------------------------------------------------------------------
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----------------------------------------------------CGTGTAAATCAATGACGACGGCGTTAAT
TTCTTCCACCAAA--------------GATAGAGCGTTTGGAAA------------------------------------
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-----CCCGCCTTGCCAAGAGGGAAACGGGCTCCATTCCCCGGGCAGAAAGGCACCTTCTTCAGTGTGCTTCCACGTCAT
CCCAATCCACAGCCCGACGTGCTCCGCCACACTCCCACCGTCGGTGACCCACGACCCACTCACCACACCACACTTATCTG
CAG--------AGAGTGAGC--CGCAGCAGCAGCGCCCGCTCACAAACACA-TATCCACCTCGAACCACGCCGGTGGCCA
CAC--ACA--CACACTTGCGCCGGAGCTCAGCTCAAGTGAACGTTCCAATGGCGGCCGCGCCGACGGGGGTCGCGTGCCC
GGTCTACCCGTGGCCGAGCGACGCGTAAGCACGCCACACCAGCAGCCAACGCTCACTCAACTCTTCTTCTAAGCATCTCG
TAGGGGTTGATGGTT--GCTGGTTGTGATGGGCTCGCAGGGCGCAGCGCGGGGCCAAGGTGTTCATGCAGAGCGACTGCG
CGGCGTGCCACTCCGCGCTCCCCTACGCCGGCCTCCGCGGCGCGGCGGTGCCGGGCCAGGACGCGGTAGCCAGGACGGCA
GAGATCCTCGTTGCCGCCGCGGCCACGGAGGAGGCGCTGCCGGCGACGGGGATGACGCCGACCCAGTAC-----------
-------ACGCCGGACCTCGCCACCGTCGCCACAAGAGTAAGCACAAGATACATACGTACATGATGATGCACACAGCTAG
TTCGTCAAAAGATACACACAGGACACAGCTATGTGTTTGACACTGTTTTTCTTCTTCTGGAAAAGATCCAGGGCGGGGTC
AAAAGATACGCACAGGCACAGCTATGTGTTTGACACTGTTTTTCTTCTTCTTTCGAAGATCCAGGGCGGGCTGCGGTGCA
ACCTCTACTCCACTGGGACGGCGACGGCGCCGGCGCCCGTTAGGGCGATGCTCGCCGGCGGCGCCGCGGCGTGCCAGGAG
CTGAAGAAGAGCCCCGTGTGGCTGCAGTTTGCCCAGGCCTTCCAGGCAGTTTGATGGG----------------------
-----GCTATGCCAAAGCTTGCCTCATTTCTGT--CCAAGATGTATGTCTGTAACATATGTATAAATCACATCACATTGC
ACCTTGTGCCGGATCAAGCAGTATC-AAATAAAGCACTCCTGTGCAGCCGTTCCATGTCAAATGT-ACACATGCATTCCA
GACAGGC----CGTGAGCTCATGTTGTCTTGTGTTGCTCATAGGCCATAGCAGCCTATATATAT---TGTGACAGTAATG
CCAATATTATCCATTGCCGGTTTTACA--------------AGGAGATGCAGAGAGGTAAAT---ACAAAGCCTCCTAAC
CAGTGAGCACCATCAAATCAAAGAG--AAAACAGGCCAACCATGTATGTCGGCGCCACCATCGATGAAACACACATAAAC
TACACTGTGATCATAGTTTTGTTATGAAGAAAGAAACGTTCTGCGTACCAAATCAAAAATCTGTGTAGCAAAGTCAGCCC
ACAATAATTACAGTGCCTGAAAAAGATCACCCGAGACAAAAATTAGATTAGGCTATGATCCTCACTTTCTGAGCTACTCT
TGTCTCCGGTCTAATCAGCTCCTTTTGTTTGCGATTCTGAGTAAATGATCT---GCGTTCATTCCTTTTCTGGATGGCTC
CCTTCGGCCGAATCAGTGTCTGCTGTTTGTTCTCTGTATGCTTCCTTGTGATCCACAGACTGCGTGTTCGAATGCTGGAA
CCTCGGTAGCGCGCCGAGCTGTTTTAGGCTCTCGCCCTGCCTCGCGATCACCATCTCCAGGTACTTGCTGTGTTCTTCTA
CTTGCAGCTGCATCTTTCTTTGGAGCTGTGGAGAGGGA--AAAAAT----AGAAGAGAACCCAAGTTACTAAAATAGATG
AA-AGTCTGCACGCCTTCTCTTGCCAGTTCCAAGGAG----AATATGCATACCTCAAGCTGTGCATGAAGTTGCTTCTGC
AAGCCAATCTGAGTTCTTAGCCCTTCACTAGCCTCCATGTGTCTGCACCAAGTGTAAAGTGAATAATTAGAACTCTGGAA
CTCGCACACACACACACACACACACACACACACACACACACACACACACACTTCACTGTGGACAGGGCATTGCGCCATTT
CATGGATGGAG------TACATCTGAAGCAAAAACAGGTTACTG-TGGCATACATATCTTCCAGGTTGGGGCACAGGTAG
TACATATATACTCCCTCTGTAAACTAATATAAGAGCGTTTAGATCACTACTTTAGTATTCTAAACGCTCTTATATTAGTT
TA
>chr6A_1
TCTCGTGATGCTTCCCCGCCCAAGCAAACACCCCGTCGACCGTGTTGGTGGTTGATTCTACTACGAGTGAAGCTCTCCGA
-------------CTAGGCATGTGCTCCCCTCACCGTCTTCATCTACATCACGCCCTTTAGGATTTGAGGCCTCTCCCGT
GATGAGCTCCGCTACACAGACTCCGCCCTTCATCACCGACGCTTGTCGCACACCATGCAGCGCTAACTATTGCCCTGCCG
CTGAGACGGTCACGGTGTCTGCCACACCGCCCCAGGCTCCTACTCCTGCACCTTCCAGCGTGGACGTGCTGCTGCCGATT
CTAGAGCCTCTATTCCAGAGGCAGCAGGTAGCCTCTATGCCTTTTTCAAAGGAGGCGGCTGTGAAAGATGCTAGAGTATT
CTCTAGCAGGTGTCACTGGCCAGATAGCATGGACCGGACAGGGGAGAATATCTGGTGCTACGGGAGCACCTCACATTAGG
TGCTCCCGCGTGACCTTGGCCGTCGATTTGAGATCGAAAGGACAACATCACGTGATGTGAACCAAAGTGT----------
---------------------------------------------------------------ATTTCGAATTTTGATTT
GAAATTTTTAGGAATTGTACATTC-----ATGTGATGCTAACATCCACATTTTTTTCGAATTTTTGTGAAACATTTAAAT
GTGCATTTTCAAAATTGGGAGCACCTAACGTGAGGTACTCCCGTAGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCGTGTACATCAATGACGGCAGCGTTAAT
TTCTTCCACCAAAGACAGAGAAGCCATGATATAGCGTTTGGTAAGAGCATCTCCAGCCGTTCGCCCCCCAGGACGCATAA
AAATCGCCCCTGGGGGCGAGCCGGCGATACAATCGACGCTAGGGGCGGTTTCGCGCCCAGTCGTCGCCCCCAGCTCGCCC
CCAGGCGCCGAAATTGGCCCACTTTTCAGCCCCATTTCGGCGAATAAAGGGCCCATATGGGCGACAATAGGCCCATATTC
GGCGTGGTTCGCCGTTGTTCGGCGTTCAATTATGCACATAAATTTTTTTATCACATATTTCATCACAGAAATATCAAATA
CTTCAACAAAATAGTACAATAACAAATAGTTCAATACAAATTATATAGTTCAACAAATAAAAACTCATATTTTATCACAC
ATCGCGCCCGGCGTCGCCCTTAAGTCTCCATAGATGCTCTATCAGATCTTGCTGCGGTTGATGATGCACCTGTGGGTCTC
GGATCTCCTGACGCATACTGAGATAGGCAGTCCAGGTTGCCGGTAGCTGGTGATCAACTTCGGCTAGAGGACCCTGCCTA
TAGTATGGTTCAGTGTCAAACACTGGGTCTTCTTGCTCGCTCTTGATGATCATGTTGTGCAAGATGACACAGCAAGTCAT
AATCTCCCACATCTGATCTTTCGACCAGGTCTGAGCGGGGTACCGGACAACAAGAAATCGAGATTGGAGCACACCAAATG
CCCGCTCGACATCCTTCCTGCAAGCCTCCTGAACCTTCGCAAACCAGACGTTCTTGCCTCCTGGCACAGGGTTTGAGATC
GTCTTCACAAATGTCGACCATCTTGGATAGATGCCATCAGCTAGATAGTACCCCTTGTTGTAGTGCCGCCCATTGATCTC
GAAGTTCACCGGAGGAGAATGACCTTCAACAAGCTTGGCAAAGACAGGAGAGCACTGCAACACGTTGATGTCATTGTGAG
TTCCTGGCATACCAAAGAAGGAGTGCCAAATCCAGAGGTCCTGTGTGGCCACCGCCTCAAGTACCACACTGCAACCGCCT
TTGGCGCCTTTGTACATCCCCTGCCAAGCAAATGGGTAATTCTTCTATTTCCAATGCATGCAGTCGATGCTTCCAAGCAT
CCCGGGAAATCCTCTTGCTGCATTCTGTGCTAGGATCCGAGCAGTGTCTTCCGCATTGGGTGTTCTCAAGTATTGAGGTC
CAAACACTGTCACCACTGCCCGACAGAACTTGTAGAAACACTCTATGCTGGTGGACTCGGCCATGCGCCCATAGTCGTCG
AGTGAATCACCGGGAGCTCCGTATGCAAGCATCCTCATCGCTGTCGTGCACTTCTGGATGGAGGTGAATCCAAGGGCGCC
GATGCAATCCATCTTGCACTTGAAGTAGTTGTCGAACTCCCGGATGAAATTCACAATCCTGAGAAAGAGCTTTCGGCTCA
TCCGATAACGGCGCCGAAATGTTTTCTCGCCGTGAAGTGGAGCATCGGCGAAGTAGTCGGAGTAGAGCATGAAGTAGCCT
TCGAGACGATGCCGGTTCTTTGCTTTCACCCGCCCCGGCGCCGAGCCACCTCGCCGCGGCTTTTCATTGCTCGCTAGCAG
CTGGGCGAGGACGGCGAACACCATGAGATGCTCTTCTTCCTGGATGTCGGCCTCGGCTTCCTCCTCCAGCAGCGCGGCGA
GCGCTTCCTCGTCATCCGAGTCCATCGCCGAGTCAGGCAAATCGCCGAACACCTTGCGCCCGGTGGGCGTGTCCCCGCCG
CTAAACTACCCCTCCGTGGCCGGAAACGCCCAGCTGCTGTTGGAGGGGCTGCTGCGGCGAAGCTTTGCTATTTTTCTGGC
GTGGAATGGCTATCTAGTGGTGAAAGGCGGCGGGCGGCGCCGGGATATAGCTACTGGCGGCCGAGGGCGCGGGGGTGGGA
GGCGAATCAGGGAAGAAAACCTTGACTTTTCCCCTGATAGCGTGGGTCAGCCGCGCTTTTCCCTTGCGTCGGAGCCCCCA
ACTGTCCCTAATGCGCCGGGTTCGGCCTGTGATCGCCGGGCGGAAAAAAGGCCCGAGCCGGCGTTTTTCGGCGTCTAGGG
ACGCGACTGGGCCGTTTTTTCGGCGCCGGCGCAACAAAAACGTCTAGAAAGAACCTGTTGGAGACGTGGCTGGAGATGCT
CTAAGCCCGCCTTGGCAAGAGGGAAACGGGCTCCATTGCCCCGGCAGAAAGGCGGCTTCTTCAGTGTGCTTCCACGTCAT
CCCAATCCAGAGCCCAACGAGCTCCGCCACACTCCCACCGTC-----CCCACGACCCACTCACCACACCACATTTATCTG
CAG--------AGAGTGAGCCGCGCAGCAGCAGCGCATAATCACAG--ACA-TATCCACCTCCAACCACGCCGGTGGCCA
CAC--ACAGACACACTTTCGCCGGAGCTCAGGTGAGGT----GTTCCAATGGCGGCCTCGCCGACGGGGGTCGCGTGCCC
GGTCTACCCGTGGCCGAGCGACGCGTAAGCACGTCACACCAGCCACCAGCACTCACTGAACTCTTCTTCTGAACATCTCG
TGGGGGTTGATGGTT--GCTGGTTGTGATGGACTCGCAGGGCGCAGCGCGGGGCCAAGGTGTTCATGCAGAGCGACTGCG
CGGCGTGCCACTCCGCGCTCCCCTACGCCGGCCTCCGGGGCGCCGCGGTGCCGGGCCAGGACGCGGGAGCCATGACGGCC
GAGATCCTCGTCGCGG------------AGGAGGCGCGGCCGGCCGGGATGACGACGACGACGCTCCATGGCGGCGCCGC
CGCGCAGACGCCGGACCTCGCCACCGTCGTCACAAGAGTAAGCTCAAACGCTCGCTCGCTGCCATCTCTGCTTCTGCAAC
TGCTAACAAGGTGTGATCTACAAC-------TGTGTTTCACGCTGTATGTTTCATCTTTGAGC-----------------
--------------------------------------------------------AGATCCAGGGCGGGCTGCGGGGCA
ACCTCTACTCCACCGGGACGG---------CGGAGCCAGTTAGGGCGATGCTCGCCGGC---------GCGTGCCAGGAG
CTGAAGAAGAGCCCCGTGTGGCTGCAGTTTGCCCAGGCCTTCCAGGCGGCTTGATGGGATGGACCCATCTCCAGCGACAC
GACCTGCTATGCCCAAGCTTGCCTCATCTCTGTGTCCAATATG--TGTCTGTAACATATGTATAAATCACATCACACTGC
ACCTTGTGCTGGATCAAGTAGCATCGAAATAAAGCACTCCTGTGCAGCCGTTCCATGTTAAAT-----TCATGCGTTCCA
GACAGGCACCCCGTGAGC------------------------------AGCAGCCTAGATGCTAAGCTGTGACAATAATG
GCAATATCATCCATGACAGGTTTGCAGTACAGGGAGATGTTAGGAGCTGTAGAGAGGTAAATACAACAAAGCTTCCTAAC
CAGTGAGCACCATCAAATCAAAGGTGAAAAACAGGCCCGCCATGTATGGCGGTGCTGCCATCGACGAAACATATGTAAAC
TAAAATGTGACCATAGTTT-GGTATGAAGAAATAAATGTTCGGCGCTCCAAATCAAAAATCTGTGTACCAAAGTCAGCCC
ACAATAATTACAGTGCCTGAAAAAGATCACCTGAGACAGCAATTAGATTAGGCTATGATCCTGACTTTCTGAGCTACTCT
T---TCGA-TCTAATCAGCTCATTTTGTTTGCGATTCCGAGTAAATGATGT---GCATTCATTCCTTTTCCGGATGGTTC
TCTTCCGCTGAATCAGCGTCTGCTGTTTGTTCTCTGTATGCTTCCTTGTGATCCACAGACTGCGTGTTTGAATGCTGGAA
CCTCGGTAGCGCGCCGAGCTGTTTTAGGCTCTCGCCCTGCCTCGCGATCACCATCTCCAGGTACTTGCTGTGTTCTTCTA
CTTGCAGCTGCATCTTTCTTTGGAGCTGTGAAGAGGGGGGAAAAAT----AAAAGAGAACCCAAATTACTAAAATAGATG
GA-AGTTCACACGTCTGTTCTTGCCAGTTACAAGGAG----AATATGCATACCTCAAGCTGTGCATGAAGTTGCTTCTGC
AAGCCAATCTGAGTTCTTAGCCCTTCACTGGCCTCCATGTGTCTGCACCAAGTGTAAAGTGAATAATTAGAACTCTGGAA
CTCGCACAGACACA------------------------------------------------------------------
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--
>chr6B_878
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-------------------------------------------------------------CAGTGTGCGTACACGTCGC
CCCAATCCAGAACCCAGCGCGCTCCGCCACACTCCCACCGTC-----CCGACGACCCACTCACCACACCACACCACACCA
CACTTATCTGCAGAGTGAGC--CGCCGCAGCAGCGCCCGCTCGCAGACACGCTATCCACCTCCAACCACGCCGGCGGCCA
CACGCACAGACGCACTTGCGCCGGAGCTCAGGTCAGGCGAACGTTCCAATGGCGGCCGCGCCGACGGGGGTAGCGTGCCC
GGTCTACCCGTGGCCGAGCGACGCGTAAGCACGCCAC---------CAACGCTCACTGAGCTCTTCTTCTGAACATCTCG
TGGGGGGCTGATTGCTGGCTGGTTGTGATGGACTCGCAGGGCGCAGCGCGGGGCCAAGGTGTTCATGCAGAGCGACTGCG
CGGCGTGCCACTCCGCGCTCCCCTACGCCGGCCTCCGGGGAGCCGCGGTGCCGGGCCAGGACGCGGTGGCCAGGACGGCC
GAGATCCTCGTCGCCG------------AGGAGGCGCGGCCGGCCGGGATGACGACGACGCCGCTCCATGGCGCCGCCGC
CGCGCAGACGCCGGACCTCGCCACCGTCGCCACAAGAGTAAGCGCACTATCTCGCTGCTGCTGCATCACCATTCTGGCAT
CTACAATGACTAGTACAG-----------TATGTGTTTCACACTGTACGTTCTTC---TGAAC-----------------
--------------------------------------------------------AGATCCAGGGCGGGCTGCGGTGCA
ACCTGTACTCCGCCGG------GACGGCGGCGACGCCCGTTAGGGCGATGCTCGCCGGCGGCGCCGCGGCGTGCCAGGAG
CTCAAGAAGAGCCCCGTCTGGCTGCAGTTTGCCCAGGCTTTCCAGGCAGCTTGATGGGATGGACCCATCTTCAGTGACAC
GACCTGCTATGCCCAAGCTTGCCTCATCTCTGTGTCCAAGATGTATGTCTGTAACATATGTATAAATCACATCACATTGC
ACCTTGTGCTGGATCAAGTAGCATCGAAATAAAGCACTCCTGTGCAGCCGTTCCAAGTTAAATTCAACTCATGCGTTCCA
GACAGGC----CGTGAGC------------------------------AGCAGCCTATATGCT-----GTGACAATAATG
GCGATATCATTCATGACAGGTTTGCAGTACAGGGAGATGTCAGGAGCTGCAGAGAGGTAAACACAACAAAGCCTCCTAAC
CAGTGAGCACCATCAGATCAAAGGTGAAAAACAGGTCAGCCATGTATGGCGGCACTGCCGTCGACGAAACATACATAAAC
TAAAATTTGACCATTGTTT-GGTATCAAGAAAGAAATGTTCGGCGTTCCAAATCAAACATCTATGTAGCAAAGTCAGCCA
ACAATAATTACAGTGCCTGAAAAAGATCACCCGAGACAAAAATTAGATTAGGCTATGATCCTCATTTTCTGAGCTACTCT
TGTCTCGA-TCTAATCAGCTCCGTTTGTTTGCGATCCCGAGGCAATGATCAGAAGCGGTCATTCCTTCTCCCGATGGCTC
ATTTCGGCCGAATCAGTGTCTGCTGTTTGTTCTCTGTATGCTTCCTTGTGATCCACAGCCTGCACGTTCGAATGCTGGAA
CCTTGGTAGCGCGCCGAGCTGCTTTAGGCTCTCGCCCTGCCTCGCGATCACCATCTCCAGGTACTTGCTGTGTTCTTCTA
CCTGCAGCTGCATCTTTCTTTGGAGCTGTGGAGAGGGA--AAAATAAAAGAACAGAGAACCCACGTTACTAAAATAGATG
GGGAGTTCGCACGCCTTTTCTTGCCAGGTCCAAGGAGTGAAAATATGCATACCTCAAGCTGTGCATGAAGTTGCTTCTGC
AAGCCAATCTGAGTTCTTAGCCCTTCACTAGCCTCCATGTGTCTGCACCAAGCGTAAAGTGAATAATTAGAACTCTGGAA
CTCGCACACACACACACAAAAAAAAAAAAAA------------------ACTTTACTGTGGACCGGGCATTGCACCATTT
CATGGATGTCTTTGAAATACGTCTGAAGCTAAAATAGGTTACTGATGGCATACGTATCTTCCAGGTTGGTGCACAGGTGG
TACATATATAC---------------------------------------------------------------------
--
>SNPs
-------S---------------------S----S--S-------------------S---------------------S
SSSSSSSSSSSSS------S-------------S-----------S----S-S-S--SS---------------------
---------------------------------------------S-------------S-S-SS---------------
-----------------------------------------------------------S--------S--S--------
----------S---------------S-S-SS---------------SS---------S--------S------------
--------------------------------------------------------------------------------
----------------S----------S----------S-----S-----S-----------S-------SSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS----S------------
----S-------S-----------SSSSS-----------S-S------------SSSSS-----S--------------
----------------------------S-------S---SS----SSSSSSSSSSSSSSSSSSSSSSSSSSSS------
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----------------------------------------------------------S----------S-S--------
-------------------------------S---------S--------------------------------------
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--------------S----------------------S---S-----------SS-------------------------
---------S-----S---S----------------------SSSSS---------------------------------
---------------------------------------------S----------------S-----------------
-------------------------------S---S--------------------------------------------
-------------------------------------------SS------------S------------S-S-------
-S-----------------------------S------------------------------------------------
-------------------------------------S-----S-----------------------------------S
-----------S----SSSSSSSSSSSS---------S------SSS-SS--S----S----S-SSS-S-----------
-------------------------------------------S---S--SSSSSS-SSSS----SSSS--SS-S--S-S
---SSSS--S--SSS-SSS-SS--SSSSS---------S-------S-S-S--S-SS-S---SSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS------------------------
-------------S-------S-------S--------------------------------------------------
-------------------------------------------------S------------------------------
-------------S-------------S----------------------------------------------------
---------S--------S--S------------------------------------S----SS---S-----S-----
------------------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSS------------SSSS----------S-----
S------S------SS-S-----SSSS-------------------S---------------------------------
-----------------------SS-------------S---------S------SS-------S------S--------
--S-S-----S--------S-S--------------S----S----S---------------------------------
--------------------------------------------------------------------------------
------SSS----------------------------S--------------------------------S---------
S-------------------------------------------------------------------------------
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---------------------------------------------------S----------------------------
S-----SS---------S--------------------------------------------------------------
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------------------S-S-S-S-S-S-SSSSSSSSSSSSSSSSSSS----S---------S---------S------
--------SSS---------S--------S----S------------------S---------------S--------S-
-----------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SS
>forward_89
---------------------------------------------------------------------AAGCTCTCCGC
ATTTGCTCT-----------------------------------------------------------------------
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>reverse_4435
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----------------------------------TGCTCATAGGCCATAGCAGC--------------------------
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--
>forward_139
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---------------------------------------TCATCTGCATCGCACTCTCC---------------------
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>reverse_4436
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-----------------------------------GCTCATAGGCCATAGCAGCC-------------------------
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>forward_786
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----------------------------------------------CACCAGATATTCACCCCCGG--------------
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>reverse_4496
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---------------GCCGGTTTTACAAGGAGATGC--------------------------------------------
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--
