>input_sequence_62849
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-----------------GCCAGCCAGCCATTGGAGGAGGTTCCATTTCCTCTCTGTTTTGCTCTAAACTTCGATCCACCC
CGACCGACCGACCGACCCCAGCGTCGTTGCCTCTCTTCCTCTTCTTCTTCCTCTTCTTCTTCTTCTTCTTCTTCTTCTTC
TCTAGCTCGTTCTGTCTC-----CCCTGCCCCGTGCTGAGCCAGATGGAGGTAAGGCATCCCATACCAGTGCCAAGCTCG
TCGAGGATCATGGGTGTGGTGTTCATCCTTGTGGTCGGTCTGTTTCTGGTGTTGCAGAAGGCGAGGAGGCCTCAGGTGCC
GGCGTTCGGGGAGTGGAACTACTACTACCACTACGACGAGCCGGA------GGCGGCGTGGTACGCCATGCCGGAGCCGC
AGGCCTGCAGCGACGTGTGGTTCAAGTACTCGCCGCCCCCGCGCAAGCCCGCGCCCACGCCCAAGAAGCAGCAGGCGAGG
AGGAGGCGGCCGGCGGGCTGCGACGGCGTGTCCGGGGCGCGTCAGAGCGCGAGGCCGTCCTTGGACGCTGCTGCAACGGC
CAAGGGCGGCGCCTCCAGGCGGGTGGTGCGGCCGGTCGACGCGGACCTGTACCAGGTGCCGCCGCCGGAGTTCACCCCCA
ACCGGCGGCCAGTTAAGGTAGAGCACGCACGTACGGCCTCAGAAAAGAACGTGTAATTACTGCTGGAACGGGTTTCTTTA
ATTGTTTGTCGTAATGGTTGGAACTTACTGACTGATCTC-----TGTTTGAATGCAGGTTGCGCAGCAGAGGAGGAGCCT
GTGGATGATGGGCTGCCTGGGCTGCGTCGCCTGAAGCCCTCAACCTATCCCGTGCTGACCAGACACGGTCACT-------
-----------------------GGATGCTGCGTGTTCATACCGTAGCAGTAGTATTTACATTTTTCACTTTCACTTTCT
CTTGTTGGTAGTAGTTTTTACTACG-------------------------------------------------------
-TTTTCGAGTTGGAGTTTTTA---TCTTTTTTGTGCGATGTGGGT------AAACTAGGCATTAACATTTCGACCTTCTA
CCCTGTTTGTGTAATAC-------------------GGTGAGGTTTCGTTGT----------------------------
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------------------
>chr5A_1_TraesCS5A01G289400
CACAATTACTGTTTTTGAAATCAAG--TTTTTCTAGGTCGTTCGTCAATGTGTTTCACCATGAAACTTTGAATACTGATT
TTGGGAAGAGAAAAATAAGCATGCGCGCTAGCGCCGGAGGACTAAAAGGCATTTCTTCGGTCTGTCCTTGCTAAACAAGT
CTGAAACAATG-------TAGCTGCCCAAACCGTGCAATTTTCGCTAGAGCAAAGCC-------CTACAATACTTTTTGG
AGTATTCCATCTCCATTTTGAGAGTAAAATTTTCCATCGTTTATAGAGTTAAGAGCATCCAACGTTTACGATAGGTGTAC
TCACTCATTTGAATG------CTACCTCGAGTGACACAATCCGAGATTCCGAGCCACACTTGTCGACACCGGAGCAGAAG
CAATAATAATACAGTAGTAGTACAAAGCTTGCGGTAGAAGCCATCTTGTCAAAGCGTGTTACCGCC---ACACCTCGGAG
TCATTCGGCCAGCAGGGCGTGCCAGCTTCGCGACGCTCACTCCGATTTTCTAATAATCGGCC------------------
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-----------GGCGATGATGCCGAAACACCACAGCACGGGCGCGCG--ACAAGAGGGCCGCGGGGGTCAGCGGCGAACC
CGGCGACGACATGCAGATGCAGCGAGCGTCGAAAAGGAACGGCGCCCGATGCGCGCGCAGTAAAAGCCCGCGCGCCAAAC
GAGGGACCACGGCCGGCCGGACA-GACAGGCACTGCTCTGCCCGTCGATGCCTACTACTAGCTCGCCTGCCGCAGGCTAC
AGTGGGCTAGCTGCAGTGCTCCTACCCCGCTGAAAAGGTCCGGCCTTCCATACTGCCCCCTCTCTCCCTCTCTCTCCCTT
GCTCGCTCGCTCGCTCTTTCTCAAACCTCGCCGGTCCCGAACCCGAAGCCCCATTCCTCACTTCAACGCCGCGCACCGGA
GCGCGCGCCCGGCTTGCCACTCTGACCGGCGTGGCTGGCGCTCCGTTGCTCCCCCGGCTCTCGCTATAAATATAGTGCAC
GCGTGTCCAGCTAACCAGCCAGCCAGCCATTGGAGGAGGTTCCATTTCCTCTCTGTTTTGCTCTAAACTTCGATCCACCC
CGACCGACCGACCGACCCCAGCGTCGTTGCCTCTCTTCCTCTTCTTCTTCCTCTTCTTCTTCTTCTTCTTCTTCTTCTTC
TCTAGCTCGTTCTGTCTC-----CCCTGCCCCGTGCTGAGCCAGATGGAGGTAAGGCATCCCATACCAGTGCCAAGCTCG
TCGAGGATCATGGGTGTGGTGTTCATCCTTGTGGTCGGTCTGTTTCTGGTGTTGCAGAAGGCGAGGAGGCCTCAGGTGCC
GGCGTTCGGGGAGTGGAACTACTACTACCACTACGACGAGCCGGA------GGCGGCGTGGTACGCCATGCCGGAGCCGC
AGGCCTGCAGCGACGTGTGGTTCAAGTACTCGCCGCCCCCGCGCAAGCCCGCGCCCACGCCCAAGAAGCAGCAGGCGAGG
AGGAGGCGGCCGGCGGGCTGCGACGGCGTGTCCGGGGCGCGTCAGAGCGCGAGGCCGTCCTTGGACGCTGCTGCAACGGC
CAAGGGCGGCGCCTCCAGGCGGGTGGTGCGGCCGGTCGACGCGGACCTGTACCAGGTGCCGCCGCCGGAGTTCACCCCCA
ACCGGCGGCCAGTTAAGGTAGAGCACGCACGTACGGCCTCAGAAAAGAACGTGTAATTACTGCTGGAACGGGTTTCTTTA
ATTGTTTGTCGTAATGGTTGGAACTTACTGACTGATCTC-----TGTTTGAATGCAGGTTGCGCAGCAGAGGAGGAGCCT
GTGGATGATGGGCTGCCTGGGCTGCGTCGCCTGAAGCCCTCAACCTATCCCGTGCTGACCAGACACGGTCACT-------
-----------------------GGATGCTGCGTGTTCATACCGTAGCAGTAGTATTTACATTTTTCACTTTCACTTTCT
CTTGTTGGTAGTAGTTTTTACTACG-------------------------------------------------------
-TTTTCGAGTTGGAGTTTTTA---TCTTTTTTGTGCGATGTGGGT------AAACTAGGCATTAACATTTCGACCTTCTA
CCCTGTTTGTGTAATAC-------------------GGTGAGGTTTCGTTGTGAATGCAACGTCTCTGCGGTAGCACGTT
GGTACCACTACCACTCTTCATTAGCCTGAAAAAGCACGATGTCTACTT-TTCCGATCAAGTTTAAGTTGCAAGCAAACGA
GCTCTGACAG-------CACATTGCATTGCACTTGCAC--GAGAAGACACGGCGACTTTTGGGTCCGGGCTTGGCCCTAT
GCATCCCGGGGTCGTGT------GCCCACGCCAGTCCACTGTATCAGCGACCGCAATAGGCAATGGGT------------
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-------------------------------------------------------------GCTCATGAGCGGCTGTGCA
TGCAGCATGCGGGGCCGCCAGGCCTGATGAGGCCTGGTACCGGCATTGATACGTGGTGCAGTTGGACGTTTGCGAAGCCG
GCTCACGCGTGCCTACCGCTT--------------------------------------------GCGCAGCGCAGAGAT
AGTTCGAGCATGGTCAAACCGTCACAGACGGAAAGCTCATGAGCTTGCGCGGCCATTCCTTCCTGGCTGCGTGCCCGTGT
TTTCAGCGTCAAAGGGTTTTGAGCTC------------------------------------------------------
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-------TGAGCGAGGTCAAAGGGTCAAAGACGAAAAGCGCAT-GGCTTGCTTGTTGTGCGGCCATTCCTGGCTGGCGCT
GGCGGCGTGCGATTCAAGAT------GAGGCGAGGGGTTCAGGTTCACATCTGAGC-----GAGGTCAGGCCGGGCG---
-----GGAAAAAGCTCGAGAGATGAGCGCCGTTGC----------------------------------CTGTTGGTGTG
CGCTGCGCAGGCCGTGGTGGGAAG-CGTTCACATGATTGCGACGGTGACTTGGACGTACAGCCCT---------------
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---------------------------------------------AGGCCCGAGCTGACGAGCTATATGCATTTTCCGTT
CTTGCGTCGGCCAAATCTTTGGATCGAAGTTCAAGAAAATATACTAATCTTTGGATCAGAGACCGGAGGGACGCTTAATA
--ATTGTTTTATTTTTGCGGGGAATGCTGTTGCCCTCCGGGTTTTCT---CACGCATGTCGTATCGGACAAGCCTTGTGA
GGGAGGACGC------------TCGCATCCTGCATCCAACTGCTCTTCTCAACGATCCGCGCTCTGTTCACCGCTTCAGT
CTTCACCAACGATACGAT
>chr5D_1
CACAATTACTGTTTTTGAAATCTTGATTTTTTTTTAGCTGTTCGTTAATGTGCTTCACCATGAAACTTTGAATGCTGATT
TTGAGAAGAGAAAAACCAGGCGCAT---TAGCGCCGGAGCACTAAAAGGCATTTCTTCGGTCTGTCGTTGTTAAAGAAGT
CCGAACTCCGAAGCAACATAGTTGCCCAAACCTTGCAATTTTCGCTAGAGCAAAAGCCCTAGTACTACAATACCTTTT--
-GTACTCCATGTGCATTTTGAGAGCAAAATTTCCATCGTT---CAGAGTTAAGAGCATCCAACGTTTACGATAGGTGTGT
TCACTCATTTGAATACTAGTACTACCTCGAGTAACACAATCCGAGATTCCGAGCCACACTCGTCGACACGAGAGCAGAAG
CAATATTAATAC----GTAGTACAAAGCTTGCGGTAGAAGCCATCTTGTCAAAGCGTGTTACCGCG---ACACCTCGGAG
TCATCCGGGCAGCAGGGCGTGCCAGCTTCGCGACGCTCACTCCGATTTTCTAATAATCAGCC------------------
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-----------GGCGATGATGCCGAAACACAACAGCACGGG-GCGCG--ACAAGAGGGCCGCGGGGGTCAGCGGCGAACC
CGGCGACGACATGCAGCGAG-----GCGTAGAAAAGGAACGGCGCCCGATGCGTGCGCAGTAAAAGCCCGCCCGCCAAAC
GAGGGACCACGGCCGGCCCGGCCGGACAGACACCGCTCTGCCCGTCGATGCCTA----------GCCCGCTGCAGGCTAC
AGTG--CTAGCAGCAGTGCTCCTACCCCGCTGAAAAGGTCCGGCCTTCCATACTGCA-CCCCCCTCTCTCTACC------
----GCTCGCTCGCCCTTTGTCAAACCTCGCCGGTCCCGAACCCGAAGCCCCATTCCTCACTTCAACGCCGCACACCGGA
GCGCGCGCCCGGCTCG---CTCTGACCGGCGTTGCTGGCGCTCCGTTGCTCCCCCGCTTCTCGCTATAAATAACTACACG
CACA-TCCAGCCAGCCTGCCAGCCAACCATTGGAGGAGCTTCCAT-CCCCAC----------------------------
--ACTGACCGGCCCACCCCAGCTTGCTTGCTGGCTTC--------------------TCTTCTTCTTCTCTAGCTCCTTC
TCTAACTCCTTCTGTCTGCCCTGCCCTGCCCCGTGCCGAGCCAGATGGAGGTAAGGCATCCCATGCCAGTGCCAAGTTCA
TCGAGGATCATGGGTGTGGTGTTCATCCTTGTGCTCGGTCTGTA-TTGGTCTTGCAGAAGGCGAGGAGGCCTCAGGTGCC
GGCGTTCGGGGAGTGGAACTACTACTACCACTACGACGAGCCGGCGGCGGCGGCGGCGTGGTACGCCATGCCGGAGCCGC
AGGCCTGCAGCGACGTGTGGTTCAAGTACTCGCCGCCCCCGCACAAGCCCG------CGCCCAAGAAGCAGCAAGCGAGG
CGGCGGCGGCCGGCGGACTGCGACAGCGTGTCCCGGGAGCGTCAGCACGCGAGGCCGTCCTTGGACGCCGCTGCAACGGC
CAAGGGCGGCACCTCCAGGCGGGTGGTGCGGCCGGTCGACGCGGACCTGTACCAGGTGCCGCCGCCGGAGTTCACCCCCA
ACCGGCGGCCAAGCAAGGT---------ACGTACGGCCCCATAAAAGAATGTGTAATTACTGCTGGAGCGGGTTTCTTTA
ATT-TTTGTCGTAATGGTTGGAACTTATTGACTGATCTTTTCGTTGTTTGAATGCGGCTTGTGCAGCAGAGGAGGAGCCT
GTGGATGATGGGCTGCCTGGGCTGCGTCGCCTGAGCCGAACCCCTCCCATGCCTGCCAACGGGAAG--------------
---------------------CGGGAAGCTGCGTGTTTATACCGGAGTAGTA----------TTTACATTTTCACTTTCT
CTTGTTGTTGGGTAGTTCTCTCTCTCTGCGACGTTCGTGGTGATCTCTTGGCTTGTGGCAAGATAGTTATTACTGCTACT
CTTTTAGAGTTGGACTTTCTACTCTCTTTTTTGTATGATGTGGCGTGGGTAACACTGGCTATGACCATTTCGAGCTTCTA
CTCTCTCTCTCTCTCTCTCTCTCTCTCTGTAACGTGGGTGAGGTTTCCTTCTGTGTGCAACATCTCTGTG----------
----------------TTCATCAGCCCGAG-AAGCACAATGTTTACAAATTCTGATCAAGTTTAAGTTGCAAACAAACGA
GCTCTCACATCACACTGCA-------------TTGCAC--GAGAGGACACGGCGAC-ATTGGGTCCGGGCTTGGCCGTAT
GCATCCCGGGGTCGTGT------G------CCAGTCCACTGTATCAGTGACCGCAATAGGCAATGGGGGCTCCTGAGGCA
AATTTGACAAATTTAACCTATGGACGAAATCAAATCCCGGAATGAACTGTCCATGAAACTATTTCACGCGGCTGACCTTT
TTATGTGACGTCCGACACGAAGGCGTCACACTATACTGTGCAACGCCTCATAGATAGGCGCTACACGCCTGGCCAGCGTT
GCACCCGTGTGATCCGAAAATTACTAAGTCAGTGTGCAGCGCCTGAGAGCTAGGCAGTGTGGCGCCTAGCTTTTAGGCGT
TGCACTAGTGGTTGCTTCATTTTGTAGTGCAACCACTAGTGCAACGCCTGAGAGTTAGGCGCCACACTATACAGTGCAGT
GCCTAGCTCTTAGGCTCTGCACAATGACTTAGCAATTTTTAGGCAGTCTGGGGTGCAACGCTGGCCAGGCGTGTAACGCC
TATCTGTGAGGTGTTGCACAGTGTAGTGTGACGCCTTCGTGTCGGGCGTCACACAAAAAAGTCAGCCGCGTGAAATAGTT
TCACGGACAGTTCATTCTGTGATTTGATTTGGTCCACAGATCAATTTTGTCAAATTTGCCGGCTCATGAGCAGTTGTGCA
TGCAGCATGCGGGGCCGCCAGGTCTGATGAGGTCTGGTACCGGCATTGATACGTGGTGCAGTTGGATGTTTGCGAAGCCG
GCTCGCCCATGCTGCA------------------------------------------TGCCGCAGCGCAGTGCAGAGCA
GAGGGGCGCGTACATAG---------------------------------------------------------------
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-----TTTGAGCATGGTCAAACCGTCATGGACGAAAAGCTCATTGGC-------TTGTGCGGCC----------------
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>chr5B_245
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--------------------AGAGTGAAATTTCCATCGTT---TAGAGTTAAGAGCATCCAACGTTTACGATAGGTGTAC
ACACTCATTTGAATG------CTACCTCGAGTAACACAATCCGAGATTCCGAGCCACAACTGTCGACACCAGAGCAGA-G
CAATAATAATATACT----GTACAAAGCTTGTGGTAGAAGCCATCTTGTCAAAGCGTGTTACCACTACTACACCTCGGAG
TCATTCGGGTAGCA-GGCGTGCCAGCTTCGCGACGCTCACTCCGATTTTCTAAGACTAGCCACAATGATAACATGCAATA
CTTCATTTGTTATGCTATAGACTCATTTTACTTTGATATGTGTGATGTTACAGTAACTAGTTAAGTTACTAGAACTATCT
CTCTTTTCATCAACTCATTGTCACATAGACAAATTTGCTGAGTTGGACTTGAATTTACTGCTGACCATTGTGGCTAGTCT
AATCAGCCGGTGGCGATGATGCCGAAACACAACACGGCCGG-GCGCGCGACAAGAGGGCCGCGGTGGTTAGCGGCGAACC
CGGCGACGACATCCAGATGCAGCGAGCGTCGAAAAGGAACGGCCCCCGATGCGTGCGCAGTAAAAGCCCGCGCGCCAAAC
GAGGGACCACGG-----CCGGCCGGACAGACACCGCTCTGCCCGTCGATGCCTA----------GCCCGCTGCAGGCTAC
AGTT--CTAGCAGCAGTGCTCCTACCCCGCTGAAAAGGTCCGGCCTTCCATACTGCCTCCTCTCTCTCTCTCTC------
----GCTCGCTCGCTCTTTGTCAAACTTCGCCGGTCCCGAACCCGAAGCCCCGTTCCTCACTTCAACGCCGCACACCGGA
GCGCGCGCCCGGC-----------------GTGGCTGGCGCTGCGTTGCTCCCCCGGTTCTCGCTATAAATATAGTTTAC
ACGCGTGT--CTAGCCAGCCAGCCAGCCATTGGAGGAGGCTCCGT-TCCGCTCTGTTTAGCTCTAAACTTCGCCCCACAC
TGACCGACCGGCCGACCCCAGCTTGCTCGCCTC---------------------------------TCTTCTTCTTCTCT
ACTAGCTCGTTCTGTCTG-----CCCTGCCC-GTGCTGACCCAGATGGAGGTAAGGCATCCCATGCTAGTGCCAAGTTCA
TGGAGGATCATGGGTGTGGTGTTCATCCTTGTGGTCGATCTGTTTTTGGTCTTGCAGAAGGCGAGGAGGCCTCAGGTGCC
GGCGTTCGGGGAGTGGAACTACTACTACCACTACGACGAGCCGGA------GGCGGCGTGGTACGCCACGCCGGAGCCGC
AGGCCTGCAGCGACGTGTGGTTCAAGTACTCGCCGCCCCCGCGCAAGCCCACGCCCACGCCCAAGAAGCAGCAGGCGAGG
AGGAGGCGGCCGGCGGGCTGCGACAACGTGTCCGGGGAGCGTCAGCACGCGAGGCCGTCCTTGGACGCTGCTGCCGCGGC
CAAAGGCGGCGCCTCCAGGCGGGTGGTGCGGCCGGTCGACGCGGACCTGTACCAGGTGCCACCGCCGGAGTTCACCCCCA
ACCGGCGGCCAACAAAGGT---------ACGTACTGCCCCAGAAAAGAATGTATAATTACTGGTGGAAT-GGGTTCTTTA
ATT-TTTGTCGTAATTATTGGAACTGACTGCTGT---------TTGTTTGAATGCGGCTTCTGCAGCAGAGCAGGAGCCT
GTGGATGATGGGCTGCCTGGGCTGCGTCGCCTGAAGCCCTCAACCTCTCCCGTGCTGACCAGACGGGATGCTGCGTTAGC
CCGGTTCAAAAAAAAAAAAGTCGGGATGCTGCGTGTTTATACCGGAGTAGTAATATTTATATCGGA-ATTTTCACTCTCT
CTTGTTGGGTTAGT----TCTGTCTCTGCGATGTTCGTGCTGCCCTCTTGGCTTGTGGCAAGATAGTTATTACTGCTACT
CTTTTCGAGCTGGAGTATCTACTCTCTTTTTTGTGTAATGTAATGTGGGTGCGGT-------------------------
------------------------------------------------TTCTGAATGCAACATCTCTTCGTTAGCACGTT
GGTGCCACTATTTCCATTCATCAGCCCGTG-AAGTACAATGCCTACAG-TTCTGATCAAGTTTAAGTTGCAAACAAACGA
GCTCTCACATGTCACATCACATTGCATTGCACTTGCACAAGAGAGGAGACGGCGAC-TTTGGGTCTGGTCTTGGCCCTAT
GCATCCCGGGGTCGTGTGCCCACG------CCAGTCCACTGTATCAGTGACCGCAATAGGCAATGGGGG-----------
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--------------------------------------------------------------CTCATGAGCAGTTGTGCA
TGCAGCATGCGGGGCCGCCAAGTCTGATGAGGCCTGGTACCGGCATTGATACGTGGTGCAGTTGGATGTTTGCGAAGCCG
GCTCACGCGTGCCTACCGTTTTCAGCTCGCCCATGCTTGCATTCTGCAGGCGTGTGTGTGCCGCAGCGCAGCGCAGAGAC
GCGCTGACCGCTGTG-----------------------------------------------------GCGTGCCTGTGT
TTTTAGCGTAGATGATTTGGATTTTTTGTTGAAAAGGACCACATGCGCGAATGAATTGACAAAAAGGACCACCTGCCGAT
AAATTTAACAAAAAGACCCCCTCGGCTATGGCGGCAGGTGCGGCAGACGACACGTGGCACCTGCCGCCACACAGCGAGGC
GGCAGCACTGTACCAACGGGAATGGCGCTGGCGACGGAACGGCAGCGGCGTGTGGGGCCCAGCCGCCAAGGGGCGTGGCG
GCAGTACTGTACCTGGGGAGCGGCCGCCTCGCGGGCTGGCGGCAGCCCTGTTCATGGCCCTGCTGCTCTACTACTACGTT
GATTGCTACTGCTGCATGTGCTTTTAGCCGGCCACTGCTGCTGATTGGTACTGCTACTGCATGCGCTTTTAGCCGGCCAC
TGCTGCTGCATGCAAGATGTTATTTTCTTGACATGCACGATGTTGTTAATTCTGTCATTAACCTTTGTGTTAGAGCAGGA
ATTAGTAAAGCAAATATTTAACAGTATTGTAGATCAGCTTTAGGCCTTTAAAATGCATCGATTTAGTTTGACATGCAAGA
ATTTATAAATATGGTAAGTAAGAAAAAGTTTGTGTTGTTATTGGTCATTGGATGATTTAATGCGTTGTTATTTCATGTGG
TAAAAAAATATATTAATAAGTTGTATAGTTACGAAACCGTAGGTCTATTTTGTTAATAATCTAAGTTTTGTATATTATAA
AATGCTAATATCCTTAATGATGTATGTAATTAGGTAAAAAAGGTATCATCTGAGTAACAAACAAGGAGGAGATGACGTAG
TTGAAGAAATTGCGTTTCGATCCTCGATCTCCCTTTTGACGGTTAATTTTATTCGGAACGACATCCATATTGAAGCTGAG
GTATAAATGACGCCGTGTAATATTATGAATATTTTTTATATTGATGTACTGTTGCGAATGATGTTACCGCTGCTTTGAAT
ATTTGTCGTATTATTATCCGTAAACAAACTATTATGTTTAAATTCTAAGCAAATGATACTAAAAGCAAACCGATTATTGC
TAACGGAAATACGGTTATTTATTAAGTCATACTATTTAAATGTTATCATCATATTATTATGTTTCCAGTCGAACCGAATG
ATATTAATAAAAAATGATTATTTCAAACGTAAATACGGATGTTAAAATGTTTTTCCACTTGATTATTAGTCAAACCGAAT
AATACAATATTCAATTACTAATTACTGGGTATATCTTACCTTGATCTATCTTTTCTTCAACTAAAACATCTTCTGCATCC
TAACTCTAATTCGTGCTCTAACACAAAGGTTAATGACAAAATTAACAACATCGTGCATGTCAAGAAAATAACATCTTGCA
TGCAGCATGAGTGGCCGGCTAAAAACGCATGCAGTAACAGTACCAATCAGCAGCAGTGGCCGGCTAAAAGCGCATGCAGC
AGCGGTAGCAATCAGCGTAGCGTGCAGTAGAGCAGCAGCGCCATGAACAGGGCTGCCGCCAGCCCGCCAGGCGGCCGCGC
CCCAGGTACAGTACTGCTGCCACGTCCCTTGGCGGCCGGGCCCCACACGCCACTGCCGTTCCGTCGCCAGCGCCGATTCC
CGTTGGTACAGTGCTGCCGCCTTGCTGTGTGGCGGCAGGTGCCACGTGTCGCCTGCCGCACCTGCCGCCACAGCCGAGGG
GGTCCTTTTTGTTAAATTTATCGGCAGGTGGTCTTTTTTGTCAATTCATTCGTCCAGATGGTCCTTTTCAACAAAAAATC
GATGATTTGAGCAAGGTCAAACTGTCAAAGAGGAAAAGCTCAT-GGC-------TTGTGCGGCCATTCCTGGC-------
---GGCGGGCGATTCAAGAT------GAAGG----------GGTTCACATCTGAGC-----GAGCCAGCCGAGGGCAGGT
CGAGCGGGAAAAACTGGAGAAATGAACGTCGAGACTCGAGAACAAGAGGTGGAGAAGGAGAACCGTGCGCCGTTGGTGTG
CGCTGCGCAGGCCGCGGTGGGAAA-CGTTCACGTCATTGCAGCCGCGGCTTGGACGTGCTGCCCCCTAGC----------
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-----------------------------------------CCCCAGGCCCGAGC-CACGAGCTATACGCATTTTGCGTT
CTTGCGTCGGCCAAATCTTTGGAT--------------------------------CAGAGACCGGAGGAAAGCTGAATA
TAATTGTTTTATTTCCGTGGGGAATGCTGTTGCCCTCCGGGTT---T---CACGCATGTCTTATCGGACAAGCCTTGTGA
GGGAGGACGCTTCCCATA---CTCCAATCCTGCTTCCAACTGCTCTTCTCAACGATCCGTGCTCTGTTCACCGCTTCAGT
CTTCACCAACGATACGAT
>chrUn_2507
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-------TGCGCGAGGTCAAAGGGTCAGAGACG----GCGCAT-GGC----TTGTTGTGTGGCCATTC----CTGGCGCT
GGCGGCGTGCGATTCACAAGATGAGGCAAGG----------GGTTCACATCTGAGC-----GAGGTCAGGCCGGGCG---
-----GGAAAAAACTCGAGAGATGAGCGTCGAGAAGAAGGGGTTCGGTCA--------AGAACCGTGTGCTATTGGT---
------GCAGGCCGTGGTGGGAAA-CGTTCACGTGATTGCAGCGGTGGCTTGGACGTGCTGCCCTGAGATCCAGTGACTT
TACTTGGTGAAGTCACGTTGCAACTTTAGGCTCTTCATCTCCATCCAAAACAGATCCAACGGTCCATATCACACAAAGGC
AAAAGCCCTCAGCACTTAACAGTTTTAGACGAGGGCGGGCTGAAGAAAACACTTCGCGCGAATCTACTTCGCTCTCACGC
GCCGCGTCGGCGTGTCGTACAGGGAGACGGCGCTGCTCCGCCGTGTCGGAGAGGAAGAGAAACCGCACCACACCACAGCA
TCACAGAGAGAGCAAGGGATCCGCGCCGGCCGCCGCATCCACGTGGTCGCACCGTCGCTGGAGGAGAGGGAGGGGCGGGC
TGCCGCTGGAGGAGTACGAGGGTCGCGCGTGCCGCCGCCGCCACCGGACGGGACCTCTGCCTTTCCGCATCCAGTTGAGG
TCGCGCCGTCACTGGAGGAGAGCAGGGGCGGCCGCTGCCGGAGGAGAGGAGTAGGGACACGCCGCCACTACAAGATCGTT
CCGCCAAGGAGAAGTCCATCGCTGCCACCATTTAATGAGAGAAATCGCCTCAGCATCACACCCACGAGGTAATTTTACAT
GTCCCTGCTGGCCAGTTCAGTACATGTATGTAGCTCATGAGGTTTGGTATGGCCTATTGGCCGGGCGTACAGGTTCAGTA
CATGTACACGTCCATATACTAGTGCCGATCAGGTTCAGTACATAAGCAAATTGATTGCCAATCAGGCTCATGTACAGATT
CAGTACATGTAAGTAAAACTGATTACTGTTAGTCATATTTTAACTAACTTTACTAATCTGAAACTGATTTATTTTAGTGA
TATGTAAGTAAAACTACATCTCCAGCATACTAACTGAACTGTAGCACACTAATATTGTCACTAACTAAACTTTTTTCAGG
TGTGAGTAACTGAAATCAGCATGAGTGCTCTGCTCTGAAAATTGAGAATTCTGTTGTGCCTCATAATTTTCAGTATTGTG
GAAGGTACAACCAAATGATAACCTCGCTTCCTGTATGTTGAAACAACTACAGACCTACAGTTTATATATTCAGAAATGAA
GATTAGATAGTTGGCATGTAATCTGTTTTAACTGAATCCTACCAGCAGTGTTCTGTCGCTGTTGGGCTGCAAAACTGGCC
AAGTGAGCTTTTTGCCTTTGTGTGATATGGACCATTGGATCTGTTATGGATGGAGATGAAGAGCCTAAAGTTGCAACGTG
ACTTCACCAAGTGAAGTCACTGGATCTCAGTCCCCCCCTAGCCCCAGGCCCGAGC-GATGA--TATATGCATTTTCCGTT
CTTGCGTCGGCCAAATCTTTGGATCAAAGTTCATGAAAATAA--TAATCTTTGGATCAGAGACCGGAGGGACGCTTAATA
--ATTGTTTTATTTTCGCGGGGAATGCCCTTGCCCTTTGGGTT---T---CACGAATGTCTTATCGGATAAGCCTTTTGA
GGGAGGAC------------------------------------------------------------------------
------------------
>chr5D_2510
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----------GCGAGGTCAAACCGTCAAAGACGAAAAGCGCAT-GGC----TTGTTGTGCGGCCATTC----CTGGCGCT
GGCGGCGTGCGATTCAAGAT------CAAGG----------GGTTCACATCTGAGCTTGGCGAGGTCAGGTCGGGCG---
-----GGAAAAAACTCGAGAGATGAACGTCGAGAAGAAGGGTTTCGGTGA--------AGAACCGCGTGCTGTTGGTGTG
CGCTACGCGGGCCGTGGTGGGAAAACGTTCACATGACTGCAGCGGCGACTTGGACGTGCTGCCCCCTC------------
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----------------------------------------------------AGC-GACGAGCGATATGCATCTTCCGTT
CTTGCGTCGGCCAAATCTTTGGAT--------------------------------CAGAGACCGGAGGAACGCTTAATA
--ACTGTTTTATTTTCGCGGGGAATGCTGTTGCCCTCCGGGTT---TTCTCACGCATGTCGTATCGGACAAGCCTTCTGA
GGGAGGACGCCGATGCCCACGCTCGAATCCTGCTTCCAACTGCTCTTCTGAACGATCCGCGTTCTGTTCACCGCTTCAGC
CTTCACCAACGATACGAT
>SNPs
----------------------SS--------S-SS-SS------S------S--------------------S------
---S-----------SS--SSSSSSSSS-----------S--------------------------S---S----S----
-S---SSSSSS----------S----------S---------------------SS-----------------S----SS
S---S-----S-S-------------------S-SSSSS-SSS-------------------------------------
--------------------------------S-------------------------------------S---------
-------------S-S-------------------------------------------------S--------------
--------S-----------------------------------------------------------------------
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------------------------------S----------S--------------------------------------
-----------------------------------------------------S--------------------------
------------------S-S-S------S---S--------------------SSSSSSSSSS---S--S---------
----SS-----S---------------------------------------------S--------S-------SSSSSS
SSSS---------------S----------------------------------------------------S-------
--------------S-SSS--------------------------------------S------------------SS--
S--S---------S-------------------------------S---S--------S-------------SS----S-
S---------S-----------S-SS-------SS-SSSSSSSSSSSSSSSSSSSSS-----------------------
-----------------S----------------------------------------------S-----------S--S
---------------------------------------------S----S-----------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------S------------S-------SS---------------------------------
--------------------------------------------------------------------------------
-----------SSS-----SSSSSSSSS----------S----------S------------------------------
---S----------------------------------S----------------S-S---S------------------
----------------------------------------------S------------------S-S-SSSS-------
-------------------------------------S------S--S----S------S-----S--S-----------
---------S-SSSS--S-SSSS-S-------------------------------------------------------
------------------S----------------S-------SS-------S---S-SS--S-S--------S------
-S--S-S-S-S-SSSS-------------------------------S--S----------S--------S---------
---S------SSS-SS-----S----S--SS------S--------SS----S-------------------S-------
-----S---S----------------------------------S-----------S-----------------------
------------------------SSSSSS-----------------S-------------------S------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------------------------S-S------
----------------------S-------------------------------------------S-------------
------------------S------------------------------------------------------------S
SSSSS----S-S--S-SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS-------S----
---S-----SS-S-SS--SSSSSS-S------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------SSSS-----------------------------
----------------------------S-SSSSSSSSSSS---------------------------------------
------------S---------------S--SSS----------------------------------------------
-----------------------S----------------SS---------------S-S--------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------S------------------------
-------------------------S-------S-------SSS------------------------------------
---------------S---------------------------SSS----------------------------------
-------------------------S-------S----------------------------------------------
------------------
>forward_1043
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------------------CTCCCTCTCTCTCCCTT
GCT-----------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------
>reverse_3464
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------CTCTGAGCGAGGTCAAAGGG-------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------
