>input_sequence_62845
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------------------------------------------------------ATGCTGAGGCCGATGCTGGCGTGCTG
CAAGCTCTACGTCTCCGAGGGCCGGAGCGCGGCGGCCCTGCGCGCCGTCGAGCAGGCGGCGCGCCGGCACCACCCGGCCG
TCGCCCTCGTCAACACCTTCGTCGACGACGCCTACAACCGGGTCGGCTACACGCTCGTCTCCCGCCTCCCGGACCCCGTC
GCGCCGGCCGCGCCGCTGCGGCGCGCCGTGTTCGGCATGGTCGAGGCCGCGCTCGGGGCCATCGACCTCGGCGCCCACGC
CGGCGCGCACCCGCGGCTCGGCGCCGTCGACCACGTCTGCTTCCACCCCCTCGCCGGGTCCCCCCTCCGTGACGTCGCCG
CGCTCGCCGCCGCCGTGGCCGCCGACATCGGCGACGGGCTCCGAGGTAAACCAGTCTCCTCCGTCTCTCGTTCTTGTTCC
CCTCTACTTGCCACTCCGTGCGGCGTGCTGACGCTCAGATTCGTTTCGTGCGACGGCGGCGTCGGTCCGCAGTGCCGACG
TACCTCTACGGCGCGGCGCACCGGGAGGGCCGGACGCTGGCGGCCATCAGGAGGCAGCTCGGCTACTTCAAGCCCCAGAG
CAGCGCCGAGTGGCACGGGCCGCTCACCGTGACGGCCGACGCGACGGCGCTCCCCGTCGCGCCCGACGCCGGCCCGGACG
CGGCGTCGGCGTCCAAGGGCGTGCTGGTCCTCGGGGCGACGGCGTGGGTGGACAACTACAACGTGCCGGTGCGCACCGCC
GACGTGGAGGCCGTGCGGCGGGTCGCGCGCCGGGTCAGCGAGCGCGGCGGCGGGCTCCGGTCCGTGCAGGCCATGGGGCT
CGCGCACGGCGACGGCGGCGCCGAGGTCGCGTGTAACCTGCTCGACCCGGGGAGCGTGGGCGCCGAGGAGGTGCAGGGCA
TGGTGGAGCGGCTCGCGGGTGAGGAAGGCCTCGCCGTCGGCGAGGGGTACTTCACGGATTTCTCCCAGGAGAAGATCGTC
GAGCTGTACATGGAGAAGTCGGCTCAGGCCGAGGCTTGA-----------------------------------------
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>chr4A_1_TraesCS4A01G438500
CACACATATTTCCTGCAGGAATTTGACACAGAAACAGCGCATGCTTCTCGAGGAGTTCGAGAAGGAAGAGAAGGGCGAGG
ACGACAAGGACGCGGAAAAGGCAGCTGGCGCATCAGGATAGACGGTCTTAGGAGCCAAGCCGCCCAGCATTTCATGGGCG
TTTTAGCTCATCACACACCACAAGATAGAGTAGGATGCTGCCTGGAATTCA-CAGGTTTAAGTTACATAGTTAGGTTGCA
TGGGATTCGCATCGCAACAAATAGATCCTGGTTTCGAGTTTTTGTAGCTGGAATAATAAAGCTACA-CCTGCCACCTGGC
ATGTACTATTATTGTCGTAAGAGTGTTG----ATGACGGTCGGGGGCATCTTGTATTGTATAATTGAT----CTTGTTAT
GTGTTAGAGACATACTGAACACACGGTGCCACTGTC-TATTCATGTCAGCTGGTCGAAGA-TTTGGCATTGTAAACAATT
TTTCTCGCTGTGCTTTCATTGGGTTTGAGAGTTTGGATTT-GGACAGTTTTTGCTGGGCAGAACGCAAATGCTGGTGTTC
GGCCTTATGGTTCTCTTCTTTTGGAACTTGCTTAGTCTTCTGTAAGATCAATATATTCTGACTT-ATTTTCATGGATATT
GATGCGCCACAAGGATAAGATATGTCATATGTAATTCAAAGTTTTGCCAATTTGCAGTAGCAACTGTGCCTTTTTATATT
CCAATTGAGCAATGTTGAGAT---------------------------------------GAGCAACATGAACAGGCCTT
GCTGTTGCAATCATTGCAATCTCATA---------GATATTGATGCTCGTAACCGGAGGTTCTTGTAATTCAGCG-----
--------AGAACATTTGAGCAATTTTGAGAACAAGTGAACCAAA---GGATGAAGAACCTATTCTGTGGCTGGGACGAT
GGACGCTTGTTCACCTCCCTCGCTGCCCAACTCTGTCCACAGCCTCATCTTCTCCT---TGTACGAGAATAATTTTCGTT
TCCTTTTTGGTTGGTGGTTGCATCT-GGATGCGTA------------GAGGAGGATGCTGAGGCCGATGCTGGCGTGCTG
CAAGCTCTACGTCTCCGAGGGCCGGAGCGCGGCGGCCCTGCGCGCCGTCGAGCAGGCGGCGCGCCGGCACCACCCGGCCG
TCGCCCTCGTCAACACCTTCGTCGACGACGCCTACAACCGGGTCGGCTACACGCTCGTCTCCCGCCTCCCGGACCCCGTC
GCGCCGGCCGCGCCGCTGCGGCGCGCCGTGTTCGGCATGGTCGAGGCCGCGCTCGGGGCCATCGACCTCGGCGCCCACGC
CGGCGCGCACCCGCGGCTCGGCGCCGTCGACCACGTCTGCTTCCACCCCCTCGCCGGGTCCCCCCTCCGTGACGTCGCCG
CGCTCGCCGCCGCCGTGGCCGCCGACATCGGCGACGGGCTCCGAGGTAAACCAGTCTCCTCCGTCTCTCGTTCTTGTTCC
CCTCTACTTGCCACTCCGTGCGGCGTGCTGACGCTCAGATTCGTTTCGTGCGACGGCGGCGTCGGTCCGCAGTGCCGACG
TACCTCTACGGCGCGGCGCACCGGGAGGGCCGGACGCTGGCGGCCATCAGGAGGCAGCTCGGCTACTTCAAGCCCCAGAG
CAGCGCCGAGTGGCACGGGCCGCTCACCGTGACGGCCGACGCGACGGCGCTCCCCGTCGCGCCCGACGCCGGCCCGGACG
CGGCGTCGGCGTCCAAGGGCGTGCTGGTCCTCGGGGCGACGGCGTGGGTGGACAACTACAACGTGCCGGTGCGCACCGCC
GACGTGGAGGCCGTGCGGCGGGTCGCGCGCCGGGTCAGCGAGCGCGGCGGCGGGCTCCGGTCCGTGCAGGCCATGGGGCT
CGCGCACGGCGACGGCGGCGCCGAGGTCGCGTGTAACCTGCTCGACCCGGGGAGCGTGGGCGCCGAGGAGGTGCAGGGCA
TGGTGGAGCGGCTCGCGGGTGAGGAAGGCCTCGCCGTCGGCGAGGGGTACTTCACGGATTTCTCCCAGGAGAAGATCGTC
GAGCTGTACATGGAGAAGTCGGCTCAGGCCGAGGCTTGATTTTATCTCCCCTTTCTTTTCTTTTTTTAGCACAGTGGCAT
TATGGATTTCTTGTTTGTTGAAATGTAATTCTAACCGATCAAGAATAATTAATTATAACATTACTAAACAGTAAAACAGA
GCTAGTTAGGAGCATCCACAGCCATTTAAACTTATTATGCCCATGAAGATACGTGATTCATCTGTCATCCCGCACAACGT
TTCTGCCATCATTTTTTTTTTTGAAACGGACGCAAAAGCTTTGCCTCATCCATTAATTAAGAGAGAAAAGAGTTTGTTAC
AAGTCACACAATACACGGCATGAGATCACTCTCGCAAAATAAGAGACCTTAA-TTTTTTTGCACCGGCGATGACCCAAAG
GTTAGCCTCAGAATCGATGGAGTCAAGCAATGTAGGTGGAGGGGCGCTCTTGTGCTTGAAGACCCTTGCGTTTCGCTCAT
TCCAGATGGTCCACGTAACAAGCATGGTGAGGGACGCCTTGGCTTGGCGGTTTGGCGTGCCATTGTCGCAAGTACTTGCC
CACCAAGCCTCAACCGAGTCGAAGAGGGGCCAACCATTGGTGTCAAGACCGTGAATGTGGTATTTGTCAATGATCAAGGA
CCAAAGCCTTCGTGTGTAGCGGCATTTGAAGAAGAGATGAGACCCACATTCCTGCACTCTCTTGCAAAGAGGGCAGAGAT
CACAGTTGGGCCACCCGCGTTTGGCCAATCTATCGGCGGTCCAAATTCTGTCTTGCAACGCCAGCCAAGCGAAGAACTTG
ACTTTTGAG-GGGGCC--CAAGCCTTCCAAACCATTTTATCCAAAGGTGTGAGAACCATCCCTAGGAATTGTGCCTTGTA
AGCAGATGCCGCCGAGTAGGTCCCACTAGCCGTGTGCTTCCATACAATGTCATCCTCGGTGAGTTCATCAAGTTGGACCT
CGTGCAAAAGCGCCCAAAGAGTGAAGAACTGCGTTATGTGCTCCACGGAGATGTTGGTGGGGGGTTTGATCTTGTGGATC
CAT
>chr7A_1
CACACATATTTCCTGCAGGAATTTGACGCAGAAACAGCGCATGCTTCTTGAGGAGTTCGAGAAGGAAGAGAAGGGCGAGG
ACGACAAGGATGCGGAAAAGGCTGCTGGTGCATCAGGATAGCCGGTCTTAGGAGCCAAGCCGCCCAGCATTTCATGGGCG
GTTTAGCTCATCACACACCACAAGATAGAGTAGGATGCTGCCTGGAATTCA-CAGGTTTAAGTTATATAGTTAGGTTGCA
TGGAATTCGCATGGCAACACATAGATCTTGGTTTCGAGTTATTGTAGCTGGGA-AATAATGCTACACCCTGCTGCCTGGC
ACGTATTCTTCTCCCAAGAGTGAG------GCATGACGGTTGGCGGCATCTTGTATTGTATAATTGAT----CTTGTTAT
GTTTTAGAGACACACTGAACACACGGTGCCACTGTCTTATTCATGTCGCTGGTCAGAAGATTTTGTCATTGGGAACAATT
TTGCTAGCTCTGTTTTCACTGTTTTTGAGAGTTTTGATTTAGGACAGTGTTTGCTGGGCCGAACGCAAATGCTGGTGTTC
GGCCTTATGGTTCTGTTCTTCTGGAACTTGCTTGGTCTTCTGTAAAATCATTTTTTGTTGGCTGCATTTTCATGGATAAG
---------------------ATGTCATGTGTAATTCAAAGTTTTGCCAATTTGCAGTAGTAATTGTGCCTTTTCATATT
GCAATTGAGCAATGTTGAGATGAGCAACATTGTTTCAAAAATAAAAATTTTTGTTGAGATGAGCAACATGAACAGGCCTT
GTTGTTGCAATCGTTGTAATGGCTGCATTCTCATGGATATTAATGCTCCTGACTGCACTTTCTTGTAATTCAGCGA----
-----------------GAGCAATTTTGAGAA--------------------------CCTATTCTGTGGCTGGGACGAT
GGACGCTTGTTCACCTCTCTCGCTGCCCAACTCTGTCCACAGCCTCATCTTCTCCTCCTTGTACGAGAATAATTTTGGTT
TCCTTTTTGGTTGGTGGTTGCATCT-GGATGCGGCGGCCGCGTAGAGGAGGAGGATGCTGAGGCCGATGCTGGCGTGCTG
CAAGCTCTACGTCTCCGAGGGCCGGAGCGCGGCGGCCCTGCGCGCCGTCGAGCAGGCGGCGCGCCGGCACCACCCGGCCG
TAGTCCTCGTCAACACCTTCGCCGACGACGCCTACAACCGGGTCGGCTACACGCTCGTCTCCCGCCTCCCGGACCCCGTC
GCGCCCGCCGCGCCGCTGCGGCGCGCCGTGTTCGGCATGGTCGAGGCCGCGCTCGGGGCCATCGACCTCGGCGCCCACGC
CGGCGCGCACCCGCGGCTCGGCGCCGTCGACCACGTCTGCTTCCACCCCCTCGCCGGGGCCGCCCTCCGCGACGTCGCAG
CGCTCGCCGCCGCCGTGGCCGCTGACATCGGCGACGGGCTCCGAGGTAAACCAGTCTCCTCCGTCTCTCGTTCTTGTTCC
CCTCTGCTTGCCACTCCGTGCGGCGTGCTGATGCTCAGATTCGTTTCTTGCGACGACGGTGTCGGTCCGCAGTGCCGACG
TACCTCTACGGCGCGGCGCACCGGGAGGGCCGGAAGCTGGCGGCCATCAGGAGGCAGCTAGGCTACTTCAAGCCCCAGAG
CAGCGCCGAGTGGCACGGGCCGCTCCCGGTCGCGGCCGACACGACGGCGCTGCCAGTCGCGCCCGACGCCGGCCCGGACG
CGGCGTCGGCGTCCAAGGGCGTGCTGGTGCTCGGGGCGACGGCCTGGGTGGACAACTACAACGTCCCGGTGCGCACCGCC
GACGTGGAGGCCGTGCGGCGGGTCGCGCGCCGGGTCAGCGAGCGCGGCGGCGGGCTCCGGTCCGTGCAGGCGATGGGGCT
CGCGCACGGCGACGGCGGCGCCGAGGTCGCGTGCAACCTGCTCGACCTCGGGAGCGTGGGCGCCGAGGAGGTGCAGGGCA
TGGTGGAGCGGCTCGCGGGTGAGGAAGGGCTCGCCGTCGGCGAGGGGTACTTCACGGATTTCTCCCAGGAGAAGATCGTC
GAGCTCTACATGGAGAAATCAGCTCAGGCTGAGGCTTAATTTAATCTC--------------------------------
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>chr7D_1
CACACATATTTCCTGCAGGAATTTGACGCAGAAACAGCGCATGCTTCTCGAGGAGTTCGAGAAGGAAGAGAAGGGCGAGG
ACGACAAGGACGCGGAAAAGGCAGCTGGCGCATCAGGATAGCCGGTCTTAGGAGCCAAGCCGCCCAGCATTTCATGGGCG
GTTTAGCTCATCACACACCACAAGATAGAGTAGGATGCTGCCTGGAAATTTGCAGGTTTAAGTTATATAGTTAGGTTGCA
TGGAATTCGCATGGCAACACATAGATCTTGGTTTCGAGTTATTGTAGCTGGGA-AATAATGCTACACCCTGCCGCCTGGC
ACGTATTCTTCTCCCAAGAGTGAGGCATGAGCATGACGGTTGGCGGCATCTTGTATTGTATAATTGATTGATCTTGTTAT
GTTTTAGAGACACACTGAACACACGGTGCCACTGTC-TATTCATGTCGCTGGTCGGGACACTTCCGCATTCGAAACAATT
TTGCTCGTTCTGCTTTCAGTGGTTTCAAGAGTTTGGATTT-GGACAGTTTTTGGATGTGGTCAT----------------
--CCTTGTGGTTGTGTCTTTCTGGAACTTGCATGGTTTTCAGCAAACTC-------------------------------
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-------CAATATTTGTAATGGCTGGATTCTCGTGGATATCGATGTTCCTAACTGGAAGTTTTTGTAATTCATATCGACA
CGGCACAAAGAACATTTGAGCAATTTTGAGAACCAAGTTCCTCTGAACGGAGGAAGAATCCATTGTGTGGCTGAGACCTT
GGACGCTTGGTCTCTTCTCTCGCTGCCCAATTCTGTCCACAACCTCATCTTCCTCTCCTTGTACGAGAATTTTCTGTT--
--CTTTTTGGTTGGTGGTTGCATCTTGGATGCGGCGGCTGCGTATAGGAGCAGGATGCTGAGGCCGATGCTGGCGTGCTG
CAAGCTCTACGTCTCCGAGGGCCGGAGCTCGGCCGTCCTGCGCGCGGTCGAGCAGGCGGCGCGCCGGCACCACCCGGCCG
TCGCCCTTGTCAACACCTTCGCCGACGACGCCTACAACCGGGTCGGCTACACGCTCGTCTCCCGCCTCCCGCACCCCGTC
GCGCCGGCCACGCCGCTGCGGCGGGCCGTGTTCGGCATGGTCGAGGCCGCGCTCGGGGCCATCGACCTGGGCGCCCACGC
CGGCGCGCACCCGCGGCTCGGCGCCGTCGACCACGTCTGCTTCCACCCCCTCGCCGGGGCCGCCCTCCGCGACGTCGCCG
CGCTCGCCGCCGCCGTGGCTGCCGACATCGGCGACGGGCTCCAAGGTAAACCAGTCTCCTCTGTTTCTTGTTCTTGTCCC
CCTTTGCTTGCCACTCCGTGCGGCGTGCTGACGTTCAGACC-----CGTGCGGCGACGGGGTCGGTTGGCAGTGCCGACG
TACCTCTACGGCGCGGCGCACCGGGAGGGCCGGACGCTGGCGGCCATCAGGAGGCAGCTGGGCTACTTCAGGCCTCAGAG
CAACGCCGAGTGGCACGGGCCGCTCCCCGTCACGGCCGAGGCGACGACGCTCCCCGTCGCGCCCGACGCCGGCCCGGACG
CGGCGTCGGCGTCCAAGGGCGTGTTGGTGCTCGGGGCGACGGCCTGGGTGGACAACTACAACGTGCCGGTGCGCACGGCC
GACGTGGAGGCCGTGCGGCGGGTCGCGCGCCGGGTCAGCGAGCGCGGCGGCGGGCTCCGGTCCGTGCAGGCCATGGGGCT
CGCGCACGGCGACGGCGGCGCCGAGGTGGCGTGCAACCTGCTCGACCCGGGGAGCGTGGGCGCCGAGGAGGTGCAGGGCA
TGGTGGAGCGGCTGGCGGGGGAGGAAGGCCTCGCCGTCGGCGAGGGGTACTTCACGGATTTCTCCCAGGAGAAGATCGTC
GAGCTCTACATGGAGAAGTCAGCTCAGGCTGAGGCTTGATTTCATCTCCCCCTTTTGTTTC--TTTTAGCACAGTGGCAT
TATGGATTTCGTGTTTGTTGAGATATAACTCTAACCGATCAAGAATAATTAATTA-------------------------
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>chr5B_2237
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----------ATTGTTTTTTTTGAAACGGAGGCAAAAGATTTGCCTCATCCATTAATTAAGAGAGAAAAGAGTTTGTTAC
AAGTCACTCAATACACGGCATGAGATCACTCTCGCAAAATAAGAGACCCTAATT-TTTTTGCACGGACGATGACCCAAAG
GTTGGCCTCAGTATCGATGGAGTCAAGCAATGTAGGTGGAGGGGCACACTTGTTCTTGAAGACCCTTGCGATTCGCTCAT
TCCAGACGGTCCACGTAACAAGCATGGTGAGGGACGCATTGGCTTGGCGGTTTGGCGTGCCATTGTCGCAAGTACTTGCC
CACCAAGCCTCAACCGAGTCGAAGAGGGGCCAACCATTGGTGTCAAGACCGTGAATGTGGTATTTGTCAATGATCAAGGA
CCAAAGCCTTCGTGTGTAGCAGCA-TTGAAGAAGAGATGAGACCCACATTCCCGCACTCTCTTGCAAAGAGGACAGAGAT
CACAGTTGGGCCACCCGTGTTTGGCCAATCTATCGGCGGTCCAAATTCTGTCTTGCAACGCCAGCCAAGCGAAGAACTTG
ACTTTTGGG-GGGGCC--CAAGCCTTCCAAACCATTTTATCCAAAGGTGTGAGAACCATCCCTAAGAATTGCTCCTTGTA
AGCAGATGCCGCCGAGTAGGTCCCACTAGCCGTATGCTTCCATACAATGTCATCCT-GGTGAGTTCATCAAGTTGGACCT
CATGCAAAAGCGCCCAAAGAGTGAAGAACTGCATGATGTGCTCCGCAGAGATGTTGGTGGGGGGTTTGATCTTGTGGATC
CAT
>chr5B_2238
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-----------TTTTTTTTTTTGAAACGGAGGCAAAAGCTTTGCCTCATCCATTAATTAAGAGAGAAAAGAGTTTGTTAC
AAGTCACTCAATACACGGCATGAGATCACTCTCGCAAAATAAGAGACCCTAATTTTTTTTGCACCGGCGATGACCCAAAG
GTTGGCCTCAGTATCGATGGAGTCAAGCAATGTAGGTGGAGGGGCACACTTGTGCTTGAAGACCCTTGCGTTTCGCTCAT
TCCAGACGGTCCACGTAACAAGCATGGTGAGGGACGCCTTGGCTTGGCGGTTTGGCGTGCCATTGTCGCAAGTACTTGCC
CACCAAGCCTCAACCGAGTCAAAGAGGGGCCAACCATTGGTGTCAAGACCGTGAATGTGGTATTTGTCAATGATCAAGGA
CCAAAGCCTTCGTGTGTAGCGGCATTTGAAGAAGAGATGAGACCCACATTCCTGCACTCTCTTGCAAAGAGGGCAGAGAT
CACAGGTGGGCCACCTGCGTTTGGCCAATCTATCGGCGGTCCAAATTCTGTCTTGCAACGCCAGCCAAGCGAAGAACTTG
ACTTTTGGG-GGGGCC--CAAGCCTTCCAAATCATTTTATCCAAAGGTGTGAGAACCATCCCTAAGAATTGCGCCTTGTA
AGAAGATGCCGCCGAGTAGGTCCCATTAATCGTATGCTTCCATACAATGTCATCCTCGGTGAGTTCATCAAGTTGGACCT
CATGCAAAAGCGCCCATAGAGTGAAGAACTGCGTGATGTGCTCCGCGGAGATGTTGGTGGGGGGTTTGATCTTGTGGATC
CAT
>chr4B_2239
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------------TTTTTTTTTTGAAACGGAGGCAAAAGCTTTGCCTCATCCATTAATTAAGAGAGAAAAGAGTTTGTTAC
AAGTCACACAATACACGGCATGAGATCACTCTCGCAAAATAAGAGACCCTAA-TTTTTTTGCACCGGCGATGACCCAAAG
GTTAGCCTCAGAATCGATGGAGTCAAGCAATGTAGGTGGAGGGGCGCTCTTGTGCTTGAAGACCCTTGCGTTTCGCTCAT
TCCAGACGGTCCACGTAACAAGCATGGTGAGGGACGCCTTGGCTTGGCGGTTTGGCGTGCCATTGTCGCAAGTACTTGCC
CACCAAGCCTCAACCGAGTCGAAGAGGGGCCAACCATTGGTGTCAAGACTGTGAATGTGGTATTTGTCAATGATCAAGGA
CCAAAGCCTTCGTGTGTAGCGGCATTTGAAGAAGAGATGAGACCCACATTCCTGCACTCTCTTGCAAAGAGGGCAGAGAT
TACAGTTGGGCCACCCGCGTTTGGCCAATCTATCGGCGGTCCAAATTCTGTCTTGCAACGCCAGCCAAGCGAAGAACTTG
ACTTTTGAG-GGGGCC--CAAGCCTTCCAAACCATTTTATCCAAAGGTGTGAGAACCATCCCTAGGAATTGCGCCTTGTA
AGCAGATGCCGCTGAGTAGGTCCCACTAGTCGTGTGCTTCCATACAATGTCATCCTCGGTGAGTTCATCAAGTTGGACCT
CGTGCAAAAGCGCCCAAAGAGTGAAGAACTGCGTTATGTGCTCCACGGAGATGTTGGTGGGGGGTTTGATCTTGTGGATC
CAT
>chr3B_2239
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------------TTTTTTTTTTGAAACGGAGGCAAAAGCTTTGCCTCATCCATTAATTAAGAGAGAAAAAAGTTTGTTAC
AAGTCACACAATACACGGCATGAGATCACTCTCGCAAAATAAGAGACCCTAA-TTTTTTTGCACCGGCGATGACCCAAAG
GTTAGCCTCAGAATCGATGTAGTCAAGCAATGTAGGTGGAGGGGCGCTCTTGTGCTTGAAGACCCTTGCGTTTCGCTCAT
TCCAGACGGTCCACGTAACAAGCATGGTGAGGGACGCCTTGGCTTGGCGGTTTGGCGTGCCATTGTCGCAAGTACTTGCC
CACCAAGCCTCAACCGAGTCGAAGAGGGGCCAACCATTGGTGTCAAGACCGTGAATGTGGTATTTGTCAATGATCAAGGA
CCAAAGCCTTCGTGTGTAGCGGCATTTGAAGAAGAGATGAGACCCACATTCCTGCACTCTCTTGCAAAGAGGGCAGAGAT
CACAATTGGGCCACCCGCGTTTGGCCAATCTATCGGCGGTCCAAATTCTGTCTTGCAACGCCAGCCAAGCGAAGAACTTG
ACTTTTGAG-GGGGCC--CAAGCCTTCCAAACCATTTTATCCAAAGGTGTGAGAACCATCCCTAGGAATTGCGCCTTGTA
AGCAGATGCCGCCGAGTAGGTCCCACTAGTCGTGTGCTTCCATACAATGTCATCCTCGGTGAGTTCATCAAGTTGGACCT
CGTGCAAAAGCGCCCAAAGAGTGAAGAACTGCGTTATGTGCTCCACGGAGATGTTGGTGGGGGGTTTGATCTTGTGGATC
CAT
>chr2B_2240
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-------------TTTTTTTTTGAAACGGAGGCAAAAGCTTTGCCTCATCCATTAATTAAGAGAGAAAAGAGTTTGTTAC
AAGTCACTCAATACACGGCATGAGATCACTCTCGCAAAATAAGAGACCC--ATTTTTTTTGCACCGGCGATGACCCAAAG
GTTGGCCTCAGAATCGATGGAGTCAAGCAATGTAGGTAGAGATGCGCTCTTGTGCTTGAAGACCCTTGTGTTTCGCTCAT
TCCAGACGGTCCACGTAACAAGCATGGTGAGGGACGCCTTGGCTTGGCGGTTTGGCGTGCTATTGTCGCAAGTACTTGCC
CACCAAGCCTCAACCGAGTCAAAGAGGGGCCAACCATTGGTGTCAAGACCGTGAATGTGGTATTTTTCAATGATCAAGGA
CCAAAGCCTTCGTGTGTAGCGGCATTTGAAGAAGAGATGAGACCCACATTCCTGCACTCTCTTGCAAAGAGGGCAGAGAT
CACAGTTGGGCCACCCGCATTTGGCCAATCTATCGGCGGTCCAAATTCTGTCTTGCAACGCCAGCCAAGCGAAGAACTTG
ACTTTTGGGGGGGGGGGGCAAGCCTTCCAAACCATTTTATCCAAAGGTGTGAGAACCATCCCTAGGAATTGCGCCTTGTA
AGCAGATGCCGCTGAGTAGGTCCCACTAGCCGTATGCTTCCATACAATGTCATCCTCGGTGAGTTCATCAAGTTGGACCT
CATGCAAAAGCGCCCAAAGAGTGAAGAACTGCGTTATGTGCTCCGCGGAGATGTTGGTGGGGGGTTTGATCTTGTGTATC
CAT
>chr2D_2241
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--------------TTTTTTTTGAAACGGAGGCAAAAGCTTTGCCTCATCCATTAATTAAGAGAGAAAAGAGTTTGTTAC
AAGTCACTCAATACACGGCATGAGATCACTCTCGCAAAATAAGAGACCCTAA-TTTTTTTGCATTGGCGATAACCCAAAG
GTTGGCCTCAGTATCGATGGAGTCAAGCAATGTAGGTGGAGGGGCGCTCTTGTGCTTGAAGACCCTTGCGTTTCGCTCAT
TCTAGACGGTCCACGTAACAAGCATGGTGAGGGACGCCTTGGCTTGGCGGTTTGGTGTGCCATTGTCGCAAGTACTTGCC
CACCAAGCCTCAACCGAGTCGAAGAGGGGCCAACCGTTGGTGTCAAGACCGTGAATGTGGTATTTGTCAATGATCAAGGA
CCAAAGCCTTCGTGTGTAGCGGCATTTGAAGAAGAGATGAGACCCACATTCCTGCACTCCCTTGCAAAGAGGGCAGAGAT
CACAGTTGGGCCACCCGCATTTGGCCAATCTATCGGCGGTCCAAATTCTGTCTTGCAACGCCAGCCAAGCGAAGAACTTG
ACTTTTGGG-GGGGGGGGCAAGCCTTCCAAACCATTTTATCCAAAGGTGTAAGAACCATCCCTAAGAATTGCGCCTTGTA
AGCAGATGCCGCCGAGTAGGTCCCACTAGCCGTATGCTTCCATACAATGTCATCCTCGGTGAGTTCATCAAGTTGGACCT
CATGCAAAAGCGCCCAAAGAGTGAAGAACTACGTGATGTGCTCCGTGGAGATGTTGGTGGGGGGTTTGATCGTGTGGATC
CAT
>chrUn_2241
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--------------TTTTTTTTGAAACGGAGGCAAAAGCTTTGCCTCATCCATTAGTTAAGAGAGAAAAGAGTTTGTTAC
AAGTCACTCAATACACGGCATGAGATCACTCTCGCAAA-TAAGAGACCCTAA-TTTTTTTGCACCGGCGATGACCCAAAG
GTTGGCCTCAGTATCGATGGAGTCAAGCAATGTAGGTGGAGGGGCACACTTGTGCTTGAAGACCCTTGCGTTTCGCTCAT
TCCAGACGGTCCACGTAACAAGCATGGTGAGGGACGCCTTGGCTTGGCGGTTTGGCGTGTCATTGTCACAAGTACTTGCC
CACCAAGCCTCAACCGAGTCGAAGAGGGGCCAACCATTGGTGTCAAGACCGTGAATGTGGTATTTGTCAATGATCAAGGA
CCAAAGCCTTCGTGTGTAGCAGCATTTGAAGAAGAGATGAGACCCACATTCCTGCACTCTCTTGCAAAGAGGGCAGAGAT
CACAGTTGGGCCACCCGCGTTTGGCCAATCTATCGGCGGTCCAAATTCTGTCTTGCAACGCCAGCCAAGCGAAGAACTTG
ACTTTTGGG-GGGGCC--CAAGCCTTCCAAACCATTTTATCCAAAGGTGTGAGAACCATCCCTAAGAATTGCGCCTTGTA
AGCAGATGCCGCCGAGTAGGTCCCACTAGCCGTATGCTTCCATACAAT--------------------------------
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>chr5A_2242
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---------------TTTTTTTGAAACAGACGCAAAAGCTTTGCCTCATCCATTAATTAAGAGAGAAAAGAGTTTGTTAC
AAGTCACACAATACACGGCATGAGATCACTCTCGCAAAATAAGAGACCCTAA-TTTTTTTGCACCGGCGATGACCCAAAG
GTTAGCCTCAGAATCGATGGAGTCAAGCAATGTAGGTGGAGGGGCGCTCTTGTGCTTGAAGACCCTTGCGTTTCGCTCAT
TCCAGACGGTCCACGTAACAAGCATGGTGAGGGACGCCTTGGCTTGGCGGTTTGGCGTGCCATTGTCGCAAGTACTTGCC
CACCAAGCCTCAACCGAGTCGAAGAGGGGCCAACCATTGGTGTCAAGACCGTGAATGTGGTATTTGTCAATGATCAAGGA
CCAAAGCCTTCGTGTGTAGCGGCATTTGAAGAAGAGATGAGACCCACATTCCTGCACTCTCTTGCAAAGAGGGCAGAGAT
CACAGTTGGGCCACCCGCGTTTGGCCAATCTATCGGCGATCCAAATTCTGTCTTGCAACGCCAGCCAAGCGAAGAACTTG
ACTTTTGAG-GGGGCC--CAAGCCTTCCAAACCATTTTATCCAAAGGTGTGAGAACCATCCCTAGGAATTGTGCCTTGTA
AGCAGATGCCGCCGAGTAGGTCCCACTAGCCGTGTGCTTCCATACAATGTCATCCTCGGTGAGTTCATCAAGTTGGACCT
CGTGCAAAAGCGCCCAAAGAGTGAAGAACTGTGTTATGTGCTCCACGGAGATGTTGGTGGGGGGTTTGATCTTGTGGATC
CAT
>chr6B_2242
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---------------TTTTTTTGAAACGGAGGCAAAAGCTTTGGCTCATCCATTAATTAAGAGGGAAAAGAGTTTGTTAC
AAGTCACACAATACACGGCATGAGATCACTCTCGCAAAATAAGAGACCCTAA-TTTTTTTGCACCGGCGATGACCCAAAG
GTTAGCCTCAGAATCGATGGAGTCAAGCAATGTAGGTGGAGGGGCGCTCTTGTGCTTGAAGACCCTTGCGTTTCGCTCAT
TCCAGACGGTCCACGTAACAAGCATGGCGAGGGACGCCTTGGCTTGGCGGTTTGGCGTGCCATTGTTGCAAGTACTTGCC
CACCAAGCCTCAACCGAGTCGAAGAGGGGCCAACCATTGGTGTCAAGACCGTGAATGTGGTATTTGTCAATGATCAAGGA
CCAAATCCTTCGTGTGTAGCGGCATTTGAAGAAGAGATGAGACCCACATTCCTGCACTCTCTTGCAAAGAGGGCAGAGAT
CACAGTTGGGCCACCCGCGTTTGGCCAATCTATCGGCGGTCCAAATTCTGTCTTGCAACGCCAGCCAAGCGAAGAACTTG
ACTTTTGAG-GGGGCC--CAAGCCTTCCAAACCATTTTATCCAAAGGTGTGAGAACCATCCCTAGGAATTGCGCCTTGTA
AGCAGATGCCGCCGAGTAGGTCCCACTAGCCGTGTGCTTCCATACAATGTCATCCTCGGTGAGTTCATCAAGTTGGACCT
CGTGCAAAAGCGCCCAAAGAGTGAAGAACTGCGTTATGTGCTCCACGGAGATGTTGGTGGGGGGTTTGATCTTGTGGATC
CAT
>SNPs
---------------------------S----------------------------------------------------
-----------------------------------------S--------------------------------------
S----------------------------------------------------------------S--------------
---S--------S------S-------S------------S----------S-S-----S-------------S------
-S---S-S--S-SSSSSS-SSSSS-SSS------------S--S------------------------------------
--S---------S----------------------------------SSSS-SSS----------------S--------
--S------S--------S---S------------------------------------S--------------------
--------------S-----S------------S-----------S----S-S-S-SS--S--S--------------SS
SSSSSSSSSSSSSSSSSSSSS-------S-------------------------------S--S----------S-----
S-------------------------------------------------------------------------------
-S----------S---S---SS-SSS----------------------S----S---S----------------------
---------------------------------S-SSSSS-SSSS------S----------------------------
-----------------S----------------------------------------------------------S---
---------------------------------SS---------------------------------------------
--------------------------------------------------------------------------------
---------------------S----------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------------S--S-------S----------
--------------------------------------------------------------------------------
-----S-------------------------------------------------S---S--------------------
-----------------------------------------------------------S--------------------
-------------------------S----S-------------------------------------------------
----------------------------S--------------S------------------------------------
--------------------------------------------------------------------------------
---------------------------------S----------------------------------------------
--------------------------------------------------------------------------------
-----S--------------S--------S------------S--------S--S-S--SSSS-----------------
----------S----------S--S---S--------------------------SSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSS----------------------------------------------------------------------
------------------------------------------------S-------------------------------
--------------------------------------------------------------------------------
------S-------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---
>forward_253
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------------------GGTTGCA
TGGGATTCGCATC-------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---
>reverse_2306
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------------------CATCCCGCACAACGT
TTCTG---------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---
