>input_sequence_62839
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----------------------------------------ATGGGTTCCTTATTCTCTTCCCCAGCCGCCGG--------
--CGGCGGCGACGGCGGCTACGATTACGCCAACGCTCTCCGGGACTCCGACGAGTACATCGGCCGCTCCATTGAGAAAAA
AGAGTATGTAATT----------------------TTCTTACAAAATTTGCTTAACTGCTTGCATGGGATCTATTCTTAT
ATTCTTGCTATATGAGATTCATTCCCTGGATGAACGTCTGATTGTTGCCCTGAATAACCATTCCATCCATTATGTTTATT
CTTTTAGAAAAGGATTATGTTTATTTATTTGGTGTACCCTTGTTTATTTGGCAA-CAGAGAG-----------GACATCC
CCTTCCGAACTTGTACGCTTGTCGACATCGCCCTCCATCATTACAACTCCAACAACCCGGTATGATAC--------TCTC
TCTCTCTCTCTTTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCT------------------CATACATCCAGGCGA
GTGCTTAATACTTATGATTGAGAATTTAAGATCGATCGCTGCGATGCAGGGTGCCAAGTTCGAGTATCCTGAGTATCCTC
CTCAGTCGACATCGGAGATGAAGGCCGCCTGCGTCGGTTTCAGAGGAACTTTCTGGTACCACCTCAGCTTTT-CGGCTCG
CCCGATGGATGCCACCGCCGAGAAGCAGCACTTCTTCGCCGAGCTATATTATCATAGACAGTTCCGCCAACTAGCTGTTC
AGACATGCACCATCTTAGGTACTACCTAAATTTACCTTTACATTCTGACGT-----------------------A-----
-CTATGTTTGCTAGCCACTTACGTATATGCATATTATTA-TGCCATTTGCAGCTAATTCTCTCTCTATCTCTCTCTATAA
TG-TCAACAGGAAAGCCGTTGTGCCGCTTTAGCAGGTCATGTGCATTTTGTCCAGAGGAATCCAATATCTTGCACCCAAG
CGATGCAGAATTTGTGTGTGGAAAGCCTGATCACAAAAAAGAGTTCTTCCGCAAGAGAGATATGCTAGTGCGGCCATACA
ATTCTTTTATGATACCTCCTGATATAGATAACAGCGATGATCCATGA---------------------------------
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>chr2D_1_TraesCS2D01G593500
AGCTCGCTTCCGACCAATTCAAGAAGAATTAGCAGGATTTTTCATGAGGGAAGTCATCAATCCTAAAGGAGAACACTATA
CCGAGGACGAAGAAATTTATATGCATACCCGAGATTGAAACTTGTTCGAAGTTGTATATGGTCATCCATCCTAATTGTGT
ATGGAAACTTGTTCGAAGTTGTATATGGTCACCCGAGATTGAATATATATTATATATTCCTCTTGAATTCTTCTTGTTTG
AAATTTCATATGCATGTATATAGTAGCGTAGAATATGTGTACTGAAACTTCATCAAAATTAAAATAAAACACAAAATAAA
ATATAAAAGAAATAAAACACTCCAAATTAAAAAGAAACCAGGTTTAGGGGGGCTAAAACCCTAAACCTACGGAGGAGGCC
TTTAGTCCCGGTTGGCCACGAGAACCGGGACTAAAGGTCCTCCGCCCCGACGGACCACGGGCGCCCACGTGGACGGGCCT
TTAGTCCCGGTCAGCCACAAGAACCGGGACTAAAGCCTTTAGTCGCGGTCCGTAAGAGGCGCGACTAAAGGGGGGGTCTT
TAGTCGCGCATATTTAGTCCCGGTTGCACAGCCGGGACTAAAGGCTGTTGCGAACCGGGACTAAAGGGCTTTTTTCTACC
AGTGACCTCTTTATTTTTTAAACTGCCATGATTGAAGATGAACAGATTGAAGGTTTCTCGAAAAAAAAGACAAGAAAATC
AAGGCACACAATAAACGTAGGCTATTGGAGCATAACCACGCTGGACACGCGGCCCGCCGACGGCCCAGATCCAAATCCAA
CCAGCCGGGCCTGCCTAGTGCCTACACGAGCAAAGGCAGGTCGTTATTTATCTCCGTCTCCCTTGTCTCAAAAAAAAAGA
AAAATTCTCCGTCTCCCTATCCCGATCGGCTTAGGTAAGCACATACGGGGAAATCTTTGTATTTATACTTTGGCCCGGCC
GCCAAGAGCCACCGGACAAACACTAGAGATCGATTGATCCATGGGTTCCTTATTCTCTTCCCCAGCCGCCGG--------
--CGGCGGCGACGGCGGCTACGATTACGCCAACGCTCTCCGGGACTCCGACGAGTACATCGGCCGCTCCATTGAGAAAAA
AGAGTATGTAATT----------------------TTCTTACAAAATTTGCTTAACTGCTTGCATGGGATCTATTCTTAT
ATTCTTGCTATATGAGATTCATTCCCTGGATGAACGTCTGATTGTTGCCCTGAATAACCATTCCATCCATTATGTTTATT
CTTTTAGAAAAGGATTATGTTTATTTATTTGGTGTACCCTTGTTTATTTGGCAA-CAGAGAG-----------GACATCC
CCTTCCGAACTTGTACGCTTGTCGACATCGCCCTCCATCATTACAACTCCAACAACCCGGTATGATAC--------TCTC
TCTCTCTCTCTTTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCT------------------CATACATCCAGGCGA
GTGCTTAATACTTATGATTGAGAATTTAAGATCGATCGCTGCGATGCAGGGTGCCAAGTTCGAGTATCCTGAGTATCCTC
CTCAGTCGACATCGGAGATGAAGGCCGCCTGCGTCGGTTTCAGAGGAACTTTCTGGTACCACCTCAGCTTTT-CGGCTCG
CCCGATGGATGCCACCGCCGAGAAGCAGCACTTCTTCGCCGAGCTATATTATCATAGACAGTTCCGCCAACTAGCTGTTC
AGACATGCACCATCTTAGGTACTACCTAAATTTACCTTTACATTCTGACGT-----------------------A-----
-CTATGTTTGCTAGCCACTTACGTATATGCATATTATTA-TGCCATTTGCAGCTAATTCTCTCTCTATCTCTCTCTATAA
TG-TCAACAGGAAAGCCGTTGTGCCGCTTTAGCAGGTCATGTGCATTTTGTCCAGAGGAATCCAATATCTTGCACCCAAG
CGATGCAGAATTTGTGTGTGGAAAGCCTGATCACAAAAAAGAGTTCTTCCGCAAGAGAGATATGCTAGTGCGGCCATACA
ATTCTTTTATGATACCTCCTGATATAGATAACAGCGATGATCCATGACTCAACTCTTATGTTATGGCGTATATATTGCAG
TTGTAAGATAACAAC-----------------------------------------------------------TACGAT
TTTTTTCTTGTTTATCATCC-----TTGTTCAATTTTGTCGATCACTAGAAAAATAAAAACTAGTAGTATTTCGAAATTT
AATGTGCACAAGAACGAGTACCATAA------------------------------------------------------
-----------------CTGAGAAGCATGGGTGCAGCTATGAT---------------GCATTTTCTCTCTCTTTTATTT
CAGTGGTGCAATTTTTGTTATATTTCTCTCGGCCGAGGCTCCCAATGGTGATGACTAGCTAGCCTTTTGTGTTGTGGCAG
TGCCATGGAGACGTTATGCTATCCTAATGTGTTTTTCCTACGCTAGAACATATTGATCGAGTTTTTATAAACCTCCCATG
GTATCAACTGTTCCCAAACTCATCCCTCTCATCTCTCACACGATATATCTCCGATAACATACCTCTGTTAATCTCCGTTG
ACACGGTGATTCCACGTCCCGCGCTTCTCCAATTTGAAAACTCCTAGGCCAAAAGGCCGGGCTGCTGAGCAGTAATCCAG
AGCACTTGGGTTTTGGCCCTTCACCGTTCAAACAACGCTCTATTTCTCGTTTCCGTGCTAAATTTTTTGAGAATCCATCT
CAAATGATGACGAAACTATCTATCCCACTGAGTACTAGAGAGAACAATTGTAAGTTTTTCATCAACGTTCCTCATGTGTT
AAAGGAAGACCGACCTCTCTCACGCCCTGAAGTCTTGAAACAGGCTTTCGTCCCCCTTTATAAATAAAGGCACAAACGGC
CAAACTGATACACAGTGTTGAGGAGACCCTCATACAAGCAGGTCGAAAGAAAAATAAAACGGCAGTGATCTAGTGGCACA
CGTACCACTAACCCAACACTGAACAGGAAACCAGGAGACACCATCCCTAACACATAACACCCACTACTACTGGACAAGAC
CGGAGCCAAGCCGCCTGAAGAAACCACCGGTCACCATGGTACCGAACCAACACCAAGCCAACTCCGGAAAGGACCGC
>chr2D_1
AGCTCGCTTCTGACCAATTCAAGAAGAATTAGCAGGATTTTTCATGAGGGAAGTCATCAATCCTAAAGGAGAACACTATA
CCGAGGACGAAGAAATTTATATGCATACCCGAGATTGAAACTTGTTCGAAGTTGTATATGGTCATCCATCCTAATTGTGT
ATGGAAACTTGTTCGAAGTTGTATATGGTCACCCGAGATTGAATATATATTATATATTCCTCTTGAATTCTTCTTGTTTG
AAATTTCATATGCATGTATATAGTAGCGTAGAATATGTGTACTGAAACTTCATCAAAATTAAAATAAAACACAAAATAAA
ATATAAAAGAAATAAAACACTCCAAACTAAAAAGAAACCAGGTTTAGGGGGGCTAAAACCCTAAACCTGCGGAGGAGGCC
TTTAGTCCCGGTTGGCCACGAGAACCGGGACTAAAGGTCCTCCGCCCCGACGGACCACTGGCGCCCACGTGGACGGGCCT
TTAGTCCCGGTCAGCCACAAGAACCAGGACTAAAGCCTTTAGTCGCGGTCCGTAAGAGGCGCGACTAAAGGGGGGGTCTT
TAGTCGCGCATATTTAGTCCCGGTTGCACAGCCGGGACTAAAGGCTGTTGCGAACCGGGACTAAAGGGCTTTTTTCTACC
AGTGA---------------------------------------------------------------------------
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>chr2D_1
AGCTCGCTTCCGACCAATTCAAGAAGAATTAGCAGGATTTTTCATGAGGGAAGTCATCAATCCTAAAGGAGAACACTATA
CCGAGGACGAAGAAATTTATATGCATACCCGAGATTGAAACTTGTTCGAAGTTGTATATGGTCATCCATCCTAATTGTGT
ATGGAAACTTGTTCGAAGTTGTATATGGTCACCCGAGATTGAATATATATTATATATTCCTCTTGAATTCTTCTTGTTTG
AAATTTCATATGCATGTATATAGTAGCGTAGAATATGTGTACTGAAACTTCATCAAAATTAAAATAAAACACAAAATAAA
ATATAAAAGAAATAAAACACTCCAAATTAAAAAGAAACCAGGTTTAGGGGGGCTAAAACCCTAAACCTGCGGAGGAGGCC
TTTAGTCCCGGTTGGCCACGAGAACCAGGACTAAAGGTCCTCCGCCCCGACGGACCACTGGCGCCCACGTGGACGGGCCT
TTAGTCCCGGTCAGCCACAAGAACCAGGACTAAAGCCTTTAGTCGCGGTCCGTAAGAGGCGTGACTAAAGGGGGGGTCTT
TAGTCGCGCATATTTAGTCCCGGTTGCACAGCCGGGACTAAAGGCTGTTGCGAACCGGGACTAAAGGGCTTTTTTCTACC
AGTG----------------------------------------------------------------------------
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>chr6D_1
AGCTCGCTTCCGACCAATTCAAGAAGAATTAGCAGGATTTTTCATGAGGGAAGTCATCAATCCTAAAGGAGAACACTATA
CCGAGGACGAAGAAATTTATATGCATACCCGAGATTGAAACTTGTTCGAAGTTGTATATGGTCATCCATCCTAATTGTGT
ATGGAAACTTGTTCGAAGTTGTATATGGTCACCCGAGATTGAATATATATTATATATTCCTCTTGAATTCTTCTTGTTTG
AAATTTCATATGCATGTATATAGTAGCGTAGAATATGTGTACTGAAACTTCATCAAAATTAAAATAAAACACAAAATAAA
ATATAAAAGAAATAAAACACTCCAAATTAAAAAGAAACCAGGTTTAGGGGGGCTAAAACCCTAAACCTGCGGAGCAGGCC
TTTAGTCCCGGTTGGCCACGAGAACCGGGACTAAAGGTCCTCCGCCCCGACGGACCACGGGCGCCCACGTGGACGGGCCT
TTAGTCCCGGTCAGCCACAAGAACCGGGACTAAAGCCTTTAGTCGCGGTCCGTAAGAGGCGCGACTAAAGGGGGGGTCTT
TAATCGCGCATATTTAGTCCCGGTTGCACAGCCGGGACTAAAGGCTGTTGCGAACCAGGACTAAAGGGCTTTTTTCTACC
AGTGA---------------------------------------------------------------------------
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>chr6D_1
AGCTCGCTTCCGACCAATTCAAGAAGAATTAGCAGGATTTTTCATGAGGGAAGTCATCAATCCTAAAGGAGAACACTATA
CCGAGGACGAAGAAATTTTTATGCATACCCGAGATTGAAACTTGTTCGAAGTTGTATATGGTCATCCATCCTAATTGTGT
ATGGAAACTTGTTCGAAGTTGTATATGGTCACCCGAGATTGAATATATATTATATATTCCTCTTGAATTCTTCTTGTTTG
AAATTTCATATGCATGTATATAGTAGCGTAGAATATGTGTACTGAAACTTTATCAAAATTAAAATAAAACACAAAATAAA
ATATAAAAGAAATAAAACACTCCAAACTAAAAAGAAACCAGGTTTAGGGGGGCTAAAACCCTAAACCTGCGGAGGAGGCC
TTTAGTCCCGGTTGGCCACGAGAACCGGGACTAAAGGTCCTCCGCCCCGACGGACCACTGGCGCCCACGTGGACGGGCCT
TTAGTCCCGGTCAGCCACAAGAACCGGGACTAAAGCCTTTAGTCGCGGTCCGTAAGAGGCGCGACTAAAGGGGGGGTCTT
TAGTCGCGCATATTTAGTCCCGGTTGCACAGCCGGGACTAAAGGCTGTTGCGAACCGGGACTAAAGGGCTTTTTTCTACC
AGTGA---------------------------------------------------------------------------
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>chr6D_1
AGCTCGCTTCCGACCAATTCAAGAAGAATTAGCAGGATTTTTCATGAGGGAAGTCATCAATCCTAAAGGAGAACACTATA
CCGAGGACGAAGAAATTTATATGCATACCCGAGATTGAAACTTGTTCGAAGTTGTATATGGTCATCCATCCTAATTGTGT
ATGGAAACTTGTTCGAAGTTGTATATGGTCACCCGAGATTGAATATATATTATATATTCCTCTTGAATTCTTCTTGTTCG
AAATTTCATATGCATGTATATAGTAGCGTAGAATATGTGTACTGAAACTTCATCAAAATTAAAATAAAACACAAAATAAA
ATATAAAAGAAATAAAACACTCCAAACTAAAAAGAAACCAGGTTTAGGGGGGCTAAAACCCTAAACCTGCGGAGGAGGCC
TTTAGTCCCGGTTGGCCACGAGAACCAGGACTAAAGGTCCTCCGCCCCGACGGACCACTGGCGCCCACGTGGACGGGCCT
TTAGTCCCGGTCAGCCACAAGAACCGGGACTAAAGCCTTTAGTCGCGGTCCGTAAGAGGCGCGACTAAAGGGGGGGTCTT
TAGTCGCGCATATTTAGTCCCGGTTGCACAGCCGGGACTAAAGGCTGTTGCGAACCGGGACTAAAGGGCTTTTTTCTACC
AGTGA---------------------------------------------------------------------------
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>chr3D_1
AGCTCGCTTCCGACCAATTCAAGAAGAATTAGCAGGATTTTTCATGAGGGAAGTCATCAATCCTAAAGGAGAACACTATA
CCGAGGACGAAGAAATTTATATGCATACCCGAGATTGAAACTTGTTCGAAGTTGTATATGGTCATCCATCCTAATTGTGT
ATGGAAACTTGTTCGAAGTTGTATATGGTCACCCGAGATTGAATATATATTATATATTCCTCTTGAATTCTTCTTGTTTG
AAATTTCATATGCATGTATATAGTAGCGTAGAATATGTGTATTGAAACTTCATCAAAATTAAAATAAAACACAAAATAAA
ATATAAAAGAAATAAAACACTCCAAACTAAAAAGAAACCAGGTTTAGGGGGGCTAAAACCCTAAACCTGCGGAGGAGGCC
TTTAGTCCCGGTTGGCCACGAGAACCGGGACTAAAGGTCCTCCGCCCCGACGGACCACTGGCGCCCACGTGGACGGGCCT
TTAGTCCCGGTCAGCCACAAGAACCGGGACTAAAGCCTTTAGTCGCGGTCCGTAAGAGGCGCGACTAAAGGGGGGGTCTT
TAGTCGCGCATATTTAGTCCCGGTTGCACAGCCGGGACTAAAGGCTGTTGCAAACCGGGACTAAAGGGCTTTTTTCTACC
AGTGA---------------------------------------------------------------------------
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>chr3D_1
AGCTCGCTTCCGACCAATTCAAGAAGAATTAGCAGGATTTTTCATGAGGGAAGTCATCAATCCTAAAGGAGAACACTATA
CCGAGGACGAAGAAATTTATATGCATACCCGAGATTGAAACTTGTTCGAAGTTGTATATGGTCATCCATCCTAATTGTGT
ATGGAAACTTGTTCGAAGTTGTATATGGTCACCCGAGATTGAATATATATTATATATTCCTCTTGAATTCTTCTTGTTTG
AAATTTCATATGCATGTATATAGTAGCGTAGAATATGTGTACTGAAACTTCATCAAAATTAAAATAAAACACAAAATAAA
ATATAAAAGAAATAAAACACTCCAAATTAAAAATAAACCAGGTTTAGGGGGGCTAAAACCCTAAACCTGCGGAGGAGGCC
TTTAGTCCCGGTTGGCCACGAGAACCGGGACTAAAGGTCCTCCGCCCCGACGGACCACGGGCGCCCACGTGGACGGGCCT
TTAGTCCCGGTCAGCCACAAGAACCGGGACTAAAGCCTTTAGTCACGGTCCGTAAGAGGCGCGACTAAAGGGGG-GTCTT
TAGTCGCGCATATTTAGTCCCGGTTGCACAGCCGGGACTAAAGGCTGTTGCGAACCGGGACTAAAGGGCTTTTTTCTATC
AGTGA---------------------------------------------------------------------------
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>chr1D_1
AGCTCGCTTCCGACCAATTCAAGAAGAATTAGCAGGATTTTTCATGAGGGAAGTCATCAATCCTAAAGGAGAACACTATA
CCGAGGACGAAGAAATTTATATGCATACCCGAGATTGAAACTTGTTCAAAGTTGTATATGGTCATCCATCCTAATTGTGT
ATGGAAACTTGTTCGAAGTTGTATATGGTCACCCGAGATTGAATATATATTATATATTCCTCTTGAATTCTTCTTGTTTG
AAATTTCATATGCATGTATATAGTAGCGTAGAATATGTGTACTGAAACTTCATCAAAATTAAAATAAAACACAAAATAAA
ATATAAAAGAAATAAAACACTCCAAACTAAAAAGAAACCAGGTTTAGGGGGGCTAAAACCCTAAACCTGCGGAGGAGGCC
TTTAGTCCCGGTTGGCCACGAGAACCGGGACTAAAGGTCCTCCGCCCCGACGGACCACTGGCACCCACGTGGACGGGCCT
TTAGTCCCGGTCAGCCACAAGAACCGGGACTAAAGCCTTTAGTCGCGGTCCGTAAGAGGCGCGACTAAAGGGGGGGTCTT
TAGTCGCGCATATTTAGTCCCGGTTGCACAGCCGGGACTAAAGGCTGTTGCGAACCGGGACTAAAGGGCTTTTTTCTACC
AGTG----------------------------------------------------------------------------
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>chr5D_1
AGCTCCCTTCCGACCAATTCAAGAAGAATTAGCAGGATTTTTCATGAGGGAAGTCATCAATCCTAAAGGAGAACACTATA
CCGAGGACGAAGAAATTTATATGCATACCCGAGATTGAAACTTGTTCGAAGTTGTATATGGTCATCCATCCTAATTGTGT
ATGGAAACTTGTTCGAAGTTGTATATGGTCACCCGAGATTGAATATATATTATATATTCCTCTTGAATTCTTCTTGTTTG
AAATTTCATATGCATGTATATAGTAGCGTAGAATATGTGTACTGAAACTTCATCAAAATTAAAATAAAACACAAAATAAA
ATATAAAAGAAATAAAACACTCCAAATTAAAAAGAAACCAGGTTTAGGGGGGCTAAAACCCTAAACCTGCGGAGGAGGCC
TTTAGTCCCGGTTGGCCACGAGAACCGGGACTAAAGGTCCTCGGCCCCGACGGACCACGGGCGCCCACGTGGACGGGCCT
TTAGTCCCGGTCAGCCACAAGAACCGGGACTAAAGCCTTTAGTCGCGGTCCGTAAGAGGCGCGACTAAA-GGGGGGTCTT
TAGTCGCGCATATTTAGTCCCGGTTGCACAGCCGGGACTAAAGGCTGTTGCGAACCGGGACTAAAGGGTTTTTTTCTACC
AGTG----------------------------------------------------------------------------
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>chrUn_730
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---------AATAAACGTAGGCTATTGGAGCATAACCACGCTGGACACGCGGCCTGCCGACGGCCCAGATCCAAATCCAA
GCAGCCGG-CCTGCCTACTGCCTTGAGATCCAAAGGCAGGT---TATTTATCTCCGTCTCCCTTGTCTCAAAAAAAAAAA
AAAA--CTCCGTCTCCCTATCCCGATCGGCTTAGGTAACCACATACGGGGAAATCTTTCTATTTATACTTTGGCCCGGCC
GCCAAGAGCCACCGGACAAACACTAGAGATTGATTGATCCATGGGTTCCTTATTCTCTTCCCCAGCCGCCGAGCCGCCGC
GCCGGCGGCGACGGCGGCTACGATTACGCCAACGCTCTCCGGGACTCCGACGAGTACATCGGCCGCTCCATTGCGAAAAA
AGAGTATGTAATTCCTAGCTTCGTACTGGACAATTTTCTTACAAAATTTGCTTAACTGCTTGCATGGGATCTATTCTTAT
ATTCTTGCTATATGAGATTCATTCCCTGGATGAACGTCTGA---TTGCCCTGAATAACCATTCCAACCATTATGTTTATT
ATTTTAGAAAATGATTATGTTTATTTATTTGGTGTACCCTTGTTTATTTGGCGAACAACCTGGTATTGCCCTTGACATCG
CCTTCCGAACTTCTACGCTGGTCGACATCGCCCTCCATCATTACAACTCCAACAACCCGGTATGATAC--------TCTC
TCTCTCTCTCTCTCTCTCTC----------------TCTCTCTCTCT------------------CATACATCCAGGCGA
GTGCTTAATACTTATGATTGAGAATTTGAGATCGATCGCTGCGATGCAGGGTGCCAAGTTCGAGTATCCTGAGTATCCTC
CCCAGTCGACATCGGAGATGAAGGCAGCCTGCATCGGTTTCAGAGGAACTTTCTGGTACCACCTCAGCTTTTTCGGCTTG
CCCGATGGATGCCACCGCCGAGAAGCAGCACTTCTTTGCCGAGCTATATTATCATAGACAGTTCCGCCAACTAGCCGTTC
AAACATGCACCATCTTAGGTACTACCTAAATTTACCTTTACATTGGGACGT-----------------------A-----
-CTATGTTTGCTAGCCACTTAAGTATAGGCATGTTATT-ATGCAACTTGCAGCTAATTCTC----------TCTCTATAA
TG-TCAACAGAAAAGCCGTTGTGCCGCTTTAGCAGCTCATGTGCATTTTGTCCAGAGGAATCCAATATCTTGCACCCAAG
CGATGAAGAATTTGTGTGTGGAAAGCCAGATCACAAAAAAGAATTCTTCCGCAAGAAAGATATGCTAGTGCGGCCATTCA
ATTCTTTTATGATACCTCCTGATATAGATAACAGCGATGATCCATGACTCGACTCTTATGTTAA----------------
----AAGATAGCAAC-----------------------------------------------------------AACAAT
TTTCTACTTGCTTATCATCC-----TTGTACAATTTTGTCGATCACTAGAAAAATAAAAACTAG---TATTTCGAAATTT
AATGTGCACAAGAACGAGTACCATAAATGAGAAGCATGGTTTTTTTTTAAGAAAAAGAGGATCACCCTCAGCCTCTGCAT
CGGAACGAGTACCATAACTAAGAAGCATGGGTACAACTATAATGCATACGATCCACCAGCATTTTCTCTCTCTTTTATTT
CAGTGGTGCAATTTCTGTTATATTTCACTCGACCGAGGCTCCCAATGGTAATGACCAGCTAGCCTTTTGTGTCGTGGCAA
TGCCATGGAGACGTTAGGCTATCCTAGTGTGTTTTTCCAACACTAGAAAATATTGATCGAGTTTTTATAAAGCTCCCATG
GTATCAACTGTTCCCAAACTCATCCCTCTCATCTCTCATACGATATACCTCCGATCACATACCTCTGTTAATCTCCGTTG
ACACGGTGATTCCACGTCCCGCACTTCTCCAATTTGAAAACTCCTGGGCCAAAAGGCCGGGCTGCTGAGCAGCAATCCAG
TGCACTTGGGCTTTGGCCCTTCAGCGTTCAAACAACGCTCTATCTCTCGCTTCCGTGCTAAATTTTTTGAGAACCCATCT
CAAATGATGACGAAACTATCTATCACACTGAGCACTGGAGAGAACACTTGTAAGTTTTTCATCAACATTCTTGATGTGTT
AGAGGAAGACCAGCCTCTCTCACACCCTGTACTCTTGAAACAAGCTTTCG-CCCCCTTTATAATAAAGGCACG-AACGGC
CAAACTGATACATAGTGGTGAGGAGACCCTCAT-----------------------------------------------
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>chrUn_1262
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-------------ATTATGTTTATTTATTTGGTGTACCCTTGTTTATTTGGAGA-CAGAGAT-----------ACCGTCG
CCTTCCGAATTTCTCAGCTTGTCGACGTCGCCCTTGAACATTACAACTCCAACAACCCAGTATGATAC--------TCTC
TCCG--------------------------------TCTCTCCCTCT------------------CATACATCCAGGCGA
GTACTTAATACTTATGATTGAGAGTTTGAGATCGATCGCTGAGATGCAGGGTGCCGAGTTCGAGTATCCTGAGTATCCTC
CC------ACCACGGAGATGAACGCCGTCTGCGTCGGTTTTAGGGGAACTTTCTGGTACCACCTCGGCTTTT-CGGCTCG
CCCAGTGGACACCACCGCCGAGACGCAACACTTCTTTGCCGAGCTATATTTTGATAGACGCTGGTGCCAAATAGCCGTTG
AAACATGCACTATCTTAGGTACTACCTAAATTTATCTTTACATTCGGCCAT-----------------------A-----
-CTGTGTTTGCTAGCCACTTGAGTATATCCATATCCTTAATGTAACTTGCAGCTAATTCTGTCTTTATCTTTCTCTGTAA
TG-TCAACAGAAAAGCCGTTGTGCCGCTTTAGAGCCTCGTGTGCATTTTGTCCAGATGAATCCAATATCTTGCACCCAAG
CAGTGCAGATTTTTTCTGTGGAAAACAAGATCACGAAAAAGAATTCTTTCGCAAGAGAGATATGCTAGTGCGGCCATTCA
ATTCTTTTATGACACCTCCTGATATAGATAGCACCGACGATCCATGACTAAACTCATATGTTATGGCCTATGGATTATAG
TTGTAAAATAA---------------------------------------------------------------------
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>chrUn_1262
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-------------ATTATGTTTATTTATTTGGTGTACCCTTGTTTATTTGGAGA-TAGAGAT-----------ATCGTCG
CCCACCGAATTTCTCAGCTTGTCGACGTCGCCCTTGAACATTACAACTCCAACAACCCGGTATGGTAC--------TCTC
TCCG--------------------------------TCTCTCCCTCT------------------CATACATCCAGGCGA
GTACTTAATACTTATGATTGAGAGTTTGAGATCGATCGCTGAGATGCAGGGTGCCGAGTTCGAGTATCCGGGGTATCCTC
CC------ACCACGGACATGAACGCCGTCTGCGTCGGTTTTAGGGGAACTTTCTGGTACCACCTCGGCTTTT-CGGCTCG
CCCAGTGGACGCCACCGCCGAGACGCAACACTTCTTTGCCGAGCTATATTTTGATAGACGCTTCTGCCAAATAACCGTTG
AAACATGCACTATCTTAGGTACTACCTAAATTTATCTTTACATTCGGCCAT-----------------------A-----
-CTATGTTTGCTAGCCACTTGAGTATATACATGTCATTAATGTAACTTGCAGCTAATTCTGTCTTTATCTTTCTCTGTAA
TG-TCAACAGAAAAGCCGCTGTGCCGCTTTAGAGCCTCGTGTGCATTTTGTCCAGATGAATCCAATATCTTGCACCCAAG
CAGTGCAGAATTTTTCTATGGAAAACAAGATCACGAAAAAGAATTCTTTCGCAAGAGAGATATGCTAGTGCGGCCATTCA
ATTCTTTTATAACACCTCCTGATATAGATAGCACCGACGATCCATGATTCAACTCATATGTTATGGCCTATGGATTATAG
TTGTAAAATAA---------------------------------------------------------------------
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>chr1D_1262
ATTTG---------------------------------------------------------------------------
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-------------------TTTATTTATTTGGTGTACCCTTGTTTATTTGGGGA-CAGAAAA-----------GACATCG
CCCTCCGAATTTCTAGGCTTGTCGACATCGCCATCGAACATTACAACTCCAACAATCCAGTATGATAC--------ACTC
TCTCTCTCTCCCTCTCTCCC-----------------CTCTTTCTCTCTCGCATATACACACACCCACGCATCTAAGTGA
ATGTTTAATACATATGATTGGGAATTTGAGATCAATCACTGCAATGCAGGGTGCCGAGTTCCAGTATCCTGAGTATCCTC
CCCAGTCGACCACGGAGATGAAGGCTGCCTGCATCGGTTTTAGGGGAACTTTCTGGTACCACCTCGGCTTTT-CGGCTCA
CCCCATGGATGCCACCGCCGAGACGCAACACTTTTTCGCTGAGCTATATTTTGATAGACAGTACCTCGAACTAGCCGTTG
AAACATGCATCATCTTAGGTACTACCTAAATTTAACTTCACATTCCGCCAT-----------------------ACTGTG
TTTGTGTTTGCTATCCACTTGAATATATGCATACTATTAATGCAACTTGCAGCTAATCCTCTCTCTATATTTCTCTATAA
TG-CCAACAGAAAAGCCATTGTGCCGCTTTAGCAGCTCGTGTGCATTTTGTCCGGACGAATCCAATATCTTGCACCCAAG
TGATGAAGAATTTGTTTGTGGAAAGCAAGATCACAAAAAAGAATTCTTCCGCAGGAGAGATATGCTAGTGCGGCCATTCA
GTTCTTTTATGACACCTCCTGATATAGATAACACCG--------------------------------------------
--------------------------------------------------------------------------------
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>chr2B_1262
ATTTG---------------------------------------------------------------------------
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-------------------TTTATTTATTTGGTGTACCCTTGTTTATTTGGGGA-CAGAGAG-----------GACGTCG
CCCTCCGAATTTCTACTCTTGTCGACATCGCCATCGAACATTACAACTCCAACAATCCAGTATGATAC--------TCTC
TCTCTCTCTCTCTCTCTCTC----------------TCTCTCTCTCTCTCTCATACACACA---CCACGCATCTAGGCGA
GTGCTTAATACATATGATTGTGAATTTGAGATGGATCACTGCGATGCAGGGTGCCGAGTTTGAGTATCCTGAGTATCCTC
CCCAGTCGACCACGGAGATGAAGGCTGCCTGCATCGGTTTTAGGGGAACTTTCTGGTACCACCTCTGCTTTT-CGGCTCA
CCCCATGGATGCCACCACCGAGACGCAGCACTTTTTCGCTGAGCTATATTTTGATAGACAGTACCTTGAACTAGCCGTTG
AAACATGCATCATCTTAGGTACTACCTAAATTTAACTTCACATTCCGCCAT-----------------------ACTGTG
TTTGTGTTTGCTAGCCACTTGAATATATGCGTACTATTAATGCAACTTGCAGCTAATCCTCTCTCTATATTTCTCTATAA
TGTCCAACAGAAAAGCCGTTGTGCCGCTTTAGCAGCTCGTGTGCATTTTGTCCAGACGAATCCAATATCTTGCACCCAAG
TGATGAAAAATTTGTCTGTGGAAAGCAAGATCACAAAAAAGAATTCTTCCGCAGGAGAGATATGCTAGTGCGGCCATACA
ATTCTTTTATGACACCTCCTGATATAGATAACA-----------------------------------------------
--------------------------------------------------------------------------------
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>chr6A_1262
--------------------------------------------------------------------------------
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-------------ATTATGTTTATTTATTTGGTGTACCCTTGTTTATTTGGAGA-CAGAGAT-----------ATCGTCG
CCTTCCGAATTTCTCAGCTTGTTGACGTCGCCCTTGAACATTACAACTCCAACAACCCGGTATGATAC--------TCTC
TCCG--------------------------------TCTCTCCCTCT------------------CATACATCCAGGCGA
GTACTTAATACTTATGATTGAGGGTTTGAGATCGATCGCTGAGATGCAGGGTGCCGAGTTCGAGTATCCTGAGTATCCTC
CC------ACCACAGAGATGAACGCCGTCTGCATCGGTTTTAGGGAAACTTTCTGGTACCACCTCGGCTTTT-CGGCTCG
CCCAGTGGATGCCACCGCCGAGACGCAACACTTCTTTGCCGAGCTATATTTTGATAGACGCTGGTGCCAAATAGTCGTTG
AAACATGCACTATCTTAGGTACTACCTAAATTTATCTTTACATTC-GCCAT-----------------------A-----
-CTGTGTTTGCTAGCCACTTGAGTATATCCATATCATTAATGTAACTTGCAGCTAATTCTGTCTTTATCTTTCTCTGTAA
TG-TCAACAGAAAAGCCGTTGTGCCGCTTTAGAGCCTCGTGTGCATTTTGTCCAGATGAATCCAATGTCTTGCACCCAAG
CAGTGCAGATTTTTTCTGTGGAAAACAAGATCACGAAAAAGAATTCTTTCGCAAGAGAGATATGCTAGTGCGGCCATTCA
ATTCTTTTATGACACCTCCTGATATAGATAGCACCGACGATCCATGACTCAACACATATGTTATGGCCCATGGATTATAG
TTGTAAAATAA---------------------------------------------------------------------
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>chr6A_1262
--------------------------------------------------------------------------------
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-------------ATTATGTTTATTTATTTGGTGTACCCTTGTTTATTTGGAGA-CAGAGAT-----------ATCGTCG
CCTTTCGAATTTCTCAGCTTGTCGACGTCGCCCTTGAACATTACAACTCCAACAACCCGGTATGATAC--------TCTA
TCCG--------------------------------TCTCTCCCTCT------------------CATACATCTAGGCGA
GTACTTAATACTTATGATTGAGAGTTTGAGATCGATCGCTGAGATGCAGGGTGCCGAGTTCGAGTATCCTGAGTATCCTC
CC------ACCACGGAGATGAACGCCGTCTGCGTCGGTTTTAAGGGAACTTTCTGGTATCACGTCGGCTTTT-CGGCTCG
CCCAGTGGACGCCACCGCCGAGACGCAACACTTCTTTGCCGAGCTATATTTTAATAGACGCTGCCGCCAAATAGCTGTTG
AAACATGCACTATCCTAGGTACTACCTAAATTTATCTTTACATTCCGCCAT-----------------------ACTG--
----TGTTTGCTCGCCACTTGAGTATATCCATATCATTAATGTAACTTGCAGCTAATTCTGTCTTTATCTTTCTCTGCAA
TG-TCAACAGAAAAGCCGTTGTGCCGCTTTAGAGCCTCGTGTGCATTTTGTCCAGATGAATCCAATATCTTGCACCCAAG
CAGTGCAGATTTTTTCTGTGGAAAACAAGATCATGAAAAAGAATTCTTTCGCAAGAGAGATATGCTAGTGCGGCCATTCA
ATTCTTTTATGACACCTCCTGATATAGATAGCACCGACGACGCATGACTCAACTCATATGTTATGGCCTATGGATTACAG
TTGTAAAATAAGTATGTTTTTCTTCTTGACTCGAGTCTTATATTATGGCCTACGGATTACAGTTGTAAAATAAGTATGTT
TTTCTTCTTGTTTATATCGTCCTTGTTGTTCAATTTCGTTGACCACTAGAAAATTAAAAACTAG---TATTTCGAAATTT
AATGTGCACAAGAACGAGA-------------------------------------------------------------
----------ACCAGAACTGATAAGCATGGCTGCAGCTATAGCGCATAAGACCAGCC-----TTTCTCTCTCTTTCATTT
CAGTGGTGTAATTTCTGTTATATTTCACTCGGCTGAGGCTTCCAATGATAATGATTAGCTAGCCTTTTGTGTTGTGGCAA
TGCGATGGAGACGTTAGGTTATCCTAATGTGTTTTTCCCATGATAGAACATATTGATCGAGCTTTTATAAATCTCTCATG
GGATCAAC------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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>chr2D_1266
--------------------------------------------------------------------------------
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-----------------TGTTTATTTATTTGGTGTACCCTTGTTTCTTTGGGGA-CAGACAG-----------GACGTCG
CCCTCCGAATTTCTACGCTTGTCGACATCGCCATCGAACATTACAACTCCAACAATCCAGTATGATAC--------TCTC
TCTCTCTCTCTCTCTCTCTC----------------TCTCAG----------ATACACACA---CCACGCATCTAGGCGA
GTGCTTAATACATATGATTGAGAATTTGAGATCGATCACTGCGATGCAGGGTGCCGAGTTCGAGTATCCTGAGTATCCTC
CCCAGTCGACCACGGAGATGAAGGCTGCCTGCATTGGTTTTAGGGGAACTTTCTGGTACCACCTCTGCTTTT-CGGCTCA
CCCCATGGATGCCACCGCCGAGACGCAACACTTTTTCGCTGAGCTATATTTTGATAAACAGTACCTCGAACTAGCCGTTG
AAACATGCATCATCTTAGGTACTACCTAAATTTAACTTCACATTCCGCCAT-----------------------ATTGTG
TTTGTGTTTGCTAGCCACTTGAATATATGCATACTATTAATGCAACTTGCAGCTAATCCTCTCTCTATATTTCTCTATAA
TG-TCAACAGAAAAGCCGTTGTGCCGCTTTAGCAGCTCGTGTGCATTTTGTCCAGACGAATCCAATATCTTGCACCCAAG
TGATGAAGAATTTGTCTGTGGAAAGCAAGATCACAAAAAAGAATTCTTCCGCAGGAGAGATATGCTAGTGCGGCCATACA
GTTCTTTTATGACACCTCCTGATATAGATAACA-----------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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-----------------------------------------------------------------------------
>chr2B_1269
--------------------------------------------------------------------------------
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--------------------TTATTTATTTATATCT-CCTTGTTTATTTCATGATTAGAGAG-----------ATGATCG
CCTTCCGTATTTCCATGCTTGTCGACCTCGCCCTTGAACATTACAACTCCAACAACCCGGTATGATAAAACCTCAATCTC
TCTCTCTCTCACTCTCTCTC----------------TCTGG------------------------CATGCATCCATGTGA
GTGCTTAGTACTTATGCCTG------TGAGATCGATTGCTACGATGCAGGATGCCGAGTTCGAGTATCCTGTCCGA----
-----TCGACCACGGAGATGAATGCCGCCTGCATCGGTTTTAGGGGAACTTTCTGGTACCACCTCGGCTTTA-CGGCTCG
CCCGATGGAGGCAACCGCTGAGAAGCAGCAGTTCTTTGCCGAGCTATATTTTGATAGACGCTCTAATCAGTTGGCCGTTG
AAACGTGCACCATCTTAGGTACCACCTAAATTTATCTTTACATTCCTCGAAGCCTCAATCGGCCTTACCAACTAA-----
-TTGTGTTTGGTGGTAACTGGAACTTATTATTATTAT----GCAACTTG--GCTAACTCTCTATCTCTAT-------TAA
TG-TCAACAGAAAAGCCGTTGTGCCGCTTTACCAGGACGTGTGCATTTTGTCCAAACGAATCCAAGATTTGGCACCCAAG
CGATGCAGAATTTGTGTGTGGAAAGCAAGACCATGAAAACGAATTCTTCCGCAAGAGGGATATGCTAACGCGGCCATTCA
ATTCTTTTGTGATAGCTCCTGATATAGATGGCGCCGATGATCCATGACTCAACTCTTATGTTATAGCCTATGTATTGATG
TTGTAACATAAC--------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------------------------------
>SNPs
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------S-----------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSS---------------------------------------------S-------------------------
S-------S--------S-----SS-SSSS-----------SSS----------------------------------S-
----SS--------------------------------S-------------------S---------------------
------------------------------S----------------------------------------S--------
-------------------------------------------------------------------------S------
--------------------------------------------------------------------------------
-----------------------------------------SSS---------------------S--------------
S----------S----------------------------------------S--------------------------S
------------S-------------------------------------------------------------------
-----------S--------SSSSSSSSSSSSSSSS--------------------------------------------
---------------------------S----------------------------------------------------
-S------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-S-------------------------------------------S----------------------------------
---------------------S---------------------S-S------------------------S---------
----------S---------------------------------------------------------------------
---------------------------S--------------S-------------------------------------
-------------------------------------------------------------------S---S--------
--------------------------------------------------------------------------------
---S------------------------------------------------------------SSS-------------
--------------------------------------------------------------------------------
----------------------------------------S---------------------------------------
--------------S-----------S----------------------S-----------------------------S
----------------S---------------------S--------------------------------S--------
--------------------------------------S--------S-------S------------------------
----------------------S----------------------S--------------------------S-------
S---------S------------S-------------------S-----S-----------------------S------
------------------------S-------S---S---------S-------------------S---S-S-------
-S---------SS----------S-----S-S----------S-------S------------SS--S-SSSSS------
------------S----S---------------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
>forward_842
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------TACACGAGCAAAGGCAGGTC--------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------------------------------
>reverse_3030
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
---------------------------------------------------------------------GCACAAACGGC
CAAACTGAT-----------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------------------------------
