>input_sequence_62811
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--------------------------------------------------------------------ATGGACAACCCC
CTCCCGCAGCCGCGCAGGCGCAGGCCCGTCGTCCTGATCGCCTCCTGCGCGCTGATCCTCCTCGCCACCGC---CCTCCT
CCCGCGCGCTCCCGCCGTCCCGCCGCTGACCCCGGCCATCCGCCTCGACCCGCGGGTCGCACGCAGGAGCGGCAACGAGG
TGCTGTGGCAGCTGCCGCCAGGCCCGCCGCGCGCCGCCGTGTTCGTCTCCCCCGGATGCACCATCCGCGCCACCGACTTC
TTCGACGCCTCCCCCGGCTGCCCGCGCTGCGCGGGGCTCCCCGAGGAGCGCCGGTTCACGCGCGAGGCGCTCCGCCGAGG
CTACGCCGTCCTCGCTGTGTCCAGCCGCGCCGAGTGCTGGTCCCTCGACGCCGCCT------CCGGCGACGGCAGTGAGC
TCGCCGCCGTCGGTTCCATCATCGAATGGTGGGTCAAGGAGCAGCACCCCGAGCTCGGCCGCCTCCCGCTCGTCGGCATC
GGCGCGTCGTCGGGCGGGTACTTCGTCTCCGCGCTGGCGGCGAGGGTCAGGTTCAGCAGCGTGGCCATCATGATCGCCGA
GGGCGTGTTTGCCGCCATGGAGGAAATCCCGCCCGGCTACCCGCCGGCGCTGTTCGTGCACATGCCCAGGGACGCCAAGA
GGGCGCACATGGTGGCGTCAAGCATAGACAAGCTCAAGTCAAAGCACGTTGATGTACGGGAGATCCAGTGCGATGCCTTT
GCCGTGAGTGCCGACTTCTTGGCGGCGAGGATCCCGGGGTTGACTCCGACCGTCGCCGATGGCCTTGTGGACGTGCTTCG
CCAGAAGTCGTTCTTGGATGAGAAGGGTTTTCTGAAGAAGGATGGGAGGAGAACACCGTGGCAGGAGGCGGCGGAGGAAG
CCAAGATCTTGCCGGAGGGGTTCCGGCTGGAGAGGCATGTCACGGAGGAGTTGAATATTGCATATGCATACCATGAATTT
ACCAGCCTGGAGAATGAAGAGATCTTCAAATGGTTCGATTCCCATATGGATCACAAGATTTGA-----------------
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>chr3B_1_TraesCS3B01G129300
GACGAGGAGGGCGCCACCACCACCGTC-ATC---CTGGTCCACATCCACGCGCTGCTTGGTGTCACTAGGTCACCGGCAC
AA-TCCTCACGCCCAGATCGTTCAACATTTTCTTCCGCTTTTGGTGCGTCACATTT--AGAGTCTTTCTTTCCCATTTTA
CCGTGTTTGCATGATAAGATGTTTGGTTGGATTTGAAGGTTCGTAGCCTTGGCTCCAAAGCTTCAAGCTCTTATAGAAAT
TAGAACT--GAGGGCCTTTTAAATTTAGTCTTGCATAATAGTGTTTTTCAGTGGGATGCAGAATTTTTGTTTGTCTGATC
GACTATCCTTGGTGCTGATTT-ACGTACTGAGTTCATCATCATATGACTATAACAAAGAAGTTGTGTGTATAAATATTAC
TAACTGCTGATACTTTGCGTCAGTGATTTCAATTCTGTTGGTCCTCCTTAATATTGCTTGGGATTGTGAGGCTTAAAAGT
TTCAACCCTGTGCAATGTGCTTCTCGGGTGTGGATTTGT----GACTAATTAACGGTTTTGTTAATACTGATATTTCTTT
GAACATTATATGGGTATTGCATCGCTTGTACTTATAATAAATGT-A-ATTCTTTTCATATGTTTCAATATGTGCCTGAAT
GATA---TTAATGTACACTCTTCCAATACATGGCTTACTTTTGGCCTTT------TTAGCGCAACTAATCATCTAGTCCG
ACGAAAAAGCCCCACCGTGAGCGGCCGTCAGCGAGGAAAGAGAAACTGTCGTTGAAACTCGTCGTTCCTTCTACGCTACT
CTTATAAAATAAAAAAACTCGTCGTTCCGGGCCAGGCTAAGACGCCGGGCCAACTTTCCACATGGGCCTCCTCTACACCC
AGCCCCACGGACGTTTCTTCCTCCCAGTGTTGTTCAGAGCTT-CGTTCCCCTTTGTCCAGAGCAAGTCAACTCAGTCACT
TTCTCCATCAACGCGAAGCCCCAAACCGTCTCAA-TCTCCATTAACGCG-AGGTTAACCGCGCGCAGGATGGACAACCCC
CTCCCGCAGCCGCGCAGGCGCAGGCCCGTCGTCCTGATCGCCTCCTGCGCGCTGATCCTCCTCGCCACCGC---CCTCCT
CCCGCGCGCTCCCGCCGTCCCGCCGCTGACCCCGGCCATCCGCCTCGACCCGCGGGTCGCACGCAGGAGCGGCAACGAGG
TGCTGTGGCAGCTGCCGCCAGGCCCGCCGCGCGCCGCCGTGTTCGTCTCCCCCGGATGCACCATCCGCGCCACCGACTTC
TTCGACGCCTCCCCCGGCTGCCCGCGCTGCGCGGGGCTCCCCGAGGAGCGCCGGTTCACGCGCGAGGCGCTCCGCCGAGG
CTACGCCGTCCTCGCTGTGTCCAGCCGCGCCGAGTGCTGGTCCCTCGACGCCGCCT------CCGGCGACGGCAGTGAGC
TCGCCGCCGTCGGTTCCATCATCGAATGGTGGGTCAAGGAGCAGCACCCCGAGCTCGGCCGCCTCCCGCTCGTCGGCATC
GGCGCGTCGTCGGGCGGGTACTTCGTCTCCGCGCTGGCGGCGAGGGTCAGGTTCAGCAGCGTGGCCATCATGATCGCCGA
GGGCGTGTTTGCCGCCATGGAGGAAATCCCGCCCGGCTACCCGCCGGCGCTGTTCGTGCACATGCCCAGGGACGCCAAGA
GGGCGCACATGGTGGCGTCAAGCATAGACAAGCTCAAGTCAAAGCACGTTGATGTACGGGAGATCCAGTGCGATGCCTTT
GCCGTGAGTGCCGACTTCTTGGCGGCGAGGATCCCGGGGTTGACTCCGACCGTCGCCGATGGCCTTGTGGACGTGCTTCG
CCAGAAGTCGTTCTTGGATGAGAAGGGTTTTCTGAAGAAGGATGGGAGGAGAACACCGTGGCAGGAGGCGGCGGAGGAAG
CCAAGATCTTGCCGGAGGGGTTCCGGCTGGAGAGGCATGTCACGGAGGAGTTGAATATTGCATATGCATACCATGAATTT
ACCAGCCTGGAGAATGAAGAGATCTTCAAATGGTTCGATTCCCATATGGATCACAAGATTTGAAGGCACATAATTTCTAG
CTGGCCAACTTGATGTCGGATTCATGGAGTGTTGCTGGTTTTGAGAGGATGCACCATTATGATTCATGGGAGGTGGAAAG
AAAGCACAATATTCTGTAAGGTTTATCCTCAAAGCTTGTAGTTTAACATAGACACTTATGGAATATGGTTTCTCATAGCG
TCATGTTTTCCTTTGCCATTGTGGTTACTGCTTTATTGGTGTCACAAGCAAATGAGTGAACTGACCTCATTGTTGTTACT
GTTGTAACTCATCGCATAGAAA--TGTGTTAATACTGTAGAAAATGA---TATAACTTTTGATAAATTTATCCTCTCTGA
GCAAAGTTCTTTTTTGTGCAGCCACATTTTTCCAACTCCACTTGGATATCTTGTCATAGTGTCAGGTTCTGACTAACTGA
CAGTATATCTCTTCTGTGTTGAGTAGGATAACATTT-CTTTTGTAAGAATATAACTAAAACATAA-CCATGCTTAATCAG
TAGGGATGCTGGTGGACATGCCCGTCGTGTCCGTGTCTGTCTGCGCTGGACCAAGATGTA----CTAATCTCTGCTGCTG
TAATTTTCGTGCTAATGCTGAAATGATCAACACGGACTCGGTGGACATGTCGACCTGCATTCCTATCAGTCAGTCACTAG
AAAAACTGATAGTCAATTTTCTTACAACTATTTGGTGTTCAAAGTAGGA-------CATCCAGAGAAATGATCATTGCAG
GTCTTTTTTATATCTAGG-----TACTCCGTTACTTGCAGTATTATCCTGTATGTAAGTGGATAATGTCAATTCATTGAT
AAATAATCAATCAGCAGTTGAGCACAGAGCACCGAATCTGCAAAGAAGTGTTTGAAATCACTTATGAATAGCTATATGCA
ATTATGTATCTACAATAATAAACAATAAATATGAATGCTACTACTAAATTCATCCATTTAACTCGACATTCAGATATTAT
TAGTTACCTCTCAGGCTCTCACCCAACCTTACCTTTACTCAAGTAG
>chr4D_1
GACGAGGAGGGCGCCGCCACCACCGTC-ATC---CTGGTCCACATCCACGCGCTGCTCGGCGTCACCAGGTCACCGGCAC
AA-TCCTCACGCCCAGGTCGTTCAACATTTTCTTCCGCTTTTGGTGCGTCACATTT--A--GTCTTTCTTTCCCATTTTA
CCGTGTTTGCATGGTAAGATGTTTGGTTGGATTTGAAGGTTCGTAGCCTTGGCTCCAAAGCTTCAAGCTCTTATAGAAAT
TAGAACT--GAGGGCCTTTTAAAATGAGTCTTGCATAATAGTGTTTTTCAGCGGGATGCAGAATTTTTGTTTGTCTGATC
GGCTATCCTTGGTGCTGATTT-ACGTACTGATTTCATCATCATATGACTACAATAAAGAAGCTGTGTGTATAAATATTAC
TAACTGCTGATACTTTGCATCTGTGATTTCAATTCTGTTGGCCCTCCTTAAGATTGCTTGGGAATGTGAGGCTTAAAAGT
TTCAACCCTGTGCAGTGTGCTTCTCGGGTGTGGATTTGTGTCTGACTAATTAACGGTTCTGTTTATACGGATATTTCCTT
GAACATTATATGGGTATTGTATCACTTGTATTTATAGTAAGTGGATTTTTTTCTTCATATATTTTAATATGTGCCCGAAT
AATA---TTAATGTACACTCTTTTAATACATGGTTTACTCTTGGCCTTT-------------------------------
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>chr5D_1
GACGAGGAGGGCGCTGCCACCACCGTT-ATCAGGCTGGTCCACATCCACGCGCTGCTCGGCGTCACCAGGTCACCGGCAC
AACTCCTCACGCCCAGGTCGTTCAACATTTTCTTCCGCTTTTGGTGCGTCACATTT--A--GTCCTTCTTTCCCATTTTA
CCGTGTTTGCATGGTAAGATGTTTGGTTGGATTTGAAGGTTCGTAGCCTTGGCTCCAAAGCTTCAAGCTCTTATAGAAAT
TAGAATT--GAGGGCCTTTTAAAATGAGCCATGCATAATAGTGTTGTTCAGTCGGATGCATAATTTTTGTTTGTCTGATC
AGCTATCCTTGGTGCTGATTTTACGTATTGATTTCATCATCATATGACTACAATAAAGAAGCTGTGTGTATAAATATTAC
TAACTGCTGATACTTTGCATCAGTGATTTCAATTCTGTTGG-CCTCCTTAGGATTGCTTGGGAATGTGAGGCTTAAAAGT
TTCAACCCTGTGAAATGTGCTTCTCGGGTGTGGA---------GACTAATTAACGGTTCTGTTAATACTGATATGTCCTT
GTACATTATACGAGTATTGCATCACTTGTACTTATAGTGAGTGGAA-AATTTTCTCATATGTTTAAATATGTGCCTGAAT
AATAATATTAATGTACACTCTTTCAATACATGGCTTACTCTTGGCCTTTGCGCCATTGGCGCAACTGATCATCTAGT---
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>chr7D_1
GACGAGGAGGGCGCCGCCACCACCGTC-ATCAGGCTGGTCCACATCCATGCGCTGCTCGGCGTCACCAGGTCACCGCCAC
AACTCCTCACGCCCAGGTCGTTCAACATTTTCTTCTGCTTTTGGTGTGTCACCTTTAGA--GTCTTTCTTTCCCATTTTA
CCGTGTTTGCATGGTAAGATGTTTGGTTGGATTTGAAGGTTCGTAGCCTTGGCTCCAAAGCTTCAAGCTCTTATAGAAAT
TAGAACT--AAGGGCCTTTTAAAATGAGTCCTGCATAATAGTGTTGTTCAGTGGGATGCAGAATTTTTGTTTGTTTGATC
GGCTATCCTTGGTACTGATTT-ACGTACTGATTTCATCTTCATATGACTATAATGAAGAAGCTGTGTGTATAAATATTAC
TAACTGCTGATACTTTGCATCAGTGATTTCAATTATGTTGGCCCTCCTTAAGATTGCTTGGGAATGTGAGGCTTAAAAGT
TTCAGCCCTCTGCAATGTGCTTCTCGGGTGTGGATTTGTGTCTGACTAATTAACGGTTCTGTTAATAGTGATATGACCTT
GTACATTATATGGGTATTGCATTGCCTGTACTTATAGTAAGTGGAA-TTTTTTCTCATATGTTTAAT-------------
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>chr3B_4
---GAGGAGGACGCCGCCACCACCGTC-ATCAGGCTGGTCCACATCCACGCGCTGCTCGGCGTCGCCAAGTCACCGGCAC
AACTCCTCACGCCCAGGTCGTTTAACATTTTCTTTCGCTTTTGGTGTGTCGCATTTAGA--GTCTTTCTTTCCCATTTTA
CCGTGTTTGCATGGTAAGATGTTTGGTTGGATTTGAAGGTTCATAGCCTTGGCTCCAAAGCTTCAAGCTCTTATAGAAAT
TAGAACT--GAGGGCCTTTTAAAATGAGTCCTGCATAATAGTGTTGTTCAGTGGGATGCAGAATTTTTGATAGTCTGATC
GGCTATCCTTGGTGCTGATTT-ATGTACTGATTTCATCATCATATGACTACAATAAAGAAGCTATGTGTATACATATTAC
GAACTGCTGATACTTTGCATCAGTGATTTCAATTCTGTTGGCCCTCCTTAAGATTGCTTGGGAATGTGAGGCTTAAAAGT
TTCAACCATGTGCAATGTGCTTCTCGGGTATGGATTTGTGTCTGACTAATTAACGGTTCTGTTAATACTGATATGTCCTT
GAACATTATATGGGTATTGCATCGCTTGTACTTATAGTATGTGAAC-ATTTTTTTCATATGTTTCAACATGTGCCCGAAT
AATA---TTAATGTACACTCTTTTAATACATGGCTTACTCTTGGCCTTT-------------------------------
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>chr5B_4
---GAGGAGGACGCCGCCACCACCGTC-ATCAGGCTGGTCCACATCCACGCGCTGCTCGGCGTCGCCAGGTCACCGGCAC
AACTCCTCACGCCCAGGTCATTCAACATTTTCTTTCGCTTTTGGTGTGTTGCATTTAGA--GTCTTTCTTTCCCATTTTA
CCGTGTTTGCATGGTAAGATGTTTGGTTGGATTTGAAGGTTCATAGCCTTGGCTCCAAAGCTTCAAGCTCTTATAGAAAT
TAGAACT--GAGGGCCTTTTAAAATGAGTCCTGCATAATAGTGTTGTTCAGTGGGATGCAGATTGTTTGGTAGTCTGATC
GGCTATCCTTGGTGCTGATTT-ATGTACTGATTTCATCATCATATGACTACAATAAAGAAGTTATGTGTATAAATATTAC
GAACTGCTGATACTTTGCATCAGTGATTTCAATTCTATTGGCCCTCCTTAAGATTGCTTGGGAATGTGAGGCTTAAAAGT
TTCAACCATGTGCAATGTGCTTCTCGGGTGTGGATTTGTGTCTGACTAATTAACGGTTCTGTTAATACTGATATGTCCTT
GAACATTATATGGGTATTGCATCGCTTGTACTTATAGTATGTGAAC-ATTTTTCTCATATGTTTCAATATATGCCCGAAT
AATA---TTAA-GTACACCCTTTCAATACATGGCTTACTTTTGGCCTTT-------------------------------
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>chr3B_7
------GAGGGCGCCGCCACCACCGTC-ATCAGGCTGGTCCACATCCACGCGCTGCTCGGCGTCACTAGGTCACCGGCAC
AACTCCTCACACCTAGGTCGTTCAACATTTTCTTCCGCTTTTGGTGCGTCACATTTAGA--GTCTTTCTTTCTCATTTTA
CCGTGTTTGCATGGTAAGATGTTTGGTCGGATTTGAAGGTTTGTAACCTTGGCTCCAAAGCTTCAAGCTCTTATAGAAAT
TAGAACC--GATGACCTTTTAAAATGAGTCCTGCATAATAGTGTTGTTCAGTGGGATGCAGAATTTTTGTTCGTCTGATC
GGCTATCCTTGATGCTGATTA-AAGTACTGATTTCATCATCATATGACTACAATAAATAAGTTGTGTGTATAAATATTAC
TAACTGCTGATATTTTGCATCAGTGATTTCAATTCGGTTGGCCCTCTTTAAGATTTCTTGGGAATGTGAGACTTACAAAT
TTCAACCCTGTGCAATGTGCTTCTCGGGTGTGGATTTGTGTCTGACTAATTAATGGTTCTGTTAATACTGATATGTCTTT
GAAAATTATATGCGTATTGCATCGCTTGTACTTATAGTAAGTAGAA-ATTTTTCTCATATGTTTCAATATGTGCCCGAAT
AATA---TTAATGTACACTCTTTTAATACATGGCTTATTCTTGGCCTTT-------------------------------
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>chr5B_7
------GAGGGCGCCGCCACCATCGTCAATCAGGCTGGTCCACATCCACGCGCTGCTCGGCGTCACCAGGTCACCGGCAC
AACTCCTCACGCCCAGGTCGTTCAACATTTTCTTCCGCTTTTGGTGTGTCACATTTAGA--GTCTTTCTTACTCATTTTA
CCGTGTTTGCATGGTAAGATGTTTAGTCGGATTTGAAGGTTCGTAGCCTTGGCTCCAAAGCTTCAAGCTCTTATAGAAAT
TAGAACC--GAGGGCCTTTTAAAATAGGTCCTGCATAATAGTGTTGGTCCGTGGGATGCAGAATTTTTGTTTGTCTGATC
GGCTATCCTTGATGCTGATTT-AAGTACTGATTTCATCATCATATGACTACAATAAAGAAGTTGTGTGTATAAATATTAC
TAACTACTGATATTTTGCATCAGTGATTTCAATTCTGTTGGCCCTCCTTAAGATTGCTTGGGAATGTGAGGCTTAAAAGT
TTCAACCCCGTGCAATGTGCTTC-CGGGTGTGGATTTGTGTCTGACTAATTAACGGTTCTGTTAATACTGATATGTCCTT
GAACATTATATGGGTATTGCAT----TGTACTTATAGTAAGGGGAA-ATTTTTCTCATATGTTTCAATATGTGTCCGAAT
AATA---TTAATGTACACTCTTTCAATACATGGCTTACTCTTGGCCTTT-------------------------------
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>chr5A_7
------GAGGGCGCCGCCACCACCATC-ATCAGGCTGGCCCACATCCACGCGCTGCTCGGCGTCACCAAGTCACCGGCAC
AACTCCTCACGCCCAGGTCGTTCAACATTTTCTTCCGCTTTTGGTGCGTCACATTTAGA--GTCTTTCTTTCCCATTTTA
CCGTGTTTGCATGGTAAGATATTTGGTCGGATTTGAAGGTTCGTAGCCTTGGCTCCAAAGCTTCAAGCTCTTATAGAAAT
TAGAACT--G--GGCCTTTTAAAATAAGTCCTGCATAATAGTGTTGTTCAGTGGGATGTAGAATTTTT-TTTGTCTGATC
GGCTATCCTTGGTGCTGATTT-AAGTACCGATTTCATTATCATATGACTACAATAAAG--GCTGTGTGTATAAATATTAC
TAACTGCTGATAGTTTGCATCAGTGATTTCAATTCTGTTGGCCCTCCTTAAGATTGCTTGGGAATGTAAGGCTTAAAAGT
TTCAACCCTGTGCAATGTGCTTCTCGGGTGTGAATTTGTGTCTGACTAATTAACAGTTCTGTTAATACTGATATGTCTTT
GAACATTATATGGGTATTGCATCGCTTGTACTTATAGCAAGTGGAA-TTTTTTCTCATATGTTTCAATATGTGTTCGAAT
AATA---TTAATGTACACTCTTTCAATACATGGCTTACTCTTGGCCTTT-------------------------------
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>chr5A_7
------GAGGGCGCCGCCACCACCGTC-ATCAGGCTGGCCCACATCCATGCGCTGCTCGGCTTCAGTAGGTCACCGGTAC
AACTCCTCACGCCCAGGTCGTTCAACATTTTCTTTCGCTTTTGGTGCGTCACATTTAAA--GTCTTTCTTTCCCATTTTA
CCATGTTTGCATGGTAAGATGTTTGGTCGGATTTGAAGGTTTGTAGCCTTGGCTCCAAAGCTTCAAGCTCTTATAGAAAT
TAGAAATGAG--GGCCTTTTAAAATGAGTCCTGCATAATAGTGTTGTTCAGTGGGATGCAGAATTTTTGTTTGTCTGATC
GGCTATCCTTGGTGCTGATTT-AAGTACTGATTTCATCGTCATATGACTACAATAAAGAAACTGTGTGTATAAATATTAC
TAACTGCTGATACTTTGCATCAGTGATTTCAATTCTGTTGGCCCTCCTTAAGATTGCTTGGGAATGTGAGGCTTAAAAGT
TTTAACCGTGTACAATGTGCTTCTCGGGTGTGGATTTGTGTCTGACTAATTAACGGTTCTGTTAATACTGATATGTCCTT
GAACATTATATGGGTATTGCATCGCTTGTACTTATAGCAAGTGGAA-TTTTTTTCTC-ATATGTAAATATGTGCCCGAAT
AATA---TTAATGTACACTCTTTCAATACATGGCTTACTCTCGGCCTTT-------------------------------
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>chr3D_786
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----------AAAAAAACTTGTCGTTCCGGGCCAGGCTAAGACGCCGGGCCACCTTTCCACATGGGCCTCCTTTACACCC
AGCCCAATGGACGTTTCTTCCTCCCAGCGCTGTTCAGAGTTTGCGTTCCCCTTTGTCCAACGCAAGTCAACTAAGTCACT
TTCTCCATTAACGAGAAGCCCCAAACCGTCTCAAATCTCCATTAA---------------CGCGAAGGATGGACAACCCC
CTCCCGCGGCC------GCGCAGGCCCGTCGTCCTGATCGCCTCCTGCGCGCTGATCCTCCTCGCCACCGCCCTCCTCCT
CCCGCGCGCTCCCGCCGTCCCGCCGCTGACCCCGGCCATTCGCCTCGACCCGCGGGTCGCGCGCAGGAGCGGCAACGAGG
TGCTGTGGCAGCTCCCCCCAGGCCCGCCGCGCGCCGCCATGTTCATCGCCCCCGGATGCACCATCCGCGCCACCGACTTC
TTCGACGCCTCCCCCGGCTGCCCGCGCTGCGCGGGGCTCCCCGAGGAGCGCCGGTTCACGCGCGAGGCGCTCCGCCGAGG
CTACGCCGTCCTCGCCGTCTCCAGCCGCGCCGAGTGCTGGTCCCTCGACCCCGCCTCCGCCTCCGGCGACGGCAGCGAGC
TCGCCGCCGTCAGTTCCATCATCGAATGGTGGGTCAAGGAGCAGCACCCCGAGCTCGGCGGCCTCCCGCTCGTCGGCATC
GGCGCGTCGTCGGGCGGGTACTTCGTCTCCGCTCTGGCGGCGAGGGTCAGGTTCAGCAGCGTGGCCATCGTGATTGCCGA
GGGCGTGTTCGCCGCCATGGAGGAAATCCCGCCCGGCTACCCGCCGGCGCTGTTCGTGCACATGCCCAGGGACGCCAAAA
GGGCGCAGATGGTGGCGGCAAGCATAGGCAAGCTCAAGTCAACGCACGTTGATGTGCGGGAGATCCAGTGCGATGCCTTT
GCCGTGAGTGCCGACTTCTTGGCGGCGAGGATACCGGGGTTGACCCCGACCGTCGCCGATGGCCTTGTGGACGTGCTTCG
CCAGAAGTCGTTCTTGGATGAGAAGGGGTTTCTGAAGAACGATGGGAGGAGCACACCGTGGAAAGAGGCGGCGGAGGAAG
CCAAGATCTTGCCGGAGGGGTTCCGGCTGGAGAGGCATGTCACGGAGGAGTTGAATATTGCATATGCATACCATGAATTT
ACCAGCCTGCAGAATGAGGAGATCTTCAAATGGTTCGATTCCCACATGGATCACAAGATTTGAAGACACATCATTTCTAG
ATGGCCAACTTGATGTCGGATTCATGGAGAGTTGCTGGTTTTGAGAGGATGCACCGTTATGATTCATGGGAGGTGGAAAG
AAAGCACAATATTCTGTAAGGTTTATCCTCAAAGCTTGTAGTTTAACATAGC--CTTATGGAATACGGTTTCTCACAGGG
TCATGTTTTCCTTTGCCATTGTGGTTACTGCCTTATTGGTGTCACAAGCAAATGGGTGAACTGCCCTCATTATTGTTACT
GTTGTAACTCATCCCACAGAAATGTGTGTTAATACTGTAGAAAACGATAGTATAACTTTTGATAAATTTATCCTCTCTGA
GCAA-GTCCTTTTTTGTGCAGCCACATTTTTCCGACTCCACTTGGATATCTTGTCATAGTGTTAGGTTCTGACTAACTTA
CAGTATATCTCTTTTGTGTTGAGTAGGATAACATTTTCTTTTGTAAGTATATAACTAATACAGAAGCCATGCTTAGTCAG
TAGGGATGCAGGTGGACGTCCCTGCCGTTTCCGTGTCTGTCCGCGCCGGACCAAGATGTATGTACTAATCTCTGTTGCTG
TAATATTCGTGCTAATGCTGAAATGATTAACGCGGA-------------------------CCTATTAGTCAGTCACTAG
AAAAATTGATAGTCAATTTTGTTACGACTATTTGGTGTTCAAACTTCAAAGTAGTGCATCCGGAGATATGATCATTGCAG
TTTTTTCTTTTATATGTAGTTATTACTCTGTTACTTGCAGTGTTATCTTGTATGTAAGTGGATAGTGTCAATTCATTGAT
AAACAATCAGTCAGCAGTTGAGCACCGAC------ATCTGCAAAAAAATGTTTGAAATCACTTATCGGTAGCTATGTGC-
-------ATCTACAGCAATAAACAACAAAAAAGAATGCTATTACTAAATTCGTCCATTTAACTGGACATTCAGATATTAT
TAATTAC--------CTCTCACCCAACCTTACCTTTACCCAAGTA-
>chr3A_820
CC------------------------------------------------------------------------------
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-----------------------------------------------GGGCAACTTTCCAAATGGGCCTCCTCTACACCC
AACCCAACAGACGTTTCTTCCTCCCAGCGTTGTTCAGAGTTT-CGTTCCCCTTTTTCGAGAGCAAGTCAACTCAGTCACT
TTCTCCACTAACGCGAAGCCCCAAACCGTCTCAAATCTCCATTAGCGCGAAGGTCAACCGCGCGCAGGATGGACAGCCCC
CTCCCGCAGCCGCGCAGGCGCAGGCCCGTCGTCCTGATCGCCTCCTGCGCGCTGATCCTCCTCGCCACCGCCCTCCTCCT
CCCGCGCGCTCCCGCCGTCCCGCCGCTGACCCCGGCCGTCCGCCTCGACCCGCGGGTCGCGCGCAGGAGCGGCAACGAGG
TGCTGTGGCAGCTGCCGCCGGGCCCGCCGCGCGCCGCCGTGTTCGTCGCCCCCGGGTGCACCATCCGCGCCACCGACTTC
TTCGACGCCTCCCCCGGCTGCCCGCGCTGCGCGGGGCTCCCCGAGGAGCGCCGGTTCACGCGCGAGGCGCTCCGCCGAGG
CTACGCCGTCCTCGCCGTGTCCAGCCGCGCCGAGTGCTGGTCCCTCGACGCCGCCTCCGCCTCTGGCGACGGCAGCGAGC
TCGCCGCCGTCGGTTCCGTCATCGAATGGTGGGTCAAGGAGCAGCACCCCGAGCTCGGCGGCCTCCCGCTCGTCGGCATC
GGCGCGTCGTCGGGCGGGTACTTCGTCTCCGCGCTGGCGGCGAGGGTCAGGTTCAGCAGCGTCGCCATCGTGATTGCCGA
GGGCGTGTTTGCCGCCATGGAGGAAATCCCGCCCGGCTACCCGCCGGCGCTGTTCGTGCACATGCCCAGGGATGCCGACA
GGGCGCAGATGGTGGCGGCAAGCATAGACAAGCTCAAGTCAAAGCACGTTGATGTGCGGGAGATCCAGTGCGACGCCTTT
GCCGTGAGTGCCGAGTTCTTGGCGGCGAGGATCCCGGGGTTGACTCCCACCGTCGCCGATGGCCTTGTGGACGTGCTTCG
CCACAAGTCCTTCTTGGATGAGAAGGGGTTTCTGAAGAACGATGGGAGGAGCACACCGTGGAAGGAGGCGGCGGAGGAAG
CCAAGATCCTGCCGGAGGGGTTCCGGCTGGAGAGGCATGTCACGGAGGAGTTGAATATTGCATATGCATACCATGAATTT
ACCAGCCTGGAGAATGAAGAGATCTTCAAATGGTTCGATTCCCATATGGATCACAAGATTTGAGGGCACATCATTTGTAG
ATGGCCAACTTGATGTCGGATTCATGGAGTGTTGCTGGTTTTGAGAGGATGCACCGTTATGATTCATGGGAGGTGGAAAG
AAAGCACAATATTCTGTAAGGTTTATCCTCAAAGCTTGTAGTTTAACATAGACACTTATGGAATATGGTTTCTCATAGCG
TCATGTTTTCCTTTGCCATTGTGGTTACTGCCTTATTGGTGTCACAAGCAAATGGGTGAACTGCCCTCATTGTTGTTACT
GTTGTAACTCGTCCAACAGAAATATGT--TAATGCTGTAGAAAACGATAGCACAACTTTTGATAAATTTATCCTCTCTGA
GCAA-GTCCTTTTTTGTGCAGCCACATTTTTCCGACTCCACTTGGATATCTTGTCATAGTGTTAGGTTCTGACTAACTGA
CAGTATATCTCTTTTGTGTTGAGTAGGATAACATTTTCTTTTGTAAGAATATAACTAAAACAGAAGCCATGCTTAGTCAG
TAGGGATGCAGGTGGACGTCCCTGCCGTTTTGGTGTCTGTCCGCGCCGGACCAAGATGTATGTACTAATCTCTGTTGCTG
TAATAGTTGTGCTAATGCTGAAATGATTAACGCGGA-------------------------CCTATTAGTCAGTCACTAG
AAAAATTGATAGTCAATTTTGTTACAACTATTTGGTGTT-------CAAAGTAGTGCATCCGGAGAAATGATCATTGCAG
CTTTTTTTATATCTA-TAGTTATTACTCTGTTACTTGCAGTGTTATCCTGTATGTAAGTCGATATTATCAATTCATTGAT
AAACAATCAGTCAGCAGTTGAGCACCGAC------ATCTGCAAAAAAATGTTTGAAATCACTTATCAGTAGCTAT-----
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>SNPs
---------------S-----------------------------------------S--S-------------------
----------------S------------------------------------------SS-------------------
-------------S------------------------------------------------------------------
-----------------------S-S------------------------------------------------------
-S-----------------------------S---------------------S--------------------------
------------------S----------------------S---------S-----------S----------------
----------------------------------------------------------S---------------------
------------------------------------S---S--S------S-----------------------------
S---------------------S----------------------------------S--------S----------SSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSS---------S------------------------------------------------------------
-----S---------------------S-----------S----------------------------------------
--------S---------------------------------------------S-------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------S-------------------
-----------------------------------------------S--------------------------------
--------------------------------------------------------------------------------
---------------S-----------------------------------------------------------S----
-----------------------------------------------------------S--------------------
---------------------------------------------------------------------S----S-----
------------------------------------------------------------------------------S-
-------S---------S-------------------------------------S------------------------
--------------------------------------------------------------------------------
---------------------------S-----------S-----------S---------S------------------
--------------------------------------------------------------------------------
-----------------------------------------------------------------------S--------
S------------------------------------------------------S------------------------
--------------------------------------------------------------------------------
-------------------------------S----------------------S--------S----------------
-------------S--S---------------------------S-----------------------------------
----S--S-------------------------S----------------------------S-----------------
-------------S------------------------------------------------S------------S----
---------S-------S-S--S-S---S------------S----S---------------------------S-----
----S----------------------S---S----SSSSSSSSSSSSSSSSSSSSSSSSS-----S-------------
-----S--------------S----------------------S-SSS-------------S------------------
S-S------S---S-SSS----------S------------S----------------------S---------------
---S-----S---------------S--SSSSSSS---------S--S-----------------S-S-------S---S
SSSSSSS-------SS---------S---S-S--------S----------S-----------S----------------
--S----SSSSSSSS-----------------------S------S
>forward_733
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------------------TAGTCCG
ACGAAAAAGCCCC-------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------
>reverse_2682
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------TGGACATGTCGACCTGCATT-------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------
