>input_sequence_62810
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---------------ATGGGGAGGGCGCCGTGCTGCGACAGGGCGGCGGTGAAGAGGGGCCCGTGGTCGCCGGAGGAGGA
CGACGCGCTGCGCGACTACATGCAGCGCCACGGCAACACCGGCAGCTGGATCACCCTCCCCAGCAAAGCCGGTGAGTGT-
-------------------GCTGCCCCTTTCATGTCCGTCCGTGCCTTTGCCTTTGCTCGACGCGTGGCGTGCGCGCGTG
TTCTCGATCGATCGATGATCTTTGTCTCGGGTGGGTGTGCAGGGCTGAAGAGGTGCGGCAAGAGCTGCCGGCTGCGGTGG
CTCAACTACCTCCGCCCCGACATCCGCCACGGCGGCTTCACCGAGGAGGAGGACACCATCATCTACTCCCTCTACAGCCA
GCTGGGCAGCAAGTAAGC----AC----TCTTCTCTTTCTTGATCACCAGGCGCGAAAGCGGCATCCTTTTCGTGTCCCG
GCCGGCATGACCGATCAAGACGC----------GCGCTGGCATT-----CATCGCAGGTGGTCGCTGATAGCGTCGCAGC
TGGAGCGGAGGACGGACAACGACGTCAAGAACCACTGGAACACCAAGCTCAAGAAGCGCCTCGCCGCCGCCGCCGCCGCC
TTCTCCACCGCCCCCTGCCGTCGCTCCCCGTCCTTCATGCCGCTCCCGGCGCCGGCCCCAGCGCACGCGCACCTGTCGCC
GCTTCTCCCGCTCCCCGTGCCGACCGTGAAGGCCGAGGCGTACACCTACGACGACTTCCTGGCGCCGACCGCCGGGCTGC
AGGACCCGTTCGCCGCCGAGGGCTCGTCTTCGGCCTCCGCCGCGCTCCAGGACACGTTCGCCGCCGAGGGCTCGTCCTCG
GCCTCCGCCGCGCTCCAGGACACGCTCGCCGCCGAGGGCTCGACGTCGGCCTCCGCCGCGTCGTCGGGGTCCAACTGGTC
GGCGGTGGACAACGCCGGCGGGTTCTTCGTGGACTTCTGCGCGGCCGGCCCCGACCTCGCCGCCGCAGACCAGTTCCTCG
GCGGCTTCTACTACCCTCTCGACTCGACCTTGTCACTAGTGTAG------------------------------------
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>chr3B_1_TraesCS3B01G126800
CAGGAGGAAAGCCCATCTTCTTTCGCCAGCCGTCCGTTCCACGACTGGCCCATATTCCCCCCTTCGTGCCCTTTCCTGTG
CAGGTTTTCCTGCTCCTTTTGGAACGAACTTTCCGGAGCAGAAGTGCTACTTTTTCCGTTTTGGGATTAAGCACGGGCAT
GGCGATTATGTGCGCCGATCGTCCCAAGCGGATCGCATGAGTGCGCCTTAATCATGGTGACATGGTCCTCATGGGTGAGA
GTGTGTGAGGGCGACGTCGTGTGTTGGTGTGTGTGTGTGTGTGTGTCACGGAATGATTCGTCAAAGCCAAGGAGATATCG
GTGACAAATCAAGCAAGAAGAAC----------AGAGCTGCATGGTGGATCTTCGGTGCAGTAACAAAAGCAAAAGCAAG
GTGAATCGCTCACGAAATGTAATCCTATATGCAGAGGGATCTTCAGTGCAGTAATAAACTGGAG--------TACAAAAG
CAAAAGC-AAGGTGATGTTTGAAGTTTTCACCAAAAACACACCACAAAAT------------------------------
---------------------------------AGGCAGTAAAAAGAGGC--AACATGCCAGGAACAAAAAGGAAGTAGA
GAAGTA-----AGAAAACAGCATCTGCCAGGAGAATCAACAATGTTTGTTCGGTCGCGTACAATGTTCTCTGCGTGTGAT
GAGACC------GCATGGGCCCGTGACCCAAAAGGCCAAAAGGAGACTGTGAAAGAGAGAACAACCGCTGCAGCAGCAGA
GAATCAAGGATCCAAATGGGAAACCACGCCCCGGTCGGTGCACGGCGCCCACCCCGCC-----CCTCTCTCTTCTCGACA
-CTC-TTTTTTCACCCCGGGAGTACGGTTTTTTAAAGACCGCAGGCAGAG------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------------------------GACCCTGCGG
TGTTCTGCTCTGTTCGCCGACAACGGGCGGGGTCGATACAAGTAGCGGCAGCCCATCGGCCTCAGCGC--AGCAGCGCGG
CCAGTCGTACGTCCTCGTCCGGTCTCTCTCTTCAG-----------CCTCCCCTCCCCCGTCGTCTCGTCTCTTCTCGCG
GCCGGGTCCGGGGCCATGGGGAGGGCGCCGTGCTGCGACAGGGCGGCGGTGAAGAGGGGCCCGTGGTCGCCGGAGGAGGA
CGACGCGCTGCGCGACTACATGCAGCGCCACGGCAACACCGGCAGCTGGATCACCCTCCCCAGCAAAGCCGGTGAGTGT-
-------------------GCTGCCCCTTTCATGTCCGTCCGTGCCTTTGCCTTTGCTCGACGCGTGGCGTGCGCGCGTG
TTCTCGATCGATCGATGATCTTTGTCTCGGGTGGGTGTGCAGGGCTGAAGAGGTGCGGCAAGAGCTGCCGGCTGCGGTGG
CTCAACTACCTCCGCCCCGACATCCGCCACGGCGGCTTCACCGAGGAGGAGGACACCATCATCTACTCCCTCTACAGCCA
GCTGGGCAGCAAGTAAGC----AC----TCTTCTCTTTCTTGATCACCAGGCGCGAAAGCGGCATCCTTTTCGTGTCCCG
GCCGGCATGACCGATCAAGACGC----------GCGCTGGCATT-----CATCGCAGGTGGTCGCTGATAGCGTCGCAGC
TGGAGCGGAGGACGGACAACGACGTCAAGAACCACTGGAACACCAAGCTCAAGAAGCGCCTCGCCGCCGCCGCCGCCGCC
TTCTCCACCGCCCCCTGCCGTCGCTCCCCGTCCTTCATGCCGCTCCCGGCGCCGGCCCCAGCGCACGCGCACCTGTCGCC
GCTTCTCCCGCTCCCCGTGCCGACCGTGAAGGCCGAGGCGTACACCTACGACGACTTCCTGGCGCCGACCGCCGGGCTGC
AGGACCCGTTCGCCGCCGAGGGCTCGTCTTCGGCCTCCGCCGCGCTCCAGGACACGTTCGCCGCCGAGGGCTCGTCCTCG
GCCTCCGCCGCGCTCCAGGACACGCTCGCCGCCGAGGGCTCGACGTCGGCCTCCGCCGCGTCGTCGGGGTCCAACTGGTC
GGCGGTGGACAACGCCGGCGGGTTCTTCGTGGACTTCTGCGCGGCCGGCCCCGACCTCGCCGCCGCAGACCAGTTCCTCG
GCGGCTTCTACTACCCTCTCGACTCGACCTTGTCACTAGTGTAGATCGATCGATGTGTGACGGA--------CGCGCGCA
CGTCCTCGTGACCGATCGATCAAACGTGTTATCCC----AAGTACTCGATCTCCATGAGCAAATTCAGATACAAGCTCGG
GTTGCCACCTGAAAAGGTGATCTTCGTATGCTTGGAAACTTG-AAATGTGGTTCTTGAATCTTGATCACATCGATTA-CA
TGCTTCCATGCCCATGTTTTGTCTTCTCAAGTGTATGCAGTTCTTTGAACAGAAATTTTGTGCCGCTAATCCTGATCTTT
TCCTAGATGATCAATCGCGCGCGCGCG------------------CACACACACACACACATGTAACTTGTTGGCGTCCA
TGTGAAAGGCCGTGGACGCTGCACGCAATTCGCATGGGCCGGGCGAGGGTGGCAAAGAAGATGAGCCATGACCGATCTGA
AGATTCGCTTCCGTCCCTGCATGATGTGCGCCGGGTCGGGTCGGTCGGT---------CGCCAAGTGGTCGATAAGTAAC
ACCAAAAAGCAGTCCATGGAAAAAATCGGTAAAGCCGGAGAGACAGCCATGGCCCACGCCAAGAACAAAATTGGCTGGGG
TGATGACTGATTAGCGCAGGGCTAATGACGACGCTTGTGTGATGATAGAGGCACATA------TTTTTTCTGCTTCGCAG
CCTCCGGTTGATTGATGACAGGTCGCGCGCGCAAGTAAATGCTTCTTTTTTAC--AGGGTCTATATTATCCTTGCTTGAC
TGCCAGAAACTGGACAATTTGCGGTACATCCATTGGAGG-TAGTACGATCCTTTTATCCGCAGAAGATAATTAGAAGGGC
TGAGAGATGATGATGATG---------GATCAAAGTGGCCTGGCATGAACAGCAACCAACGTAGGCCCGGCCGCAGTACT
-GGGCCGTTTCGGATTTGTCAGGAGAATCATCTCGGAGCAGTGCGATGCTCATCCCTGCCATGCCAGTTCTTGTCGTGTC
GACGGAAGCTCGAAAGCGAAACAG-AAAGGAAAGTCGACGTGGACGGAGCCGGAGACGTCCATCA
>chr3A_1
CAGGAGGAAAGCCCATCTTCTTTCTCCAGCCGTCCGTTCCACGACTGGCCCATATTTCCCCCTTCGTGCCCTTCCCCGCG
CAGTTTTTCCTGCTCCTTTTGGAACGAACTTTCCGGAGCAGAAGTGCTACTTTTTCCGTTTTGGGATCAAGCACGGGCAT
GGCGATTATGGGCGCCGATCGTCCCAAGCGGATCGCATGAGTGCGCCTTAATCATGGTCTTCA-----------------
-TGGGTGAGGTCGACGTC------------GTGTGTGTGTGTGTGTCACGGAATGATTCGTCAAAGCCAAGGAGATATCG
GTGACAAAATGAGCAAGAACAACAGAGGTGCTGAGAGCTGCATGGTGGATATTCGGCGCAGTAACAAAAGCAAAAGCAAG
ATGAATCGCTCACGAAATGTAATCCTGTATGCAGAGGGATCTCCAGTGCAGTAATAAACTAGTAATAAATTATACAAAAG
CAAAAACAAAGGTGATGTTTGAAGTTTTCACCAAAAACACACCCCGAAAT------------------------------
-------------------------------ACAGGCAGTAAAAAGAAGT--AACATGCCAGGAAAGAAAAAGGAGGTAT
AGTACAGTAGTAAAAAACAGCAGCTGCCAGGAGAATCAACAATGTTAGTTCGGTCGCGTACAAAGTTCTCTGCGTGTGAT
GCGACCACATCGACATGGGCCCGTGACCG-------CAAAAGGGGACTGTGAAAGAGAGAACAACCGCTGCAGCTGCAGA
GAATCAAGGATCGAAATGGGAAGCCACGCCCCGGTCGGTGCACGGCGCCCACCCCGCCCCGCCCCTCTCTCTTCTCGAAC
GCTC-TTTTTTCACCCCGGGAGTACGGTTTTTTTAACAGTTTTGCTAGAACTCATTTAGATGAGATTTAATTTGATCTCA
TTCATCTTTTATAGCCATTGAATGTGGTGCTATAAGATGCGTGTGTGTTGACGTGGGTTGTATCCGTTCTTGTTTTCCAG
ATGAATGAGACAAAATTACGTCTCATCTAGATGAGTTCTAAGTACTTCTTTTTTTAAAGACCAGAGGACCGAGCCTGCAG
TGTTCTGCTCTGTTCACCGACGACGGGCGGGATCGATACAAGTAGCGGCAGCCATCGGCCT-----------CAGCGCGG
CCAGTCGTACGTCCTCGTCCAGTCTCTCTCTCCAGCCTCCCCGTGTCCTCCCCTTCCCCGTCGTCTCGTCTCTTCTCGCG
GCCGG-TCCGGAGCCATGGGGAGGGCGCCGTGCTGCGACAGGGCGGCGGTGAAGCGGGGCCCGTGGTCGCCGGAGGAGGA
CGACGCGCTGCGCGACTACATGCAGCTCCACGGCAACACCGGCAGCTGGATCACCCTCCCCAACAAAGCCGGTGAGTTCG
CGCGCTCGCCCGCCCGCTCGCTGCCCCTTCCATGCCAGGCCGTGCCTTTGATC--------------------------G
TTCTTGATGGGTGCTTGATCGTTCT------------TGTAGGGCTCAAGAGGTGCGGCAAGAGCTGCAGGCTGCGGTGG
CTCAACTACCTCCGCCCCGACATCCGCCACGGCGGCTTCACCGACGAGGAGGACACCATCATCTACTCCCTCTACAGCCA
GCTCGGCAGCAAGTAAGC----ATCGATTCTCTTCTTTCTCGATCATCAGGCGCGTAAGCGGCATCCTTTTCGTGTCCCG
GCCGGCATGACCGATCGAGACGGACGCGC------------ATTCATCGCATCGCAGGTGGTCGCTGATCGCGTCGCAGC
TGGAGAGGAGGACGGACAACGACGTCAAGAACCACTGGAACACCAAGCTCAAGAAGCGCCTCGCCGCCGCCGCCGCCGCC
TTCTCCACC---------CGCCGCTCCCCGTCCTTCATGCCGCTGCCGGCGCCGGCCCCAGCTCACGCGCACCCGTCGCC
GCTGCTCCCGCTCCCCGTGCCGACCGTGAAGGCCGAGACGTACACCTACGACGACTTCCTGGCGCCGACCGCCGGGCTGC
AGGACCCGTTCGCCGCCGAGGGCTCGTCTTCGGCCTCCGCCGCGCTGCAGGACCCGTTCGCCGCGGAGGGCTCGTCCTCG
GCCTCCGCCGCGCTCCCGGACACGCTCGCCGGCGAGGGCTCGACGTCGGCCTCCGCCGCGTCGTCGGGGTCCAACTGGTC
GGCGGTCGACAACGCCGGCGGGTTCTTCGTGGACTTCTGCGCGGCCGGCGCCGACCTCGCCGCCGCGGACCAGTTCCTCG
GCGGCTTCTACTACCCTCTCGACCCGACCCTGTCACTAGTGTAGATCAACCGATCGACGCGC----CACGCGCGTGCGCG
CGTCCTCGTGACCGATCGATCAAACGTGTTTGTTATCAAAAGCACCCGATCTTCATGAGTAAATTCAGATACAAGCTCCG
GTTGCCACATGAGAAGGTGATCTTCGCACGGTTGGAAACGTGAAAATGTGCTTCTTGAATCTTGATCACTATGATTCGCA
TGCTTTCATCTCCACGTTTCT-----TCACTATG-TGCAGTTCTCTGAGCAGAAATTTGTGCCACTTATCCTAA--CTTC
TCCTAGATGATCAATCCTACACACACACACACACACACACACACACACACACACACACACATGTAGCTTGTTGGCGTCCA
TGTGAGAGGCCGTGGTCGTCGCACGCAATTCGCATGGGCCGGGCGAGGGCGCCAAAGAAGATAAGCCATGACCGATCTGA
AGATTCGCTTCCGTCGCTGCATGATGCGCGCCGGGTCGGGTCGGTCGCCAAGTGGTC-----------------------
-------------------GAAAAATTCGTAAAGCTGGGCAGACAGGCATGGCCCACGCCAAGAACAAAATTGGCCGGGG
TGATGGCTGATTAGCGCAGGGCTAATGACGACGCTTGTGTGATGATAGAGGCGCATCTTTCTTTTTTTTCTGGTTCGCAG
ACTCCGACTGATTGATGACAGGTCGCGCGCGCAAGTAAATGCTTCTTTTTTACAGAGGGTCTATATTATCCTTGCTTGAC
TGGCAGAAAGAA-ACAATTTAC-GTACATCGACTGGAGGATAGTACGATCCTTTTATCTGCAGAAGATAATTAGAAGGGC
TGAGAGATGATAATGATGATGATGGAGGATCAAAGTGACCTGGCATGAACAGCAACTGATGTGGGGCCGGGGGCGACATT
GGGGCCGTTTCGGATTTGTCAGGAGAATCATCTCGGAGCAGTGCGATGCTCATCCCTGCCGCGCCAGTTCTTGTCGTGTC
GATGGAAGCTCGAAAGCAAAACCAAAAAAGGAAGCCGACGTGGACGGAGCGGGAGGCGTCCATCA
>chr3D_35
----------------------------------CGTTCCACGACTGGCCCATATTTCCCCCCTCGTGCCCTTTCCTGCG
CAGGTTTTCCTGCTCCTTTTGGAACGAACTTTTCTGGGCAGAAGTGCTACTTTTTCCCTTCTGGGATGAAGCACGGGCGT
GGCGATTATGTGCGCCCATCGTCCCAAGCGGATCGCATGAGTGCGCCTTAATCATGG------------------TGAGA
GTGTCTGAGGGCGACGTCG----------------TGTGTGTGTGTCACGGAATGATTCGTCAAAGCCAAGGAGACACCG
GTCACAAAATAAGCAAGAACAACAGAGGTGCTGAGAGCTGCATGGTGGATATTCGGCGCAGTAACAAAAGCAAAAGCAAG
GTGAATCGCTCACGAAATGTAATCCTGTATGCAGAGGGATCTTCAGTGCAGTAATAAT---------AATTATACAAAAG
CAAAAGC-AAGGTGGTGTGTGAAGCTTTCACCAAAGGCACACCAGACGGACGCTTCAACCCGAGTCTTGCAAGGCCGAGC
GAAGCTTTCACCCCCACAAATCCTCTACGAAACAGGCAGTAAAAAGAAGTGTAACATGCCAGGAAGAAAAAGGAAGTCTA
GTAGTA-----AAAAAACAGCATCTGCCAGGAGAATCAACAATGTTGGTTCGGTCGCGTACAATGTTCTCTGC-------
----CC------ACATGGGCCCGTGACC--------CAAAAGGGCACTGTGAAAGAGAGAACAACCGCTGCAGCAGCAGA
GAATCAAGGATCGAAATGGGGAACCACGCCCCGGTCGGTGCACGGCGCCCACGCCACCCCACCCCTCTCTCTTCTCGACG
-CTCTTTTTTTCACCCCGGGAGTACGGTTTTTTAAAGACCGCAGGCAGAG------------------------------
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----------------------------------------------------------------------GACCCTGCAG
TGGTCTGCTCTGTTCACCGACGACGGGCGGGGTCGATACAAGTAGCGGCAGCCCATCGGCCTCAGCGCAGAGCAGCGCGG
CCAGTCGTACGCCCTCGTCCGGTCTCTCTCTTCAG-----------CCTCCCCTCCCCCGTCGTCTCGTCTCTTCTCG--
-----------GGCCATGGGGAGGGCGCCGTGCTGCGACAGGGCGGCGGTGAAGCGGGGCCCGTGGTCGCCGGAGGAGGA
CGACGCGCTGCGCGACTACATGCAGCGCCACGGCAACACCGGCAGCTGGATCACCCTCCCCAACAAAGCCGGTGAGTTCG
CGCGCTC------------GCTGCCCCTTCCATGCCCGGCCGTGCCTTTGATC--------------------------G
TTCTTGATGGGTGCTTGATCGTTCT------------TGTAGGGCTCAAGAGGTGCGGCAAGAGCTGCAGGCTGCGGTGG
CTCAACTACCTCCGCCCGGACATCCGCCACGGCGGCTTCACCGACGAGGAGGACACCATCATCTACTCCCTCTACAGCCA
GCTCGGCAGCAAGTAAGCATCGAC----TCTTCTCTTTCTCGATCACCACGCGCGGAAGCGGCATCCTTTTCGTGTCCCG
GCCGGCATGACCGATCGAGACAGACGCGCGCTGGCGCTGGCATTCATCGCATCGCAGATGGTCGCTGATCGCGTCGCAGC
TGGAGCGGAGGACGGACAACGACGTCAAGAACCACTGGAACACCAAGCTCAAGAAGCGCCTCGCCGCCGCAGCCGCCGCC
TTCTCCACC---------CGACGCTCCCCGCCCTTCATGCCGCTGCCGGCGCCGGCCGCAGCGCACGCGCAGCCGTCGCC
GCTGCTCCCGCTCTCCGTGCCGACCGTGAAGGCCGAGGCGTACACCTACGACGACTTCTTGGCGCCGACCGCCGGGCTGC
AGGACCCGTTCGCCGCGGAGGGCTCGTCTTCGGCCTCCGCCGCGCTCCAGGACCCGTTCGCCGCAGAGGGCTCGTCCTCG
GCCTCCGCCGCGCTCCATGACACGCTCGCCGCCGAGGGCTCGACGTCGGCCTCCGCCGCGTCGTCGGGGTCCAACTGGTC
GGCGGTCGACAACGCCGGCGGGTTCTTCGTGGACTTCTGCGCGGCCGGCCCCGACCTCGCTGCCGCGGACCAGTTCCTCG
GCGGCTTCTACTACCCTCTCGACCCGACCCTGTCACTAGTGTAGATCGATCGATCGTTCGATGTGTCACGCGCGTGCGCG
CGTCCTCGTGACCGATCGATCAAACGTGTTCGTTATCAAAAGCACCCGATC-----------------------------
-----------------------------------AAACGTGAAAATGTGGTTCTTGAATCTTGATCACCTCGATTTGCA
TGCTTCCATGTCCACGTTTCT-----TCAAGTGTATGCAGTTCTTTGAGCAGAAATTTTGTG------------------
----------------------ACACATACACACACACACACACACACACACACACACACATGTAACTTGTTGGCGTCCA
TGTGAAAGGCCGTGCACGCTGCACGCAATTCGCATGGGCCGGGCGAGGGCGCCAAAGAAGATGAGCCATGACCGATCTGA
AGATTCGCTTGCGTCGCTGCATGATGCGCGCCGGGTCGGGTCGGTCGCCCGCCCCGCCCGCCAAGTGGGCGATGAGCAGC
ACCAAAAAGTAGTCCATGGGAAAAAATGGTAAAGCCGGAGAGACAGGCATGGCCCACGGCAAGAACAAAATTGGCTGGGG
TGATGACTGATTAGCGCAGGGCTAATGACGACGCTTGTGCGATGATAGAGGCACATCTCT-TTTTTTTTTTGGTTCGCAG
ACTCCGATTGATTGATGACAGGTCGCGCGCGCAAGTAAATGCTTCTTTTTTACAGAGG--CTATATTATCCTTGCTTGAC
TCGCAGAAACAAGACAATTTAC-GTACGATCAT------------------TTTTATCTGCG---GATAATTAGAGGGGC
TGAGAGATGATGATGATG---------GATTAAAGTGACCTGGCATGAACAGCAACTGATGTAGGGCCGGCCGCAGTATT
GGGGCCGTTTCGGATTTGTCAGGAGAATCATCTCGGAGAAGTGCGATGCTCATCCCTGCCACGCCAGTTCTTGTCGTGTC
GATGGAAGCTCGAAAGCAGAACAGAAAAAGGAAGCGGACGTGGACGGAGCGGGAGCCGTCCATCA
>SNPs
------------------------S-------------------------------S---------------------S-
-------------------------------------------------------------------S------------
----------------------------------------------------------SSSSSSSSSSSSSSSSS-----
-------------------SSSSSSSSSSS--------------------------------------------------
--------SS---------S------------------------------S-----S-----------------------
--------------------------S---------------------------------S-SS----------------
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-----------------------------------------------S-S---------------S-----------SS-
-S----------S---------------------------------S---------------------------------
-S----------S---------------SSSSSSSS-------S------------------------------------
------------S------------------------------------------------------------------S
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------------------------------------------------------------------------------S-
---------------S-----S----------------------------------------------------------
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-----S------------------------------------------------S-------------------------
--------------------------------------------------------------S--------------SS-
-----------------------------S----S---S-----------SSSSSSSSSSSSSSSSSSSSSSSSSSSSS-
----S---S-S-SSS-----S--S-SSSSSSSSSSSS--S------S---------------------S-----------
--------------------------------------------S-----------------------------------
---S------------------------------------S--------------S------------------------
----------------S-----S----------------------------------------------S----------
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---------SSSSSSSSS--S-----------------------S----------------------------S------
---S----------------------------------------------------------------------------
-----------------------------------------------------S----------S---------------
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------S-----------------------------------------------------------S-------------
-----------------------S-----S------------------------SSS--SSS-S----------S----S
------------------------------SSSSS-------S--S------S------S------------------S-
--------S---S-------------S-S-S--------S-----------------------------S------S---
----------S---S----SSSSSSS----------------------S--------------SSS--SS-SSSSS---S
----------------SSS-S-S-S-S-----------------------------------------------------
-------------------------------------------------S-S----------------------------
---------------S----------S--------------------SS-------------------S----S--S-S-
---------S---------S------S-------------------S---------------------------------
--------------------------------------------------------S---------------S-------
S-----S-------------------------------------------------------------------------
--S-------SS--------S-S-----------------------------------S---------------------
-------------------------------------S------------------SS-S-----S------------S-
-------------------------------------------------------------S------------------
--S--------------S----------S-S---S---------------S----S---------
>forward_371
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-------------------------------ACAGAGCTGCATGGTGGATC-----------------------------
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>reverse_1736
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-------------------------------------------------------AAAGCGGCATCCTTTTCGTG-----
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>forward_377
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-------------------------------------CTGCATGGTGGATCTTCGGT-----------------------
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>reverse_2557
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----------------------------------------------------------------------------ACAT
GCTTCCATGCCCATGT----------------------------------------------------------------
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