>input_sequence_62807
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----------------------------------------ATGGAAGAAGAGGAGGCAGAGTTCGGTAAGCTACAAGGCA
TACCGATGAGGTTCACGTTTCAACAGTTAGAAGTGGCAACCGAGCAGTTCAAAGACAAGCTTGGGGAAGGAGGATTTGGT
TCTGTTTTCAAGGGACGGCTAGGTGAGGAAAGGATTGCGGCAAAACGCTTGGATCGAGCTGGTCAAGGAAAGAGAGAATT
CTTAGCAGAGGTTCAGACAATTGGCAGCATTCATCATATCAATCTGGTGAGACTGTTTTGTTTCTGTGCAGAGAAAACCC
ATAGGCTCTTGGTTTATGAGTATATGCCAAAAGGATCCTTGGACAAGTGGATCTATTGTCGACATGACAACACTGGTCCT
CCGTTAGAATGGAGAGTGCGATGCAAGATTATCACGAACATAGCTAAGGGTCCCTCTTATCTTCATGAGGACTGCATGAA
GAGAATTGCTCATTTGGATATCAAACCACAAAATATTCTCATAGATGAGGACTTCAATGCTAAACTTTCTGATTTTGGTT
TGTGCAAGCTCATGGATAGGGACATGAGCCAAGTGGTTACTAGAATGAGAGGCACACCTGGATATTTAGCTCCTGAATGG
TTGAGATCACAAATCACGGAGAAGGCCGATATCTATAGCTTTGGCCTGGTGGTCATGGAAATTGTGAGCGGAAGAAAGAA
CCTTGACACTTCCCGGTCCGAAGAGAGCATCCATCTTATTACCCTATTGGAAGAAAAGGTGAAGAACAATCAGTTGGTAG
ATTTGATTGACAAGAACAGTAATGACATGCAAGCACACGAGCAGGATGTAATTCAGATGATGAAGCTAGCAATGTGGTGT
TTGCAGATCGATTGCAAAAGAAGGCCTAAAATGTCCGAGGTAGTCAAGGTCTTGGAAGGTACCATGGATGCAGAGAGCAA
TATAGATCACAACTTTGTTGCAACAAACCAAGCAAATTTTGGCATTGCTGGTAATGTGACCTCCTCGGCTCCACCTCTAG
CCTCACATCTATCAGGCCCCAGGTGA------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------
>chr3A_1_TraesCS3A01G015300
TCAATTAGCTTTTGTGTTGTAAGATGTAGATTCTACACTAGTCGCTCCCTAATTAACCAATATAATATGATGAATCACAT
CAGATCATCCAATAATTGGCAATGTAGCAGTTGGAATGGAAGGTGTGCATAGATGTTGCTGTTGCTTACTTTGCACTGCA
GCTCGTATGATATATTCCCATCCTCTTCCTTGAGGACAGGTGGCATACTGCTTGTGTGTCCCTATTCCCTGCTGAAGAAC
TCAGCGTCAAATTGTTGCACGAATGATTAATTGACGCTGGAGTTAGTTGGTTACCTCAGTGGACGAGGGTTGGCGGGAGC
TGAGGCCAAAGAAGACGGCGGTGAGGCTTCTCCAGAGGCCGGCGATTTGGAGCGGCCCGGGCGGCGCGCGCGCCTGCAGA
TGGGTAGGGGTGGAAAGTTGTGCTACTGTGGACTGGGGAGGGAGGATTCCGCGGCGAGTGATGGCGGCGGATTAATACTA
GACGTGAACCACGGTCCAGTTCGCCGGCGCCGGCACCGCTGATGGGGACACCGCCGTGGGAATGGGGGGTTAGGACGGCC
AAGTAGTCCAGTGCGTAGACGAGCCCACTAAATCTTCGTTAGCTCGGCCGTAGACCTGGCCGTGTAACTTTAATCGAACA
GCCGGTGGATATTCATCCTCGGCAACCTTGCGGGCGGATGCAGCCGCGGGCAATTTGAACATCATTCAAATTGGCAGGCT
CCCTACCCTGCCCAAAGAAAGTCATCCTCCAACTCCCGAGCAGAATACATATCAAATGTGCATGCGCAGCTTGTCTTGAA
GCTGTGTAATATGCTCAAACAATGCCTCATGACACATATTTTTGCCTCTCTTTTTTGGGGCCACAAGCACAGGACCTTCA
TTCAGAAAAGTAGGCACGGCTGTTCGGATTGCAACTGCAGGTTCCTTAGCCAGTTTCATTTTAATTGTCGCATTCGTCCT
TTTTGTCATACACAGAAGGAGAACACGACGACACCATGAGATGGAAGAAGAGGAGGCAGAGTTCGGTAAGCTACAAGGCA
TACCGATGAGGTTCACGTTTCAACAGTTAGAAGTGGCAACCGAGCAGTTCAAAGACAAGCTTGGGGAAGGAGGATTTGGT
TCTGTTTTCAAGGGACGGCTAGGTGAGGAAAGGATTGCGGCAAAACGCTTGGATCGAGCTGGTCAAGGAAAGAGAGAATT
CTTAGCAGAGGTTCAGACAATTGGCAGCATTCATCATATCAATCTGGTGAGACTGTTTTGTTTCTGTGCAGAGAAAACCC
ATAGGCTCTTGGTTTATGAGTATATGCCAAAAGGATCCTTGGACAAGTGGATCTATTGTCGACATGACAACACTGGTCCT
CCGTTAGAATGGAGAGTGCGATGCAAGATTATCACGAACATAGCTAAGGGTCCCTCTTATCTTCATGAGGACTGCATGAA
GAGAATTGCTCATTTGGATATCAAACCACAAAATATTCTCATAGATGAGGACTTCAATGCTAAACTTTCTGATTTTGGTT
TGTGCAAGCTCATGGATAGGGACATGAGCCAAGTGGTTACTAGAATGAGAGGCACACCTGGATATTTAGCTCCTGAATGG
TTGAGATCACAAATCACGGAGAAGGCCGATATCTATAGCTTTGGCCTGGTGGTCATGGAAATTGTGAGCGGAAGAAAGAA
CCTTGACACTTCCCGGTCCGAAGAGAGCATCCATCTTATTACCCTATTGGAAGAAAAGGTGAAGAACAATCAGTTGGTAG
ATTTGATTGACAAGAACAGTAATGACATGCAAGCACACGAGCAGGATGTAATTCAGATGATGAAGCTAGCAATGTGGTGT
TTGCAGATCGATTGCAAAAGAAGGCCTAAAATGTCCGAGGTAGTCAAGGTCTTGGAAGGTACCATGGATGCAGAGAGCAA
TATAGATCACAACTTTGTTGCAACAAACCAAGCAAATTTTGGCATTGCTGGTAATGTGACCTCCTCGGCTCCACCTCTAG
CCTCACATCTATCAGGCCCCAGGTGAAATGAGACAGTCCTGAC-AAGATAGGCAATTAGATTATGAGCAGGACAGGAGAT
TTGCTTATGTAAGGCAAATGTC-ATGCCTGTTGTATACT--TGTATCTTCTCAAATTACTATAAACCGAAGCCCCTTGTC
TCGAGTTAATTTTATCTGTAAAATACTTCAACATTGCAAACCTTGTTGTTCTGCAACAGCTGGACTGAATTTATTCATTG
GA-ATGTTCAG-TTTCTCTCTGTAATGCAAATCTCTTTTTAGATTGTGTTGTGCTTAGTATTGCAATTGTAAATATCGGA
TCTCCAACTCAATCAGCATTCTGGTAATAATAGAGTGTATGGTATTAGTGAGATTCTCCATGTACTGCTCCCTCCCAGTT
ACCACCATGCATGCTA-----------------------TACTGAATATTAGTGAGATTTGAAGAGAATTCGAAAATGAA
TAGCACTAGCCGGGAGGTGCATG---------------------------------------------------------
-------------------CATGAGAAGTTGCTGCATACCATTTAGATTTAGTGACACTCGTGGGACTCCTGAATGAATT
AGTCCTCGGTACCAGCAGCGAGCGATGGATTGGTTGGTGAATCGTGGCCAACTTCCAGAAGAAAGGAAGAGGAGGAAGCT
TCACCTTTCCCGGTGCGGTGGCGGAGGACGAGGTCAACA----------------------------------------G
CAGATGGGCAAGCGTG----GCGGCCTGCCACAGGAAGCGCACGGGCTTACTGGAAGCCATTGGGGCCCCTGTAGGAGGT
TTGCAGCAGCCTATAGGAGATGGAGCTAACCGCGCACGGTGTCTCAAAAAAAACTACTCACGCACGAGTCCCTCAAAAAA
AGAAACGCTAATCACGCACGGAATTGTCCCCCGTAGGAGAGGCAGCTAATCACGGGCGTAGGCAGAACATGCAGACGCAG
CCTTCTAAGGATTCCGATCTTGCGAGTTCTCCAATCTAGCCCGCGTCCCTGTACTCCTTTTTTTCTTCCTAATTTTCGAT
CGCTAGTTTGCCAAACCTAATTCCCAGAAGCTGATTTTGAGTCAGAGATGCTACA
>chr3D_858
GGGCCAT-------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------------------CAAGCACAGGACCCTCA
TCCAAAAAAGTAGACACAGTTGTTTCAATTGCAATTACAGGGTCTGTAGTCAGTTTCATTTTAACTACCGCATTCATCCT
TTTCGTCGTACATCGAAGACTGACACGACGATGCCATGAGATGGAGGAAGAGGAGGCAGAGTTCGGTAAGCTGCAAGGAA
CACCGATGAGGTTCACGTTTCAACAGTTAGATGTGGCAACCGAGCAATTCAAAGACAAGCTTGGGGAAGGAGGATTTGGG
TCTGTTTACAAGGGACGGCTAGGTGAGGAAAGGATTGCGGTAAAACGTTTGGATCGAGCTGGACAGGGAAAGAGCGAATT
CTTGGCAGAGGTTCAGACAATCGGCAGCATTCATCATATCAATCTGGTGAGGCTGTTTGGTTTCTGCGCTGAGAAATCCC
ATAAGCTCTTGGTTTATGAGTATATGCCAAAAGGATCATTGGACAAGTGGATCTACTGTAGACATGACAATACTGCTCCT
CCACTAGAATGGAAGGTACGATGCAAGATTATTACTAACATAGCTAAGGGTCTCGCTTATCTTCATGAGGAGTGCATGCA
GAGAATTGCTCATTTGGATGTCAAACCACAAAATATTCTCATAGATGACGACTTCAATGCTAAAATTTCTGATTTTGGTT
TGTGCAAGCTCATAGATAGGGACATGAGCCAAGTGGTTACTAGAATGAGAGGCACACCTGGATATTTAGCCCCTGAATGG
TTGACATCACATATCACGGAGAAGGCCGATGTCTATAGTTTCGGCGTGGTGGTCATGGAAATCGTCAGTGGAAGAAAGAA
CCTTGACACTTGCCGGTCCGAAGAGAGCATCCATCTTATTACTCTATTGGAAGAAAAGGTGAAGAACGGTCACTTGGTAG
ATTTGATTGACAAGAACAGTAATGACATGCAAGCACACGAGCAGGATGTAATCCAGATGATGAAGCTAGCAATGTGGTGC
TTGCAGATCGATTGCAAAAGAAGGCCTAAAATGTCCGAGGTAGTGAAGGTCTTGGAAGGTACCATGGATGCAGAGAGCAG
TATAGATCACAACTTTGTTGCAACACACCAAGCGAATTTTGGCATTGCTGGAAATGTGAACTCCTCGGCTCCACCTGTAG
CCTCACATCTATCAGGCCCCAGGTGAAATGGGACAATCCTGAC-AAGACAGGCAATTAGATTATGAGCAGTACAGGAGAT
TTTCTTATGTAAAGCAAATGAT-ATGTTCATTGTATACTTGTGTAACTTGTCATATTACTACAATCTGACGCCCCTTGTG
TCGAGTTAATTTTACCTGCAAAATACTTG----------------TAGTTGTACAGCAGCTGGACTGAATTTATTCATTG
GA-ATGTTCGG-TTTCTCTATGTAATGCAGGTCTGTTTGTAGAT------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------
>chrUn_858
GGGCCAT-------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------------------CAAGCACAGGACCCCCA
TCCAAAAAAGTAGACACAGTTGTTTCAATTGCAATTGTAGGGTCTGTAGTCAGTTTCATTTTAACTGCAGCATTCATCCT
TTTCGTCGTACATCGAAGACTGACACGACGATGCCATGAGATGGAGGAAGAGGAGGCAGAGTTTGGTAAGCTGCAAGGGA
CACCGATGAGGTTCACGTTTCAACAGTTAGATGTGGCAACCGAGCAATTCAAAGACAAGCTTGGGGAAGGAGGATTTGGA
TCTGTTTACAAGGGACGCCTAGGTGAGGAAAGGATTGCGGTAAAACGTTTGGATCAAGCTGGACAAGGAAAGAGCGAATT
CTTGGCAGAGGTTCAGACAATCGGCAGCATTCATCATATCAATCTGGTGAGGCTGTTTGGTTTCTGTGCTGAGAAATCCC
ATAGGCTCTTGGTTTATGAGTATATGCCAAAAGGATCATTGGACAAGTGGATCTACTGTCAACATAACAATACTGCTCCA
CCATTACAATGGAGGGTGCGATGCAGGATTATTACTAACATAGCTAAGGGTCTCTCTTATCTTCATGAGGACTGTATGAA
GAGAATTGCTCATTTGGATGTCAAACCACAAAATATCCTAATAGATCACGACTTCAATGCTAAAATTTCTGATTTTGGTC
TGTGTAAGCTCATTGATAGGGACATGAGCCAAGTGGTTACTAGAATGAGAGGCACACCTGGATATTTAGCTCCTGAATGG
TTGACATCACATATCACGGAGAAGGCCGATGTCTATAGTTTCGGCGTGGTGGTCATGGAAATCGTCAGTGGAAGAAAGAA
CCTTGACACTTCCCGTTCCGAAGAGAGCATCCATCTTATTACCCTATTGGAAGAAAAGGTGAAGAACGGTCACTTGGTAG
ATTTGATTGACAAGAACAGTAATGACATGCAAGCACACGAGCAGGATGTAATTCAGATGATGAAGCTAGCAATGTGGTGT
TTGCAGATCGATTGCAAAAGAAGGCCTAAAATGTCCGAGGTAGTGAAGGTCTTGGAAGGTACAATGGATGCAGAGAGCAA
AATAGATCTTAACTTTGTTGTAACAAACCAAGCGAATTTTGGCGTTGCTGCAAATGTGACCTCTTCGGCTGCACCTCTAG
CCTCACATCTATCAGGCCCCAGGTGAAATGAGAGAATCCTGAC-AAGATAGGCAACTAGATTATGAGCAGTACAGGAGAT
TTGCTTATGTAAAGCAAATGAT-ATGTTTATTGTATACTT---------CTCAAATTACTACAATCTGATGCCCCTTGTG
TCGAGTTAATTTTACCTGCAAAATACTTG----------------TAGTTCTACAGCAGCTGGACTGAACTTATTCGTTG
GA-ATGTTCAGTTTTCTCTATGTAATGCAGGTCTGTTTGTAGATTAACTAATGTAGGTCTGTTTCTAGTCATTGTGATAG
AAATTAACAGCATGTTCTAAAATGCTAGAAACAGCTGAACTGAATTTGTTCACTAGAATGTTCAGTTTATGCAATGTAAT
GCAGGTATGTTTTGAGATCAACTAACTCGGCTATTTTACTAGTCATTGTGATTGGGATTAACAACATGTTCCAAAATGCC
CTGGACTAACTAACACGGATCAGTTAGGAACCACAAGCTCTTTTAGTTTTAAGTTCTCCCAGACCAGTTGCATCAGCAGG
GATACCACAAGCTGTTTGACATGAGAAGTTTGTGCATACCATTTAG----------------------------------
--TCCTCAGTACGAGCAGCGAACGATGGATTGGTCGGTGAATCATGGCGAGCTTCCAGAAGAAAGGAAGAGGAGGAAGGA
TCACCTTTCCCGATGCGGTGGCGGAGGAGGAGGTCGACGGCAGCGGCAGTAGAAAGTAGGTGCTGTGGCGGTGGAATTTG
CAGATCGGGAAGCGTGCGTGGCGGCCTGCCACAGGAAGCGCACGGGCTTACTAGAAGCCATTG-----------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------
>chr3B_858
GGGCCAT-------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------------------CAAGCACAGGACCCTCA
TCCAGAAAAGTAGACATAGTTGTTCCGATTGCAATTGTAGCTTCCATAGTTAGTTTCATTTTCATTGTCGCATTCGTCCT
TTTCGTCATACATCAAAGAAGGACACGACGACGCCATGAGATGGAGGAAGAGGAGGCAGAGTTTGGTAAGCTACAAGGAA
CACCAATGAGGTTCACGTTTCAACAGTTAGAAGTAGCGACCGAGCAATTCAAAGGCAAGCTTGGGGAAGGAGGATTTGGG
TCTGTTTTCAAGGGACAGCTAGGTGAGGAAAGGGTTGCAGTAAAATGTTTGGATCGAGCTGGTCAGGGAAACAGAGAATT
TTTGGCAGAGGTTCAAACAATAGGCAGCATTCATCATATCAATCTAGTGAGGCTGTTTGCTTTCTGTGCTGAGAAATCCC
ACAGGCTCTTGGTATACGAGTATATGCCCAAAGGATCCTTGGATAGGTGGATCTATTGTCGACCTGACGATGATGCTCCT
CCTCTAGATTGGAGCACACGATGCAAGATAATCACTAACATAGCTAAGGGTCTCTCTTATCTTCATGAGGAATGCGTGAA
GAGAATTGCTCATTTGGATGTCAAGCCACAAAACATCCTCATAGATGACAACTTCAATGCCAAAATTTCTGATTTTGGCC
TATGTAAGCTCATTGATAGGGATATGAGCCAAGTGGTTACTAGAATGAGAGGGACACCTGGATACTTAGCTCCTGAATGG
TTGACATCACAAATCATAGAGAAGGCTGACGTTTATAGCTTTGGCATTGTGGTCATGGAAATCATCAGTGGAAGAAAGAA
CCTCGACACTTCCTAGTCTGAAGAGAGCATCCATCTTATTACTCTACTGGAAGAAAAGGTGAAGAACGGTTACTTGGTAG
ACTTGATGGACAAGAGCAGTAACGACATGCAAGCACATGAGCAAGACATAATTCAGATGATGAAGCTCGCCATGTGGTGT
TTGCAGATTGACTTCCAAAGAAGGCCTAAAATGTCAGAGGTAGTCAAAGTCTTGGAAGGTAGCATGGATGCTGAGAGCAA
TATAGATCATAACTTTGTTGCAACAAATGAAGCAAATTTCTATATTGCTGGAAATGTGAAATCCTCTGCTCCACCTATAG
CCTCAGATCTATCAGGTCCCAGGTGAAATGAGATAATCCCAACAAAGACAGCCAGCCCGATCATGAGCAGAA-A------
--TGTTCTGAAAGGAAAAAAAA-CATATCTA-------T--TGTATCTTTCCAAATTAGTACAATCAGAATCCCCTTATC
TTGAGTTAATTTTACCTTCAAAATGTTTTGATATTGCAAACCTTCTTGTTCTACAGCAGAACAACTCATTGTATTCCATA
CTGATGTTCAG-ATTCTCTTTGTAATGCA---------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------
>chr3B_858
GGGCCAT-------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------------------CAAGCACAGGACCCTCA
TCCAGAAAAGTAGACATAGTTGTTCCGATTGCAATTGTAGCTTCCATAGTCAGTTTCATTTTCATTGTCGCATTCATCCT
TTTCGTCATACATCAAAGAAGGACACGACGACGCCATGAGATGGAGGAAGAGGAGGCAGAGTTTGGTAAGCTACAAGGAA
CACCAATGAGGTTCACGTTTCAATAGTTAGAAGTAGCGACCGAGCAATTCAAAGGCAAGCTTGGGGAAGGAGGATTTGGG
TCTGTTTTCAAGGGACAGCTAGGTGAGGAAAGGGTTGCAGTAAAATGTTTGGATCGAGCTGGTCAGGGAAACAGAGAATT
TTTGGCAGAGGTTCAAACAATAGGCAGCATTCATCATATCAATCTAGTGAGGCTGTTTGCTTTCTGTGCTGAGAAATCCC
ACAGGCTCTTGGTATACGAGTATATGCCCAAAGGATCCTTGGATAGGTGGATCTATTGTCGACCTGACGATGATGCTCCT
CCTCTAGATTGGAGCACACGATGCAAGATAATCACTAACATAGCTAAGGGTCTCTCTTATCTTCATGAGGAATGCGTGAA
GAGAATTGCTCATTTGGATGTCAAGCCACAAAACATCCTCATAGATGACAACTTCAATGCCAAAATTTCTGATTTTGGCC
TATGTAAGCTCATTGATAGGGATATGAGCCAAGTGGTTACTAGAATGAGAGGGACACCTGGATACTTAGCTCCTGAATGG
TTGACATCACAAATCATAGAGAAGGCTGACGTTTATAGCTTTGGCATTGTGGTCATGGAAATCATCAGTGGAAGAAAGAA
CCTCGACACTTCCTAGTCTGAAGAGAGCATCCATCTTATTACTCTACTGGAAGAAAAGGTGAAGAACGGTTACTTGGTAG
ACTTGATGGACAAGAGCAGTAACGACATGCAAGCACATGAGCAAGACATAATTCAGATGATGAAGCTCGCCATGTGGTGT
TTGCAGATTGACTTCCAAAGAAGGCCTAAAATGTCAGAGGTAGTCAAAGTCTTGGAAGGTAGCATGGATGCTGAGAGCAA
TATAGATCATAACTTTGTTGCAACAAATGAAGCAAATTTCTATATTGCTGGAAATGTGAAATCCTCTGGTCCACCTGTAG
CCTCAGATCTATCAGGTCCCAGGTGAAATGAGATAATCCCAACAAAGACAGCCAGCCCGATCATGAGCAGAA-A------
--TGTTCTGAAAGGAAAAAAAAGCATATCTG-------T--TGTATCTTTCCAAATTAGTACAATCAGAATCCCCTTATC
TTGAGTTAATTTTACCTTCAAAATGTTTTGATATTGCAAACCTTCTTGTTCTACAGCAGAACAACTCATTGTATTCCATA
CTGATGTTCAG-ATTCTCTTTGTAATGCA---------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------
>chr3B_859
-GGCCAG-------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------------------CAAGCACAGAACCATCA
TCTAGGAAAGTAAGAACTGTTGTTTTGATTGCAATTACTGGTCCCATAGTTTTTG---------TTCTCGCATTGATCTT
TTTCGTCGTATATCGGAGAAGAACACGACGGCACCATGAGATGGAGGAAGATGAGGCAGAGTTCGGTCAACTACAAGGAA
CACCAATGAGGTTTACGTTTCAACAGTTAGAAGCAGCAACAGAGCAATTCAAGGACAAGCTCGGGGAAGGAGGATTTGGG
TCTGTTTTCGAGGGACAGCTAGGCGAGGAAAGGATTGCGGTAAAACGTTTGGATCGAGCTGGTCAGGGGAAGAAAGAATT
CTTGGCGGAGGTTCAGACAATTGGCAGCATTCATCATATCAATCTGGTCAGGCTGTTTGGTTTCTGTGCAGAGAAATCCC
ATAGGCTCTTGGTTTATGAGTATATGCCAAAAGGATCCTTGGACAGGTGGATCTATGGTCGACATGAAAATAGTGCTCCT
CCGTTAGAATGGAAGGTACGATGCAAGATTATCACTGACATAGCTAAGGGTCTGTCTTATCTCCACGAGGATTGCATGAA
GAGAATTGCTCATTTGGATGTCAAGCCACAAAATATCCTCTTAGATGATGACTTCAATGCTAAACTTTCCGATTTTGGTC
TATGCAAGCTCATTGATAGGGACATGAGTCAAGTGGTTACAAGAATGAGAGGCACACCTGGTTATCTAGCCCCTGAATGG
TTGACATCACAAATCACGGAGAAGGCCGATGTCTATAGCTTTGGCGTTGTGGTCATGGAAATCGTGAGCGGAAGAAAGAA
CCTCGACACTTCCCTGCCTGAAGAGAGCGTCCATCTTATTACCCTATTGGAAGAAAAGGTGAAGAACAATCACTTGGAAG
ATTTGATTGACAAGAGCAGCAACGACATGCAAGCACACGAGCGAGATGTGATTCAGATGATGAAGCTCGCGATGTGGTGT
TTGCAGATTGACTGCAAAGGAAGGCCTAAAATGTCCGAGGTAGTCAAAGTCTTGGAAGGTACCATAGATGCAGAGAGCAA
CATAGATCATAACTTTGTCGCAACAAATGAACCAAATTTTGGTATTGCTGGAAATGTGAACTCTTCAGCTCCACCTGTAG
CCTCAGATGTATCGGGTCCAAGGTGAAATGAGTCGATCCCGAG-AAGACAGACAATTAGATTAT----------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------
>chr3A_891
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------TAGGCACTTCTGTTTCAGTTGCAATTGCAGGTGCCATAGGTTTAA------TAATCGTCACATTCATCTT
TTTCATCATACGTCGAAGAGGAACACGACGACACCATGAGATGACAGATGAGGAGGCAGAGTTTGATCAGCTACAAGGAA
CACCAATGAGGTTTACGTTTCAACAGTTAGAAGCAGCAACAGAGCAATTCAAGGACAAGCTCGGGGAAGGAGGATTTGGG
TCTGTTTTCGAAGGGCAGCTAGGCGAGGAAAGGATTGCGGTAAAACGTTTGGATCGAGCTGGTCAGGGAAAGAGAGAATT
CTTGGCGGAGGTTCAGACAATCGGTAGCATTCATCATATCAATCTGGTGAGGCTGTTTGGCTTCTGTGCAGAGAAATCCC
ATAGGCTCTTGGTTTATGAGTATATGCCAAAAGGATCCTTGGACAGGTGGATCTATGGTCGACATGAAAATAGTGCTCCT
CCGTTAGAATGGAGGGTGCGATGCAAGATTATCGCTGACATAGCTAAGGGTCTGTCTTATCTTCATGAGGATTGCATGAA
GAGAATTGCTCATTTGGATGTCAAGCCACAAAATATCCTCTTAGATGATGACTTCAATGCTAAACTTTCCGATTTTGGAC
TATGCAAGCTCATTGATAGGGATATGAGTCAAGTGGTTACAAGAATGAGAGGCACACCTGGTTATCTAGCCCCTGAATGG
TTGACATCACAAATCACGGAGAAGGCCGATGTCTATAGCTTTGGCGTTGTGGTCATGGAAATCGTGAGCGGAAGAAAGAA
CCTCGACACTTCCCTGTCTGAAGAGAGCATACATCTTATTACCCTATTGGAAGAAAAGGTGAAGAACAATCACTTGGAAG
ATTTGATTGACAAGAGCAGTAACGACATGCAAGCACACGAGCAAGATGTGATTCAGATGATGAAGCTCGCGATGTGGTGT
TTGCAGATTGATTGCAAAGGAAGGCCTAAAATGTCCGAGGTGGTCAAAGTCTTGGAAGGTACCATGGATGCAGAGAGCAA
CATAGATCATAACTTTGTCACAACAAATGAACCAAATTTCGGTATTGCTGGAAATGTGAACTCTTCAGCTCCACCTGTAG
CCTCAGATGTATCGGGTCCAAGGTGAAATGAGTCAATCCCGAG-AAGACAGACAATTAGATTATGAGGTGCTAAATGAAA
TG---------AGTG--AAAGA-CTTGTCTG-------T--TGTATCTTTCCAAATTATTACAATCTGAAGCCGCTTATG
TTGAGTTAATTTTACCTGCAAAATGTTTGAATATTACGAACCTTCTTGTTTTACAGCAGAAGAACTTATT-TATTCTACA
GT-TTGTTCAG-TTTCTGTCTGTAATGCAGTTCTGTTT------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------
>chr2D_933
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------GTTTCATCTTAATTGCCGGATTCCTCCT
TTTTTTCGTGCATAGACGAAGAACGCGACGACACCGGGAGATGGAGGAAGAGGAGGAAGAGTTTGGGAAGCTACAAGGAA
CACCAATGAGGTTCACATTTCATCAGTTAGAAGTAGCAACCGAGCAGTTTAGAGACAAGCTTGGCGAAGGAGGGTTTGGT
TCTGTGTTTGAGGGACAGCTTGGTGGGGAAAGGATTGCAGTAAAACGTTTGGATCAAGCAGGTCAAGGAAAGAAAGAATT
CTCAGCAGAGGTTCAGACGATCGGCAGCATCCACCATATCAATCTGGTGAAACTAATTGGTTTCTGCGTAGAGAAATCAC
ATAGGCTCTTGGTATACGAGTATATGCCCAAAGGATCCTTGGACAGATGGATATATTGTCACGATGATAATATTGATCCT
CCCTTGGATTGGAGCACGCGATGCAAGATTATCACTCACATAGCTAAGGGTCTCTCTTATCTCCACGAGGAATGCACGAA
AAGAATTGCTCATTTAGATGTTAAACCACAAAATATTCTCTTAGATGACAACTTCAATGCCAAACTTTCTGATTTTGGAT
TATGCAAGCTCATTGATAGGGATATGAGCCAAGTAGTTACTCGAATGAGAGGCACACCTGGATATTTAGCTCCAGAATGG
TTGACCTCACAAATCACAGAAAAGGCTGATGTCTATAGCTTCGGCATTGTTGTAATAGAAATCATCAACGGAAGACAGAA
TCTCGACCCTTCCCGGTCCGAAGAGAGCATGCATCTTATTACCCTTTTGGAAAAAAAGGTGAAGCATGATAACTTGGTAG
ATATGATTGACAAGACCAGTAAAGATATGCAAGCACACGAGCAAGATGTAATTCAGATGATGATGCTCGCGATGTGGTGT
TTGCAAATTGATTGCAAAAGAAGGCCTAAAATGTCCGAGGTAGTCAAGGTCTTGGAAGGTACCATGAATGCAGAGAGCAA
TATAGATCATAACTTTGTTGCAACGAATCAAGTGAATTTCCGCATTGCTGACAATGCAGCTTCTTCAGTTCCACCTCTAG
CCTCACATGTATCAGGCCCCAGGTGAAATGAGGCAATCCTGAC-AACATAGGCAATTAGATTATGAGCAGGACAGGAGAT
TTTCTTTTGTAAAGCAAAAGCC-ATGTTCTG-------T--TGTAT----------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------
>chr3D_939
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------------TTTTAATCGTCACATTCATCTT
TTTCATCATACGTCGAAGAAGAACACGACGACACCATGAGATGACAGATGAGGAGGCAGAGTTTGATCAGCTACAAGGAA
CACCAATGAGGTTTACGTTTCAACAGTTAGAAGCAGCAACAGAGCAATTCAAGGACAAGCTCGGGGAAGGAGGATTTGGG
TCTGTTTTCGAAGGGCAGCTATGCGAGGAAAGGATTGCGGTAAAACGTTTGGATCGAGCTGGTCAGGGAAAGAGAGAATT
CTTGGCGGAGGTTCAAACAATCGGTAGCATTCATCATATCAATCTGGTGAGGCTGTTTGGCTTCTGTGCAGAGAAATCCC
ATAGGCTCTTGGTTTATGAGTCTATGCCAAAAGGATCCTTGGACAGGTGGATCTATGGTCGACATGAAAATACTGCTCCT
CCGTTAGAATGGAGGGTGCGATGCAAGATTATCGCTGACATAGCTAAGGGTCTTTCTTATCTTCATGAGGAGTGCATGAA
GAGAATTGCTCATTTGGATGTCAAACCACAAAACATCCTCTTAGATGACGACTTCAATGCTAAACTCTCTGATTTTGGTC
TATGCAAGCTCATTGATAGGGATATGAGTCAAGTGGTTACAAGAATGAGAGGCACACCTGGTTATCTAGCCCCTGAATGG
TTGACATCACAAATCACGGAGAAGGCCGATGTCTATAGCTTTGGCGTTGTGGTCATGGAAATCGTGAGCGGAAGAAAGAA
CCTCGACACTTCCTTGTCTGAAGAGAACATCCATCTTATTACCCTATTGGAAGAAAAGGTGAAGAACAATCAGTTGGAAG
ATTTGATTGACAAGAGCAGCAACGACATGCAAGCACACGAGCGAGATGCGATTCAGATGATGAAGCTCGCAATGTGGTGT
TTGCAGATTGACTGCAAAGGAAGGCCTAAAATGTCCGAGGTAGTCAAAGTCTTGGAAGGTACCATGGATGCAGAGAGCAA
CATAGATCATAACTTTGTCGCAACAAATGAACCAAATTTCGGTATTGCTGGAAATGTGAACTCTTCAGCTCCACCTGTAG
CCTCAGATGTATCAGGTCCAAGGTGAAATGAGACAATCCCAGC-AAGACAGCCGGTACGATTATGAGCAGATGA------
--TGTTCTGAAAGTA--AAAGA-CCTGTATG-------C--TGTATCTTTTCGAATTAGTACAATCCGAAGCTGCTTATC
TTGAGTCAATTTTACCTGCAAAATATTTTAATATTACAAACCTTCTTGTTCTACAGCA-AAGAACTTATTCTATTCTATA
GT-TTGTTCAG-TTTCCCGCTGTAATGCA---------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------
>chr3B_939
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------------TTTTAATTATCACATTCATCTT
TTTCATCATACGTCGAAGAAGAACACGACGACACCAGGAGATGGAGGAAGAGGAGGCAGACTTCAGTCAGCTACAAGGAA
CGCCAATGAGGTTTACGTTTCAACAGTTAGAAGCAGCAACAGAGCAATTCAAGGACAAGCTCGGGGAAGGAGGATTTGGG
TCTGTTTTCGAGGGGCAGCTAGGCGAGGAAAGGATTGCGGTAAAACGTTTGGATCGAGCTGGTCAGGGGAAGAGAGAATT
CTTGGCGGAGGTTCAGACAATCGGCAGCATTCATCATATCAATCTGGTGAGGCTGTTTGGTTTCTGTGCAGAGAAATCCC
ATAGGCTCTTGGTTTATGAGTATATGCCAAAAGGATCCTTGGACAGGTGGATCTATGGTCGACATGAAAATAGTGCTCCT
CCGTTAGAATGGAGGGTGCGATGCAAGATTATCACTGACATAGCTAAGGGTCTATCTTATCTTCACGAGGATTGCATGAA
GAGAATTGCTCATTTGGATGTCAAACCACAAAACATCCTCTTAGATGACGACTTCAATGCTAAACTCTCTGATTTTGGTC
TATGCAAGCTCATTGATAGGGATATGAGCCAAGTGATTACAAGAATGAGAGGCACACCTGGATATCTCGCCCCTGAATGG
TTGACATCACAAATCACGGAGAAGGCCGATGTCTATAGCTTTGGCGTTGTGGTCATGGAAATCGTGAGCGGAAGAAAGAA
CCTCGACACTTCCCTGTCTGAAGAGAGCATCCATCTTATTACCCTATTGGAAGAAAAGGTGGAGAAGAATCAGTTGGAAG
ATTTGATTGACAAGAGCAGTAATGACATGCAAGCACACGAGCGAGATGTAATCCAGATGATGAAGCTAGCGATGTGGTGT
TTGCAGATTGACTGCAAAAAAAGGCCTAAAATGTCCGAGGTAGTCAAAGTCTTGGAAGGTACCATGGATGCAGAGAGCAA
CATAGATCATAACTTTGTCGCAACAAATGAACCAAATTTCAGTATTGCTGGAAATGTGAACTCTTCAGCTCCACCTGTAG
CCTCAGATGTATCGGGTCCAAGGTGAAATGAGTCAATCCCGAG-AAGACAGACAATTTGATTATCAGGTGCTAAATGAAA
TG---------AGTG--AAAGA-CTTGTCTG-------T--TGTATCTTTCCAAATTATTACAATCTGAAGCCGCTTATG
TTGAGTTAATTTTACCTGTAAAATGTTTTAATATTATGAACCTTCTTGTTTTACAGCAGAATAACTTATT-TATTCTACA
GT-TTGTTCAG-TTTCTCTCTGTGATGCAGGTCTGTTT------------------------------------------
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>SNPs
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS-------------S---
-S---------------S-------S--------S----------S---S------------------------------
------------S-----S-----------------------------------------------------------S-
S-------------------------------------------------------------------------------
----------------------------------------S------S--------------------------------
----------------------------------------------------------S-----------------S---
----------------------------------------------------------------------S----S----
--------------S--------------------S----------------S---------------------------
-------------------S----------------------------S-------------------------------
-------------S------------------------------------------------------------------
----S-------------------------S--------------S----------------S-----------------
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--------------------------------------------------------------------------------
---------------------------------------------------S----------------------------
-----------------------------------S--------------------------------------------
--------------------S-----SS-S-------------------------------S--S---------------
--------------S-------------S--S------------S-------S--S------------------------
-----------------------------SS---S---S------SSS-SS--SSSSSSSS-SSSSSSSS-SSSSSSSSS
SSSSS---SSS--SSS-SSSSSS-SS-S--SSSSS--S-SS-S---S--SSSS-SSSSSS-SS-S-SSSSS-SSSSSSS-
S-SSSS---SS-SSSS-------------------------S-S-S-S-S-S--S----SSS-SSSSS---S------SS
SS-S----S-SSSS-S-SSSSS----------------------------------------------------------
------------------------------SS--------------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SS-----S----S--------S------------S--------S----S-S---------------------------SS
------------S---------------S------S--S-----------------------------------------
-----S--S-------------------------------------------S----------SSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
>forward_727
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-------------------------------------------------------------------AAATTGGCAGGCT
CCCTACC-------------------------------------------------------------------------
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-------------------------------------------------------
>reverse_2380
--------------------------------------------------------------------------------
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-----------------------------------------------------------ATGTACTGCTCCCTCCCAGT-
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-------------------------------------------------------
