>input_sequence_62725
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-----------------------------------------------ATGGCGGCTGATCCGCCATCCTCCTCGTGGCAT
GCTTTGCTGTGCCTCGCGCTCTTCTCGGCCGTCGTCGCGTCGTCGTCCGCGATGGACTGCGACGGCGACGACCGCGCCGC
GCTGCTGAGGGTGAAGGCGCAGCTGGGCGACCCCGTGCAGCTCTCGTCCTGGCTCCCGGCCACCAACTGCTGCGCCTGGG
AGCCGCCCGCCGTCTTCTGCTCCGCGGCCGGCCGAGTCACGGGGCTGGCGCTCTCCTCCCTCGACGGCGTCCGCGCGCCC
GTCCCGCCGGCGCTCGGCGAGCTCCCGGAGCTCGTCATCCTCCAGGTCCAGTCCGTCCGCGGCCTGTCCGGCCCCATCCC
GTCCTCCTTCGGCAACCTCACGCGCCTCGAGGACCTCAACATCGCCGGCACCTCCATCTCCGGCCCGGTGCCGGACTTCC
TCGCCGGGCTAACAAGCCTCCGCACCCTCGTCATCGCCGACGGCAAGCTCGCCGGCCCCATGCCCGGGTGCCTGGGCAGC
CTCCCCGGCCTCAGGTACCTGGACCTCAGCGGCAACATGCTCACCGGCGCCATCCCGCCGGGGCTGCTGCACGGGAGCTT
CAGGTTCCTGATCCTGGCCAACAACCAGCTCACCGGCGAGATACCGAGCGACTGCGGCGACGACGACGTCGACACCCTCG
ACCTCTCCCGCAACCGGCTGACGGGCGACCCGTCGCCGTTCCTGTTCGGCATCGCGAAGCCGCTGGCCAAGGTCGACCTG
TCGTGGAACGAGCTCGAGTTCGACATGAGCGACGTCAGCTTCCCGCACCACCTCACGTTCCTGGACCTCAGCCATAACCG
GATCAACGGAAGCGTGGCCAAGTCGCTGATGGACGTGAAGCTGGAGCACTTGGACGTCAGCTACAACGGCCTCTGCGGCG
AGATCCCGGCGGGGAGGTTCATGTCGGCGCACGGGGCGTAGAGCTACGAGCAGAACAGGTGCCTGTGCGGCACGCCTCTG
CCTCCCTGCACCACAGGAGGCATCCTAGGTCGGTAG--------------------------------------------
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>chr5A_1_TraesCS5A01G266200
GCAGCCGGCAGCCGTCGAGGTTGACGGTGCGTCACTGACAGAAGCAGCGTCAGCAGAGGCCGG------GGACGGGAGAC
ACCCAAGCGGCAGCGGCGGTGAGGACCCGGCCTGGG-AAGCCCCGAGCTATGCACTGTCGGAGATGCAGCCACAACCGGC
CACAGCGGCAGCCCAACGCGGGACAAATGGCCACCAGCGGTCGGGGCAGCCTTGCGGGAGGCCAGGGCAGCCGCGGCCAG
CACCGCGGCGGAGGTGGCTAACCCTGACGGAGCAACCGACATCGTGGATGCCGATGCAGGCCGCTTGCTCGGTGACGGCG
GGACGACGCTCGGCCTGAAGCCTGCGGGCAGCAGCGTGCCAGCCGGGACGCAGGGCGGCGGTGGGGAGGGCGCCGCCGGC
GAGGGCCTCGGGAAGCGCTCGGCGGACGGAGCTCCCGCCATGACCGACGCCGCGGACGCAGGCTTAGAGCACGGTCGTGG
AGGCATGGCGTCGGATGGAGCGAAGCTTCGCAGGGGAGAGAGAGGAGGTGGAGGGGATCTCAGATCCGGTCTCAGCTGAA
GCAGGGGAGGCCGGAAGCGGTAGATCGGGCGGCGCCGCCGCGAGCGCTCACCCGCCGGAAGCGCGAGTGCGAGAGCCTCT
CATGTCCTGGGCGGAGAAAACTTCATGTTTCCATGGTCATAGTTCAAGACCACTGTGCTGACTGTGTGTCCAGCTCTGTT
TTATCTACTTGTATTCTGCTGGGGCACCTTTTCTGTTTGTACTGAAATCGGGTGGTAACAAACTTCTGTTTTCCCTGTAC
CCTGAGGCACATGTTCAGGTATGTCGTCTCAGGGAGAGAATCCTGCACGGCTCGGCGCGGCGCGGTTCTCGTTCCCGCGC
TGGTACGTCCAACTCGCAACCACCGGAGAATCCCCAGCTCTAAATCTTCACGCATTTGTCGCCGGAGTCTGACAGTATTT
AGATGCATGAGAAACAGAACACTGCTGCGCTTGTGTCTCTCTCGGCAATGGCGGCTGATCCGCCATCCTCCTCGTGGCAT
GCTTTGCTGTGCCTCGCGCTCTTCTCGGCCGTCGTCGCGTCGTCGTCCGCGATGGACTGCGACGGCGACGACCGCGCCGC
GCTGCTGAGGGTGAAGGCGCAGCTGGGCGACCCCGTGCAGCTCTCGTCCTGGCTCCCGGCCACCAACTGCTGCGCCTGGG
AGCCGCCCGCCGTCTTCTGCTCCGCGGCCGGCCGAGTCACGGGGCTGGCGCTCTCCTCCCTCGACGGCGTCCGCGCGCCC
GTCCCGCCGGCGCTCGGCGAGCTCCCGGAGCTCGTCATCCTCCAGGTCCAGTCCGTCCGCGGCCTGTCCGGCCCCATCCC
GTCCTCCTTCGGCAACCTCACGCGCCTCGAGGACCTCAACATCGCCGGCACCTCCATCTCCGGCCCGGTGCCGGACTTCC
TCGCCGGGCTAACAAGCCTCCGCACCCTCGTCATCGCCGACGGCAAGCTCGCCGGCCCCATGCCCGGGTGCCTGGGCAGC
CTCCCCGGCCTCAGGTACCTGGACCTCAGCGGCAACATGCTCACCGGCGCCATCCCGCCGGGGCTGCTGCACGGGAGCTT
CAGGTTCCTGATCCTGGCCAACAACCAGCTCACCGGCGAGATACCGAGCGACTGCGGCGACGACGACGTCGACACCCTCG
ACCTCTCCCGCAACCGGCTGACGGGCGACCCGTCGCCGTTCCTGTTCGGCATCGCGAAGCCGCTGGCCAAGGTCGACCTG
TCGTGGAACGAGCTCGAGTTCGACATGAGCGACGTCAGCTTCCCGCACCACCTCACGTTCCTGGACCTCAGCCATAACCG
GATCAACGGAAGCGTGGCCAAGTCGCTGATGGACGTGAAGCTGGAGCACTTGGACGTCAGCTACAACGGCCTCTGCGGCG
AGATCCCGGCGGGGAGGTTCATGTCGGCGCACGGGGCGTAGAGCTACGAGCAGAACAGGTGCCTGTGCGGCACGCCTCTG
CCTCCCTGCACCACAGGAGGCATCCTAGGTCGGTAGTCTCTAGTGATAATTCAGGTTTGTGCATGCATGAGTGGGAGTGG
CGGCAGACGACGGTGATCAACGGGCAGCATGTTTTTTGTATGTTCAAGTTAGGGTGAGTATAAATTACACGCTCCATAAG
CTATAATCGTGGAATCTTGGAGTGCATGCTCCATTGACTCGTTGAACAATTGTGACGGGTGTACGAGTAAAAGCGTCTTA
TATTTTGTTTACGAATAATCCTACACCTAGGAAAAGAACTACGAAGGGCTACGTAATTCTTTGCCCCCCTCCCTATTTTC
AGTGGGGGTGGGCCCCGCCTTCTCCCAAGACCAATCAAAATTTGCCAACTGAGTAATCACGTAACAATTACTCCCTCCGT
TCCTAAATATTTGTCTTTCTAGAGATTTCAACCAGTGATTACATACGGAACAAAATGAGTGAATCTACATTTTAAAATAA
GTCTATATACATCCGTATGTAGTAGTTCATTTGAATCTCTAAAAAGACAAATATTTAGGAACGGAGGGAGTACGTGCGTT
TAGTAGGTGTAGCATTGCCGTTTGTTTACATAGGAGAAACGAAAGGGGTACGTACGGGTAAAATCTTCTTACTGGTCTTT
CATTCTCAAAATGCTTCCCAAGTTAAGAGCTCACTCTTGCTACCAAATTACTCATGGGAATATTTCCTTTTGGAGTTCCC
CGTGCTATTCTTTCTCGACCGCCATTCATAATCATCTCATCATTCAACCGCCTGGCTTTATTTATCCTGCTCAGGTTAAG
GGCCTCTCTTCCTGGGCAAAAAACTTGAAACAACAATCTTATTCATTCTCTTTTTCGAAAAACCTATACCTTCTTCTATT
ACTCAAACCTCCACTATTCAGGATGATCGCCCAAATATTCTTTGTTGGGACCTCACTCCAAATGGCAAATGCACTTCTAA
ATTCACTCTATTGCCGCCGCCGGCTCTTCTCCCCCTCCATTCCCCCTCGACGCCTTCAGAGGCAGCCGTTGGCTCG
>chr2A_6
-----CGGCAGCCATCGAGGTTGGCGGTGCGTCACTGACAGAAGCAGCGTCAGCAGAGGCCGA------GGACGGGAGAC
ACCCAAGCGGCAGCGGCGGTGAGGACCCGGCCTGGGGAAGCCCCGAGCTATGCACTGTCGGAGATGCAGCTACAACCGGC
CTCGGTGGCAGCCCAACGCGGGACAAATGGCCACCAGCGGTCGGGGCAGCCTTGCGGGTGGCCAGGGCAGCCGCGGCCAG
CACCGCGGCGGAGGTGGCTGACCCTGACGGAGCAACCGACATCGTGGATGCAGATGCAGGCCGCTTGCTCGATGACGGCG
GGACGACGCTCGGCCTGAAGCCTGCGGGCAGCAGCGTGCCAGCCGGGACGCAGGGCGGCGGTGGGGAGGCCGCTGCCGGC
AAGGGCCTCGGGAAGCGCTCGGCGGACGGAGCTCCCGCCATGACCGACGCCGCGGACGCAGGCTTAGAGCACAGTCGTGG
AGGCATGGTGTCGGATGGAGCGAAGCTTCGCAGAGGAGAGAGAGGAGGTGGAGGGGATCCCGGATCCGGTCTCAGCTGAA
GCAGGGGAGGCCGGAGGCAGTAGATCGGGCGGCGCCGCCGCGAGCGCTCACCCGCCGGAAGCGCGAGCGCGAGAGCCTCT
CATGTCCTGCGC--------------------------------------------------------------------
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>chr7A_8
-------GCAGCAGTCGAGGTTGACGGTGCGTCACTGACAGAAGCAGCGTCAGTAGAGGCCGGGGACGGG------AGAC
ACCCAAGCGGCAGCGGCGGTGAGGACCCGGCCTGGGGAAGCTCTGAGCTATGCACTGTCAGAGAAGCAGCCACAACCGGC
CTCGGCGGCAGCCCAACGCGGGACAAATGGCCACCAGCGGCTGGGGCAGCCTTGCGGGAGGCCAGGGCAGCCACGGCCAG
CACTGCTGCGGAGGTGGCTGACCCTGACGGAGCAGCCGACATCGTGGATGCAGATGCAGGCCGCTTGCTCGATGACGGTG
GGACGACGCTCGGCCTGAAGCCCGCAAGCAGCAGCGTGCCAGCCGGGACGCAGGGCGGCGGTGGGGAGGCCGCCGCCGGC
GAGGGCCTCGGGGAGCGCTCGGCGGACTGAGCTCCTGCCATGGCCGACGCCGCGGATGCAGGCTTGGAGCATGGTCGTGG
AGGCATGGCGTCGGATGGAGCGAAGCTTCGCAGGAGAGAGAGAGGAGGTGGAGGGGATCCCGGATCCGGTCTCAGCGG-A
GCAGGGGAGGCCGGAGGCGGTAGATCGGGCGGCGCCGCCGCGAGCGCTCACCCGCCGGAAGCGCGAGCGCGAGAACCTCT
CATGTCCTTGG---------------------------------------------------------------------
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>chr4D_10
---------AGCAGTCGAGGTTGATGGTGCATCGCTGACAGAAGCAGCGTCAGCAGAGGCAGGGGACGA------GAGAC
ACCCAAGCGGCGGAGGCGGTGAGGACCCGGCCTGGGGAAGCCCCGAGCTATGCACCGTCGGAAATGCAGCCACAACCAGC
CTCGGAGGCAGCCCAACGCGGGACAAATGGCCACCAGCGGCCGGGGCAGCCTTGCGGGAGGCCAGGGCAACCGCGGCCAG
CACTGCGGCGGAGGTGGCTGACCCTGACGGAGCAGCCGGCATCGTGGATGCAGGCGCTGGCAGCTTGCTCGGTGACGGCG
GGACGACGCTCAGCCTGAAGCCTGCGGGCAGCAACGTGCCAGCCGGGACGCAGGGCGGCGGTGGGGAGGCCGCCGCCGGC
GAGGGCCTTGGGGAGCGCTCGGCGGACTGAGCTCCCTCCATGGCCGATGCCGCGGACGCTGGCTTGGAGCACGGTCGTGG
AGGCATGGCGTCAGATGGAGCAAAGCTTCGCAGGAGAGAGAGAGGAGGTGGAGGGGATCCCGGATCCAGTCTCAGCTGAA
GCATGGGAGGCCGGAGGCGGTAGATCGGGCGGCGCCGCCGCGAGCGC---------------------------------
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>chr1A_10
---------AGCAGTCGAGGTTGACGGTGCGTCGCTGACAGAAGCAGCGTCAGCAGAGGCCGGGGACGGGGACGGGAGAC
ACCCAAGCGGCAGCAGCGGTGAGGACCCGACTTGGGGGGG--CCGAGCTATGCACTGTCGGAGATGCAGCCACAACCGG-
---------------ACGCGGGACAAATGGCCACCAGCGGCCGGGGCAGCCTTGCGGGAGGCCAGGGCAGCCGCGGCCAG
CACTGCAGCGGAGGTGGCTGACCCTGACGGAGCAGCCGACATCGTGGATGCAGATGCAGGCCGCTTGCTCGGTAACGGCG
GGACGACGCTTGGCCTGAAGCCTGCGGGCAGCAGCGTGCCAGCCGGGACGCAGGGCGGCGGCCG----------GCCGTC
GAGGGCCTCGGGGAGCGCTCGGCGGATGGAGCTCCCGCCATGGCCGACGCCGCGGACGCAGGCTTGGAGCACGGTCGTGG
AGGCATGGCGTCGGATGGAGCGAAGCTTCGCAGGGGAGAAAGAGAAGGTGGAGGGGATCCCGGATCCGATCTCAGCTCAA
GCAGAGGAGGCCGGAGGCGGTAGATCGGGCGGCCCCGCCGCGAGCGCTCACCCGCCGGGAGCGCGAGCGCGAGAGCCTCT
CATGTCCT------------------------------------------------------------------------
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>chr5B_737
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-----------------------GCACCTTTTCTGTTTGTACTGAAATCCA-TGGTAACAAACTTCTGTTTTCCCTGTAC
CCTGAGGCACATGT--------------TCAGGGAGAGAACCCTGCACGGCTCGGCGCGGCGCGGTTCTCGTTCCCGCGC
TGGTACGTCGAACTCGCAACCACCAGAGAATCCCCAGCTCTAAATCTTCACGCGTTCGTCGCCGGAGTCCGAGAGTATTT
AGATGCATGAGAAAC-----ACTGCTGGGTTTGTGTCTCTCTCGGCAATGGCGGCTGATCTGCCATCCTCCTCGTGGCAT
GCTCTGCTGTGCCTCGTGCTGTTCTCTGCCGTCGTCGCGTCGTCGTCCGCGATGGACTGCGACGGCGACGACCGCGCCGC
GCTGCTGAGGGTCAAGGCGCAGCTGGGCGACCCTGTGCAGCTCTCGTCCTGGCTTCCGGCCACCAACTGCTGCGCCTGGG
AGCCGCCCGCCGTCTTCTGCTCCGCGACCGGCCGAGTCACGGGGCTGGCGCTCTCCTCCCTCGACGGCGTCCGCGCGCCC
GTCCCGCCGGCGCTCGGCGAGCTCCCGGAGCTCGTCATCCTCCAGGTCCAGTCCGTCCGCGGCCTGTCCGGCCCCATCCC
GTCCTCCTTCGGCAACCTCACGCGCCTCGAGGACCTCAACATCGCCGGCACCTCCATCTCCGGCCCGGTCCCGGACTTCC
TCGCGGGGCTGACAAGCCTCCGCACCCTCGTCATCGCCGACAGCAAGCTCGCCGGCCCCATCCCCGGGTGCCTGCGCAGC
CTCCCCGACCTCAGGTACCTGGACCTCAGCGGCAACATGCTCACCGGCGCCATCCCGCCGGTGCTGCTGCACGGGAGCTT
CAGGTTCCTGATCCTGGCCAACAACCAGCTCACCGGCGAGATACCGAGCGACTGCGGCGACGACAACGTCGACACCCTCG
ACCTCTCCCGCAACCGGCTGACGGGCGACCCGTCCCCGTTCCTGTTCGGCATCACGAAGCCGGTGGCCAAGGTCGACCTG
TCGTGGAACGAGCTCGAGTTCGACATGAGCGACGTCAGCTTCCCGCACCACCTCACGTTCCTGGACCTCAGCCACAACCG
GATCAACGGGAGCGTGGCCAAGTCGCTGATGGACGTGAAGCTGGAGCACTTCGACGTCAGCTACAACGGCCTCTGCGGGG
AGATCCCGGCGGGGAGGTTCATGTCGGCGCACGGGGCAGAGAGCTACGAGCAGAACAGGTGCCTCTGCGGCACGCCTCTG
CCTCCCTGCACCACG---GGCATGCTAGGTCGGTAGTCTGTAGAGGTTATTCAGGTTTGTGGATGCATG-----------
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>SNPs
SSSSS---------------------------------------------------------------------------
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-S-S----------------------------------------------------------------------------
-------------------S-------------------------------S----------------------------
---------------------------------------------------------------------S----------
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-----------------------------------------------------------S-S------------------
---------------S---------------------------------------------------S------------
------------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSS--------------------------SSS----------------------------
--------------SSSSSSSSSSSSSS------------S---------------------------------------
---------S--------------S----------------------------S--S------------S--S-------
---------------SSSSS-------S-S------------------------------S-------------------
---S------------S---S-----S-----------------------------------------------------
------------S--------------------S--------------------S-------------------------
--------------------------S-----------------------------------------------------
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---------------------------------------------------------------------S----------
----S-----S------------------------------S-------------------S------------S-----
-------S-----------------------------------------------------S------------------
----------------------------------------------------------------S---------------
----------------------------------S------------------S--------S-----------------
--------------------------------------------------------------------------S-----
---------S-----------------------------------------S--------------------------S-
-------------------------------------SS-------------------------S---------------
--------------SSSS-----S---------------S---S-S-S-------------S-------SSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
>forward_664
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----TCCTGGGCGGAGAAAACTTC--------------------------------------------------------
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>reverse_2336
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---------------CGCCTTCTCCCAAGACCAAT---------------------------------------------
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