>input_sequence_62697
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----------------------------------------------------------ATGGCGCTCAGCCTCTTGAACC
CTGCTCCCTCCTCCAAGATCGCACTCAAAGCTCCAGTCCCGCCACTCCCGAACCGCTCGTTTCTCTTCCCGCCACCGCGC
CTGCCTGCTCTCCACGTTGCCCTCCTCCTCCGCAGTCCGCCGCACCGGCGCGTCCAGTCGTCGTCGGCGCCGTCGGCCCC
GCCGACGGACGGCTCCCCGACGCCACCATCGTCGAGGGAGGAGGCGGTCGCGCAGGCCAGGTCGTGCCTGGCCACGGCGC
TGCGCAAGCCGCTCAACAACTCGCTCCCGGCGCGGAAGCTCAAGAAGCAGCAGCGGCAGGCCCGGTTCCGCGCCGAGATC
CCCGTGGTCGACGACTCGCCGGGCTCCCTCGCGCGCCTCGCCTTCGACGTCTTCTCGGGCCTCGGCGTGTCCCGGAAGGG
CTCGCCGGCGAGGCTGCTCCTCGTGTGGCCCTCCGCGGAGGACCAGGCGGTGGCCGTGCGCGAGTTCAAGAACTGGGGGG
ACACGTCGGCGCTGGCGCACGCGCAGCTGGACGCGGTGGCGCCGGACGCGCTGGGCGCCTGCGACGCCGCCGTGTTCCTC
TCGCCGGGGCGGCCGCAGGTGGAGAAGCTGCGGGCGGCCGTCAGCGCGCTGGACCCCAGGCCGGCGGTGCTGTTCAACCC
GGGGTGGAGCTACGAGGTGGAGGAGGAGGGGTTCGGCGGCGTCGCCAAGGGCTTCGTGGGCTCCTTCAACGTGGTCTACT
CCTTCATGGGGCTGGAGGTGAAGGGGCTGCTGAGCAAGAAGAAGGGCGTGCTGCTCCGGTGCGTGGAGGGCGGCAGGTTC
GGCGGCGAGAGCTGGGTGCTCATGATGGAGGACGAGGAGAAGGAGCCGGAGCTGAAGGTGGTGTCGCGGATGAAGCGGCG
GCCGACGGTCGGCGAGGTGGAGAACATGATGTACAACCTCATGGCCGCCAACTCGCCGGTGACCAAGTCCGCCAGGTTCC
TCAGGGAGCTCGTGTCCAACGTCACGGGAAGGAAGGGGAAGCCGTGA---------------------------------
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>chr1A_1_TraesCS1A01G319400
CGATTGAAGGAATTGCCAGCAGGAGGGCATGGCGGCTGCACCTAGCGACTTTCCAGACTCTCGGGCCACGGGCAAGGTCA
AGGGAGTGCAGAAGCGCGCCCGTCGTCTTGCCCGACAATGTGCTTGTGGACGCGGACAAAGCAATACTGTGAAACAAGAG
GAGGAGCCCCAGTCAATACGC-TAGATGTAAACAGAAGCAGTCTGTG------AATAATTTAAAGGGAGGAGCCCGAGAA
TAAAATGGAACAGGTAACTGGGGATCGGCCTAACCTGAAGATCGTAAAGGACGTTGAGGTACAAGGTTGAACAAATTCAG
CGCGAGGTTGAGTGCGCTCGGCCGCTACCGCCCCCCGCTCCGCGCCCGCCGGCAGGACGCCATACACCGATACACGTCGA
GGAGTCACGCACCGGTGTGACCAGAGACATCGCCCTCGCCCACCACGCATACACGGGGGATGTCCCTCCCTTCCTCCT--
CCTCCTCCTC-----TCTCTCTC---------------------------------------------------------
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---------------------GGCGGCGCACCAGGTCTTGCCCTAGGCCAACGTCGGGAGATGTCGGGGTGGGATTGAAT
GGGGCTAGGAGGTGGCCGCAGAGTAAAATCGAGATCGTTCGTGCGAGATCCGACGGTGACCCGTAGCATTGATCCACAGG
CTTTCGATTCTGCCCCTAGAGCAGCAGCCCAAGGACAGTCGGCCCAGGAGTAG-CCCATGCGGGAGAAAAAGCGTGCGTT
GGACGGGCTAGGGACAAACGTGGCCCAGCAACCAGAAACGTGCGTTGAAGGTCGAACTGTAGGACAAATCTGACGGCCAG
GAACATCTGCATCGTCAAAATGGACGGTTAAAAACTCTAATTGCTGAGAGAGCTCGCTTTAGGTGCGGTTATACTGTCCT
TAATTGCACGCAGCTTCTGGGCAGTGGGGCCAAGCAGCCAGTGTCCAAGCCCAGCTCTGCTCCACCAGCTCGCTTCCCGC
ACCATGGA-----GAGCAGAGCACCACACCTTATCGTCTTCTTCTCTTGTTCGCGCCAATGGCGCTCAGCCTCTTGAACC
CTGCTCCCTCCTCCAAGATCGCACTCAAAGCTCCAGTCCCGCCACTCCCGAACCGCTCGTTTCTCTTCCCGCCACCGCGC
CTGCCTGCTCTCCACGTTGCCCTCCTCCTCCGCAGTCCGCCGCACCGGCGCGTCCAGTCGTCGTCGGCGCCGTCGGCCCC
GCCGACGGACGGCTCCCCGACGCCACCATCGTCGAGGGAGGAGGCGGTCGCGCAGGCCAGGTCGTGCCTGGCCACGGCGC
TGCGCAAGCCGCTCAACAACTCGCTCCCGGCGCGGAAGCTCAAGAAGCAGCAGCGGCAGGCCCGGTTCCGCGCCGAGATC
CCCGTGGTCGACGACTCGCCGGGCTCCCTCGCGCGCCTCGCCTTCGACGTCTTCTCGGGCCTCGGCGTGTCCCGGAAGGG
CTCGCCGGCGAGGCTGCTCCTCGTGTGGCCCTCCGCGGAGGACCAGGCGGTGGCCGTGCGCGAGTTCAAGAACTGGGGGG
ACACGTCGGCGCTGGCGCACGCGCAGCTGGACGCGGTGGCGCCGGACGCGCTGGGCGCCTGCGACGCCGCCGTGTTCCTC
TCGCCGGGGCGGCCGCAGGTGGAGAAGCTGCGGGCGGCCGTCAGCGCGCTGGACCCCAGGCCGGCGGTGCTGTTCAACCC
GGGGTGGAGCTACGAGGTGGAGGAGGAGGGGTTCGGCGGCGTCGCCAAGGGCTTCGTGGGCTCCTTCAACGTGGTCTACT
CCTTCATGGGGCTGGAGGTGAAGGGGCTGCTGAGCAAGAAGAAGGGCGTGCTGCTCCGGTGCGTGGAGGGCGGCAGGTTC
GGCGGCGAGAGCTGGGTGCTCATGATGGAGGACGAGGAGAAGGAGCCGGAGCTGAAGGTGGTGTCGCGGATGAAGCGGCG
GCCGACGGTCGGCGAGGTGGAGAACATGATGTACAACCTCATGGCCGCCAACTCGCCGGTGACCAAGTCCGCCAGGTTCC
TCAGGGAGCTCGTGTCCAACGTCACGGGAAGGAAGGGGAAGCCGTGACATTGGTTTCATTGGCCTTGTGTGTTCACGGCG
TCTCCTGAACTTTCAACACTTTGTTG-------ATTGCCTGAAAACTCTGAAATGGTTGTAGTGGTGCAGCAACAAGTTT
------------------GCATTTGCAATGCATCTTCGGAATATGATAGGCAATGTTAACCTATGGATAATAGAAGTTTT
GCGCGCTAGCAAATGACAGAAATCAGGTGTGCAACAACTTGGGATTAACACCCATTGTTGATAATACTAGTGTATGATAC
TATATTCGTAACAGTTTGTTTAATTCACATATAAATGATTTTTAAGGACATCACATCTAAGCTCCCACAAATATATAATG
CAGCAACAAGAAATAAAAACTAGGACAAAAAAATAGACCACAAACAAAATGAATATCAGCTTAGATGTGATGTCACATAT
ATTCATAATGCATAGTATCGTAGTATTTTGGTATCGTA------------------------------------------
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--------------------------------------------------------GAGGACTATATTTATT--------
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---------------------GACATGCATAACACAAAGTAGCACATCATGTAATATAATACAGTATCAAGTATCAGGAT
ATGATACTCAATCATCTCTTTCTTCATTTAATTCCATACCACCTCATCA-------------------------------
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-----------------------------------------AAATTGTTTAGTTGTCATGCATCCATTACGAAC------
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--------------------------AACTTTAAATATCTTTGTTCATCATGACCATTTTCAGTGCTCAGAACGGAATTG
AAGGGAATTATTTTCTGGCGTAAGGCAGGCGGCGCTGCTTTCATTGGGATTAGAGGGGAAATAGTTACAGGATGGTACAA
ATTCCTAAGAGGTGATG---------------------------------------------------------------
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--------------------------------------------------CTTAATTTTGAAAGGAA-------------
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---------------------------------------------------------------------------ATAAT
TCCCGATGCTTCTTATTCCCAAGAGATCAATCACGCTTGGGCCGCTCCGACGCCACATTTTATTTTTCACTGTCGCCCTT
CTCAATCACTTCTCGGTATCGCCCACCGGCATGCTTCGTTTTGACTACTCGCTGTTGGTAGACACGGAGAAGGTCAGA-T
AAGTATTTATAAACAAGATCAGTAGAGCCATTGATACATGTGCATGTT--------TTATTATAGGCTTTAGT-------
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>chr1A_3
--ATTGAAGGAATTGCCAGCAGGAGGGCATGGCGGCTGCACCTAGCGACTTTCCAGACTCGCGGGCCACGGGAAAGGTCA
AGGGAGTGCAAAAGCGTGCCCGTCGTCTTGCCCGACAGTGTGCTTGTGGACGCAGACAAAACAATACTGTGAAACAAGAG
GAGGAGCCCCAGTCAATACG-TGAGATGTAAACAGAAGCAGTCTGTG------AATAATTTAAAGGGAGGAGCCCGAGAA
TAAAATGGAACAGGTAACTGGGGATCGGCCTAACCTGAAGATCGTAAAGGACGTTGAGATACAAGGTTGAACAAATTCAG
CGCGAGGTTGAGTGCGCTCGGCCGCTACCGCCCCCTGCTCCGCGCCCGCCGGCAAGACGCCATACACCGATACACGTCGA
GGAGTCACGCACCGGTGTGACCAGAGACATCGCCCTCGCCCACCACGCATACACGGGGGATGTCCCTCCCTTCCTCCT--
CCTCCTCCTCCTCTCTCTCTATC---------------------------------------------------------
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---------------------GGTGGCGCACTAGGTCTCGCCCTAGGACAACGTCGGGAGATGTCGGGGTGGGATTGAGT
GGGGCTAGGAGGTGGCCGCAGAGTAAAATCGAGATCGTTCGTGCGAGATTCGACAGTGACCCGTAGCATTGATCCACATG
CTTTTGATTCTGCCCCCAGAGCAGCAGCCCAAGGACAGTCGGCCCAGGAGTAG-CCCATGCGGGAGAAAAAGCGTGCGTT
TGATGGGCTAGGGACAAATGTGGCCTAGCAACCAGAAACGTGCGTTGAAGGTCGAACTGTATGACAAATCTGACGGCCAG
GAACATCTGCATCACCAAAACGGACGGTTGAAAACTCTAATCGCTGAGAGAGCTCGCTTTAGGTGCGGTTATACTGTCCT
TAAT----------------------------------------------------------------------------
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>chr4A_81
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AGGGAGAGCAGAAGCACGTCCGTCGTCTTGCCCGACAGTGTGCTTGTGGACGCGGACAAAACAATACTGCGAAACAAGAG
GAGGAGCCCCAGTCAATGCGTTTAGATGTAAACACAAGCATTCAGTCAATATCAATAATTTAAAGGGAGGAGCCCGAGAA
TAAAATGGAACTGGTGACTGGGGATCGGCCTAACCTGAAGATCGTAAAGGACATTGAGATACATCGTTGGACAAATCCAG
CGGGAGGTTCAGTGCGCTCGGCCGCTACCGCCCACTGCACCACGCCCACCAGCGAGACGCCAT--------ACACGCCGA
GGAGTGACACACCGATGTGACCAGAGACATCGCCCTCGCCCGCCACGCATACACGGGGGATGTCCATCCCTCCCTCCCTC
CCTCCTCCTCCTCTCTCTCTCCTAGGGATGGCAATGGGTACCCATTACCCGCGTACCCTGCGGGTAAAAACCCTATTAGG
GTAAAGGTATGGGATAAAAATTTACCCATGGGTACTTAAATGGGAAAATATCATACCCGTCGGGTGGAAAGGGTACGGGT
ATGGGATCGTATAACCCATGCCCACTTACCCATGTACCCATCTAAAATGTTAACAAATGGGTTTCCGTTAATATCATAAC
GTATTAATTTTGCCCTCCTAATCATGCTAGATAAAAACTCTAATGTGTAGTAAAATTATCTCTACGATTTATCTTGATTT
TGTGAACTTAAAGTGTATACGTATGTGTTGTTATGTATGATTATGTGTTGTTTTTTTAACATTTTTATGTGTCACTTTAT
AGGCAAGTATTTTTGTTTATGAGAATGTGTTATTGTTACAATATGTTATTGTATATTGTTGTTTAAAATTTGTTGCTATT
AATAATTTATGATTATATATTGCTTTTTACAACTATTTTCTACTCAACTGATGTGTTGTAAATGCGGGTATATTTACCCG
CGGGTACCCATATACCCTGTCGGGTGATGGGTATGAGAAAAAATTGTACCCTTGACGGGTATGGGTATGGGTGATGGGTA
AGTTCAGGGTGGATGGGTAAGGGTATGGGGTAGCTCCACCCGTACCCATACCCTGCGGGCGCCATCCCTACTCTCTCCCT
CCCTCTCTCTCTGACTACAGAGGCGGCGCACAAGGTCTCGCCCTAGGCCAACGTGGGGA-----------GGGATTGAGT
GGGGCTAGGAGGTGGCCGCAGAGTAGAATCGAGACCGTTCGTACAAGATCTGACGGTAACCCGTAGCAGTGATCCACAGG
CTTTCGATTCTGCCCCCAAAGCAGCAGCCCAAGGACAGTCGGCCCAGGAGTAGGCCCATGCGGGAGAAAAAGCGCGCCTT
GGACGGGCTAGGGACGAACGCGGCCCAGCAACCAGAAATGTGCGTTGAGGGTCGAACTGTAGGACAAATCTGACGGTCAG
GAACGTCTACATCGCCAAAACAGACGGCCGAAATCTCTAATCGCTGAAAGAGCTCGGTTTAGGCTCAGTTTTACTGTCCT
TAAATATGCAC---------------------------------------------------------------------
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>chr1B_870
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--ATTGCACGCAGATTCTGGGCAGTGGGGCCACGCTGTCAGTGTCCAAGCCCG-----GCTCCCCCAACTCGCTTCCCGC
ACGCACCATGGAGGAGCAGAGCACCACACCTTATCGTCTTCTTCTCTTGTTCGCGCCAATGGCGCTCTGCCTCTCGAACC
CTCCTCCCTCCTCCAAGATCGCACTCAAAGCTCCAGTACCGCCACTCCCGAACCGCTCGTTTCTCTTCCCGCCACCGCGC
CTGCCTGCTCTCCAAGTTGC---CCTCCTCCGCGGTCCGCCGCCGGGGCGCGTCCAGTCGTCGTCGGCACCGTCGGCCCC
GCCGACGGACGGCTTCCCGACGCCACCATCGTCGAGGGAGGAGGCGGTCGCGCAGGCCAGGTCGTGCCTGGCCACGGCGC
TGCGCAAGCCGCTCAACAACTCGCTCCCGGCGCGGAAGCTCAAGAAGCAGCAGCGGCAGCCCCGGTTCCGCGCCGAGATC
CCCGTGGTCGACGACTCGCCGGGCTCCCTCGCGCGCCTCGCCTTCGACGTCTTCTCGGGCCTCGGCGTGTCCCGGAAGGG
CTCGCCGGCGAGGCTGCTCCTCGTGTGGCCCTCCGCGGAGGACCTGGCGGTGGCCGTGCGCGAGTTCAAGAACTGGGGGG
ACACGTCGGCGCTGGCGCACGCGCAGCTGGACTCGGTGGCGCCGGACGCGCTGAGCGCCTGCGACGCCGCCGTGTTCCTG
TCGCCGGGCCGGTCGCAGGTGGAGAAGCTGCGCGCGGCCGTCAACGCGCTGGACCCCAGGCCGGCGGTGCTGTTCAACCC
AGGGTGGAGCTACGAGGTGGAGGAGGAGGGGTTCGGCGGCATCGCCAAGGGCTTCGTGGGCTCCTTCAACGTGGTGTACT
CCTTCATGGGGCTGGAGGTGAAGGGGCTGCTGAGCAAGAAAAAGGGGGTGCTGCTCCGGTGCGTGGAGGGCGGCAGGTTC
GGCGGGGAGAGCTGGGTGCTCATGATGGAGGGCGAGGAGAAGGAGCCGGAGCTGAAGGTGGTGTCGCGGATGAAGCGGCG
GCCGACGGTCGGCGAGGTGGAGAACATGATGTACAACCTCATGGCCGCCAACTCGCCGGTGACCAAGTCCGCCAGGTTCC
TCAGGGAGCTCGTGTCCAACGTGACGGGAAGGAAGGGGAAGCAGTGACATTGGTTCCCTTGGACTTGTGTGTTCACGGCG
TCTCCTGAATTTCTTTCTGC---TGTCGTGCCAATTGCCTGAAAACTCTGAAATGGTTCTAGTGGTGCAGCAACATGTTT
GATTTTGTAATTCAGGCGGCATTTGCACAGCATCTGCAGATTATAATAGGCAATGTTAACCAACGGATAAGGGAAGTTTT
GTGTGCTAGGAAATGAGAGAAATCAGGTGTTCGAAAGCTTGAGATTAACACGCA--------------------------
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>chr1D_873
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-----GCACCCAGATTCTGGGCAGTGGGGCCACGCTGTCAGTGTCCAAGCCCA-----GCTCCACCAACTCGCTTGCCGC
ACCATGGA-----GAGCAGAGCACCACACCTTATCGTCTTCT---CTTGTTCGCGCCAATGGCGCTCAGCCTCTCGAACC
CTCCTCCCTCGTCCAAGATCGCACTCAAAGCTCCAGTTCCGCCACTCCCGAACCGCTCGTTTCTCTTCCCGCCACCGCGC
CTACCTGCTCTCCACGTTACCCTCCTCCTCCGCGGTCCGCCGCCGGGGCGCGTCCAGTCGTCGTCGGCACCGTCGGCCCC
GCTGACGGACGGCTCCCCGACGCCCCCGTCGTCGAGGGAGGAGGCGGTCGCGCAGGCCAGGTCGTGCCTGGCCACGGCGC
TGCGCAAGCCGCTCAACAACTCGCTCCCGGCGCGGAAGCTCAAGAAGCAGCAGCGGCAGGCCCGGTTCCGCGCCGAGATC
CCCGTGGTCGACGACTCGCCGGGCTCCCTGGCGCGCCTCGCCTTCGACGTCTTCTCGGGCCTCGGCGTGTCCCGGAAGGG
CTCGCCGGCGAGGCTGCTCCTCGTCTGGCCCTCCGCGGAGGACCAGGCGGTGGCCGTGCGCGAGTTCAAGAGCTGGGGGG
ACACGTCGGCGCTGGCGCACGCGCAGCTGGACACGGTGGCGCCGGACGCGCTGAGCGCCTGCGACGCCGCCGTGTTCCTG
TCGCCGGGGCGGCCGCAGGTGGAGAAGCTGCGCGCGGCCGTCAACGCGCTGGACCCCAGGCCGGCGGTGCTGTTCAACCC
GGGGTGGAGCTACGAGGTGGAGGAGGAGGGGTTCGGCGGCGTCGCCAAGGGCTTCGTGGGCTCCTTCAACGTGGTGTATT
CCTTCATGGGGCTGGAGGTGAAGGGGCTGCTGAGCAAGAAGAAGGGCGTGCTGCTCCGGTGCGTGGAGGGCGGCAGGTTC
GGCGGGGAGAGCTGGGTGCTCATGATGGAGGACGGGGAGAAGGAGCCGGAGTTGAAGGTGGTGTCGCGGATGAAGCGGCG
GCCGACGGTCGGCGAGGTGGAGAACATGATGTACAACCTCATGGCCGCCAACTCGCCGGTCACCAAGTCCGCCAGGTTCC
TCAGGGAGCTCGTCTCCAACGTGACGGGAAGGAAGGGGAAGCAGTGAGATTGGTTTCCTCGGACTTTTGTGTTCACGGCG
TTTCCTGAACTTTCTTTCTTCTGTGTCGTGCAAACTGCCTGAAAT-TCTGAAATGGTTGTGGTGCTACAGCAGCATGTTT
GATTTTGTAATTCAGGCGGCATTTCCATGGCGTCTGCAGATTATGATAGGCAATGTTAACCAACGGATAAGGGAAGTTTT
GTGTGCTAGGAAATGAGAGAAAACAGGTGTTCGAAAGCTTGAGATTAACACCCAACACTAGACATTTGTTCATCAATCAG
CATGGCCCTTTTCAGCATTCAGAACAGAATTGAAGTTTTTTTTTTTTTGACGAAAGGTAGGCAACGCCTGGCTGCTTTCA
TTGCCAGCACAGGGAAAATAGTTGGGCTGACCGAAAAGGAGTAGTTTAATACAGCAATTTAGTGTGCCTCAAATGGACGT
TCTGCGAGGCCACAACTCTAGCTCTCCCTGCGGCCACCCACAACGCAGCTTCGCTTTGCAATCTGGAGAAGACGATAGGA
GATCAGCTTCGCTTCGCAATTGTACCGATTGGAGATCTGACTGATGAATCGGCCGATGGATTCGACAGCGAGGTCAGCCT
TCAAGTGTCGCATCCATTTGTCATTCTCCATGGCAGTTTTAATGGTCACAGTCTGGAGAATGCACTGTCTGAGCAAGTCT
GGGTAAAGCTATTTGAAGCTCTGTATGACTTGTTCGATGGCACCTTTTGCCTTCTAGCAATGGTTGGCACATAAAAACTC
TAACTCTAATTCCTGATGCGTCTTATTCCAAGGAGAACACGCTTAGGCAACTCCCACGCCACATTTTACTCGTCATTGTT
ACCCTTCTCGGTCTCATCCACCGACATGCTTTGGTTTGACTACAGGATGTTGGTATACACAGAGGTCAGCGTAAGTATTT
ATAAACAAGATCAGCAGAGCAATTGATACATGTGCGTGCTCGACCACTCAAGAGAGTTATTATAGGTTTTAGTGTTTCAC
CGATTAACCTGTTCTGAAGATATTGCACTTGTTTTTTCTGAATACAGAGTACATGGTACGTCGCCTTTATTGCTTCACAT
GTTTGAGTTTCTGCAGAAAACTAGGAAGAGTAGATTTTTGGAACATGGCTGCATTGGAGGACTTTATTTTAAATAGTTTA
AGAATCACAGTTACAATTTCATAAAATCCTGGAAAGAATTCTACATGATCATATGGATGGATATTATACATGTGTAAAGT
TTGGTGATGAAATAAGTAAACATGTGAGCTGTGCAAAAATGACAAAAATGATGATTTCTAAATAGTGAATAATACATGCA
CTTTTCATCTTTCCAAAATCATGATTTTGCTTTTTGTGTGTAACTCACATGGTTACTTATTTCCAAGTTATTTGTGTGTA
ACTTACCCGGGGTGGAGCTACGAGGTGGAGGAGGAAGGGTTCGGTGGCATCGCCAAGGGTTTCGTGGGCTCCTTCAACGT
GGTGTACTCCTTCATGGGGCTGGAGGTGAAGGGGCTGCTGAGCAAGAAGAAAGGGGTGCCGCTCCGGTGCGTGGAGGGCG
GCAGGTTCGGCGGGGAGAGCTGGGTACTCATGATGGAGGACGAGGAGAAGGAGACGGAGTTGAAGGTGGTGTCGTGTATG
AAGCGGCGGCCGACGATCAGCGAGGTGGAGAACATGATGTACCACCTCATGGCCGCCAACTCACCACCCGTCTCCCCCAC
GAGAGACAGGGCGAAAGCTAACGCGCCGCCACCCCAGTCCCTCACTCTATGCATTCGGTTTATTGGGTTTACATGGTTTG
GTTTATATGGTTTTTCGGTTTGTACGGTATCAATACTTCGGTAAAAACGGTATGAACTTAAAACACGGTTCGGTTTCGGT
ATATACCAAATTATTTCGATATGGTTTCGGTATATACCATAATAACCAAAGTTGACGCGAACTTGAAAATGACTTAATAA
TAATTTACAAATGTATGACTCAAAACACATACTATTTTACACAAATAGTATATCACTATATATATAAGTTTATATGCATG
CATGGATTCATCCCTTAATTGTTATGGACGTGCTTAGCATTTTTAAAGAGAAAAATAACTATGTTACAGGAAACATGCAC
ATGCTTAGTAGTGAATTTCACTGATGTACAAGAAAAATGACAACTTGTATAGTTGTTCGCCTTGAGAAAAAATATTTTTT
ACTTCGGTTAACCGTTCGGTTTCTCGGTATATACCCAGCAACATGTTTAATTTTGTGATCCAGGCGGTATTTGCACAACA
TCTGCAGATTATGGTAGGCGATGTTAACCAATTGATAAAGGAAATTTTGTGTGCTAGCAAGTGACAGAAATCATGTCTTC
AAAAGCTTGAGATTAACACCGAACAATATATATCTTGCCTGGCTCCAACGAGGAAGGGGTGAAGACGGCGGCGCGCCTTC
GACTCGCTCCATGGACCTAGATGATTTTGTTTGTTGGTGTTTTTGGTACTACATTACATTGACAGATGGTGAGTAAATCG
AAAGTTTTTTCGTAAAAAAAACACCGAACAATAGATATCTTTGTTCATCATGGCCCTTTTCAGCATTCAGAGCATGATTG
AAGGGATTTTTTATGA-----AAGGCTGGCACCGCTGCTTTCATTGCGATCAGAGGACCAGACCAGCTTGACGAAGGGAG
GCATGCTGCAGCTGGAGAATTCACCGAATAGCCGAGCTGGCAGTGAACTGCCCATTCGTAGTTCAACGCCAAGTCAGAGC
ATCCTTCTCGCGGTCGCAACCGCACCAATTGGAGTCACAATAAAAATGAGTGAATTGGCCGATGGATTCGACAATAAGGT
CAGCTTTCAAGTGTCACATCCATTTGTCATTCTCCATACCGGTTTTTGTGGTTAACGTCCGGAGAGTGCACTGCTTGAAG
AGATCTAGGTAAAGCTCTTTGGAGCTCTACAGGTGCATCCAGGGTCCGTCCTGAATTTTGAAACGAAATTTCCAATTAGG
AGCATGGTTCTAATAGGTTTTTTTGAAACGAGGCAAAAGACTTGTCATTTCATTAATTAAGAAAGGAAGTATACCAGTGT
CCGAAGACAACAGCCAAATCTAGCAAAGATAAAGCAACTACCTGCGGGGTAAAATTACATCAAGACCTTTGGCACCTGCC
AACACCCACAATCTTGCTTCCTCCAGGATCTTGTCCACGATTATCATCGAAGGCGTAGAGACGTTTCGAAAGATCCTAGC
ATTTCTCTCCTTCCAAAGTTCCCAAGAAATAAGCATAAGTAGGGAGGCCATTCCTTTTCTACTCGGCGAGCACACGAGGG
CAAGCTCGGTCCACCAATCTCTGACACTGTTCCTTTCCGCCCAATCTCCGGTCATGATATCGCCCAGCCCAATCCTTGCC
TTAACTGCATTCCAAACCGCAATCGAGTATCGGCATGGCTCTAATGTCGGTGGGAGCAAAGTTGTTCGATGGCACCTTGC
CTTCTCACAACGATCGACACAGCAAAACATTACCGAGGCTCATTCAACATGCCAGGAATTTCTGCTGCTCTAACTATAAT
TCATGATGCCTCGTATTCCCACAAGATA----ACGCTTAGGCTGTTCCAACGACACATTTTATTCATCATTGTTACCCTT
GTCAATCACTTCTCGGCATCATCCACCGGCATGCTTCGGTTTGACTACTGGATGTTTGTATACATGAAGAAGGTCAGGGT
AAGTATTTATAA--AAGATTAGCAGAGCCATTCATACATGTTCAACCACTAGAGAGTTATTATTGGCTTTAAAGTTTCAC
CAATTAACTGTTCTGAAGATATTGCACTTGATTTTTCTGAACACAGAGTACATGGTATGTCGCCTTTACTGCTTCACATG
CTTGAGTTTATGCAAGAAACTAGGCCCATGTCACACAACCGCAGAAAAGTGCCACATACGTCGACTGATGAGAAGCCGTT
GGGCGTCTGGGCCATTCTTTTGCAAACTATGCTCCTTGCTCCATTAGCTTCCCACTATGCATTCCTCTCACTTTGGTTTA
AACAACTAATTTTTTAAATCACAAACTTTATTGATTTAAACAAGGGGAATACAATCATTTTTGTACACATTATACCGGGA
AGGCGGGAACAATGAATGAAACTAAGTCAGACACATCTTCTCCTACTCTCGCAAGCTTGCTTCGCACATAGATGTGTCGC
CTTATTTGTTTCCCACCCAACATGATCGATAGAAAAAGTTGGCGTTTAGCTCCTTGATCTCAATAAAGGATATGTGAAAT
TTTAAACCGTCATGTTTTACCAGGTTTCACAGTCAGACCACTCTACAATAATATGGCTCAAGCCCATCTAACAAACCAGC
CAAATACCATTACACGCAACCACTGCTTCCTCCACATGGCGCACATCAAATTCGAACTTTTAGACATCGGCCTTCGATGG
CTTCCATCGTGCTCTAGCCGGGCCTGCTCCATGGTGAAGCCGACGTGCACAGGAGGCGCGGAGCCGGGCAGTGTCGTCGG
AGCACGTCTCCACCGTGGTCTTGTCCTCCTCGTCGGAGACCTTGGGCGAGCTGGCCGGCAAGCCGGCCTCGATCCGCTTG
GCAAGGCGGCTCTACCAGGCAGCGGCAAGGGCGGCCACAGCATGCTTCATCTCCGTGAAAAGGTTGTCCCAAAGAGCTTC
GCCGCCTGTAGTCATGGCGGATGCAGTGCAAGGGAGGAGGATGGAGGGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNATAGCGGATTCCGGTGAGGTGAGGCGTCCGAGTACGTCAATGTGCGACTCCGGAGTGGG
TTTCTCGGTCGGCGATGTCCGAACACCCTCATATCCTTTCCAGGCATGGGCTGAGTTTGAGGCTTTTGCGGACAACTTGG
ACATATGAGAACGAGTTAGAGGGTTTAGTTGGATGGTATTTTTCTTATCTCTCCCGTCCGAGCTGTCCAGCCGAACATAC
GAGGGCAGTTTAAGGGATCCGGTTGTAGATGCTTTATAAAGATTAAAAACTCCTTTCTTTTAATCACAAACTTTATTATT
TAAAAAACATAACGGTGGGGAGAGCTAGGTGCTCATGATATGGAGGACGAGGAGAAGGAACCGGAGTTGAAGGTGGTGAG
GTGGAGAACATGATGTACAACCTCATGGCTGCCAACTCGTCGGTGACCAAGTCCGCCAGGTTCCTCATGGAGCTCGTGTC
CAACGGATGGGAAGGAAGGAGAAGGAATGAGATTGATCTCCTTGGACTTGTGTGTT
>SNPs
SS----------------------------------------------------------S-----------S-------
-------------------------------------S----------------------S-------------------
--------------------S-----------------------------------------------------------
----------------------------------------------------------S---------------------
-----------------------------------S------------------S-------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------S------S---------------------------------------S-
--------------------------------------------------------------------------------
----------------S---------------------------------------------------------------
--------------------------------------------------------------------------------
--------------S-----S--------S-----------S--------------------------------------
-------------S------------------S--S-S---------------SSSSS---------S------------
--------------------------------------------------------------------------S-----
--S----------------------------------S------------------------------------------
---------------------------------S---------SSS----------------------S-----------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------S--------------------S-------------------------S
--------------------------------S----------S------------------------------------
---------------------------------------------------------------------------S----
--------------------------------------------------------------------------------
-----S--------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------S-------------------S--------------S----S-----------------
--------------SS-SS-S---SS-------------------------------------------------S----
---------------------------SS------S-S--S--------------------S-S------SS--------
-S-S-----S------S-------------S-S-S-S----S------------SSSS-SSSS--SSSSSSS-SSSSS-S
S--SSS-S-SSSSSSSSS-SSS-SSSSS--SS--S-SS-----SSSSSS-SS-S-SS--S--SS-SS-SSSSSSS-SSSS
SS--S-SS-S-SSS----SSSSS-SSSSS-SSSS-S-SS-SS-SSSS---SS-SSSSSSSSSS-SSSSSSSSSSSS-SS-
SS-SSS-SSS--S-SSSSSSSSSSSSSS--SSSS-SSS------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------------------S-----SSS--------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------SS--S-S----SS-S---S---S-----SSSSSS--SS--SS-S-SSSSSS-SSS-S
SS--S--SSSSSS-SSS--SS-SSSSSSSS-SS---SS--SS-S-SSS--------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------S----S-------SSSS-S-SSSSS-SS-SS------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------SS--S------------------S--S-------SSS-----S-SSS----
------S--S--S-SSSSSSS-----S---SS--------------S---S-----SSS-SSSSSSSSS-SSSSSSSS-S
SSSSSSSSS--S--SS----------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------S----------S----------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--SS-----S--S--------SS----SSSSS------S---S-S---S---S-----------SS---S---SS-----
S---------------S---SS----------------S----------S-S----S---S---S-S----------S--
------------SS-----S--S---------S--------S--SSSS---------------S-------SS-------
--------------------------------------------------------------------------------
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--------------------------------------------------------
>forward_1279
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
-----------------------------------------------------------GATGTCGGGGTGGGATTGAA-
--------------------------------------------------------------------------------
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--------------------------------------------------------
>reverse_2476
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
---------------------------------------------------------------------------CTACT
CCTTCATGGGGCTGG-----------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------
>forward_1798
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
------------------TCGCACTCAAAGCTCCAGTC------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------
>reverse_5392
--------------------------------------------------------------------------------
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-------------------------------GCGCTGCTTTCATTGGGATT-----------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------
