>input_sequence_62687
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----------------------------------------------------------------------------ATGT
CGTATGATCAGATGCTCTCGCCGCTCCTCGGAGGCGCCGGCCGGTCGGCGTGGACGCCGCGGCTGCAGCAGCTGGGCGGC
GACGCGGTGACGAGGCAGATACTCAAGTGCACGCGGTGGCAGCTGGAGGAGACCACGGACTTCGTCACCTGCCCCTACCA
CTACTACTGCGACAGCTCCTACCCCGGCGACTACCACTCCGCCGTCGGCGCGCTCGTCGCCGCCTTCGCCGCCTACTGCT
TCGTCGCCGCGCTGGCCTTCGCCGTGCTCGACCTCGTTCGCAGCGGC------------------------GCGGCCGGC
GTGAGGGGCGTCAAGAGGAAGTACCTGGTCCCCTCGGGCCCGTTCCTGCTCCCGCTGGTGCTGCTGGCGCTGGCCAAGGG
GCAGCGCGTCAACGCCGTGTTCCCGCTCGCGCAGCTCGGCCCGGCATTGCTGCTGCTGCTGCAGGCGTCGGCGCTGGCGT
TCCGGAACGAGGCCGACGGCGACATCCGGTACGCGGTGCTGGAGGCCTCCACGGTGTCCGGCGTGCTGCACGCCAGCCTC
TACCTGGACGCCGTGGTGCTGCCCTACTACACGGGGCTGGAGGCGCTCCGGTGGTCGCGCTTCTCCGGGGAGTGCGCGTC
GTGCCTCTGCCGCATGGAGCCGCTGGTGGTGGGCGGCACGGCGATGCGGTACCGGGGCCTGTCCAAGACGGCGCTGGCCA
TCATCTTCGCGCTGTGCTCCAGGATGGTGTGCCGGATTTACGGCGAGGAGCGGCTGAGCGCGTGGACGCGGTCGGCGCTG
GAGGGCGTCGGGTGGGTGTTCGTGGCGGCCGACGCGGTGTACCTCGTCGGCTGGGTGGCGGCCGAGGGCGGCGCCGTCGG
GGTGGCGGCCTACAGCCTGGTGGCCGGCCTCGTCTTCCTCTGCGTCTTCGGCAAGGTGTACAGATTCTTGGCGTGCGTGG
AGTCGCGGCAGTCGCAGTGGAAATCGAGCCT---CTGCCACACCGTCGTCTGATCACCGTAAA-ATCTTCTTCCGTCCGT
CTGTAGAG-----AAAAAA-------------------------------------------------------------
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-------------------
>chr4B_1_TraesCS4B01G221500
TGTAACGTAAAAAAAGAAAAGAAAAG----AAAAACTCTTCGAACACGAAGAAGCAGAGCATCCATACCATGATACCAAC
TCACCTTTTATAAGCTGATGAA---------GGTCAAAAAGAAAAGAAAAA-ACTAACGTGTGCATGCAATGCAAGACGA
GGTAGCTAGATGCTAAATCG--------ATCGCTAATCATGCATGCCCAATGATGCATGTAAACTAATA-----------
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-------------------------------------------------------------------------TGCTGAA
TGAGCCAGCCCCATATTCTCACCAAACA--CCCCAACAAACTGCGTACTTTGAAGAAAATCAAATACGAT-CGAG-CCCC
CAACAAACTTTAACTACCGCTAACAGACAG---GTACTGCAACG-------TATACACCAAATTATACAA----------
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--------------------------------CGTACCAGATGTTTGTCTCCGTCCTCGCTCGCCTACCAACCATTACCA
ATGCAGCAGTACAAACAAAGTCAAACAATCCTTCCCTCCATCGGCCTCGCCTACTCTCTCCCTTTCTCTTCTGTCTTCTC
CCCCGACCCAACCACCATGACAGCAAACCATCACCGCCACATGACCCAAACGCCCCCGCCACAAAAGCCTCTGCTAATGA
TATCAGCAGCCAATAT----CTCTCTATCTTGACAAGCTGATATCATTTAATAATGGCGA------GGTGCGTGCTGTTT
CAAAGTTTCAGATCAGGGGCAAGCATGGCAAGTTCCCTCGGAGCCTCCAGTTAAACCTTCCCTATCC-GAATTTTTCCAA
GCTCCAACTCCCTCCTTTCTTCTACAAGCAACAACTCCAGCACACCAGCATCCATCCATCCATCCATCCATCCATCCA--
--AAGGGGGGAGAAAAGGGGTGTAA------------GAGGAGGAGGAAGAGGGCGAGGAGCTGCCTCTGAAAGCAAGCC
ATCATTAGGCCGCCAAATGCGGGAATGCGTATTGGCTAACAGGACAACAAGTCGAGGACCAAGGAGCAGGAGCTGCGTCG
GCGTCGGC------CGGGGGACGGACGACGAGAGAGGAGTGGAGCCGGCCTGCTAGCTAGCTTGCCGCGGAC-GCCATGT
CGTATGATCAGATGCTCTCGCCGCTCCTCGGAGGCGCCGGCCGGTCGGCGTGGACGCCGCGGCTGCAGCAGCTGGGCGGC
GACGCGGTGACGAGGCAGATACTCAAGTGCACGCGGTGGCAGCTGGAGGAGACCACGGACTTCGTCACCTGCCCCTACCA
CTACTACTGCGACAGCTCCTACCCCGGCGACTACCACTCCGCCGTCGGCGCGCTCGTCGCCGCCTTCGCCGCCTACTGCT
TCGTCGCCGCGCTGGCCTTCGCCGTGCTCGACCTCGTTCGCAGCGGC------------------------GCGGCCGGC
GTGAGGGGCGTCAAGAGGAAGTACCTGGTCCCCTCGGGCCCGTTCCTGCTCCCGCTGGTGCTGCTGGCGCTGGCCAAGGG
GCAGCGCGTCAACGCCGTGTTCCCGCTCGCGCAGCTCGGCCCGGCATTGCTGCTGCTGCTGCAGGCGTCGGCGCTGGCGT
TCCGGAACGAGGCCGACGGCGACATCCGGTACGCGGTGCTGGAGGCCTCCACGGTGTCCGGCGTGCTGCACGCCAGCCTC
TACCTGGACGCCGTGGTGCTGCCCTACTACACGGGGCTGGAGGCGCTCCGGTGGTCGCGCTTCTCCGGGGAGTGCGCGTC
GTGCCTCTGCCGCATGGAGCCGCTGGTGGTGGGCGGCACGGCGATGCGGTACCGGGGCCTGTCCAAGACGGCGCTGGCCA
TCATCTTCGCGCTGTGCTCCAGGATGGTGTGCCGGATTTACGGCGAGGAGCGGCTGAGCGCGTGGACGCGGTCGGCGCTG
GAGGGCGTCGGGTGGGTGTTCGTGGCGGCCGACGCGGTGTACCTCGTCGGCTGGGTGGCGGCCGAGGGCGGCGCCGTCGG
GGTGGCGGCCTACAGCCTGGTGGCCGGCCTCGTCTTCCTCTGCGTCTTCGGCAAGGTGTACAGATTCTTGGCGTGCGTGG
AGTCGCGGCAGTCGCAGTGGAAATCGAGCCT---CTGCCACACCGTCGTCTGATCACCGTAAA-ATCTTCTTCCGTCCGT
CTGTAGAG-----AAAAAAAAGAAGAAATTAAGAGAAAGAAA-CTCCTCCTCCTCCATTTCTTAGTTCACCCTTTGTTTG
TTAATTTTGATGTACAAATTTACAGTGCATGACACAATGGGCAGGCAAAAG---AATTCTGCAAAATTTCCCCCTG----
AAGCCATTCCTCTGTTTTTCTGTCGATGAATCTTCAGAAATCTG-CCCAACATTTTCCAT---ATCTTTCTGTCGGTCAC
ATTGCATTTTTTTTTCCGAATCAGG---------AAAGAAAAGGCTGTACTGCACTTTAGTTGGTGGTAATTTCAACTTC
GCCGCATGCATTAGTGCATCGACGGTGG-----ATCGTCGGCCGGAGTTAATAGTGTGAGCATTTGGCAGATGGGGCCGG
GTTCAGAAAAGCGAAGAGTACAAACCAGCAACAACAATGTCGCTTGTTGGCTTGTTCAGGGGCCTTTGTCATGGTGATCG
GGCGATGACCTAACCGCTGGCGGCTTCTGGAAGCCAGTTCTTGGAGGCTTCCTGCGATATCTGACAGTTGTTCCACT--T
GAGTTCTCTCTGTTGTCATCATCAGTTAATAATCCTTGTTTGGTTTGAGAGCAAGTGGTTGGAGCAT----TCACCTGGT
GTCTCACCCAGTTGGGAATGAACCCAAATTTTGCCGCACCCGGCCGCGGAGTCACCGAGGACTGCAGTTTAACAAAGAAT
TGGTCATGGCTCGTGAGAGAAAAAATAGCTCATTGACTGAAAAA-ATGACAGTAAATGTA----TACTCCTTGTCACATA
GTATGTGGCCCTATGCATATAGTCTCTATGAAACAAAGTGTTTGACTTGGTTGCATATACTCCAT---TTCTTCGAATCT
TGGCCTTCTTTCTTGAACAAGTTCCTTTCACTCTCATCATCATCGTGCGACATTGCGGTCACTCGCGACATTGCGGTCGG
CGGCTGTCTGTCCGACAATGTGGATGTTGCGCGACTTCTAGTGTGGCAACGATGACGGCTTCGAGCGAAGTTGGGCGGCT
GCTGAGCTTTGGTAGTCGG
>chr4D_1
TGTAATGTAAAAAGAAAAAGAA----AAGAAAAAACTCTTCGAACACGAAGAAGCAGAGCATCCATGCCATGATACCAAC
TCACCTTTTATA-GCTGATGAA---------GGTCAAAAGGAAAA-AAAAA-ACTAACGTGTGC-----ATGCAAGACGA
GGTAGCTAGATGCTAAACTG--------ATCCCTAATCATGCATGCCCAATGATGCGTGTAAACAAATGC----------
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TGAACCAGCTTCATATTCTCACCAAACCACCCCCAACAAACTGCGTACTTTGACAAAAATCAAATCAAATACGAGCCCCC
CAACAAACTTTAACTACCGCTAACAGACAG---GTACTGCAACGTACGTATTATACACCAAATTATACAA----------
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--------------------------------CGTACCAGATGTTTGTCTTCGTCCTCGCTCGCCTACCAACCA------
ATGCAGCAGTACAAACGAAGTCAAACAATCCTTCCCTCCATCGGCCTCGCCTACTCTCTCCCTTTCTCTTCTGTCTTCTC
CCCCGGCCCAACCACCATGACAGCAAACCATCACCGCCACATGACCGAAACGCCCCCGCCACAAAAGCCTCCGCTAATGA
TATCAGCAGCCAATAT----CTCTCTATCTTGAGAAGCTGAGATCATTTAATAATGGCGA------GGTGCGTGCTGTTT
CAAAGTTTCAGATCAGGGGCAAGCATGACAAGTTCCCTCCGAGCCTCCAGTTAAACCTTCCCTATCCCGAT---------
--TCCAACTCCCTCGTTTCTTCTACAAGCTACAACTCCAGCACACAAA------------CATCCATCCATCCATCCA--
--AGGGGGAGAGAAAAAGGGTGTAAGAGGAGGAGGAGGAGGAGGAGGAAGAGGGTGAGGAGCTGCCTCTGAAAGCAAGCC
ATCATTAGGCCGCCAAATGCGGGAATGCGTATTGGCTAACAGGACAAGAAGTCGAGGACCAAGGAGCAGGAGCTGCGTCG
GCGTCGGC------CGGGGGACGGACGACGGGAGAGGAGAGGAGCCGGCCTGCTAGCTAGCTAGACGC---C-GCCATGT
CGTATGATCAGATGCTCTCGCCGCTCCTCGGAGGCGCCGGGCGGTCGGCGTGGACGCCGCGGCTGCAGCAGCTGGGCGGC
GACGCCGTGACGAGGCAGATACTCAAGTGCACGCGGTGGCAGCTGGAGGAGACCACGGACTTCGTCACCTGCCCCTACCA
CTACTACTGCGACAGCTCCTACCCCGGCGACTACCACTCCGCCGTCGGCGCGCTCGTCGCCGCCTTCGCCGCCTACTGCT
TCGTCGCCGCGCTGGCCTTCGCCGTGCTGGACCTCGTCCGGAGCGGC------------------------GCGGCCGGC
GTGAGGGGCGTCAAGAGGAAGTACCTGGTGCCGTCGGGCCCGTTCCTGCTCCCGCTGGTGCTGCTGGCGCTGGCCAAGGG
GCAGCGCGTCAACGCCGTGTTCCCGCTCGCGCAGCTCGGCCCGGCATTGCTGCTGCTGCTGCAGGCGTCGGCGCTGGCGT
TCCGGAACGAGGCCGACGGCGACATCCGGTACGCGGTGCTGGAGGCCTCCACGGTCTCCGGCGTGCTGCACGCCAGCCTC
TACCTGGACGCCGTGGTGCTGCCCTACTACACGGGGCTGGAGGCGCTCCGGTGGTCCCGCTTCTCCGGGGAGTGCGCGTC
GTGCCTCTGCCGCATGGAGCCGCTGGTCGTCGGCGGCACGGCGATGCGGTACCGGGGCCTGTCCAAGACGGCGCTGGCCA
TCATCTTCGCGCTCTGCTCCAGGATGGTGTGCCGGATCTACGGCGAGGAGCGGCTGAGCGCGTGGACGCGGTCGGCGCTG
GAGGGCGTCGGGTGGGTGTTCGTGGCGGCCGACGCGGTGTACCTCGTCGGCTGGGTGGCGGCCGAGGGCGGCGCCGTGGG
CGTGGCGGCCTACAGCCTGGTGGCCGGGCTCGTCTTCCTCTGCGTCTTCGGCAAGGTGTACAGATTCTTGGCGTGGGTGG
AGTCGCGGCAGTCGCAGTGGAAGTCGAGCCT---CTGCCACGCCGTCGTCTGATCGCCGTAAACATCTTCTTCCGTCCGT
CTGTAGAG-----AAAAAAA-GAAGAAATTAAGAGAAAGAAA-CTCCTCCTCCTCCATTTCTTAGTTCACCCTTTGTTTG
TTAATTTTGATGTACAAATTTACAGTGCATGACACAATGGGAAGAAAGGCAACAAATTCTGCAAAAATTCCACCTGAAAC
AAGCCACTCCTCTGTTTTTCTGTCGATGAATCTTCAGAAACTTGCCCCACCATTTTCCATGCCATCTTTTTGTCGGTCAC
ATTGCAGTTTTTATTTTATTTTTCCAAATCAGAAAAAGAAAAGGCTGTACTGCACTTTAGTTGGTGGTAATTTCAACCTC
GCCGCATGCATTAGTGCATCGACGGTGGGTCGGATCGTCGGCCGGAGTTAATAGTGTGAGCATTTGGCAGATGGGGCCGG
GTTCAGAAAAGCGGACAGGACAAACCAGCAACAACAATGTCGTCTGTTCGCTTGTTCTGGGGCCTTTGCCATGGTGATCG
GGCGATGACCTAACCGCTGGCGGCTTCTGGAAGCCAGTTCTTGGAGGCTTCCTGCGATCTCTGACAGTTGTTGCCTTGAT
GAGTTCTCTCTGTTGTCATCATCAGTTAATAGTCCTTGTTCGGTTTGAGAGCAAGTGGTTGGAGCGTTGGATCACCTGCT
GTCTCACCCAGTTGGGAATGATCCCAAAATTTGCCGCACCCGGGCGCGGAGTCGCCGAGGACTGCAGTTTATCAAAGAAT
TGGTCATGACCCGTGAGAGAAAAAATAGCTCATTGACTGAAAAAAATGACAGTAAATGTAGTACTACTACTTGTCACATA
GTATGTGGCCCTATGCATATAGTCTCCGTGAAACAGAGTGTTTGACTTGGTTGCATATACTCCATTTCTTCTTCGAATCT
TGGCCTTCTTTGTTGAACAAGTTCCTTTCACTCTCATCATCATCGTGCGA------------------------------
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-------------------
>chr4A_1
TGTAATGTAAAAAAAGAAAAGAAAAGAAAAAAAAACTCTTCTAACACGAAGAAGCAGAGCATCCATACCATGATACCAAC
TCACCTTTTATAAGCTGATGAACAACTACAAGGTCAAAAAGAAAAAAAAAACACTAACGTGTGC-----ATGCAAGACGA
AGTAGCTAGCTAGATGCTGAATCGATCCATCGCTAATCATGCATGCCCAATGATGCATGTAAACTACTCCCTCCGTTTTT
AAATATTTATCTTTCTAAAGATTTTAACAAATAACTACATACAAAACAAAATGAGTGAATTTACACTTTAAAATATGTTT
ATATACATCCGTATGTGATAGTCTATTTTAAATCTTTAAAAAGATAAATATTTAGTAACGGAGGGACTAGTATTGCTGAA
CCAGCCAGCCCCATATTCTCACCAAACA--CCCCAACAAACTGCGTACTTTGACAAAACTCAAACCAAATACGAG-CCCC
CAACAAACTTGAACTACCGCTAACAGACAGCTGGTACTGCAACG-------TGTACACCAAATTATACAATCGTATGGTG
CTAGTACTGCTTATTACTACTGACCCGGGAGACCCCCGCCCGACCCCCGTGTCGCCTAGCTCTGGCGACACGGGGGTAGA
AACCCTAGCGCCGCCACAGTCCCCGCCCCCTCCCCCACCTCTCTCGTCGTCGCCAGAGGGCGCCCGCCGGCGAAGCCCGG
GCCGGCCCCGAGGAAGGCGGCGGCGGGGCGCTATCCCTGTCTAGTCTGGCGCGTCGAGAGGGGTTGCATCTGCGCGTCCA
TCGAGATCCGCCGGCGCTTGCTGGAGCCTGGGATCTGTGGTTGCGCGCCCGGATCCGCGCGTTTCGCGTCCGTGGCTGCG
CGGTGGAGGCGCCTGGCTACGTGCTTGTCCAACGCCCGCGCGCCCTTGGCTGCGTGTCGATGGGGTTGGGCGCGGTCACT
GCTGCGGGGATGCCCAGGGGCAGCGCGGACGTGCGCGTCGTCGTCGCAGGGTGATGCTGGGGGACGCGGGCTCCCCTAGC
TGGTGGCCTCTGGCCTGAGCGGCCGGATCTGACGGGCCCTATAGGTCAGATCTGGCGCTATGGCGGCCGGAGGTGGCTCG
GACGGCGACTGACTCCAAGCGGACTGTGGTAGCTCCATGTCGGGATGGTGGTCTGGGGTGGCGTGGTCTGGGCTGTGCCT
TCGGGACGCTCTAGGCTTGTGTCGCCGGCAGTGCTCCGGCTAGTTTTGTGCGGTGCAGCAAGTGGCGCAGCTCCGGTTTG
GTGGTGGTGTGTTTGCGAAGTCGTCGCAGCATAGGTGCTCGGTTTCCCTGACGAAAGTCATGCTCGACTCTGGTTTGAGC
TGATGGCAAATGACGCCTTCGGGTGTGATTTCCCTTGTTGGAGGTGCCATCAAGGGGGTCCGACACCTCTCCCTGCTCCG
TGTTCTTGTCTCCCGGTGAAAACCGTGTGCAATGGTGGCGTCTTTGGCGTCATTACTTTGTTGGAAGCATTGCCTTGGAG
TCAAGTCTGGTGTTGGAAGCATCTGGTTGGTGGTGGTGTGGTGGATCTGGAGCGGGCAGCGTCTTGGTGAGCATGGAGCA
TTGGTGGTGCGTCCGTTTGGAGTGGATCGTCGGTCGACGGTGAGAGGAGCAAGAGCACCCTTTGTATGCAAGTAGCGCCA
GGCGAGCTATGTCAGCTAGCCTCGTGGGATCGGAGCGGCATATGTCTCGCTCTTTCGGATGTATCGTTCCTCTCCGGTGT
CCTCGATGTTTGCGGATATGCTCGTAGCAGCCCGGTACAATACGACGGTTGTCGGTGTGCACTCTGGTAGCAGCGTAGGC
GCTCGAGTGCCCGCCCGGTGTGTTGTGGGGTTTTGGCTTTCCGGCGTTTTTGTATATGTTGTGGTGCTTTAGTCTTAGTT
TATCTAGGCGCTGCTTTGGTTTTAGCCCGGTTTCTCTCAATTAACTGAGCAGCCCTATTTTCCTTTTTTTTAGCACTTGC
CTTTATGCGATGCATTCCTCCTTTGGGGGTGTTCTTGTAATACCTTCTTCTGATCAACGAATTTGGCAGCTTGCCAACAT
TTAAAAAAAATAAAATTATACAATCGTACTTACGTACCAGATGTCTGTCTTCGTCCTCGCTCGCCTACCAACCA------
ATGCAGCAGTACAAACGAAGTCAAACAATCCTTCCCTCCATCAGCCTCGCCTACT--CTCCCTTTCTCTTCTCTCTTCTC
CCCCGGCCCAACCACCATGACAGCAAACCATCGCCGCCACATGACCAAAACGCCCCCGCCACAAAAGCCTCCGCTAATGA
TATCAGCAGCCCATATATCTCTCTCTATCTTGAGAACCCAGGATCATTTAATAATGGCGATGGCGAGGTGCGTGCCGTTT
CAAAGTTTCAGATCAGGGGCAGGCATGTCAAGTTCCCCCCGAGCCTCCAGTTAAACCTTCCCTATCC-GAT---------
--TCCAACTCCCTCATTTCT---------TACAACTCCAGCACACAAA------------AATCCATCCATCCATCCACC
CAAGGAGGAGAGAAAAAGAGTGTAGGAGGAGGAGGAGG------------------------TGCCTCTGAAAGCAAGCC
ATCATTCGGCCACCAAATGCGGGAATGCGTATCGGCTAACAGGACAAGAGGCCGAGCACCAAGGAGCAGGAGCTGCGTCG
GCGTCGGCGTCGGCCGGGGGACGGACGCCGAGAGAGCA----------------AGCTAGGTAGACGC---CGGCCATGT
CGTATGATCAGATGCTGTCGCCGCTGCTGGGAGGCGCCGGGCGGTCGGCGTGGACGCCGCGGCTGCAGCAGCTGGGCGGC
GATGCGGTGACGAGGCAGATACTCAAGTGCACGCGGTGGCAGCTGGAGGAGACCACGGACTTCGTCACCTGCCCCTACCA
CTACTACTGCGACAGCTCCTACCCGGGCGACTACCACTCCGCCGTCGGCGCGCTCGTCGCCGCCTTCGCGGCCTACTGCT
TCGTCGCCGCGCTGGCCTTCGCCGTGCTCGACCTCGTCCGGAGCGGC------------------------GCCGCTGGC
GTGAGGGGCGTCAAGCGGAAGTACCTGGTCCCCTCGGGCCCGTTCCTGCTCCCGCTGGTGCTGCTGGCGCTGGCCAAGGG
GCAGCGCGTCAACGCCGTGTTCCCGCTGGCCCAGCTCGGCCCGGCATTGCTGCTGCTGCTGCAGGCGTCGGCGCTGGCGT
TCCGGAACGAGGCCGACGGCGACATCCGGTACGCGGTGCTGGAGGCCTCCACGGTCTCCGGCGTGCTGCACGCCAGCCTC
TACCTGGACGCCGTGGTGCTGCCCTACTACACGGGGCTGGAGGCGCTCCGCTGGTCGCGCTTCTCCGGGGAGTGCGCGTC
CTGCCTCTGCCGCATGGAGCCGCTGGTCGTCGGCGGCACGGCGATGCGGTACCGGGGCCTGTCCAAGACGGCGCTGGCCA
TCATCTTCGCGCTCTGCTCCAGGATGGTGTGCCGGATCTACGGCGAGGAGCGGCTGAGCGCGTGGACGCGGTCGGCGCTT
GAGGGCGTCGGGTGGGTGTTCGTGGCGGCCGACGCCGTGTACCTCGTCGGCTGGGTGGCGGCGGAGGGCGGCGCCGTGGG
CGTGGCGGCATACAGCCTGGTGGCCGGGCTCGTCTTCCTCTGCGTCTTCGGCAAGGTGTACAGATTCTTGGCGTGGGTGG
AGTCGTGGCAGTCGCAGTGGAAATCCAGCCT---CTGCCACGCCGTCGTCTGATCGCCGTAAA-ATCTTCTCCCGTCCGT
CTGTATGTAGAGAAAAAAAA-CAAGAAATTAAGAGAAACAAATCTCCTCCTCCTCCATTTCTTAGTTCACCTTTTGTTTC
TTCATTTTGATGTACAAATTTACAATGCATGACACAATGGGAAGAAAGGCAAGAAATTCTGCAAAAATTTCCCCTGAAGC
AAGCCACTCCTCTGTTTT---------------------------------------------------CTGTCGGTCAC
ATTGCAGTTTTTTG-TTATTTTTCGAAATCAGAAAAAGAAAAGGCTGTGCTGCGCTTTAGTTGGTGGTAATTTCAACCTC
GCCGCACGCATTAGTGCGTCGACGGTGGATCGGCTCGTCGGCCGGAGTTAATAGCGTGAGCATTCGGCAGATGGGGCCGG
GTTCAGAAAAGCGAAGAGGACAAGCCAGCAGCAACAATGTCGCCTGCTGGCTTGTTCAGGGGGCTTGTCCGTGGCGATCG
GGCGATGACCTAACCGCTGGCGGCTTCTGGAAGCCAGTGCTTGGAGGCTTCCTGCGATCTCTGACACTTGTTCCACTC--
GAGCTCTCTCTCTTGTCATCATCAGTTAATAA----------GTTTGAGAGCAAGTGGT---------------------
--CTCACCCAGTTGGGAATGAACCCAAAATTTGCCGCACCCGCCCGCGGAGTCACCGAGGACTGCTGTTTATCACAGTAG
AGAATTTGTCAATGGGTGGA-------------------AATAAAATGACAGTAAATGTAGTGCTACTGCTTGTCACATA
GTATGTGGCCATATGCATATAGTCTCCGTGAACCAGAGCGTTTGACCTGGCTGCGTACACTCCATATTTTCTTCGAATCT
C---------TCTTGAGCAAGTTCCTTTCACCCTCATCATCACCGTGCGA------------------------------
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>chr4B_1094
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---------ACGAGGCAGATCGTCAAGTGCACCAGGTGGCAGCTGGAGGAGACCACCGACCTCATCACCTGCCCTTACCA
CTACTACTGCGACAGCTCCTACCCGGGCGACTACTCGGCTGCCGTCGGCGTCCTCGTCGCCGTTTTAGCCGTTTATTGCC
TCCTGTCCGCGGCGGCCTTCACCGTGGTAGAGATCGTCAGGGCTGGCGGCGGCAGCC---CGGCGACGGCGGCCGGTGGC
GTCGGGCGGATCAAGCGGAAGTACCTGGTGCCGTCGGGGCCCTTCTTGATGCCGCTGGTGCTGCTGGTGCTCGCCAAGGG
GCAGCGGATCAACGCCGTCTTCCCGCTCGCGCGGCTCGGCCCGGCATTGCTGCTCACGCTGCAGGCATCGGCGCTGGCGT
TCCGAAACGAGGCCGACGGCGACGTGCGCTACGCCGTGCTCGAGGCGTCCACCGTGTCCGGGATCCTGCACGCGAGTCTG
TACCTCGACGCCGTCGTGCTGCCCTACTACACGGGCACGGACGCGCTCCGGTGGTCGCGGTTCTCCGGCAAGTGCGCCAC
CTGCCTCTGCCGAATGGAGCCTCTGGTCGTGGGCGGCCGGACGGTGCTCTACCGGGGTCTGTCCAAGACAGCGCTGGCCA
TCATTTTCGCGCTCTGCTCCAGGATGGTGTGCCGGATCTACGGCGAGGAGCGGCTGAGCGCGTGGACGCGGTCGGCGCTG
GAGGTCGCGAGCTGGCTTTTCGTGTCTTGCGACGCCGTGTACCTCGCCGGTTGGGTGATTGCCGAGGGTGCCATGGCGAG
CGCGGTCGTGTACGGACTCGTCGCCTGGCTGGTGTTCCTGTGTGTGTTTGGGAAGGTTTACAGATTCTTGGCGTGGGTGG
AGAACAGGCAGGTCCAATGGAAACCAAGCCTTACCTGCCACAATGTGGTTTGATCA------------------------
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>chr4D_1094
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---------ACGAGGCAGATCGTCAAGTGCACCAGGTGGCAGCTGGAGGAGACCACCGACCTCATCACCTGCCCTTACCA
CTACTACTGCGACAGCTCCTACCCGGGCGACTACTCGGCTGCCGTCGGCGCCCTCGTCGCCGTTTTAGCCCTTTATTGCC
TCCTGTCCGCGGCGGCCTTCACGGTGGTAGAGATCGTCAGGGCTGGCGGCGGCAGCC---CGGCGACGGCGGGCGGTGGC
GTCTGGCGGATCAAGCGGAAGTACCTGGTGCCGTCGGGGCCCTTCTTGATGCCGCTGGTGCTGCTGGTGCTCGCCAAGGG
GCAGCGGATCAACGCCGTCTTCCCGCTCGCGCGGCTCGGCCCGGCATTGCTGCTCACGCTGCAGGCGTCGGCGCTGGCGT
TCCGGAACGAGGCCGACGGCGACGTGCGCTACGCCGTGCTCGAGGCGTCCACCGTGTCCGGGATCCTGCACGCGAGCCTG
TACCTGGACGCCGTCGTGCTGCCCTACTACACGGGCACGGACGCGCTCCGGTGGTCGCGGTTCTCCGGCAAGTGCGCCAC
CTGCCTCTGCCGGATGGAGCCTCTGGTGGTGGGCGGCCGGACGGTGCTCTACCGGGGCCTGTCCAAGACAGCGCTGGCCA
TCATTTTCGCGCTCTGCTCCAGGATGGTGTGCCGGATCTACGGCGAGGAGCGGCTGAGCGCGTGGACGCGGTCGGCGCTG
GAGGTCGCGGGCTGGCTTTTCGTGTCTTGCGACGCCGTGTACCTCGCCGGCTGGGTGATTGCAGAGGGTGCCATGGCGAG
CGCGGTCGTGTACGGGCTCGTCGCCGGGCTGGTGTTCTTGTGTGTATTTGGGAAGGTTTACAGATTCTTGGCGTTGGTGG
AGAACAGGCAGGTCCAATGGAAACCAAGCCTTACCTGCCACAATGTGGTTTGATCA------------------------
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>chr4A_1094
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---------ACGAGGCAGATCGTCAAGTGCACCAGGTGGCAGCTGGAGGAGACCACCGACCTCATCACCTGCCCTTACCA
CTACTACTGCGACAGCTCCTACCCGGGCGACTACTCGGCTGCCGTCGGCGTCCTCGTCGCCGTTTTGGCCCTTTACTGCC
TCCTGTCCGCGGCGGCCTTCACCGTGGTAGAGATCGTCAGGGCTGGCGGCGGCGGTGGCTCGGCGACGGCGGCCGGTGGC
GTCGGGCGGATCAAGCGGAAGTACCTGGTGCCGTCGGGGCCCTTCATGATGCCGCTGGTGCTGCTGGTGCTCGCCAAGGG
GCAGCGGATCAACGCCGTCTTCCCGCTTTCGCGGCTCGGCCCGGCATTGCTGCTCACGCTGCAGGCGTCGGCGCTGGCGT
TCCGGAACGAGGCCGACGGGGACGTGCGCTACGCCGTGCTCGAGGCGTCCACCGTGTCCGGGATCCTGCACGCGAGCCTC
TACCTGGACGCCGTCGTGCTGCCCTACTACACGGGCACGGACGCGCTCCGGTGGTCGCGGTTCTCCGGCAAGTGCGCCAC
CTGCCTCTGCCGGATGGAGCCGCTGCTCGTGGGCGGCCGGACGGTGCTCTACCGGGGCTTGTCCAAGACAGCGCTGGCCG
TCATTTTCGCGCTCTGCTCCAGGATGGTGTGCCGGATCTACGGCGAGGAGCGGCTGAGCGCGTGGACGCGGTCGGCGCTG
GAGGCCGCGGGCTGGCTTTTCGTGTCTTGCGACGCCGTGTACCTCGCCGGCTGGGTGATTGCCGAGGGCGCCATGGCGAG
CGCGGTCGTGTACGGGCTCGTCGCCGGGCTGGTGTTCTTGTGTGTATTTGGGAAGGTTTACAGATTCTTGGCGTGGGTGG
AGAACAGGCAGGTCCAATGGAAACCAAGCCTTACCTGCCACAATGTGGTTTGATCA------------------------
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>SNPs
-----S--------------------------------------------------------------------------
---------------------------------------------S------------------SSSSS-----------
------------------S-------------------------------------------------S-----------
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-----------------------------------------------------SS----------SSS------------
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--------------------------------------------------S-----------------------SSSSSS
----------------S---------------------------------------------------------------
-----S----------------------------------------S------------------------S--------
---------------------------------S-------S--------------------------------------
---------------------------S-----------S------------------------------SSSSSSSSSS
SS------------S--------------S---------------S-SSSSSSSSSSSSS--------------------
---S----S-------S-------------------------------------S-------------------------
-----------------------------------------------S--------------------------------
---------------------------------------S----------------------S-S---SSS---------
----------------------------------------S---------------------------------------
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-------------------------------------S--S---------------------------------------
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-------------S-----------------------S------------------------------------------
-----------------------------------------------------------------------------S--
S--------------------------S-----------------------------------------------S----
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--------------------S-----------------------------------------------------------
-----------------------------------------S--SS-SSSS---------------S-------------
------S---------------------------------SS-------S------------------------------
------S--------SSSSS-SSS-----------------------------------------------------S--
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------------------S------------------------S------------------------S-----------
----------------------------------------------------------S---------------------
----------------------------------------S------------------------S------------S-
----------------------------S------------------------------------------S--------
--------S-S---------------------------------------------------------S-----------
--------------------------SS-------S--------------------------------------------
--------------------------------------------------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSS
>forward_2157
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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---------------------------------------------------------CGCTCGCCTACCAACCATTA---
--------------------------------------------------------------------------------
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-------------------
>reverse_3987
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
------------------------------------------------------------------TTTCCCCCTGAAGC
CATTCC--------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------
