>input_sequence_62677
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------------------ATGGCACTTAAGTTG
GCAGGCTTCTCAAAGCAACCATGCTGCAGCCGCCCTCAAAACCTTTCAACACTCCTTGAATTGCACGTCTCTCCCTCTCC
CTCCCTTTCTCTACATACAAATACACACACGCATACAACCCCTATAAATACTACTAAGAAACCACGTGAAGCAAGCACCC
GTGCTCTCATCTTCCTTCCTCACAGCCTTCCATCTTCCTCTACTCTATCTACTCCAGCATATATGGGTGGATCTACTAAC
CTTCCTCCTGGTTTCCACTTCTTCCCCTCCGACGAAGAACTCGTCATCCATTTCCTCCGGCGCAAGGCGGCTCTCCTCCC
ATGCCGACCTGACATCGTCCCTACACTGCCTCAGAATCGCTACGATCCATGGGAGCTGAATGGTATGTACCTAATACTTT
CTTTCACAAACCTTTGTGCATATCACAAGTAATGTCTAGTCCTGATTCTGACAACTCTTTCAAGGCAAAGCACTTCAAGC
AGGGAACCAGTGGTACTTCTTTAGCCAAGCAACACAGAGTAGGGCCTCACGAAATGGGTGCTGGAATCCCGTCGGTGCCG
ATGAGGCAGTAAGTAGTGGCGGCTCTCATGTCGGCCTGAAGAAGACACTCGTCTTCTCCATTGGGGAGCCCTTTCAGGCG
ACCAAAACCAACTGGGTTATGCATGAGTACCACTTACTTGACGGGAATGTGG------GTGCCAGCACTTCAGGTAGTTC
ACGCAAGCGGTCTCACAAGAAGAAAGGCCAACCAGACAAAGTGAGTGCTGCATACATGTTATTGCACCTAACATTTTCTT
AAACTCTGCATTTATAGCATTATCATATACGCATGACAAACATGTCCAACATGCATGGATGATCATCACAGGAATGCAGC
AATTGGGTGGTG-TGTCGGGTGTTCGAGTCGAGCTACGATTCGCAAGTGACCTTCCACG--AGGAGGACATGGAGCTTTC
ATGCTTAGACGAGGTGTTCCTATCCCTGGATGACTATGATGAAGTCAGTTTGCCGAAGAATTAG----------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------------------------------
>chr2A_1_TraesCS2A01G306800
CTAGTAGTTCACTTCAGGTAAAACACCTGCAGTGACATGAACCGACACGAGTAATGTTTGCTA-TACTA-ACTATTAAAA
CCTGAAGAATATGAAACGTCTGGTATTGCCTTCGAAAATAGAAGTAACAAACAAAATTATCTTGTGTTTACAATTATTTG
AAAATATCCCTGAAATATTGGGGCTGGGGAAT-----ATAGTACGCACTTCGGCTATAAAGATCACAAGCATGCATATCA
GCAGTCAAAACCAAATCAAATTACTATTTGTTGGTCCAAACAAATTCAAGGTGCTATTTGATGCATGATTGCTTGATATC
TACACGATATCCAACACACGTCAAATAAGAGAGAAAGTC-AAAACTTCGGTCTAATCAGCACAATAATTTAATGGCAAGA
GATGGGGTTTCGCTTACTTCTGGTATC----------AGATAATTGTTGATTCTGTCGTCCCACCTAGCTCGTCATTCAC
TTCTCCTGATCTCAGATATGGATGGGCATATGTGAGGTTTGAGAAAACTCCGGTCACATGATATTACGCTATATTGACAG
TTCTCTTGGGCAGACATGGTATTTTGAAGTGTACCTAAAGTAGCACACAAGCATCATGTTAGATTATGATGCAAGAGTCT
GCTACTGAAACTTTGGATGGATGAGATGGTTATGCAATGTAAGATATCCAAGCGGAGTCAACGAAGATCAAATACATCCG
CAAAAGGCTATCCTAAATTCCTAATTAAGGACACCCAGACCAGCATCATTGCTAGGCAAGAAACTGTATGTCTTGATCTC
CGGCTTTGTTATAAAATATGTAGAGCATGATGAGGCACCATGCATGCATGCATT---GATGGACTCTGTTAGTTAGTAAC
GATTCATCTAAGAAGTAGAGAAATTTGCAGTAA---CTCTGAACATCAAATATATAGGAGATACTCCTCTGTCCAAATCC
AACATTAGTGTTTGCATAGCATCATTAGCTCCCTCCATAT-AAAAAATGGTGAGGACAAGGAAGCATGGCACTTAAGTTG
GCAGGCTTCTCAAAGCAACCATGCTGCAGCCGCCCTCAAAACCTTTCAACACTCCTTGAATTGCACGTCTCTCCCTCTCC
CTCCCTTTCTCTACATACAAATACACACACGCATACAACCCCTATAAATACTACTAAGAAACCACGTGAAGCAAGCACCC
GTGCTCTCATCTTCCTTCCTCACAGCCTTCCATCTTCCTCTACTCTATCTACTCCAGCATATATGGGTGGATCTACTAAC
CTTCCTCCTGGTTTCCACTTCTTCCCCTCCGACGAAGAACTCGTCATCCATTTCCTCCGGCGCAAGGCGGCTCTCCTCCC
ATGCCGACCTGACATCGTCCCTACACTGCCTCAGAATCGCTACGATCCATGGGAGCTGAATGGTATGTACCTAATACTTT
CTTTCACAAACCTTTGTGCATATCACAAGTAATGTCTAGTCCTGATTCTGACAACTCTTTCAAGGCAAAGCACTTCAAGC
AGGGAACCAGTGGTACTTCTTTAGCCAAGCAACACAGAGTAGGGCCTCACGAAATGGGTGCTGGAATCCCGTCGGTGCCG
ATGAGGCAGTAAGTAGTGGCGGCTCTCATGTCGGCCTGAAGAAGACACTCGTCTTCTCCATTGGGGAGCCCTTTCAGGCG
ACCAAAACCAACTGGGTTATGCATGAGTACCACTTACTTGACGGGAATGTGG------GTGCCAGCACTTCAGGTAGTTC
ACGCAAGCGGTCTCACAAGAAGAAAGGCCAACCAGACAAAGTGAGTGCTGCATACATGTTATTGCACCTAACATTTTCTT
AAACTCTGCATTTATAGCATTATCATATACGCATGACAAACATGTCCAACATGCATGGATGATCATCACAGGAATGCAGC
AATTGGGTGGTG-TGTCGGGTGTTCGAGTCGAGCTACGATTCGCAAGTGACCTTCCACG--AGGAGGACATGGAGCTTTC
ATGCTTAGACGAGGTGTTCCTATCCCTGGATGACTATGATGAAGTCAGTTTGCCGAAGAATTAGAACCTTTGCTAGCACA
GTTGAGAGAATGGGTTTTGTGCCTACCATGCCATCTGATCATGATGATACTCATAAGAGAAACATCTTTCTTAATGATCA
AATGATCTGGTAGGTATTAAACCTAATTCACTCCATCTAGACCAGAGATGTAATTATTCTCCTCCAAGAAGGTGTGTGAA
ACAAATTTAATATGTTTTGACTACTATGGAATATAAGTGTGTAATGGCCTAATGGCCACTCTTTCAACTAGCAATTAATC
AAGCATTTGATGGTTTCTCCTAAATAGCAAAGGGCATGTCCTGAATGATCATTGTATGAAGTCAACAGTGAGCGCCATGA
GGTGGCTTGTGGGGGTTAGGA-----------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------C-TTG----GGACTAGTTTT
GGAGCGATGCAGGCAATGCTTGTGCATGCCGACTTCTCCTCCAACTCATTGTGTTCCTATGTGTTGTGAACAATGTTATT
GTGCCCACAAAGCAAAGGCCAAATGGAGTCAGTCAGATGCTTTTAGATCACAAGGATAAAAAGAAAGAGCATGGTTGGAA
CTTGTGCAAGCATATTGCTATTGATGTCATCAATGAGATAAGCTCCAAAAGGTAATAATGTATATGTGTGTCCATTCCAG
ACAGAAAGTGTGCATGTGTGGGGAAGTGGTACCACCATGCACTGGTAAGACTTGCCAAACCAGTTACCTGAAAATCAGGT
AACCACTGAAGTTTCTAAACTTGTTTAGTTATTTGCAGTGCATACTGCATAGTGCACTCGCTTTAGATCACTAATCATGG
ATAGCAACTTTTTAGTAACTTCTTTTAGTACTAAATGGGTTG---TTGACTTCTTAATCCAACCCTAGAAATGCGATGAT
ATAATTCTGTCTGTCCTAAGAGAAGTTGGTA-----GTGCCTCCATCAATAGTTTTAGCATGCTTGTCGTTACTTTTCAT
GGCTTGCAATGCATGCTTACATCATAAAAATGTGAAACAAAAAACATATATAAAGAAAGAGAAAAACTAAACTAAC
>chr2D_1
CTAGTAGTTCACTTCAGGTAAA-CACTTGCACTGACATGAACCGACACGAGTAATGTATGCTA-TACTACACGATTAAAA
CCTGAAGAATATGAAACATCTGGTACTGCCCTCAAAAATAGAAGTGACAAACAAAATTATTTTGTGTTTGCAATTATTTG
AAAATATCCCTGAAATATTGGGGCTGGGAAAC-----ATAGTATGCACTTCGGCTATAAAGATCACATGCATGCATATCA
GCGGTCAAAACCAAATCAAATTACTATTTGTTGGTCCAAACAAATTCAAGGTGCTATTTGATGCATGATTGCTTGATATC
TACATGATATCCAACACACGTCAAATAAGAGAGA--GTC-AAAACTTCGGTCTAATCAGCACAATAATTTAGTGGCAAGA
TGAGGTTTCGCA-TTACTTGCGCGTGCAACCTAAACAAGACAATTGTTGATTCTGTCATCTCACCTAGCTCGTCATTCAC
TTCTCCTGATCTCAGATATGGATGGGCATATGTCAGGATTGAGAAAACTCCGATCACATGATATTACGCTATATTGACAG
TTCTCTTGGGCAGACATGGTACTTTGAAGTGTACCTAAAGTAGCACACAAGCATCATGCTAGATTATGATGCAAGAGTCT
GCTACTGAAACTTTGGACGGATGAGATGGTTATGCAATGTAACATATCCAAGCAGAGTCAACGAAGATCAAATACATCCG
CAAAAGGCTATCCTAAATTCCTAATTGAGGACACCCAAACCAGCATCATTGCTAGGCAAGAAACTGTCTGTCTTGCTCTC
CGGCTTTGTTATAAAATATGTAGAGCATGATGAGGCACCATGCATGCATGCATTGATGGG---CTCTGTTAGTTCGTAAC
GATCCATCTAAACAGTAGAGCAATTTGCAGTAAGTGCTCCGAACATCAAATATATAGGACATA---CTCTGTCCAAATCC
AACATTAGTGTTGGCATAGCATCATTAGCTCCCTCCATAT-AAAAA-TGGTGAGGAAAAGGAAGCATGACACTTAAGTTG
GCAGGCTTCTCAAAGCAACCATGCTGCAGCCGCCTTCAAAACCTTTCAACACTCCTTGAATTGCACGTCTCTCCCTCTCT
CTCCCTTTCTCTACGTACAAATACACACACGCATACAATCCCTATAAATACTACTAAGAAACCACGTGAAGCAAGCACCC
G-----------------CTCGCAGCCTTCCATCTTCCTCTACTCTATCTACTCCAGCATATATGGGTGGATCTACTAAC
CTTCCTCCTGGTTTCCATTTCTTCCCCTCCGACGAAGAACTCGTCATCCATTTCCTCCGCCGCAAGGCGGCTCTCCTCCC
ATGCCGACCTGACATCGTCCCTACGCTGCCTCAGAATCGCTACGATCCATGGGAGCTGAATGGTATGTACATAATACTTT
CTTTCACAAACCTTTGTACATATCACAAGTAATGTCTAGTCCTGATTCTGACAACTCTTTCAAGGCAAAGCACTTCAAGC
AGGGAACCAGTGGTACTTCTTTAGCCAAGCAACACAGAGTAGGACCTCACGAAATGGGTGCTGGAATCCCATCGGTGCCG
ATGAGGCAGTAAGTAGTGGCGGTTCTCATGTCGGCCTGAAGAAGACACTCGTCTTCTCCATTGGGGAGCCCTTTCAGGCG
ACCAAAACCAACTGGGTTATGCATGAGTACCACTTACTTGACGGGAATGGGG------GTACCAGCAGTTCAGGTAGTTC
ACGCAAGCGGTCTCACAAGAAGAAAGACCACCCAGACAAAGTGAGTGCTGCATACATGTTATCGCATCTAACATTTTCTT
ATACTCTGCATT--TAGCAGTATCATATACGCATGACAAACGTGTCCAACATGCATGGATGATCATCGCAGGAATGCAGC
AATTGGGTGGTG-TGTCGGGTGTTCGAGTCGAGCTACGATTCGCAAGTGAGCTTCCACG--AGGAGGACATGGAGCTTTC
ATGCTTAGACGAGGTGTTCCTATCCCTAGATGACTATGATGAAGTCAGTTTGCCGAAGAATTAGAACCTTTGCTAGCACA
TTTGAGAGAATGGGTTTTGTGCCTACCATGCCATCTGATCATGATGATACTCATAAGAGAAACATCTTTCTTAATGATCA
AATGATCTGGTCGGTATTAAACCTAATTCACTCCATCTAGACCAGAGATGTAATTATTCTCCTCCAAGAAGGTGCATGAA
ACAAATTTAATATGTTTTGACTACTATGGAATATAAGTGTGTAATGGCCTAATGACCACTCTTTCAACTAGCAATTACTC
AAGCATTTGATGGTTTCTCCTAAATAGCAAAGGGCATGTCCTGAATGATCATTGTATGAAGTCAACAGTGAGCGCCATGA
AGTGGCTTGTGGGGGGTAGGA-----------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------CTT-----AGGAGTAGTTTT
GGAGCGATGCAGGCAATGCTTGTGCATGCCGACTTCTCCTCCAACTCATTGTGTTTCTATGTGTTGTGAACAATGTTATT
GTGCCCACAAAGCAAAGGCCAAATGGAGTCAGTCAGATGCTTTTAGATCACAAGGATAAAAAGAAAGAGCATGGTTGGAA
CTTGTGCAAGCATATTGCTATTGATGTCATCAATGAGATAAGCTCCAAAAGGTAATAATGTATATGTGTGTCCATTCCAG
ACAGAAAGTGTGCATGTGTGGGGAAGTGGTACCACCATGCACTGGTAAGACTTGCCAAACCAGTTACCTGAAAATCAGGT
AACCACTGAAGTTTCTAAACTTGTTTAGTTATTTGCAGTGCATACTGCATAGTGCACTCGCTTTAGATCACTAATCATGG
ATAGCAACTTTTTAGTAACTTCTTTTAGTACTAAATGGGTTG---TTGACTTCTTAATCCAACCCTAGAAATGCGATGAT
ATAATTCTGTCTGTCCTAAGAGAAGTTGGTA-----GTGCCTCCATCAATAGTTTTAGCATGCTTGTCGTTACTTTTCAT
GGCTTGCAATGCATGCTTACATCATAAAAATGTGAAACAAAAAACATGGATAAAGAAAGAGAAAAACTAAACTAAC
>chr2B_3
--AGTAGTTCACTTCAGGTAAA-CACTTGCACTCACATGAACCGACAGGGGTAATGTATGCTAATACTA-ACTATTAAAA
CCTGAAGAATATGAAAAACCTGGTATGGCCCTCAAAAATAAAAGTGACAC------------------------------
AAAATATCCCTGAAATATTGGGGCTGAGGGAACATATATAGTATGCACTTCGGCTGTAAAGATCACAAGCATGCATATCA
GCGGTCAAAACCAAATCAAATTACTATTTGTTGGTCCAAACAAATTCAAGGTGCTATTTGATGCATGATTGCTTGATATC
TACACGATATCCAACAAACATCAAAAAAGAGAGAAAGTCAAAAACTTTGGTCAAATCAGCACAATAATTTAATGGCAAGA
TTAGGTTTCGCA-TTACTTCTGGTATC----------AGATAATTGTTGATTCTGTCATCTCACCTAGCTCGTCATTCAC
TTCTCCTGATCTCAGATATGGATGGACATATGGGAGGATTGAGAAAACTCCAATTACATGATATTACGCTATATTGACAG
TTCTCTTGGGCAGACATGGTATTTTGAAGTGTACCTAAAGTAGCACACAAGCATCATGTTTGATTATGATGCAAGAGTCT
GCTACTGAAACTTTGGATGGATGAGATGGTTATACAATGTAACATATCCAAGCGGAGTCAGCGACGATCAAATACATCCG
CAAAAGGCCATCCTAAATTCCTAATTAAGGACACCCAAACCAGCATCATTGCTAGGCAAGAAACTGTCTGTCTTGCTCTC
CGTCTTTGTTATAAAATATGTAGAGCATGATGAGGCACCATGCATGCATGCATT---GGG---CTCTGTTAGTTCGTAAC
GATCCATCTAAACAGTAGAGCAATTTGCAACAAATGCTCTGAACATCAAATATATAGGAGATACTCCTCT--CCAAATCC
AACATTAGTGTTTGCGTAGCATCATTAGCTCCCTCCATATAAAAAA-TGGTGAGGAAAAGGAAGCATGACACTTAAGTTG
GCAGGCTTCTCAAAGCAACCATGCTGCAGCCGCCTTCAAAACCTTTCAACACTCCTTGAATTGCACGTCTCTCCCTCTCT
CTCCCTTTCTCTACGTACAAATACACACACGCATACAATCCCTATAAATACTACTAAGAAACCACGTGAAGCAAGCACCC
GTGCTCTCATCTTCCTTCCTCACAGCCTTCCATCTTCCTCTACTCTATCTACTCCAGCATATATGGGTGGATCTACTAAC
CTTCCTCCTGGTTTCCACTTCTTCCCCTCCGACGAAGAACTCGTCATCCATTTCCTCCGCCGCAAGGCGGCTCTCCTCCC
ATGCCGACCTGACATCGTCCCTACGCTGCCTCAGAATCGCTACGATCCATGGGAGCTGAATGGTATGTACCTAATACTTT
CTTTCACAAACCTTTGTACATATCACAAGTAATGTCTAGTCCTGATTCTGACAACTCTTTCAAGGCAAAGCACTTCAAGC
AGGGAACCAGTGGTACTTCTTTAGCCAAGCAACACAGAGTAGGACCTCACGAAATGGGTGCTGGAATCCCATCGGTGCCG
ATGAGGCAGTAAGTAGTGGCGGTTCTCATGTCGGCCTGAAGAAGACACTCGTCTTCTCCATTGGGGAGCCCTTTCAGGCG
ACCAAAACCAACTGGGTTATGCATGAGTACCACTTACTTGACGGGAATGGGG------GTACCAGCAGTTCAGGTAGTTC
ACGCAAGCGGTCTCACAAGAAGAAAGACCACCCAGACAAAGTGAGTGCTGCATACATGTTATCGCATCTGACATTTTCT-
-TACTCTGCATT--TAGCAGTATCATATACGCATGACAAACGTGTCCAACATGCATGGATGATCATCGCAGGAATGCAGC
AATTGGGTGGTG-TGTCGGGTGTTCGAGTCGAGCTACGATTCGCAAGTGAGCTTCCACG--AGGAGGACATGGAGCTTTC
ATGCTTAGACGAGGTGTTCCTATCCCTAGATGACTATGATGAAGTCAGTTTGCCGAAGAATTAGAACCTTTGCTAGCACA
GTTGAGAGAATGGGTTTTGTGCCTACCATGCCATCTGATCATGATGATACTCATAAGAGAAACATCTTTCTTAATGATCA
AATGATCTGGTAGGTATTAAACCTAATTCACTCCATCTAGACCAGAGATGTAATTATTCTCCTCCCAGAAGGTGCATGAA
ACAAATTTAATATGTTTTGACTACTATGGAATATAAGTGTGTAATGGCCTAATGGCCACTCTTTCAGCTAGCAATTACTC
AAGCATTTGATGGTTTCTCCTAAATAGCAAAGGGCATGTCCTGAATGATCATTGTATGAAGTCAACAGTGAGCGCCATGA
AGTGGCTTGTGGGGGTTAGGA-----------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------C-T-----AGGACTAGTTTT
GGAGCGATGCAGGCAATGCTTGTGCATGCCGACTTCTCCTCCAACTCATTGTGTTTCTATGTGTTGTGAACAATGTTATT
GTGCCCACAAAGCAAAGGCCAAATGGAGTCAGTCAGATGCTTTTAGATCACAAGGATAAAAAGAAAGAGCATGGTTGGAA
CTTGTGCAAGCATATTGCTATTGATGTCATCAATGAGATAAGCTCCAAAAGGTAATGATGTATATGTGTGTCCATTCCAG
ACAGAAAGTGTGCGTGTGTGGGGAAGTGGTACCACCATGCACTGGTAAGACTTGCCAAACCAGTTACCTGAAAATCAGGT
AACCACTGAAGTTTCTAAACTTGTTTATTTATTTGCAGTGCATACTGCATAGTGCACTCGCTTTAGATCACTAATCATGG
ATATCAACTTTTTAGTAACTTCTTTTAGTACTAAATGGCTTG---TTGACTTCTTAATCCAACCCTAGAAATGCGATGAT
ATAATTCTGTCTGTCCTAAGAGAAGTTGGTAGTGTAGTGCCTTCATCAATAGTTTTAGCATGCTTGTCGTTACTTTTCAT
GGCTTGCAATGCATGCTTACATCATAAAAATGTGAAACAAAAAACATGGATAAAGAAAGAGAAAAACTAAACTAAC
>chr3A_1518
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------AGCCATGCAGCACATAGTAGGACCTCACGAAATGG-TACTGGAGTCCCATCGGTACTG
ATGGGGCAGTCAGTAGTGGCGGTTTTAATGTCGGTCTGAAGAAGACGTTCATCTTCTCCATTGGGGAGCCCTTTCAGGCG
ACCAAAATAACCTGGGTGATGCATGAGTACCACTTACTTACGTGAAT--GGGGGTATAGTAAGAGCACCTCAGGTAGTTC
ACACAAGTGGCCTCGCAAGAAGAAAGGCAACCCAGACAATGTGAGT-------ACATGTTATTGTATCTAGCATTTTGTT
AAACTATGCATT--TAGCATCATAATATATGCATGACAAACGTG-CCAACATGCAT---------------GGATGCAGA
AATTGGGTGGTAATGCCGGGTGTTTGAGCCAAGCTATGATTCGCAAGTGATCTTCCACACAAGGATGACATGGAATTTTC
ATGCTTAGATGAGGTGTTCCTATCCCTAGATGACTATGATGAATTTAGTTTACCGAAGAATTAGAACCTTTGCTAGCATA
GTTGATAGAATGAGTTTTGTGCGTATGATGCCATCTGATCATGGTGATACACATAAGAGAAGCTTCTTCCTTAATGATCA
ATTGGTATGGTAGGCATAAG-CCTAATTAGCTCCATCTAGAACAAAGATGTAATTATTCTCCTCAAAG-AGGTGTATAAA
ATATATTTAATATGTTTTGACTACTACAGAATATAAGTGTGTAATAGCCTAATGGGCAGTCTTTCAACTAGCGCTTACTC
AATCATTTGATGGGTTTTCC----TAGCAAAGGGCATGTCCTGGATGATCATTGTATGAGGTCA-CAGTGAGCACTATAA
AGAGGCTTGTGGGGGTTATGA-----------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------C-TTAGCTAGGACTGGTTTT
GGAGAGATGCAAGCAATGCTTGTGCCTGCCAACTA------CGACTCATTGTGTTTCTATGTGTTGTGAACAATGTTATT
GTGCCCACAAATCAAAGGCCAAAATGAATCACTCAGATGCTTTTAGATCACATGGATAAAAAT---GAGCATGGTTATAA
CTTCCGCAAGCATATTGCTATGGA--TCATCAATGAGATGAGCTTCAAAAGGTAATAATGTATA----------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------------------------------
>chr3B_1530
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------CAGTGTAGGACCTCATGAAATGG-TACTGGAGTCCCATCGGTACTG
ATGGGGCAGTAAGTACTGGCGGTTCTAATGTCGGTCTGAAGAAATA----ATCTTCTCCATTGGGGAGCCCTTTCAGGCA
ACCAAAATAACCTGGGTGATGCATGATTACCACTTACTTGACGTGAATGGGGGGTATAGTAAGAGCACTTCAGGTAGTTC
ACACAAGTGGCATCGCAAGAAGAAAGGCAACCCAGACAATCTGGGTGCTGCATCCATGTTATTGTATCAAGCATTTTGTT
AAACTATGCATT--TAGCATCATCATATGTGCATGACAAACGTG-CCAACATGCATGGATGATCATTGCAGGGATGCAGA
AGTTGGGTGGTAATGCCGGGTGTTTGAGTCAAGCTATGATTCGCAAGTGACCTTCCACA--AGGATAACATGGAGTTTTC
ATGCTTAGATGAGGTGTTCCTATCCCTAGATGACTATGATGAATTTAGTTTACAGAAGAATTAGAACCTTTGCTAGCATA
GTTGATAGAATGAGTTTTGTGCCTATGATGCCATCTGATCATGGTGATACACATAAGAGAAGCTTCTTTCTTAATGATCA
ATTGGTACGGTAGGCATAAG-CTTAATTAGCTCCATCTAGACCAAAGATGTAATTATTCTCCTC----AAGGTGTATAAA
ATATATTTAATATGTTTTGACTACTACAGAATATAAGTGTGTAATGGCCTAATGGGCAGTCTTTCAACTAGCGCTTACTC
AAGCATTTGATGGGTTTACCTAAATAGCAAAGGGCATGTCCTGGATGGTCATTGTATGAGGTCA-CAGTGAGCACTATAA
AGAGGCTTGTGGGGGTTATGAATTAGAGCATCTCCAGCCGTTGGCCCCCCAGGAGGCGCTAAAAATCGCCCCCTGGGGGC
GCACCGGCGCTAAACCGCGCGCTGGGGGCGTGATGCCCCCCAGTCGCGGCGCCCACGTTTTTTTGAAAATTTTAATTACG
GCACAAACACGGTGCAAATTCAACCAAACTTCCGCGAGTTCGTTCATATTTAAACATATTTTACAAAAAAGGAAAAAAAA
CTACTAGGCTGCTCCTCGCCGTCTCCCTCGCCGCTCCTCGCCGTCCGCCGCCCCTTGCGGTTCTACATGCCGAGGAGGCT
GTAGAACCGCGTGTAGTCGCCGTCGTCGTCATCGTCGTCGTCGTCGCCTCCTCCGCCGCGGCCGTCGTCCCTGCTGCAAC
CCTCCCCCGGTTGGCGCGGTGGGTTGGACGGTCCGGGGGCATCCTCGTCGTCGTCGCTGACGAGGATCACGACGCCGTGC
TCGTCCTCGCGCCCACGTTTGCGGGCGTCTATCTCCTCCAGGGCCCGGTGCTGCCGGACCATCTCGTCGCGGAGGTAGTC
GTCCCACGCCCACTGTAGGGCCTCCTCGTTAGAGAAGCCACACCGGGCTATCTCCTCGTACTCCGCGGGGAGGTCGGGCT
CCGGCTTTAGCGCGACGAGGACGAAGTGGCCAGAGGGGGGTGGAGTCGCCGATGCGGACGCTGGAGCTGCGTCTGCGCCC
GCTGACAGGCGTGTCCTGGGGTTCCGGCTTAACGGAGCGGAGGCAGGGAGAGCCGGACGAGCGGCCGGACGAGGAGGAGG
ACGCCCCGTGCTGCTCCATGCGCCTCGGCGTCCACGAGCTCCCACGTCAGCGAGAGAAGGACGGGGGAGCGAGGTACTCG
AGCCTCGGCGTGTTGCCGCCCTCGATGTACTCGAGGACGGCCTCAGCGTGCGGCCTGGCACGCCCCACCATCGGCGCCGC
CCCTCGGAGTTGAGCCTTCCGGAGGGCACGGCGCCGTTCATGGCCTCGAGCTGTTCGGCGTGGCGGCGGCGGAAGTATGG
CTCCCAGAGCGGGCTGTCGGGGACGTACCGCGGTCCTTCCCTCGCCGCGTGCGGCAGGGGGGCGTGGATACGTGCGATCT
CCGCACGCCGCGCCGCCCCGGTGGGTGGTGGTGGCACCGGGACACCGCCGGCGCTGGTTCTCCATGCCCCGGGCACCCGC
ATGTACGGCGGGACCGGGTACTCGGCCTCGAAGAGGAGCCGAGCTTCGTCCTCGTGAAGATGGCGGCGGCCGAAGCCGTT
CGCCGCCGTGCCGTCGCCTGGGAAGCGCTCGGCCATGCTTTGAACTGGAGAAGGCGAGAGAAGAGGGAGGAAGGGGGAGA
AATGGCGCATTTGCGGTGGAGGCTTTGTATGTGTCTCGGGCGCGCTGGGGGTCGGCTTATATAGACGGAGAGGCGCCGCA
TACGCGTGGCGGGCGAGGGGACGCACGTCGTCTAGTCTTCACTGCGCCGCCCGTGAGGCATCAATGGAGGCTGACCGGCG
CGGCAGCGCGCGACAGGTTTGGCATTGATTCGCCACGGGAAACGAGGCAATGAGGACGACGAAGCGGCGTGAAGAGCGAT
GAGTCGCTGGCAAGGAGGGTCCACGGCTCTTTCGCGCCAAAAACGATTCGCCCGGTGCCCCCGAGCGCCCCCCAGCGCGC
TGGGTTCGGGTTGGGTCCGCCGACGCCAATTTCGGCCTGAGCCGGCGAAAACTGGGCCCTTGGGGGCGCGATTGGGCCGA
TTTTTTGGCGCCGGCGGCCGAAAAGTCGCCTGGGGGGCCGGGGGCGCGGCTGAAGATGCTC-TTAGCTAGGACTAGTTTC
CGAGAGATGCAAGCAATGCTTGTGCCTGCCAACTA------CAACTCATTGCGTTTCTATGTGTTGTGAACAATGTTATT
GTGCCCACAAATCAAAGGCCAAAATGAGTCAGTCAGATGCTTTTAGATCACACGGATAAAAA---AGAGCATGGTTATAA
CTTCCGCAAGCATATTGCTATGGATGTCATCAATGAGATAAGCTCCAAAAGGTAATAATGTATATGTGTGTACATTGCAG
ACAGAAAGTGTGTAGGTGTGGGCAAGTGGTACCACCATGCAGTGGTGACGCTTGCCAAACCAG----------------T
AACCACTGAAGTTTGTAAACTTGTTTAATCATTTGCAGTGCATGATGCATAGTGCATTGGCTTTAGATCACTAATCATGG
ATAGGAACTGTTTAGCAACTTCTTTTAGTACTATATAAATGGGTATTGACTTCTTAATCCAACCCTAGAAATGTGATGAT
AT-ATTCTGTTTGTCCTAATTGAAGTT-----------------------------------------------------
----------------------------------------------------------------------------
>SNPs
----------------------S---S----S-------------------------S----------------------
-----------------S------------S--S-----------S--------------S--------S----------
-------------------------------S-----------S------------------------------------
--S-----------------------------------------------------------------------------
--------------------------------------------------------------------------------
SSS--SS-SS-SS--------------------------------------------S--S-------------------
-------------------------------------S--------------S---------------------------
--------------------------------------------------------------------------------
------------------------------------------S-------------------------------------
-------------------------------------S-----------------------------S-------S----
----------------------------------------------------------SSSSS-----------S-----
---S-------SS-------S-----------------------------------------------------------
----------------------------------------------S---------S-----------S-----------
----------------------------------S--------------------------------------------S
--------------S-----------------------S-----------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------------S--------------------
------------------------S-------------------------------------------------------
-----------------S--------------------------------------------------------------
-------------------------------------------S--------------------------S---------
----------------------S---------------------------------------------------------
-------------------------------------------------S----------S-------------------
------------------------------S-----------------------------------S-------------
------------SS---------------------------S-------------------------S------------
--------------------------------------------------------------------------------
---------------------------S----------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------------------------------S----
-----------------------------------------------------------------------------S--
--------------------------------------------------------------------------------
S-------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------------------S---------------
-------------------------------------------------------S------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------SS---------------------------
>forward_412
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------------------TGGCAAGA
GATGGGGTTTCG--------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------------------------------
>reverse_1385
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------ACTGCCTCAGAATCGCTACG------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------------------------------
>forward_1340
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------TCGTCATCCATTTCCTCCGG--------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------------------------------
>reverse_2401
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
GGTGGCTTGTGGGGGTTAG-------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------------------------------
