>input_sequence_62642
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------------------------------------------------------------------------ATGGCGAG
CCACGGAGGACACGACCACGACGCGCTCTGGGCCAAGCTCTGGGAGCTGGAGCTGCAGCTCGCGGCGTACAAGCTGCTGC
ACGCCGCGCGGCGCGGGGAGGAGGACGACGCGGACGCGGACGGCGTGCGGGAGCCCGCTGGGGCCGGCGCCTGCCGCCGC
GGCAGGCAGTACGACGCCTACATGCGCCGGCGCGACGCCAGGCGCGTGTCCGTCGCCGCGGTGGCCAAGAG---CCAGCA
GCAGCAGCAGCAGAGGCCGAGCGGCGTCAGTGTCACGCGCGCCGGCGGCAGGCCGAGCCCGCTCACCGTCAGGTGCGCCG
CTCGGGACACGCCGCAGGTGAGGAGGACGGTGCCGTCGGGAGTGTCCGCTGCGGCCACCCCGAGGAAGGAGCACGGCGCG
CTGCCACTGCCCAGGAGCAGGACGGTGAGAGGCGGCGCGCCTGAAGCGAGGCCGCAGTCGCACAGAAGGCGGAACAGCGT
CGGCGGCGACC---TGGGCGAGTGCGCCACGCCGAGGCCGTTCCTGAGGCGCGGCAGCGGGACCGGCGGCGCGATCGGGA
ACCTGCGGTCCCCGAGGGTGCACGACCTCCCCAGCGGCAGCCCGAGCCCGAGGCGGCCGCCGCAGGACCAGTTCGTCCCA
AAGGTGGCGGCCGGGCGCCACCTCCGGTCCGTGTCGGAGCTGCCGCTCCACGCGACGGTGGAGTCGCCGAGGTGGGCGGA
GACGCCGCGGCCGGCCCAGTCACGGGCCAGGAAGCGGTGGGGCAGCCTGGAGAGCCCGCCGCCGGCGATCTTCTCGGCCC
CGGCGGCCAACCCGCACATGGACCTGGCCAAGGGGCTCCGGAAGCTGCTGAGCTTCGTGAGGAAGGGCAAGAGCAGCGAG
CATCGGCGCTCCGACGGCGGACGTGAATCCGGCGACGGGAAGCCCGTGAAGGGGTGGACAGCTTGCTCCGTCCTTGATGG
CCCGTTCGAACGTGCGAGCCTGGAGGGGCACCGGTTCCCCATGACACGGGCAGTCGGCACCTCCGGATGA----------
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>chr5D_1_TraesCS5D01G219600
GGCCATTGGGCGATGATGGCAGCAGGACGCCATTGTCAATCACTCCTGGAAGCAGCGTGCTGTACTCCAAGTATGCAGGA
AGCGAGTTCAAGGGTTCGGAAGGCGAGTACATCGTTCTCAGGTCATCCGACGTGATAGCCGTGCTGTCATCATAAGCTTG
TCCTGCCCTGCCCTGCTCATGTGAACTAGGAATTTTGATATTTAGTCCAAAACCTTGTTTGGTTATTGCTCTTTGCTTGT
GATTGGTGAATCGTGAATTGCTTCTTCGCTCCATCGTGGAAATGCTGCTTGATAG-TT---TAATAAGATGACCGCTTAG
ACTTCAGAAGTGGCTGTGTTTTGCTTCTAAGCGTCT--------TTGTTTGGTGGGCGTCTAAACGTTTGACAGATCGGC
AGGGTCAGCGTTTCTCACGAAGATTAGCTGACTGAAAATAACCTGCGCATGTGAAGAACGCTTGGTAGTTGTAGTAAAAA
AGCATGCAGACATTGCACTTGGCTCGGTTGGTGAACGACTATACTGGATAATACTACTCG----TCTGCCAGAGTTGGTG
TATCGGTACAGAGGATTTGTCTCTAGGAGGGTGAGGGTTTAGTCATACAAAA-TGCTACTCCCTCCATA-----------
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--------AAACTGATGCCACTCGGACAGCGAAAGGAAGATCTTATCAAGGATACAAAT--TTCTCCAGTCAATCCTGGC
GACCTAGCTTTTCCGAGCCCT-----------------------------------------------------GGACGC
GAGAAGCTGGCCAGGTCGACGCCGCCCTGCCGCCCCACCCGGTCAACCAAAAGCCCCTCATCGG---------------C
CGCGCGCGACCGAATCAAACAAACGCAACACAAACTACTCCAAAGGCCCCGTGCCGCTTTCCGCCGCCAATTAACCTCTG
CCT-CTGGAGTCGTCCGACACGGTCACACTCGCACCTCCAAACTTAATCACGCCGCGGCGACGCGCGCGTATATAGCCCG
CTCCGCCCAGCGCGCACCCTCCGGCACGGCACG-----CACAGGATTGTCTCTGTTTGTCTCCACGGGACCGATGGCGAG
CCACGGAGGACACGACCACGACGCGCTCTGGGCCAAGCTCTGGGAGCTGGAGCTGCAGCTCGCGGCGTACAAGCTGCTGC
ACGCCGCGCGGCGCGGGGAGGAGGACGACGCGGACGCGGACGGCGTGCGGGAGCCCGCTGGGGCCGGCGCCTGCCGCCGC
GGCAGGCAGTACGACGCCTACATGCGCCGGCGCGACGCCAGGCGCGTGTCCGTCGCCGCGGTGGCCAAGAG---CCAGCA
GCAGCAGCAGCAGAGGCCGAGCGGCGTCAGTGTCACGCGCGCCGGCGGCAGGCCGAGCCCGCTCACCGTCAGGTGCGCCG
CTCGGGACACGCCGCAGGTGAGGAGGACGGTGCCGTCGGGAGTGTCCGCTGCGGCCACCCCGAGGAAGGAGCACGGCGCG
CTGCCACTGCCCAGGAGCAGGACGGTGAGAGGCGGCGCGCCTGAAGCGAGGCCGCAGTCGCACAGAAGGCGGAACAGCGT
CGGCGGCGACC---TGGGCGAGTGCGCCACGCCGAGGCCGTTCCTGAGGCGCGGCAGCGGGACCGGCGGCGCGATCGGGA
ACCTGCGGTCCCCGAGGGTGCACGACCTCCCCAGCGGCAGCCCGAGCCCGAGGCGGCCGCCGCAGGACCAGTTCGTCCCA
AAGGTGGCGGCCGGGCGCCACCTCCGGTCCGTGTCGGAGCTGCCGCTCCACGCGACGGTGGAGTCGCCGAGGTGGGCGGA
GACGCCGCGGCCGGCCCAGTCACGGGCCAGGAAGCGGTGGGGCAGCCTGGAGAGCCCGCCGCCGGCGATCTTCTCGGCCC
CGGCGGCCAACCCGCACATGGACCTGGCCAAGGGGCTCCGGAAGCTGCTGAGCTTCGTGAGGAAGGGCAAGAGCAGCGAG
CATCGGCGCTCCGACGGCGGACGTGAATCCGGCGACGGGAAGCCCGTGAAGGGGTGGACAGCTTGCTCCGTCCTTGATGG
CCCGTTCGAACGTGCGAGCCTGGAGGGGCACCGGTTCCCCATGACACGGGCAGTCGGCACCTCCGGATGAGGCGCGTGGG
CTGGCATTACATGCCC----------------------------------------------------------------
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------TTAGCGTTTGTGACAGGCCGTCCACGGGTTTGGAGCAAGTTCTTTTCTCCTCCCTTTCGCTTTGGGTCCTGATA
ACGCCCACATCGGGTGACATACTAGA-CATCCGCCCA----TACACCATATGTGGTGTGAGCAGAAGGCAGCCTACACCG
GTTGTGTGTGGGCGAATATTAGAATTACCCACAT------GTGTGGGCGCAGCTACTTTGTGTCACACGTCCAGCAAGTA
CTACCCAT-CCCTACCTCACGCGTGTGGCACGAAGCAAAT-ATGCCCACACGTCCTGGCGCAGCTACGTTAGGTACCCGC
GGGATGACGATTTAGTTGCCATCCGGGATGGCAAATGTAGCTGTAAAAGCATG--AACTCTCTCTGTTTTGATTAACTAT
AGTTGCCATGTCTAATTTATGGTAGTTGCCGCGTGTAATCAAACCATAGTCGCCGTGTGTGATTAACTACTTGCCATAAA
TGGTCAAAC-AATAGTTGTCATATGTGTTTACCTAGTTGCCACGTATGGTCCAACCATAGTTGTCATGTATGGTTAATCA
CAATTGT------CATGTGTGTTTA-TCTGGTAGTCACGTACGCGCAACTGCAGTTGTCGTCTAGCGACGAATCATAGTT
GCCATATGTGTTTACCTAGTTGCCACGTACGCGC-AACTGCAGTTGCCATCCAACAACGTACCAGTGTCGTGTGGGCGAA
AAGCAGTCCGCCCACACACGCGTGGACTAGGTGGTGGCTGTGTGGGCAGAAACTAGTTC-GCCCACACAGCGCAGCTGGC
AAACCGCGTGCTGCGGGGCGTGTGGGCGAGCTCTCCAACGCCCACACACATGA-TGATGCCCACGTGGCACTCAGATTCT
AACATA-TT-TC----TTTAG-AATTCGTGCAAAACAAAATCAACGTGGATCAAGGCGTGTGGGCGATGTGCAAACATGC
CAGACATGTGGGAGTTATCATTTGGGTTCTATTTACTCTGCATCTTAGTTTTG
>chr5A_1
GGCCATTGGGCGATGATGGCAGCAGGACACCATTGTCAATCACTCCTGGAAGCAGCGTGCTGTACTCCAAGTATGCAGGA
AGCGAGTTCAAGGGTTCGGAAGGCGAGTACATTGTTCTCAGGTCATCCGACGTGATAGCGGTGCTGTCATCATAAGCTTG
-----CCCTGCCCTAC----GTGAACTAGGAATTTTGATATTTAGTCCAAAACCTTGTTTGGTTATTGCTCTTTGCTTGT
GATTGGTGAACTGTGAATTGCTTCTTCGCTCTATCGTGGAAATGCTGCTTGATAGTTT---TAATAAGATGACGGCTTAG
ACTTCAGAAGTGGCTGTGCTCTGCTTCTAAGCGTCT--------TGGTTTGGTGGGCGTCTAAACG-TTGACAGATCGGC
AGGGTCAGCGTTTCTCACGAAGATTGGCCGACTGAAAATAACCCGC-CATGTGAAGAACGCTTGGTAGCTGTAGTAAAAA
AGCATGCTGACATTGCACTTGGCTCGGTTGGTGAACCACTATGCTGGATAATACTACTCG----TCTGCCAGAGTTGGTG
TATCGGTACAGAAGATTTGTCTCTAG------GAGGATATAGTCATACAAAAATGCTATTTGTGCGTTGTTACCTGACCA
GCTCTTTCTTGTCAGCGAGACAGAGACTGGCAAATCGTTAATGCGGCATCTGAAAGACAATGTCCAACTGG---------
---------AACTGATGCCACCCGGAGAGCGAAAGGCAGATCTTAACAAGGACACAAAT--CTCCCCAGTCAATTCTGGC
GACCTAGCTTTTCCGAGCCTGCGGTTCGTGAAGG-AAAAATCAGAGCCCTGTCACGACTTTCGCACTGTCTCTGGGACGT
GAGAAGCTGGCCGGGTCGACGCCGCCGTACCCAGCCACCTGGTCAACCAAAGCCACGGCTGCGTCCTCATCGGCCGCACC
CGCGCGCGACCGAATCAAA--------ACACAATACACTCCCAAGACCCCGTGCCGCTTTCCGCAAAGCACGAGATCCTC
TGGACTGGGGTCGTCCGACACGGTCACATTCGCACCTCCCAACTTAATCACGCCGCGGCGACGCGCGCGTATATAGCCCG
CTCCGCCCGGCGCGCACCCTCCGGCACGGCACGGCACGCACAGGATCGTCTCTGTCTGTCTCCACGGGACCGATGGCGAG
---------------CCACGACGCGCTCTGGGCCAAGCTCTGGGAGCTGGAGCTGCAGCTCGCGGCGTACAAGCTGCTGC
ACGCCGCGCGGCGCGGGGAGGAGGACGACGCGGGCGCGGACGGCGCGCGGGAGCCCGCGGGGGCCGGCGCCTGCCGCCGC
GGCAGGCAGTACGACGCCTACATGCGCCGGCGCGACGCCAGGCGCGTGTCCGTCGCCGCGGCGCACAGGAGCCACCACCA
CCAGCAGCAGCAGAGGCCGAGCGGC------GTCACGCGCGCCGGCGGCAGGCCGAGCCCGCTCACCGTCAAGTGCGCCG
CTCGGGACACGCCGCAAGTGAGGAGGACGGTGCCGTCGGGAGTGTCCATCCCGGCCACCCCGAGGAAGGAGCACGGCGCG
CTGCCACTGCCCAGGAGCAGGACGGTGAGCAGCGGCGCGCCGGAAGCGAGGCCGCAGTCGCACAGAAGGCGGAACAGCGT
CGGCGGGGACTTGTTGGGCGACTGCGCCACGCCGAGGCCGTTCCTCAGGCGCGGCAGCGGGACGGGCGGCGCGATCGGGA
ACCTGCGGTCGCCGAGGGTGCACGACCTCCCCAGCGGCAGCCCGAGCCCGAGGCGGCCGCCGCAGGACCAGTTCGTCCCA
AAGGTGGCGGCCGGGCGCCACCTCCGGTCCGTGTCGGAGCTGCCGCTCCACGCGACGGTGGAGTCACCAAGGTGGGCGGA
GACGCCGCGGCCGGCCCAGTCACGGGCGAGGAAGCAGTGGGGCAGCCTGGAGAGCCCGCCGCCGGTGATCTTCTCGGCTC
CGGCGGCCAACCCGCACATGGACCTGGCCAAGGGGCTCCGGAAGCTGCTGAGCTTCGTGAGGAAGGGCAAGAGCAGCGAG
CACCAGCGTGCCGGCGGTGGACGTGAATCCGGCGACGGGAAGCCCGTGAAGGGGTGGACAGCTTGCTCCGTCCTTGATGG
CCCGTTCGAACGTGCGAGCCTGGAGGGGCACCGGTTCCCCATGACCCGGGCAGTCGGCACCTCCGGATGAGGCGCGTGGG
CTGGCATTGCCATGGCACGCGGCGCCTAATAAAGAGAAACCGTGATGCCATTAGATGCCCTCTGCGTTGCTCGTGGGGTT
GCTTCGTCGACC----GCCATGCTTTTGTAGCTTTGTATTGTGCTCCATGAATGAACTTGTAGATATCCGCTTGTGTGGT
CCGCTTGTTTGAGAGATGTGGCGCGAGAGAAATGCGTATTTAAGGCCCTGTTTGATTTCAATAAGTCACCTGACTTATAA
GTGACTTATAAGTCATGTCTGTTTGGTTGTCACCTGAGCACACCTTCCCACCTTGTTTTTAATTGTAAAGGTGATGGGAC
CCATGCAAAAAAGGATGACTTATAAGTTTTAAGTTAGGGTGGAACAACTTATGACTTATAAGTTGGGTCCGTTTGGCAAA
ATAAGTCACTTTTTACACTTTTCAACTTATAAGTTAGTGACTTATTTGGAACCAAACAGAGCCTAAATCACAAATTTCTC
GCCTATGCAGCGAGTCATCAATCATGTTAAAGCCCGATGAGGGTTTCTAGTTGAAGATGGATCGCAAAACCTGGATG---
-------TAGCGTTTGTGACAGGTCGTCCACGGGTTTGGAGCAAGTTCTTTTTTCCTCCCTTTCGCTTT-----------
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>chr5B_6
-----TTGGGCGATGATGGCAGCAGGACGCCCTTGTCAATCACTCCTGGGAGCAGCGTGCTGTACTCCAAGTATGCGGGA
AGCGAGTTCAAGGGTTCGGAAGGCGAGTACATCGTTCTCAGGTCATCCGACGTGATAGCTGTGCTGTCATCGTAAGGAAA
GCCTGTT-----CTGCTCATGTGAACTAGGAATTTTGATATTTAGTCCAAAACCTTGTTTGGTTATTTCTCTTGCTTTG-
-------GATTGGCGAATTGCTTCTTTGCTCTATCCTGTCATGGTGGAAATGAGTTTTTAATAATAAGATGACGGCTTAT
ATTTCAGAAATGACTGT--TTTGCTTCTAAGCGCCTGGGTTTGGTGGTTTGGTGGGCGTCTTAACA-TTGACAGGT----
------AGCGTTTATCACGAAGATTGACCGTCTGAAAACAACCTACCCATGT-AAGAACACTTGGTAGTTGTAGTCAACG
AGCATGCGGACAT--CATTTGGCTCGGTTGGTGAACGACTATACTGGATAGTACGGAGTACTCCTCTGCTAGAGTTGGTG
TATCTGTACAGAAGATTTGTCT-TAGGAGGGTGAGGGTTTAGTCATACAAAA-TGCTATTTGTGCGTTGTTACCTAACCA
GCTCGCTCTTGTCAGCGGGATAGACTGA--CAAATCGTCTGTGCAGCATCTGAAAGACAATGTCCAACAGAAAGACAATG
TCCAACAGAAACTGATGCCACCCGGAGAGCGAAAGGCAGAGCTTAACAAGGATGCAAAAAATTCCCCAGTCTATTCTGGC
GACCTAGCTTTTCCCAGCCTGCAGTTCCTGAAGGAAAAAATCAGTGCCCTGTCACGACTTTCGCACTGTCTCTGGGACGC
GAGAAGCTGGCCAGGTCGACGCCGCCGTCCCCCGCCACCTGGTCAACCAAAGCCACGGCTGCGTCCTCATCGGCCGCACC
CGCGCGCGACCGAATCAAA--------ACACAAAAC-CTCCGAAGACCCCGTGCCGCTTTCCGCAAAGCACGAGATCCTC
TGGACTGCAGTCGTCCGACACGGTCACATTCGCACCTCCAAACTTAATCACGCCGCGGCGACGTGCGCGTATATAGCCCG
CTCCGCTCGGCGCGC-----CCGGCACGGCACG-----CACAGGATTGTCTCTGTCTGTCTCCACGGGACCGATGGCGGG
CCACGGAGGACACGACCACGACGCGCTCTGGGCCAAGCTCTGGGAGCTGGAGCTGCAGCTCGCGGCGTACAAGCTGCTGC
ACGCCGCGCGGCGCGGGGAGGAGGACGACGCGGGCGCGGACGGCGTGCGGGAGCCCGCGGGGGCCGACGCCTGCCGCCGC
GGCAGGCAGTACGACGCCTACATGCGCCGGCGCGACGCCAGGCGCGTGTCCGTCGCCGCGGTGCACAAGAC---CCAGCA
ACAGAAGCAGCAGAGGCAGAGCGGC------GTCACGCGCGCCGGCGGAAGGCCGAGCCCGCTCACCATCAAGTGCGCTG
CTCGGGACACACCGCAGGTGAGGAGGACGGTGCCGTCGGGAGTGCCCGCTGCGGCCACCCCGAGGAAGGAGCACGGCGCT
CTGCCACTGCCCAGGAGCAGGACGGTGAGCAGCGCCACGCCGGAAGCGAGGCCGCAGTCGCACAGAAGGCGGAACAGCGT
CGGCGGCGGCC---TGGTCGACTGCGCCACGCCGAGGCCGTTCCTCAGGCGCGGTAGCGGGACCGGCGGCGCGATCGGGA
ACCTGCGGTCCCCGAGGGTGCACGACCTTCCCAGCGGCAGCCCGAGCCCGAGGCGGCCGCCGCAGGACCAGTTCGTCCCA
AAGGTGGCGGCCGGGCGCCACCTCCGGTCCGTGTCGGAGCTGCCGCTCCACGCGACGGTGGAGTCCCCGAGGTGGGCGGA
GACGCCGCGGCCGGCCCAGTCACGGGCCAGGAAGCGGTGGGGCAGCCTGGAGAGCCCGCCGCCGGTGATCTTCTCGGCCC
CGGCGGCCAACCCGCACATGGACCTGGCCAAGGGGCTCCGCAAGCTGCTGAGCTTCGTGAGGAAGGGCAAGAGCAGCGAG
CATCGGCGCTCGGACGGCGGACGTGAATCCGGCGACGGGAAGCCCGTGAAGGGGTGGACAGCTTGCTCCGTCCTTGATGG
CCCGTTCGAACGTGCGAGCCTGGAGGAGCACCGGTTCTCCATGACACGGGCAGTCGGCACCTCCGGATGAGGCGTGTGGG
CTGGCATTGGCATGGCACGCGGCGCCTAAT------AAACCGTGATGCCATTAGATGCCCTCTGCGTCCCTCGTGGGGCT
GCTTCATCGACGTACGGCCATGCTTTTGTAGCTTTGCATTGCGCTCCATGAATTAACCTGTAGATATCCGCTTGTGTGGT
CCGGTTGTTTGAGAGATGTGGCGCGAGAGAAACGCGGTCT----------------------------------------
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---------------------------------------------------------------TAAATCACAAATTTCTC
GCCTATGCAGCGAGTCATCAATCAGGTTAAAGCCCGATGAGGGTTTCTAGTTGAAGATGGATAGCAAAATCTGGATGTTC
ACACGATTGGCGTTTGTGACAGGTCGTCCATGGGTTTGGAGCAAGTTCTTTTCTCCTCCTTTTCGCTTT-----------
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>chrUn_2119
TTTAGGGTCCTG--------------------------------------------------------------------
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-----------------------------------------------------------------------------ATA
ACACCCACA-CGTGTGGCATACTAGAC-ATCCGCCCACAGATAGACCATGTGTGGCGTGAGCAGGAGGCAGCCCACACGG
GCTGTGTGTGGGCGAACATTAGAATTGCCCACACCCACACGTGTGGGCGCAGCTACTTCGTGCCACACCCCCAACAAGTA
CTACTCAT-CCTCACCCCGCACGTGTGGCACGAAGCAAAT-ATGCCCACACATCCTGGCGAAGCTACGTTAGGTACCCGC
GGGATGACGATTTAGTTGCCATCCCGGATGGCGGATGTAGTTATCTGGGATGG---ACTCTCTCTGTTTTGGTTAACTAT
AGTTGCTATGTTTAATTTATGATAGTTGCCGCGTGTAATCAAACCATAGTCGCCGTGTGTGATTAACTAATTGCCACATA
TGGTCAAAC-AATAGTTGCCGTGTGTGTTTACCTAGTTGCCACGTGTGGTCCAACCATTGTTGCCATGTATGATTAATCA
CAGTTGC------CATGCCTGTTTACCCTGGTTGCCACGTAAGCGCAACTGCAGTTGCCGTCTAGCAACTAATCATAGTT
GACATGTGTATTTACCTAGTTGCCACGTGCATGCAAACTGCAGTTGCCATCCAACAACGTACGAGTGTTGTGTGGGCGAA
AAGCAGTCCGTCCACACACGCATGGACTAGGTGGTGGCTGTGTGGACAGAAACTAGTTC-GTCCACACAGCGCAGCTGGC
AAAGCGCATGCGGCGGGGCGTGTAGGCGAACTCTGCAACGCCCACACACACGA-TGATGCCCACGTGTCACTCAGATTAT
AACTGATTC-CT----TT-AG-GATTCGTGCAAAACAGAATGAACATGGATCAAGGCGCGTGGGCGATGTGCAAACATAC
CACACGTGTGGGCGTTATCATTT------------------------------
>chr2D_2121
TGG---GTCCTG--------------------------------------------------------------------
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-----------------------------------------------------------------------------ATA
ACGCCTACA-CGTGTGGCACACTAGAC-ATCCGTCCA----TACGCCTTGTGTGGCGTGAGCAGGAGGCAGCTCACACGG
GC--TGTGTGGGCGAACATTAGAATTGCCCACAC------GTGTGGGTGCAACTACTTCGTGCCACACGTCCAACAAATA
CTACTCAT-CTCCACCTCGCGCGTGTGGCAGGAAGCAAAA-ATGCCCACACGTCCTGGCGCAGTTACGTTAGGTACCCGC
GGGATGACGATTTAGTTGCCATCCGGAATGGCGGATGTAGTTGTAAAAGCCTGGCAACTCTATCTGTTTTGGTTAACTAT
AGTTGCCATGTTTAATTTATGGTAGCTGCCGCGTGTAATCAAACCATAGTTTCCGTATGTGATTAACTACTTGCCACATA
TGATCAAAT-AGTAGTTGTCATGTATGTTTACCTAGTTGCCACGTGTGGTCCAACCATAGTTGCCATGTATGATTAATCA
CAGTTGT------CATGTGTGTTTA-TCTGGTTGCCACGTACGCGCAACTGCAGTTGCCGTTTAGCAATGAATCATAGTT
GCCATGTGTGTTTACCTATTTGCCACA-ACGCGT-AACTGCAGTTGCCATCCAACAACGTACGAGTGTCGTGTGGGCGAA
AAGCAA-TCGCCCACACGCGCGTGGACTAGGTGGTGGCTGTGTGGGTGGAAACTAGTTC-ACCCACACAGCGCAACTGGC
AAACCGCGTGCTGCGGGGCGTGTGGGCAAACTCTCCAACGTCCACACAC-------------------------------
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>chr6A_2122
-GG---GTTCTG--------------------------------------------------------------------
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-----------------------------------------------------------------------------ATA
ACACCCACA-CGTGTGGCATACTAGACCATCCGTCCA----CACATCATGTGTCGCGTGAGCAGGAGACAACTCACATGG
GTTGTGTATGGGCGAACATTAGAATTGCTCACAC------ATGTGGGCGCGGTTACTTCGTGCTACACGCTCAATAAGTA
CTACTCAT-CCCCATCTCGCGCGTGTGGCACAAAGCAAAT-CCGCCCGCACGTCCTGACGCAGTTACGTTAGGTACCTGC
GGGATGACGATTTAGTTGCCATCCGGGATGACAAATGTAGTTGTAAAAGCATGGCAACTTTTTCTGTTTTGATTAACTAT
AGTTGCCATGTCTAATTTATGGTAGTTGATGCGTGTAATCAAACCATAGGTGCCGTGTGTGATTAACTACTTGCCACATA
TGATCAAAC-AATAGCTGTCATGTGTGTTTACCTAGTTGCCATGTGTGGTGCAACCATAGTTGCCATGTATGGTTAATCA
TAGTTGT------CATGTGTGTTTA-TCTGGTTGCCACGTATGTGCAACTGCAGTTGCCGTCTAGCAACGAATTATAGTT
GCCGTGTGTGTTTACCTAGTTGTCATGTACGCGC-AACTGCAGTTGACATCCAACAACGTACGAGTGTCATGTGGGCGAA
AAACAGTTCGCCCATACGCGCGTGAAATAGATGGTGCCTGTGTGGGCAGAAACTAGTTC-GCCCACATAACGCAGCTGGC
AAACCGCGTGTTGCGGGGCGTGTGAGCGAACTATCCAACGCCCACACACGTGA-T-ATGCCGACGTGGCACTCAGATTCT
AACAGA-TC-CT----TT-AG-GATTCGTGAAAAACAAAATCAATATGGATCAAGACGTGTGGGCG--------------
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>chr4D_2125
TCCT------TG--------------------------------------------------------------------
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-----------------------------------------------------------------------------ATA
ACGTCCACA-CATGTGGCATACTAGAC-ATCCGTCCA----CACTCCGTGTGTGGCGTGAGCAGGAGGCAGCCCACATGG
GCTGTGTGTGGGCGAACATTAGAATTGCC-------ACACGTATGGGCGCAGCTACTTCGTGTCACACGCCCAACAAGTA
CTACTCATCCCC-ACCCTGTGCGTGTGGCGCGAAGCAAAT-ATGCCCACACGTCCTAGCGCAACTATGTTAGGTACCCGC
GGGATGAAGATTTAGTTGCCATCCGGGATGGCAAATATAGTTGTAAAAGTATGGTAACTCTCTCTGTTTTGGTTAACTAT
AATTGTCATGTCTAATTTATGGTAGTTGCCGCGTGTAATCAAACCATAGTTGCCGTGTGTGATTAACTACTTGCCACATA
TGGTCAAACAA-TATTTGTCATGTGTGTTTACCTAGTTGCCACGTGTGGTCCAACCATAGTTGCCATGTATGGTTAATCA
CAGGTGC------CATGTGTGTTTA-TCTGGTTGCCACGTACGCGTAACTGCAGTTGCCGTCTAGCAATGAATCATAGTT
GCCATGTGTGTTTACCTAGTTGCCACGTACG-GC-AACTGCAGTTGCCAACAAACAATGTACGGGTGTCGTGTGGGCGAA
AAGCAGTTCGCCCACACGCGCGTGGACTAGGTGGTGGTTGTGTGGGCAGAAACTAGTTCCGCCCACAGAGCGCAGCTGGC
AAACCGCGTGCTGCGGGGCGTGTGGGCGAACTCTCCAACGCCCACACACACAA-TGATGCCCACGTGGCACTCAGATTCA
AACAGA-TT-TT----TT-AAAGATTTGTGCAAAACAAAATCAACGTGGATCAAGGCGTGTGGGCTATGTGCAAACATGC
CACACGTGTGGGCGTTATGATTTGGGTT-------------------------
>chr7D_2127
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--------------------------------------------------------------------------CTGATA
ACGCCCACA-CATGTGGCATATTAGAC-ATCCGTCTT----CACACCGTGTGTGGCGTAAGCAGGAGGCAGCCCACACGG
GTCATGTGCGGGCGAACATTAGAACTGCCCACAC------ATGTGGGCGCAGCTGCTTCGTGCCACACGCCCAACAAGTA
CTACTCAT-CCC-ACCCCGCGCGTGTGGCGTGAAGCAAAA-ATGCCCACACATTCTGGCGCAGCTACGTTAGTTACCCGT
GGGATGACGGTTTAGTTGCCATCCGGGATGGCAAATGTAGTTGTAAAAGCATGACAACTCTCTCTGTTTTGGTTAAATAT
ATTTGTCATGTCTAATTTATGGTAGTTGCCGTGTGCAATCAAACCATAGTTGCCGCGTGTGATTAACTACTTGCCACATG
TGCTCAAATAAATAGTTGTCATGTGTGTTTACCTAGTTGCCACGTGTGGTCCAACCATCGTTGTCATGTATGGTTAATTA
TAGTTGC------CATGCGTGTTTA-CCTGGTTACCACTTACGTGCAATTGCAGTTGACATCTACCAATGAATCATAGTT
GCCATGTGTGTTTACCTAGTTGCCGCATACACGC-AACTGCAGTTGTCATCTATCACCGTACGAGCGTCGTGTGGGCGAA
GAGCAGTTCACCCACACGCGCGTGGACTGGTTGGTGATTGTGTGGGCGGGAACTAGTTC-CCCAACACGGCGCAGGTGGC
-AACCGCGCGCTGCGGGTTGTGTGGGCGAGCACTCTAACGCCTGCACAACATGCT-ATGCCTACGTGGCACTTAGATTCA
----GACTC-CT----TT-AG-GATTCGTGAAAAATAGAATCAAGGTGGATGAAGGCGTGTGAGCAATGTGCAAATATGC
TACACGTGTGGACGTTATCATTTG-----------------------------
>chr6D_2129
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----------------------------------------------------------------------------GATA
ACGCTCACA-AGTGTGGCATACTAGAC-ATCCGCCCA----CACACCGTGTGTGGCGTGAGCAGGAGGCAGCCCACTCGG
GCTGTGTA--GGCGAACATTAGAATTGCCCACAC------GTGTGGGCGCAACTACTTCGTGCCACACGCTTAACAAATA
CTACTCGT-CTTCACCCCGCGC-TGTGGCACGAAGCAAAA-ATGCCCACACGTCCTGGCGCAGCTACGTTAGGTACCCGC
AGGATGACGATTTAGTTGTCATCCGGGATGGCAAATGTAGTTGTAAAAGCATGGCAACTCTATCTGTTTTGGTTAACTAT
AGTTGTCATGTCTAATTTATGGTTGTTGCCGCGTGTAATCAAACAATGATTGTCGTGTGTGATTAACTACTTGCCACATA
TGGTCAAACAG-TAGTTGTCATGTGTGTTTACCTAGTTGCCACGTTTGGTCCAACAATAGTTGCCATGTATGGTTAATCA
CAATTGC------CATGTGTGTTTA-TATGGTTGCCACGTATGCACAACTGCAATTGCCGTCTAGCAACGAATCATAGTT
GCCATGTGTGTT-ACCTAGTTGCCACGTACGCGT-AACTGCAGCTGCCATCCAACAACGTACGAGTGTCATGTGGAAGAA
AAGTAGTTCGCCCACACACGTGTGGACTAGGTGGTGGCTGTGTGGGCAGAATTTAGTTC-GCCCACACAGCGCAACTGGC
AAACCGCGTGCTGCGGGGCGTGTGGGCGAACTCTCCAACGCCCACACACAT-----------------------------
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>chr4D_2137
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----CCACA-CGTGTGGCATATTAGAC-ATTCGCCCA----CACACCGTGTGTGGCGTGAGCAGGAGGCAGCCCACACGG
GTTGTGTGTGGGCGAACATTAGAATTGTCCACAC------GTGTGGGCACAGCTACTTTGTGCCACACGCCCAACAAGTA
CTACTCAT-CTCCATCCCGCGCGTGTGGCACGAAGCAAAAAATGTCCACACGTCCTGGCGCAGCTACGTTAGG--CCCGC
GGGATGACGATTTAGTTGCCATCCGGGATGACAAGTGTAGTTGTAAAAGCATGGCAACTCTACCTATTTTGGTTAACTAT
AGTTGCCATGTCTAATTTATGGCAGTTGCCGCGTGTAATCAAACCGTAGTTGTCATGTGTGATTAACTCCTTGCCACATA
TGGTCAAACAG-TAGTTGCCATGTGTGTTTACCTAGTTGCCACGTGTGGTCCGACCATAGTTGCCATGTATGGTTAATCA
CAATTGC------CATGTGTGTTTA-TCTGGTTGCCACGTATGCGCAACTGCAGTTGCCGTCTAGCAATGAATCATATTT
GCCATGTGTGTTTACCTAGTTGTCACGTACGCGT-AACTGCAGTTGCCATCCAACAACGTAGGAGTGTCGTGTGGGCGAA
AAGCAGTTCGCTCACACGCGCATGGACTAGGTGGTGGTTGTGTGGGCAGAAACTAGTTC-GCCCACACAGCGCAGCTGGC
AAACAGCATGGTGCGTGGCGTGCGGGCGAACTCTCCAACACCCACACACCAGC-CCCGTCCTACGTGGCATGCAAATTCT
----GCCTC-AATGTGTC-AA-GATTCGTGCAAACTGCACTGGACGATGATCCACGCGTGTGGGCGAGTTGCAAAACTGC
CACACGTGTGGGCGTTAGTATTT------------------------------
>chr4D_2146
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-------------GTGGCATATTAGAC-ATTCGCCCA----CACACCGTGTGTGGCGTGAGCAGGAGGCAGCCCACACGG
GTTGTGTGTGGGCGAACATTAGAATTGTCCACAC------GAGTGGGCACAGCTACTTCGTGCCACACGCCCAACAAGTA
CTACTCAT-CTCCATCCCGCGCGTGTGGCACGAAGCAAAAAATGTCCACACGTCCTGGCGCAGCTATGTTAGGTACCCGC
GGGATGACGATTTAGTTGCCATCCGGGATGACAAGTGTAGTTGTAAAAGCATGGCAACTCTACCTATTTTGGTTAACTAT
AGTTGCCATTTCTAATTTATGGTAGCTGCCGCGTGTATTCAAACCGTAGTTGACATGTGTGATTAACTCCTTGCCACATA
TGGTCAAACAG-TAGTTGCCATGTGTGTTTACCTAGTTGCCACGTGTGGTCCAACCATAGTTGCCATGTATGGTTAATCA
CAATTGC------CATGTGTGTTTA-TCTGGTTGCCACGTACGCGCAACTGCAGTTGCCGTCTAGCAATGAATCATAGTT
GCCATGTGTGTTTACCTAGTTGTCACGTACGCGT-AACTGCAGTTGCCATCCAACAACGTAGGAGTGTCGTGTGGGCGAA
AAGCAGTTCGCTCACACGCGCATGGACTAGGTGGTGGTTGTGTGGGCAGAAACTAGTTC-GCCCACACAGCGCAGCTGGC
AAACAACATGGTGCGGGGCGTGT-GGCGAACTCTCCAACACCCACACACCAGC-CCCGTCCTACGTGGCATGCAAATTCT
----GCCTC-AATGTGTC-AA-GATTCGTGCAAACTGCACTGGACGATGATCCACGCGTGTGGGCGAGTTGCAAAACTGC
CACACGTGTGGGCGTTAGTATTT------------------------------
>chr5D_2225
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-----------------ATTAGAATTGCCCACAC------GTGTGGGCGCAACTACTTCGTGCCACACGCCCAATAAGTA
CTACTCAT-CCCCACCCCGCGCGTGTGCCACGAAGCAAAT-ATGCCCACACGTCCGGGTGCAGCTATGTTAGGTACCCGC
GGGATGGCAGAT--GTAGTTATTCGGAATGGCAAATGTATCTGTAAAAGCATGGCAACTCTCTCTGTTTTGGTTAACTAT
AGTTGCCATGTCTAATTTATGGTAGTTGCCGCGTGTAATCAAACCATAATTGTCGTGTGTGATTAACTACTTGCCACTTA
TGGTCAAACAA-TAGTTGCCATGTGTGTTTACCTAGTTGTCACGTGTTTTCCAACCATAGTTGCCATGTATGGTTAATCA
CAGTTGT------TATGTGTGTTTA-TCTGGTTGCCACGTACGAGCAACTACAGTTGCCGTCTAGCAACGAATCATAGTT
GTCATGTGTGTTTACCTAGTTGCCACGTAGGCGC-AACTGAAATTGCTATCCAACAATGTATGAGTGTCGTGTGGGTGAA
AAGTAGTTCGCCCACACACGTGTGAACTAGGTGGTGGTTGTGTGGGCAGAAACTAGTTT-GCCCACACAGCGCAGTTGGC
AGGCCGCGTGCTACGGGCCTTGTGGGCGAGCTCTCCAC-GTCCACACACACGA-TGATGCCCACGTGGCGCTCAGATTTT
AACAGA-TTTAT----TT-AG-GATTCGTGCAAAACAAAATTAACGTGGATCAGGGCATGTGG-----------------
-----------------------------------------------------
>chr3D_2473
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-----------------------------------TAGTCAAACCATAGTTGCCATGTGTGATTAACTACTTACCACTTA
TGGTCAAATAA-TAGTTGTCATGTATGTTTACCTAGTTGCCACGTGTGGTCCAACCATAGTTGCCATGTATGGTTAACCA
CAGTTGTCATTGTCATCTGTGTTTA-TCTGGTTGCCACCTACGCGCAACTGCAGTTGCCGTCTAGCAAC-AATCATAATT
GCCATGTGTGTT-TCCTAGTTGCCACGTACGCGC-AACTGCAGTTGCCATCCAACAACGTACGAGTGTCGC---------
-------TCGCCCACACGCGCGTGGACTAGGTGGTGGATGTGTGGGCAGAAACTAGTTC-GCCCACACAGCGCAGCTGAC
AAACCGCGTGCTGCGGGGCGTGTGAGCGAACTCTCCAATGCCCACACACATGA-TGATGCCCACGTGGCACTCAGATTCT
AATAGA-TTTCT----TT-AG-GATTCGTGCAAAACAGAATCAACGTAGATCAAGGCGCGTGGGCGATGTGCAAACATGC
CACACGTGTGGGCGTTATCATTTGG----------------------------
>SNPs
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-----------------------------------------------------------S--------------------
S-------------------------------------------------------------------------------
-----------S-------------------S-----------------------------------------S------
------------------S--------------------------S--------------------S-------------
-------------------------S--S-----------------S---------------------------------
-------S------------------------------------------------------------------------
------------S---------------------------------------------S-SSSS-SS-S-----------
--------------------------------------------------------------------------------
---------------------S----S---------S--------S------------------S---------S-----
-------------------SS-----------------------------------------------------------
--------------------------S-S--S-S-----S-----------SS-S-SS-SS--S----------------
-------------------SSSSSSSS-------SS-----S---S------------------SSSSS-SS-SSSS--S
SSS-------------------------S---------------------------------------------------
--------S----------------------------------------------S------------------------
--------------------------------------------------------------------------------
---------------------------------S------------------------S---------------------
---------------------------------------------------------------SS---------------
S------------------------SSSSSS----------------------------------------S--------
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-----------------------------SS----------S--------------------------------------
---------------------S-----------------------S----------------------------------
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-----------------------------------------------------------------S--------------
-----------------------------------------------------------------S--------------
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--------S-SSSSS-----------------------------------------------------------------
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-----------------------S---------------------------------------------SSSSS------
---------S--S---S--------------------------------S-----S--------S--------S----S-
----------------S---------S------S---------------------------------------S------
----S-------S-----S-------------------------------------------------------------
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----------------------------------------------------------------------------S-S-
----------------------S----------------------S----------------------------------
--------------------------------S-S----------------------S--------S-------------
-----S--------------------------------------------------------S-----------------
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----S------S------S---S---------------------------------------------------------
--S--S------S---------------SSSSSSSSSSSSSSSSSSSSSSSSS
>forward_1036
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--------------------------------------------------------CTTTCCGCCGCCAATTAACC----
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>reverse_2873
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------------------------------------------------------------------------TCCTGATA
ACGCCCACATCG--------------------------------------------------------------------
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