>input_sequence_62596
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---------------ATGAACGACCTTTTCTCGACGAACTCGTTCAAGAAGTATGCGGACGCGAACCCGGAGACGTCGGC
GGCCGACATGGAGGCCGGCGGCATGAACGGGGCGAACCTGGACCAGTTCTTCTCGGACGTGGAGGCTGTGAAGGAGGACC
TAAAGGGCTTCGAGACCCTGCACAAGCGGCTGCAGTCCACCAACGAGGAGACCAAGACGGCGCACGACGCCCGCACCATC
AAGGCCCTCCGCTCCCGCATGGACGGAGACGTCGAGCAGGTGCTCAAGCGCGCCAAGGCCGTCAAGGCCAAGCTCGAGGT
GCTCAAGCGCGACAACGCCAACTCCCGCAAGGCGCCCGACTGGGGCCCCGGGTCCTCTGTCGATCGAACCCGCACCTCTG
TCGTCGCCGGCCTCGGCAAGAAGCTCAAGGATATCATGGACGACTTCCAGGTAATTTGATCCGTCTAAACATGCTTGCAT
TGCGCGCCTCGGGCGTGAATATACGTGCACGAATGACGAGAACCTGTGACCGGCGTTGCCGGTGCATGCTCTATTCCGCG
CAGGGGCTGAGGGCGAAGATGGCGGCGGAGTACAAGGAGACGGTGGCGCGGCGGTACTTCACGGTGACGGGCGAGCACGC
GGAGGAGAGCACGATCGACTCGCTCATCTCGTCCGGGGAGAGCGAGTCGTTCCTGCAGAAGGCGATCCAGGACCAGGGGC
GCGGGCAGGTGATGGACACCATCTCGGAGATCCAGGAGCGGAGCGACGCCGTCAAGGACATCGAGCGCAGCCTCATGGAC
CTGCACCAGGTGTTCCTCGACATGGCGGCGCTCGTCGAGGCGCAGGGGCACCAGATCAACGACATCGAGAGGCACGTCGC
GCACGCCAGCTCCTTCGTGCGCCGGGGCACCGTCGAGCTGGAGCAGGCGCACGAGATCCAGAAGGACACCCGCAAATGGA
TGTGCTTCGCCGTCCTCGGGGGCATCGCGCTCGTCGTCGTCCTCGTCACGCCGGTGCTCATCAACCTCCACATCTTGACG
CTCAGATGA-----------------------------------------------------------------------
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>chr7D_1_TraesCS7D01G354500
GGAGGCTGCTTGAGGGGAGTTGTACGTCCGTCTTGCAGCGGGCAAGACACAAACGCTCATAGGAGTTAGTCGATGCGTGT
GTTTCCTGCTACTGATTCCAACTGTCGCATCGCGAAAGTAGGCATCACCTAATAGTCGCAAGCCCGCATTAGGGTACCAT
CATTCGTCGCGTGCCACCAATTAGGCCGCCATTGTTTGATTACCTTTCCACGCCCTCCATAGTCTGCATTGACATGACAC
ACACATCACATCCGCCATCTGGCATGACGCAGGCAAGCGTTCAACGACGGTGTGTGCAATTCCGTCCATCATCTGATCGT
GGTTGGTTAGTGTTGAGTCTATTTTTTGT--CAATCTTGATTTCTCCCAGTTGTTAGTTGAGAATAGAGGATTATGTTGG
TTCCTTAATTTTGTTTCGATTGATCTATCATAGCATTCAGTCAAATTTGTGCACATATTGCATTGGTTCGCTATAAAACT
TGTGAAGAAGTGCAAGGAAAACAATGTGACTTTATGCATCTAGATTTCTGTATAA-------------------------
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---------------------------AACTAATGGAAATTTGACCGTGTGAGAATTGTGAAACAACTAAAGCAGCGACA
AGTAATATGGATGGGATGGAGTACTTGTCTTTTTAGAAAACAAAATGTAAAATAAAGGAGATTTCAAAATAAAATAAAAG
CGACGCTGACAACAAAGAAGTCACCGGTGGTAAAAATGACTAGACGAAGACCCCGGGAAGACAAGGAGAAGCCGTTCATG
CCATGCTGCCACAAATAGGGAGAGAGAGAGCATCCCTCCTACGGGAGAGGGAGACCTTCCTTTCTTCACAACAC-TTGAT
GATCGATTGCTCGTTTCTTGGACCTACGCCTTCCCGGGAGCGGCAAGCCATTGCCATTCTTCCAAACTCAATCCCCTCCC
AGTGTCCCACGATCCGCCTTGCCGTGCGTACGCTCAGCTGTCGCCGCGTTTTGATCGGCTTTCTGGGCTGCGCACTCCGT
TAATTAGCGTCCAAGATGAACGACCTTTTCTCGACGAACTCGTTCAAGAAGTATGCGGACGCGAACCCGGAGACGTCGGC
GGCCGACATGGAGGCCGGCGGCATGAACGGGGCGAACCTGGACCAGTTCTTCTCGGACGTGGAGGCTGTGAAGGAGGACC
TAAAGGGCTTCGAGACCCTGCACAAGCGGCTGCAGTCCACCAACGAGGAGACCAAGACGGCGCACGACGCCCGCACCATC
AAGGCCCTCCGCTCCCGCATGGACGGAGACGTCGAGCAGGTGCTCAAGCGCGCCAAGGCCGTCAAGGCCAAGCTCGAGGT
GCTCAAGCGCGACAACGCCAACTCCCGCAAGGCGCCCGACTGGGGCCCCGGGTCCTCTGTCGATCGAACCCGCACCTCTG
TCGTCGCCGGCCTCGGCAAGAAGCTCAAGGATATCATGGACGACTTCCAGGTAATTTGATCCGTCTAAACATGCTTGCAT
TGCGCGCCTCGGGCGTGAATATACGTGCACGAATGACGAGAACCTGTGACCGGCGTTGCCGGTGCATGCTCTATTCCGCG
CAGGGGCTGAGGGCGAAGATGGCGGCGGAGTACAAGGAGACGGTGGCGCGGCGGTACTTCACGGTGACGGGCGAGCACGC
GGAGGAGAGCACGATCGACTCGCTCATCTCGTCCGGGGAGAGCGAGTCGTTCCTGCAGAAGGCGATCCAGGACCAGGGGC
GCGGGCAGGTGATGGACACCATCTCGGAGATCCAGGAGCGGAGCGACGCCGTCAAGGACATCGAGCGCAGCCTCATGGAC
CTGCACCAGGTGTTCCTCGACATGGCGGCGCTCGTCGAGGCGCAGGGGCACCAGATCAACGACATCGAGAGGCACGTCGC
GCACGCCAGCTCCTTCGTGCGCCGGGGCACCGTCGAGCTGGAGCAGGCGCACGAGATCCAGAAGGACACCCGCAAATGGA
TGTGCTTCGCCGTCCTCGGGGGCATCGCGCTCGTCGTCGTCCTCGTCACGCCGGTGCTCATCAACCTCCACATCTTGACG
CTCAGATGATTTCCGCCGGACGTCGTCCATGTGAAAACCCTGCCCCCTC-------------------------------
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-------------------------------------------CCCTGCTCCACACTTTTTATCTGTGACTCGTCACACT
GTCAAGGACTTTGTTTTGGTT-TTCGTTTCCAGCGGTGCACTTTATTTTCGTAGATGTAGCCTACAAAACTTTGTACTAC
TTGATTGAGAAAACACAGGGAGGATGTATATTGTAGTGATGTACCAGTTTAATTCTTGATCAAGCTTTTTTCTCAATCGA
GAATACTGTAAATTATGTCTCTCTCTTTTTCTCTTGAAAAATAGATCCAGACGAGCTGCCATGATTTAATTTCTCAAATG
ATAACGTCCACACGTGTAGCATATTTGCACATTGCTCACACGCCTTCATCCACCTTGATTCTATTTTTCACGAATCC-TA
AAG----------GA----GTCTGAATCTAAGTGCCACGTAGGCATAGCATGTTGTGCAGGCGTTAGAGTGCTCGCCCAC
ACAACCCGCAGCGCGCG-GTTGCCA------CCTGCGCCGTGTTGGGG-AACTAGTTCCCGCCCACACAATCACCAACCA
GTCCACGCGCGTGTGGGTGAACTGCTCTTCGCCCACACGACGCTCGTACGGTGATAGATGACAACTGCAGTTGCGTGTAT
GCGGCAACTAGGTAAACACACATGGCAACTATGATTCATTGGTAGATGTCAACTGCAATTGCACGTAAGTGGTAACCAG-
GTAAACACGCATGGCAACTATAATTAACCATACATGACAACGATGGTTGGACCACACGTGGCAACTAGGTAAACACACAT
GACAA--CTATTT-ATTTGAGCACATGTGGCAAGTAGTTAATCACACGCGGCAACTATGGTTTGATTGCACACGGCAACT
ACCATAAATTAGACATGACAAATATATTTAACCAAAACAGAGAGAGTTGTC-ATGCTTTTACAACTACATTTGCCATCCC
GGATGGCAACTAAACCGTCATCCCAC----GGGTAACTAACGTAGCTGCGCCAGAATGTGTGGGCATTTTTGCTTC-
>chr7B_1
GGAGGCTGCTTGAGGGGAGTTGTACATCCGTCTCGTCGCTGGCAAGACACAAACGCTCATAGGAGTTAGCCGATGCATGT
GTTTCCTGCTATTGATTCCAACTGTCGCATCGCGACTGGGCG-----CCTAATAGTCGCAAGCCTGCATCAGGGTACCAT
CACCCGTCGCGTGCCACCAATTAGGCCGCCATTGTTCGATTACCTTTCCACGCCCTCCATAGTCTGCATTGACATGACGC
ACACAGCACATCCGCCATCTGGCATGACGCATGCAAGCGTTCAACGACGGCGTGTGCAATTCCGTCCATCATCTGATCGT
GGTTGGTTAGTGTTGAGTCTATTTTTTTTGCCAATCTTGATTTCTCCCCGTTGTTAGTTGAGAATAGAGGATTATGTTTG
TTCCTTAATTTTGTTTCGATTGATCTATCATAGCATTCAGTCAAATTTGTGCACATATTGCATTGGTTCGCTATAAAACT
TGTGAAGAAGTGCAAGGAAAACATGGTGACTGTATGAATCTAGATTTCTGCATATGAACATTTATATTTATTAGACTCTT
CACCATGCCACCATCCCAATATCTAACATGTATATATTTTTATTTTTATAGGTGTGAAAAATGAAGATCAAGTATGGTGA
TTTGAAAGGGATAGAGCTTCAAAGGCACTGAAGATAAGTTCGACATTAATACCAACAGTCATATCTACTGAAGGTTGAAA
TTCAAGTTCAAGTTTAAAATGTGAGCAACCCTCCTTCTAACAAGTTGTTGTTGGATCCGAGATCAAAAACTTACCACGAG
AGGATGAATCCTTCACACCAAGCTCCGATTAGGGTCCCTTGGTATTCAACAACCCCCCTCCCATAACTCAGGCAAGATGG
CCTACAGTACCTTCGCCGATGGAACATAGATCGTAACTCAACATGTTTCACCTATCCAGTAAAGAAAACTACCTACGACA
TGCACCATGTCCTCAACTAGCGGAACAAACATCCCAATGCACAAAGCGACACTGAATCCACACGACAGTTAATCGAATCC
CGACCACCTTCTCATTCAATTTTTTTTTATGTCGGAGGCCCATGATCCTGACATTATTGAACTATATGCCATGTTTCTAT
CACTGATTAGAAAGCTCTCACATGTAAAACATCAAGGCAAATCATGTGTGTTTATAGACATACTGAACTGACAAAATGAG
AGGCTTCTACAAAATTCCCCGCGCGGGACGAAGAGGAATGACAGGTGAAGGCCATAAAGGATTCAGAAACAGAGGACATA
TCCATCACCGCTCTCGAATACGAGCCGGTTCGAGAGAAACCTGTATAAAAGCAAAGTGGCTTGGACAAAAATATAGGAGT
CATGCTCTGATATGCACGCCCAAATCCAACTAATGGAAATTCGACTGCGTGCGAAATGTAAAACAACTAAAGCAGCGACA
AGTAATATGGATGGAAGGGAGTACTTGCTTTTTAGG-----AAAATATAAAATAAAGGTGATTTCAAAGTAAAATAAAAG
TGACGCTAACAACAAAGAAGTCACCGGTGGTAAAAATGACTAGACGAAGACCCCGGGAAGACAAGGAGAAGCCGTTCATG
CCATGCTGCCACAAATAGGGAGAGAGAGAGCATCCCTCCTACGGGAGAGGGAGACCTTCCTTTCTTCACAACACGTTGAT
GATCGATTGCTCGTTTCTTGGACCTACGCCTTCCCGGGAGCGGCAAGCCATTGCCATTCTTCCAAACTCAATCCCCTCCC
GGTGTCCCACGTTCCGCCTTGCCGTGCGTACGCTCAGCTGCCGCCGCGTTTCGGTCGGCGTTCTTGGTTGCGCACTCCGT
CAATTAGCGTCCAAGATGAACGACCTTTTCTCGACGAACTCGTTCAAGAAGTATGCGGACGCGAACCCGGAGACGTCGTC
GGCCGACATGGAGGCCGGCGGCATGAACGGCGCGAACCTGGACCAGTTCTTCTCGGACGTGGAGGCTGTGAAGGAGGACT
TAAAGGGCTTCGAGACCCTGCACAAGCGGCTGCAGTCCACCAACGAGGAGACCAAGACGGCGCACGACGCCCGCACCATC
AAGGCCCTCCGCTCCCGCATGGACGGCGACGTCGAGCAGGTGCTCAAGCGCGCCAAGGCCGTCAAGGCCAAGCTCGAGGC
GCTCGAGCGCGACAACGCCAACTCCCGCAAGGCGCCCGACTGGGGCCCCGGGTCCTCCGTCGACCGAACCCGCACCTCTG
TCGTCGCCGGCCTCGGCAAGAAGCTCAAGGATATCATGGACGACTTCCAGGTAATTTGATCCGTCTAAACATGCTTGCAT
TGGACGCCTCGGGCGTGAATATATGTGCATGAATGACGAGAACCTGT----GGCGTTGCCGGTGCATGCTCTATTCCGCG
CAGGGGCTGAGGGCGAAGATGGCGGCGGAGTACAAGGAGACGGTGGCGCGGCGGTACTTCACGGTGACGGGCGAGCACGC
GGAGGAGAGCACGATCGACTCGCTCATCTCGTCCGGGGAGAGCGAGTCGTTCCTGCAGAAGGCGATCCAGGACCAGGGGC
GCGGGCAGGTGATGGACACCATCTCGGAGATCCAGGAGCGGCACGACGCTGTCAAGGACATCGAGCGCAGCCTCATGGAC
CTGCACCAGGTGTTCCTTGACATGGCGGCGCTCGTCGAGGCGCAGGGGCACCAGCTCAACGACATCGAGAGCCACGTCGC
GCACGCCAGCTCCTTCGTGCGCCGGGGCACCGTCGAGCTGGAGCAGGCGCACGAGATCCAGAAGGACACCCGCAAATGGA
TGTGCTTCGCCGTCATCGGGGGCATCGCGCTCGTCGTCGTCGTCGTCACGCCGGTGCTCATCAACCTCCACATCTTGACG
CTCAGATGATTTCCACCGGACGTCGTCCATGTGAAAACCCTGCCCCCTC-------------------------------
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-------------------------------------------CCCTGCTCCACACTTTTAATCTGTGACTGATCACACT
GTCAAGGACTTTGTTTTCGTT-TTCGTTTCCAGCGGTGCACTTCATTTTCGTAGATGTAGCCTACAAAACTTTGTACTAC
ATGATTGAGAAAACACAGGGAGGATGTATATTGTAGTGATGTACCAGTTTAATTCTTGATCAAGCTTTTTTTTCAATCGA
GAATACTGTAAATTATGTCTCTCTCTTTTTCTCTTGAAAAATAGATCCAGACGAGCTGGCATGAATTAATTT--------
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>chr7A_660
ATAT----------------------------------------------------------------------------
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-----------------------------------------------------------------------------AAG
TGGCGCTAGCAACAAAGAAGTCACCGGTGGTAAAAATGACTAGACGAAGACCCCGGGAAGACAAGGAGAAGCCGTCCATG
CCATGCTGCCACAAATAGGGAGAGAGAGAGAATCCCTCCTACGGGAGAGGGAGACCTTCCTTTCTTCACAACAC-TTGAT
GATCGATTGCTCGTTTCTTGGACCTACGCCTTCCAGGGAA-GGCAAGCCATTGCCATTCTTCCAAATTCAATCCCCTCCC
AGTGTCCCACGATCCGCCTTGCCGTGCGTGCGCTCAGCTCTCGCCGCGTTTTGATCGGCGTTCTGGGCTGCGCACTCCGT
TAATTAGCGTCCAAGATGAACGACCTTTTCTCGTCGAGCTCGTTCAAGAAGTATGCGGACGCGAACCCGGAGACGTCGGC
GGCCGACATGGAGGCCGGCGGCATGAACGGGGCGAACCTGGACCAGTTCTTCTCGGACGTGGAGGCCGTGAAGGAGGACT
TAAAGGGCTTCGAGACCCTGCACAAGCGGCTGCAGTCCACCAACGAGGAGACCAAGACGGCGCACGACGCCCGCACCATC
AAGGCCCTCCGCTCCCGCATGGACGGCGACGTCGAGCAGGTGCTCAAGCGCGCCAAGGCCGTCAAGGCCAAGCTCGAGGC
GCTCAAGAGCGACAACGCCAACTCCCGCAAGGCGCCCGACTGGGGCCCCGGGTCCTCCGTCGACCGAACCCGCACCTCCG
TCGTCGCCGGCCTCGGCAAGAAGCTCAAGGATATCATGGACGACTTCCAGGTAATTTGATCCGTCCAAACATGCTTGCAT
TGCGCGCCTCGGGCGTGAGTGTACGTGCATGAATGACGAGAACCTGTGGCCGGCGTTGCCGGTGCATGCTCTACTCTGCG
CAGGGGCTGAGGGCGAAGATGGCGGCGGAGTACAAGGAGACGGTGGCGCGGCGGTACTTCACGGTGACGGGCGAGCACGC
GGAGGAGAGCACGATCGACTCGCTCATCTCGTCCGGGGAGAGCGAGTCGTTCCTGCAGAAGGCGATCCAGGACCAGGGGC
GCGGGCAGGTGATGGACACCATCTCGGAGATCCAGGAGCGGAGCGACGCCGTCAAGGACATCGAGCGCAGCCTCATGGAT
CTGCACCAGGTGTTCCAAGACATGGCGGCGCTGGTGGAGGCGCAGGGGCACCAGCTCAACGACATCGAGAGCCACGTCGC
GCACGCCAGCTCCTTCGTGCGCCGGGGCACCGTCGAGCTGGAGCAGGCGCACGAGATCCAGAAGGACACCCGCAAATGGA
TGTGCTTCGCCGTCCTCGGCGGCATCGCGCTCGTCGTCGTCCTCGTCACGCCGGTGCTCATCAACCTCCACATCTTGACG
CTCAGATGATCTCCGCCGGACGTCGCGCGTCCATGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCCCTGCTCCACACTTTT-ATCTGTGACTCGTCATACT
GTCAAGGACTTTGTTTTCCTAATTCGTTTCCAGCGGTGCGCTTTATTTTCGTAGATGTAGAG-----------------C
TTGATTGAGAAAACACAGGGAGGATGTATATTGTAGTGATATACCAGTTTAATTCTTGATCAAGCTTTTTCC-CAATCGG
GAATACTGTAAATTGTGTGTCTCTTCTTCTG--TTGAAAGATAGATCCAGACCGAGTGGCATGAATTAATTT--------
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>chr5B_2338
AATATC--------------------------------------------------------------------------
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--------------------------------------------------------------------------CAAATG
ATAACGCACACATGTATGGCATATTTACACATCGCTCACACGCCTTGATCCACTTTAATTCTGTTTTGCACGAATCC-TA
AAG----------GA----------ATGTGAGTGCCACGTAGGCATAGCGTGTTGTGTGGGCATTAGAGCGCTCACCCAC
ATGACCCACAGCGCGCG-GTTGCCA------GCTG-----TGTGGGCG-AAGCAGTTTCCGCCCACACAGTCACCAACCA
GTCCACGCGCATGTGGGTGAACTGCTCTTCGCCCACACGACGCTCATACGGTGATAGAAGGCAACTGCGGTTGCACGTAT
GCGGCAACTAGGTAAACACACATGGCAACTATGATTCGTTGGTAGATGGCAACTGCAGTTGCGCGTACGTGGCAACCAG-
GTAAAAACACATGGTAACTATGATTAACCATACATGGCAACTATGATTGGACCACACGTGAGAACTAGGTAAACACACAT
TATAACTA-TTT--GTTTGACCACATGTGGCAAGTAGTTAATCACACACGGCAACTATGGTTTGATTGCACGCGGTAACT
GCAATAAATTAGACATGGCAACTATATTTAACCAAAATAGATAGAGTTCTC-GTGCTTTTACAACTACATTTGCCATCCC
AGATGGCAACTAAAGCGTCATCCCAC----GGGTAACTAACGTAGC-------------------------------
>chr3A_2340
TTTC-C--------------------------------------------------------------------------
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--------------------------------------------------------------------------CAAATG
ATAACTTCCACACGTGTGGCATGTTTGCACATCGCCTAAACGCTTTGATCTACGTTGATTCTGTTTTGCACGAATCC-TA
AAG----------GAATCTGTTAGAATCTGAGTGACACGTGGGCATCATC--GTGTGTGGGCGTTGGAAAGTTCGCCCAC
ACGTCCCGCAGCACACG-GTTTGCCAGCTGCGCTG-----TGTTGGCG-AACTAGTTTCTGCCCACACAGCCACCACCTA
GTCCACGCGCGTGTGGGCGAACTGCTTTTCGCCCACATGACACCTGTACGTTGTTGGATGGCAACTGCAATTGCGCCTAC
ATGGCAACTAGGTAAACACACATGGCAACTATGATTCGTTGCTAGACGGTAACTGCAGTTGCGCGTACGTGGCAACTAG-
ATAAACACACGTGGCAACTGTGATTAACCATACATGACAACTATGGTTGGACCACACGTGGCAACTAGGTAAACACACAT
GGCAA--CTATT--GTTTGACCATATGTGGCAAGTAGTTAATCACACACGACAACTATGGTTTGATTACACATGGCAACT
ACCATAAATTAGACATGACAACTATAGTTAACCAAAACAGAGAGAGTTGCC-ATGCTTTTACAACTACATTTGCCATCCC
GGATGGCAACTAAATCGTCATCCCAC----GGGTACCTAATGTAGTCGCCA--------------------------
>chr3D_2342
--TC-C--------------------------------------------------------------------------
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--------------------------------------------------------------------------CAAATG
ATAACGCCCACATGTGTGGCATATTTGCACATCACCCACACGCCTTGATCCACCTTAATTCTGTTTTGCACGGATCC-TA
AAG----------GA----------ATCTGAGTGACACGTAGGCATAGCGTGTTGTGTGGGTGTTAGAGCGCTCGCCGAC
ACGACCCACAGCGCGCG-G-TTGCCAGCTGCGCCG-----TGTGGGCG-AACCAGTTCCTGCCCACACAGTCACCAACCA
GTCCATGTGCGTGTGGGCGAACTGTTTTTCACCCACACGCCGCTCGTACGGTGATAGATGGCAACTGCAGTTGCGCGTAT
ACGGCAACTAGGTAAACACACATGGCAACTATGATTCGTTGGTAGATGGCAACTGCAGTTGCGCGTACGTGGCAACCAA-
GTAAACACACATGGCAACTATGATTAACCATACATGGCAACTATGGCTGGACCACACGTGGCAACTAGGTAAACACACAT
GACAA--CTATTC-GTTTGACCACATCTGGCAATTAGTTAATCACACACGGCAACTATGATTTGATTGCACGCGGCAACT
ACCATAAATTAGACATGACAACTATATTTAATCAAAATAGAGAGAGTTGCC-ATATTTTTACAACTACATTTGCCATCCC
AGATGGCAACTAAAGCGCCATCCCAC----GAGTAAT--ACGTAGTTGCACCAGGACGTGTGGGCAGATTTTGCTTC
>chr3A_2342
--TC-C--------------------------------------------------------------------------
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--------------------------------------------------------------------------CAAATG
ATAACGTCCACACGTGTGACATTTTTTCACATCACTCACATGCCTTGATCCACCTTGATTTTGTTTTGGACGAATCC-TA
AAG----------GA----------ATCTGAGTGTCACGTAGGCATAGCGTGTTGTGTGGGCATTAGAGTGCTCGCCCAC
ACGACTCGCAGTGCGCG-G-TTGCCAGCTGCGTCA-----TGTGGGCG-AACCAGTTCCCGCCCACATAGTCACCAACCA
GCCCACTCGCTTGT-GGTGAACTGCTCTTCGCCCACACGACACTTGTACGATAATAGATGGCAACTGCAGTTGCACGTAC
GTGACAATGAGGTAAATACACATGGCAACTATGATTCGTTGGTAGATGGCAACTGCAGTTGCGCGTATGCGGCAACCAG-
GTAAACACACACGACAACTATGATTAGCCATACATGTCAACTATGGTTGGACCACACGTGGCAGCTAGGTAAACACACAT
GGCAA--CTATTTTGTTTGACCACATGTAGCAAGTAGTTAATCACACACGAAAACTATGGTTTGAATGCACGCGACAACT
ATCATAAATTAGACATGGCAACTATAGCTAACCAAAATAAAGAGAGTTGCC-ATGCTTTTACAACTACATTTGCCATCCG
AGATGGCAACGAAAGCTTCATCCCGT----GGGTAACTAATGTAGCTACGCCAGGACGCGTGGGCATTTTTACTTC-
>chr5D_2345
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--------------------------------------------------------------------------CAAATG
ATAACACCCACACGCGTGGCATATTTACACATCGCCCACACG-CTTGATCCACCTTAATTCTGTTTTGCACGAATCC-TA
AAG----------GA----------ATCCGAGTGCCACGTAGGCATAGCGTGTTGTGTGGGCGTTAGAACACTTACCCAC
ACGACCCGCGGCACGCG-GTTTGCCAGTTGCGCTG-----TGTGGGCG-AACTAGTTCTCGCCCACACAGTCAGCAACCA
GTCCACGCGCGTGTGGGTGGACTGCCCTTCGCCCACACGACACTCGTACGGTGATAGATGGTAACTGCAGTTGCGCGTAT
GCGGCAACTAGGTGAACACACGTGGCAACTATGATTCGTTGGTAGATGGCAACTGTAGTTGCGCGTACGTGACAACCAGG
GTAAACACACATTACAACTATGATTAACCATACATGACAACCATGGTTGGACCACACGTGGCAACTAGGTAAACACACAT
GACAA--CTA-TTTGTTTGACCACATGTGGCAAGTACTTGATCGCACACGGCAACTATGGTTTAATTGCACATTGCAACT
ACCATAAATTAGACATGACAACTATAATTAACCAAAACAGAGAGAGTT--CTATGCTTTTACAATTGCATTTGCCATCCC
GGATGGCGACTAAAGCGTCATCCCGTGAAAGGGTACCTAACGTAGCTGCGCCAGGACGTGTGGGCATTTTTGCTTC-
>chr5D_2345
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--------------------------------------------------------------------------CAAATG
ATAACTCCCACATGTCTGGCATGTTTGCACATCGCCCACACGCCTTGATCCACGTTGATTTTGTTTTGCACGAATTC-TA
AAGAAATATGTTAGA----------ATCTGAGTGCCACGTGGGCATCATCATGTGTGTGGGCGTTGGAGAGCTCGCCCAC
ACGCCCCGCAGCACGCG-GTTTGCCAGCTGCGCTG-----TGTGGGCG-AACTAGTTTCTGCCCACACAGCCACCACCTA
GTCCACGCGTGTGTGGGCGGACTGCTTTTCGCCCACACGACACTGGTACGTTGTTGGATGGCAACTGCAGTTGCGCGTAC
GTGGCAACTAGGTAAACACATATGGCAACTATGATTCGTCGCTAGACGACAACTGCAGTTGCGCGTACGTGACTACCAG-
ATAAACACACATGACAATTGTGATTAACCATACATGACAACTATGGTTGGACCATACGTGGCAACTAGGTAAACACATAT
GACAA--CTATT--GTTTGACCATTTATGGCAAGTAGTTAATCACACACGGCGACTATGGTTTGATTACACGCGGCAACT
ACCATAAATTAGACATGGCAACTATAGTTAATCAAAACAGAGAGAGTT--C-ATGCTTTTACAGCTACATTTGCCATCCC
GGATGGCAACTAAATCGTCATCCCGC----GGGTACCTAACGTAGCTGCGCCAGGACGTGTGGGCATATTTGCTTC-
>chr3B_2345
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--------------------------------------------------------------------------CAAATG
ATAACGTCCACACATGTGGCATTTTTGCACATCGCCCACACGCCTTGATCCACCTTGATTTTGTTTTGCATGAATCCTAA
AG-----------GA----------ATCTGAGTGCCACATAGGCATAGCATGTTGTGTGGGTGTTAGAGCGCTCACCCAC
ACGACCCGCAGTGCGTGAG-TTGCCAGCTGCGACG-----TGTGAGCG-AACTAGTTCCCGCCCACACAGTCACCAACCA
GTCCACTCGCGTGTGGGTGAACTGCTCTTCGCCCACATGACACTCGTACGGTGATAGATGGCAACTGCAGTTGCGCATAC
GCGGCAACTAGGTAAACACACATGGCAACTATGATTCGTTGGTAGATGGCTATTACAGTTGCGAGTACGTGGCAACCAG-
GTAAACACACACAACAACTATGATTTACCATACATGGCAACTATGGTTGGACCACACGTGGCAATTAGGTAAACACACAT
GGCAACTATTTT--GTTTGACAACATGTGGCAAGTAGTTAATCACACACAACAACTATGGTTTGATTACACGCGACAACT
ATCATAAATTAGACATGGCAACTATAGTTAACCAAAACAGAGAGAGTTGCC-ATGTTTTTATAACTACATTTGCCATCCC
--ATGGCAACTAAAGTGTCATCCCGC----GGGTAACTAATGTAGCTACGCCAGGGCATGTGGACATTTTTGCTTC-
>chr4D_2345
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------CAAATC
ATAACGCCCACACGTGTGGCATGTTTGCACATAGCCCACACGCCTTGATCCACGTTGATTTTGTTTTGCACAAATCT-TT
AAAAAATCTGTTTGA----------ATCTGAGTGCCACGTGGGCATCATTGTGTGTGTGGGCGTTGGAGAGTTCGCCCAC
ACGCCCCGCAGCACGCG-GTTTGCCAGCTGCGCTC-----TGTGGGCGGAACTAGTTTCTGCCCACACAACCACCACCTA
GTCCACGCGCGTGTGGGCGAACTGCTTTTCGCCCACACGACACCCGTACATTGTTTGTTGGCAACTGCAGTTGC-CGTAC
GTGGCAACTAGGTAAACACACATGGCAACTATGATTCATTGCTAGACGGCAACTGCAGTTACGCGTACGTGGCAACCAG-
ATAAACACACATGGCACCTGTGATTAACCATACATGGCAACTATGGTTGGACCACACGTGGCAACTAGGTAAACACACAT
GACAA--ATATT--GTTTGACCATATGTGGCAAGTAGTTAATCACACACGGCAACTATGGTTTGATTACACGCGGCAACT
ACCATAAATTAGACATGACAATTATAGTTAACCAAAACAGAGAGAGTTACC-ATACTTTTACAACTATATTTGCCATCCC
GGATGGCAACTAAATCTTCATCCCGC----GGGTACCTAACATAGTTGCGCTAGGACGTGTGGGCATATTTGCTTC-
>chr3D_2346
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---------------------------------------------------------------------------AAATG
ATAATGCCCACACGTGTGGCATATTTACACATCGCCCTCACGCCTTGATCCATCTTAATTCTGTTTTGCACGAATCC-AA
AA-----------GA----------ATCTGAGTGCCACGTAGGCATAGCGTGTTGTGTGTGCGTTAGAGCGCTCGCCCAC
ACGATCCGCAGCGCGCG-GTTTGCCAGCTGCGCCG-----TGTGGGCG-AACCAGTTGCCGCCCACACAGTCACCAACCA
GTCCACGCGGGTGTGGGTAAACTGCT---CGCCCATACGACGCTTGTACGGTGATAGATGGCAACTGCAGTTGCGCGTAT
GCGGAGACTAGGTAAA-ACACATGGCAACTATGATTCGTTGGTAGATGACAACTGCAGTTGCGTGTACGTGGCAACAAG-
GTAAACACACATGGCAACTATGATTAACCATACATGGCAACTATGATTGGACCACACGTGGCAACTACGTAAACACACAT
GCCAACTA-TTT--GTTTGACCACATGTGGCAAGTAGTTAATCACACACGGCAACTATAGTTTAATTGCACGCGGCAACT
ATTATAAATTAAACATGACAACTATAGTTAACCAAAACAGAGAGAGTTGCC-ATACTTTTACAACTACATTTGCCATCCC
GGATGGCAACTAAAGCGTCATCC-AC----AAGTAACTGACGTAGCCGCGCCAGGACGTGTGGGCATTTTT------
>SNPs
-------------------------S-------S-SS--S-----------------------------S------S---
-----------S-----------------------SS-SSS-SSSSS-----------------S----S----------
--SS--------------------------------S-----------------------------------------S-
-----S-------------------------S------------------S-----------------------------
---------------------------S--------------------S-----------------------------S-
--------------------------------------------------------------------------------
-----------------------SS------S----S-------------S---S-------------------------
--------------------------------------------------------------------------------
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-----------------------------------------S---S-S---S---S---S--------------------
--------------S-S----------SS----SS-SSSSS-----S-----------S---------S-----------
S------S------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------------S--------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------------------------S
--------------------------------------------------------------------------------
--------------------------S----------------------------------------------------S
---------------------------------------------------------S-----S----------------
--------------------------------------------------------------------------------
-----------------------------S------------------S-------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------S------------------------------------S----------------S--------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------S-------------------
-----------------S--------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------------S-----S-------SS------
-----------------S--------------S-------------S---------------S----S------------
---------------------SS------S---------------------------SS---------------------
--S----------------------------S---SSSSS------S---------------------------------
------------------------------------------------------------S--------------S----
------------------------------------------------S--------S----S----S----S-------
--------S------------S-------------------S--------------------------------------
--------------S-----S--------------------------S--------------------------------
---------------------S----------------------------------------------------------
--------------S---------------------------------------S-S--------------------
>forward_126
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--------------------------GCATCGCGAAAGTAGGCATC----------------------------------
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>reverse_2695
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------------------------------------------------------ATCAACGACATCGAGAGGCA------
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-----------------------------------------------------------------------------
>forward_2350
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----------GGGCGTGAATATACGTGCAC--------------------------------------------------
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>reverse_3637
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------------------------------------GCCGTGTTGGGGAACTAGTT------------------------
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-----------------------------------------------------------------------------
