>input_sequence_62591
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---------------------------------GAGGAGCGGGTGGGGTGGCCGGAGCCGCGGATCGCCGGAGCTCGGAG
GGGGTGCCTGTCGCAGATCTGCCGATCCTGGCGCCCGACATGAGCTCGTCGGTCGAGAAGGTGAGCTGATCCGATCCGGA
GCGTGCTTTTGGCGCTCGATCTACCGCTCTAAAGTATGGATTTGGTGTTGATCTGACGTGTTTTGCCTCGATCTGTTCGC
AGGGGAGCGGATCGCTGGATCCCGGCGAGCGCCCGGCCGCCGGCAGCCAGCCCAAGGCCTGCACCGCCTGCAACACCACC
AAGACGCCGCTCTGGCGCGGCGGGCCCTCCGGACCCATGGTGAGTGCGGCAGATCCCTCCCGATCTGTTGTCTAACCCCT
CTGTTCTTTCCCGATCTGTGATTCTTCGAGCTGATCTACGGCGGCTGATCTGTTTTTTCTCTCTTGCCTCGATCCAGTCG
CTGTGCAACGCGTGCGGGATCCGGTACAGGAAGAAGCGGAGGGAGGCGATGGGCCTCGAGGACCCCCCCAAGAAGAGGCA
GCCGGCGGCGGCCGCCGCGCCT------GCGGCGGCGGCGGTGGCGTGCTCGGAGGCCGGCGGCGAGAGCGCGGATCCGG
AGCAGCAGCAGCAGCCGCCGCAGCAGCAGCCCAAGAAGAAGACGACGACGACCAAGAGGGGTCGCGAGGTGGAGCTCCGC
GTGGTGGGGTTCGGCAAGGAGGTGGTGCTGAAGCAGCGGCGGCGGATGCGGCGCAGGCCGCGGCTGGGCGAGGAGGAGAA
GGCGGCCATCCTCCTGATGGCCCTCTCCTCCGGCGTCATCTACGGCTGATCCAGGCCGACCCAGCCCTACCTAGCTAGC-
AGCAGCAAGCGGAGAGAAGAGAAGA----------GAGATGAGAGGAGATCCAGAGTGTGAGTGATTTGCTCGCTTGCTG
CTGCTTGTCTAGCAAGCAAGCATGCATGCAGGCAGAGATGTCGAGGCGTCTCTGCC----CCCCCTTGTTCTTTCCTGGT
AGTTTTTCCGGCTGATTAGTTCTTCAATAATGAATGAATGAACGATGA--------------------------------
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>chr5B_1_TraesCS5B01G508800
AGCTGAAAAAAATAGTGAAACATGTATAAAAAC-GATTATCATCATTATATCAGTACATAAACACCGTCTCAACATCTCA
AGGGTATTCCAGACATTTTACTCGAAAGCCACAGCTCAGACAACAC-TTTACTAAACGACAATACTGCCCACAACAGCTT
TCTCACATCCCACATCAACTTTCCCACAG------CTCGCCGCCGAACCAAACACCCTCTCAGCCTTGCATTCACT----
----TTGATTACATAGAACCAACTGTCATTGACAAAGTTAGACCGGCTTCCATGTAGGAGTGACAACAACAATGCGCCTC
AAGCGTTAG-----------TGGTCCAGAGACCTTGATGTAATTTTTATTATGTTTATGGTGCTATGTACTTTCGATGCA
CAATCGCAATGT-CTTGATTTTTTTTGAATATTTTATTCTCTTCGTAGACAG--------------ATGACATCACACTA
TAACGTTAACACAGACCAGAAAGAAAGAAAGAAAGAAAGAAAGAAAAACACGCTCACGTGCACCATCATCATCCATCCAT
GT----GTTCTAAAACCTTCCCAAATCCTCCTAGACGGCCGGCCGGCCGAAAAGCCCCAG--------------------
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-----------------------CAG------------------------------------------------------
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--------------------------ACCAACCGCTCGACAAAGCACGCCGGCGGCGTGGCGTGGCGCCGATACATATAC
GGCCA---------------------------------------------------------------------------
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---------------------------------------------------------CCCCCCGGATTCCAGCCCCCATC
TC-----CATTTCCCTCCACCCTTTTCCGTTTCCCTCCACGGCGCGCCCCTCTTCCCT-CCCCATTTTCAGATCCAAAAT
CCAAATCTCCGCCCTTTATCTCTCCTCCCCCCTCCCTTCCCT--------------------------------------
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---CCGACCCA-CCACCACCTCATCCATTCCCCTCCTCCCTCCATCCCTCCC---------CCTTCCCGCCGCCGCCAAC
TCCTCCTCCAAACCCCTGCCGTTGGCCACCGATCGATCGAGCCAGTGCTCCGC---------------------------
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-----------------------------------------------------------------TCTGCTCTGGTGGTT
GGCAGTAGGA------------TCCTCCCGGTAGCAGTGATCTGTGGCGGCGGAGCGGATCG----GGCACCAAACCCCT
AAA-------CCCCCGATCCCCCGATCCGCGACGAGGAGCGGGTGGGGTGGCCGGAGCCGCGGATCGCCGGAGCTCGGAG
GGGGTGCCTGTCGCAGATCTGCCGATCCTGGCGCCCGACATGAGCTCGTCGGTCGAGAAGGTGAGCTGATCCGATCCGGA
GCGTGCTTTTGGCGCTCGATCTACCGCTCTAAAGTATGGATTTGGTGTTGATCTGACGTGTTTTGCCTCGATCTGTTCGC
AGGGGAGCGGATCGCTGGATCCCGGCGAGCGCCCGGCCGCCGGCAGCCAGCCCAAGGCCTGCACCGCCTGCAACACCACC
AAGACGCCGCTCTGGCGCGGCGGGCCCTCCGGACCCATGGTGAGTGCGGCAGATCCCTCCCGATCTGTTGTCTAACCCCT
CTGTTCTTTCCCGATCTGTGATTCTTCGAGCTGATCTACGGCGGCTGATCTGTTTTTTCTCTCTTGCCTCGATCCAGTCG
CTGTGCAACGCGTGCGGGATCCGGTACAGGAAGAAGCGGAGGGAGGCGATGGGCCTCGAGGACCCCCCCAAGAAGAGGCA
GCCGGCGGCGGCCGCCGCGCCT------GCGGCGGCGGCGGTGGCGTGCTCGGAGGCCGGCGGCGAGAGCGCGGATCCGG
AGCAGCAGCAGCAGCCGCCGCAGCAGCAGCCCAAGAAGAAGACGACGACGACCAAGAGGGGTCGCGAGGTGGAGCTCCGC
GTGGTGGGGTTCGGCAAGGAGGTGGTGCTGAAGCAGCGGCGGCGGATGCGGCGCAGGCCGCGGCTGGGCGAGGAGGAGAA
GGCGGCCATCCTCCTGATGGCCCTCTCCTCCGGCGTCATCTACGGCTGATCCAGGCCGACCCAGCCCTACCTAGCTAGC-
AGCAGCAAGCGGAGAGAAGAGAAGA----------GAGATGAGAGGAGATCCAGAGTGTGAGTGATTTGCTCGCTTGCTG
CTGCTTGTCTAGCAAGCAAGCATGCATGCAGGCAGAGATGTCGAGGCGTCTCTGCC----CCCCCTTGTTCTTTCCTGGT
AGTTTTTCCGGCTGATTAGTTCTTCAATAATGAATGAATGAACGATGATGCA------GCTGCAGC---AGCTGCTGTTC
TTCGCGCCAGCTT-AGCC---TTGTTCTTTCTTCTTGCCTAGTAGCAGCTGTGATGTTACCCAAGTAGTAGTAGCAG---
-TATCCTAGTAGTAGTAGCAGCAGTAGTAGTGTGTAACATTGCAGTGTAAGAATTGAGAGAGCTTTATGAATGATGAACC
ATCTTTGTGGCTCCAGATCTGTGCAATCTTGTCCCCTTTTCAGCTGAAATCTATCCCAGCTGATCTGCCTTGTTGAGCTG
ATGTGATGAATCTGAATCTTTGTGGCTCCAGATCTGTGCAAGCAC--TCTCCTTTTCACCTGAAAGGGTGCTTCATACCA
GCTCCAGATCTGTGCAAGCGCCCGCCTTTTCTCTTCCCCGTGGGAGGAATCCCAGCTGAAATTCATCCCAGGTGATCGCC
T-----TTGATGGATGTTTGATCTGATGTGATGGTGCACGAGCGGTGTTTCTGCCCGGGATCTGTTGTCGGCGGCCGCCC
CAGATGAGTAGCATTCCATTCCGTTCCGGTGATAG---TATTTTCCGGGTGGAAAAGCAAGCAGTGAGGTCGCCGTCCAT
GGTGGTTTCTCGAAAGGGAAAAGTCAGCACCCGGTCCTCTTTCTACACCCTCTGCTGCTGCACTCCACTGCACTGCTGAT
GCCTGTCACCAGCTAGCAGCTCGCTCGCTTGCTCACTCACTGACACTGGTAGGAGTGGGGTGGGGCGGAGGAATCC-AAC
CCTATCTACTGGAGTAGTA---TCCCGATCTGTGACCTAGCGGGCCGCGGGGT--------GGGGGTGAAAGGCGGCATG
GAATTTGCTTGTTCGGGATGGTGCAGAGCCCACGGGAATCCCGTGATGGCTCCCCTGCGTGCATCCCTCATCTTGCCCGC
GCCGGAGCAGAAGTTGGTGCTACGATGGATCGTGGATGGATAATAATGTGACGGGTCTGGCTGCTGTGCTGTGGGCATCT
TGTGATCCTGGCTGGTGGTTTGTTCCGTTTTGTTTGCGTCGTGCTCT
>chr4A_6
AAAAAA----ATCAGTGAAACATGTCTAAAAGCAGATTATTATCATTATTCTAGTACATAAACACCATGTCAACATCACA
AGGGTATTCAAGACATTTTGCTTGAAAGCCACGACTCACACACACAGTTTACCACACGACAATACTGCTCACATCAGCTT
TCCCACAACTCACAACCCAACC----------------------------AACACCCTCGTAGCATTGCATTCACTATAA
CTTGTTGAATACATAGACCCAGCTCTCATTGACAAGGTTAGACCGGCTTCGGAATAGGAGTGACAACAACCATGCGCTGC
TGGCGACACTGGTCGTTCGTTGGCCCAGAGACCTCAATGTAATTTTTATCATGTTTATATGGCACTCTACTTTTGACACA
CCATCTAAACAAGCATGGATTATTTTGAATCTGTTTATTTACGCTCTTTGTACATTAGGCATACAAGTGACATCACACTA
GGCCGTTAACACAAACCAGAAAGAAAAC---------------AAAAACACACACACGCACACCATCATCATCCATCCAT
CCATGCGTTCTAAAACCTTCCCAAATCCTCCTAGACGGCCGGCCGGTCGAAAAGCCCCAGACCAAC--------------
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----------------------------------------------------CGGCATGGCGTGGAGCCGATACATATAC
GACCCCTGAATTCCCC----------------------------------------------------------------
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---------------------------------------------------------------------------CGCCC
-C-----GATTTCCCTCCACCCTTTTCCGTTTCCCTCCACGACAC-CCCCTCTTCCCTCCCCCATTTTCAGATCCGAAAT
CCAAATCTCC-CCCTTTATCTCTC--------------------------------------------------------
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>chr4A_6
AAAAAA----ATTAGTGAAACATGTCTAAAAGCAGATTATTATCATTATTCTAGTACATAAACACCATTTCAACATCTCA
AGGGTATTCAAGACATTTTGCTTGAAAGCCACGACTCACACACGCAGTTTACCACACGACAATACTACTCACATCAGCTT
TCCCACAACTCACAACCCAACC----------------------------AACAC--TCTTAGCCTTGTATTCACTATAA
CTTGTTGAATACATAGACCCAACTGTCATTGACAAGGTTAGACCGACTTCGGAATAGGAGTGACAACAACCATGCGCTGC
TGGCGACACTGGTCGTTCGTTGGCCCAGAGACCTCAAAGTAATTTTTATCATGTTTATATGGCACTCTACTTTTGACACA
CCACCGAAACAAGCATGGATTGTTTTGAATCTGTTTATTTACGCTCTTTGTACATTAGGCATACAAATGACATCACACTA
GGCCGTTAACACAAACCAGAAAGAAAAC---------------AAAAAAACACACACGTAGACCATCATCATCCATCCAT
GT----GTTCTAAAACCTTCCCAAATCCTCCTAGACGGCCGGCCGGCCGAAAAGCCCCAGACCAACCGGCGTGGCATGGC
GTCGATACATATACGACCCCTGGATCCCCCCAGCCCGATTTCCCTCCACGACACCCCCTCTTCCCTCCCCCATTTTCAGA
TCCGAAATCCAAATCTCAACCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTGGCCACCAACCAAGAGGTGTGTTTTGGTGTAGATATGTGGATGG
TGATGTATGAACAATTTAAGTCTTTTGGTATATATGTGCTTAGGATGACGTATGAAGAATTAATGTTATATTTGTAGCTC
TATCGGTTTACTATCTTCGCATTTCAATTACCTGCAACATATGTATAATAGCTCAAAAATTAGTGAAACATGTCTAAAAC
ATATTACTACCATTATATTAGTACACAAACACCATTTCAGCATTTCAACGGCATTCAAGACATTTTACTCAAAAGCCACA
GCTCAGACATGCATTTTACCAAACGACAATTTTGCTCACGGCGGCTTTCCCACAACTCACAACCCACGCCAGCTTTTCCA
CAGCTCACAGCCCAACCAAACACTTTCTTAGCCTTGCATTCACTGTAACTTGTCGAATACATAGACCCAACTATCATTGA
CAAGGTTAGACCGGCTTCGGAATAGGAGTGACAACAACCATGCGCCGCTGGCGACACTGGTTGTTCGGTGGCCCAGAGAC
CTCAA--TGTAATTTTTATCATGTTTAT-ATGGCACTCTATACTTTTGACACACCATCGAAACAAAGCATGGATTGTTTT
GAATTTGTTTATTTATGCCCTTTGTACATTAGGCATACACATGACAT--CACACTAGGCCGTTAACACAAACCAAAAACA
AAACA--AAACACACACACA--TGTACACCATCATCATCCATCCATCCATGTGTTCTAAAACCTTCCCAAATCCTCCTAG
ACGGTCGGCCGGCCGAAAAGCCCCAG------------------------------------------------------
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--------------------------TCCAACCACTCGACAAAGCAAGTTGGCGGCATGGCGTGACGCCGATACATATAC
GACCCCTGAATTCCCCTACCCCAATTTCCCTCCACGGCGCCCCCTCTTCCCTCCTCCGTTTTCAGATCTGAAATCCAAAT
CTCCCCCTTTATCTCTCCTCCCCCTTCCC-TCCGGCCCACCACCCCATCCATTCCCCCTCCCTCCCCCCTCCTCCAAACC
CCTTTCGTTGGCCACCAACCAAGAGGTGTGTTTTGGTGTAGATATGTGGATGGTGATGTATGAACAATTTAAGTCTTTTG
GTATATATGTGCTTAGGATGATGTATGAAGAATTAATGTTATATTTGTAGCTCTATCGGTTTACTATCCTCGCATTTTAA
TTAACTGCAACATATGTATAATAGCTCAAAAATTAGTGAAACATGTCTAAAACATATTACTATCATTATATTAGTACACA
AACACCATTTCAACATTTCAACGGCATTCAAGACATTTTACTCGAAAGCCATAGCTCAGACATGCATTTTACCAAATGAC
AATTCTGCTCACGGCAGCTTCCCCACAGCTCACAACCCACGCCAGCTTTCCCACAACTCACAGCCCAACCAAACACTTTC
TTAGCCCTGCATTCACTGTAACTTGTCGAATACATAGACCCAGCTCTCATTGACAAGGTTAGACCGGCTTCGGAATAGGA
GTGACAACAACCATGCGCCGCTGGTGACACGGGTTGTTCGGTGGCCCAGAGACCTCAATGCAATTTTTATCATGTTTATA
TAGCACTCTATACTTTTGACACACCATCGAAACAAGCATGGATTGTTTTGAATTTGTTTATTTACACTCTTTGTACATTA
GGCATACAAATGACAT----CACACTAGGCTGTAAACACAAACCAAAAAGGAAACA--AAACACACACACATGTACACCA
TCATCAACCATCCGTCCATGTGTTCTAAAACCTTCCCAAATCCTCCTATTTGGTCGGCCGAACGAAAAGCCCCAGTCCAA
C---CACTCGACAAAGCACGTTGGCGGCGTGTCGTGACGCCGATACATATACGACCCCTGAATTCCCCTACCAGAA----
-----------------------------TTTCCCTCCACGGCGC-CCCCTCTTCCCTCCCCCATTTTCAGATCCGAAAT
CCAAATCTCC-CCCTTTATCTCTCCTCCC---------CCTT--------------------------------------
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---CCCTCCGACCCACCACGCCATCCATTCCCCCCTC-------------------------------------------
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>chr4A_7
------AAAAATTAGTGAAACATGTCTAAAA-CATATTACTACCATTATATTAGCACACAGACACCATTTCAACATTTCA
ACGGCATTCAAGACATTTTACTCGAAAGCCACAACTCAGACATGCATTTTACCAAACAACAATTCTGCTCACGGCAGCTT
TCCCACAGCTCACAACCCATGTCGGCTTCCCACACCTCACAGCCCAACCAAACACTTTCTTAGCCTTGCATTCAATGTAA
CTTGTCGAATACATAGACCCAGCTGTCATTGACAAGGTTAGACCGGCTT-------------------------------
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-----------------TGGAATAGGAGTGACAACAACCATGCGCCGCTGGCGACACTGGTTGTTTGGTGGCCCAGAGAC
CTCAA--TATAATTTTTATCATGTTTAT-ATGGCACTCTATACTTTTGACACGCCATCGAAGC-AAGCATGGATTGTTTT
GAATTTGTTTATTTACGCTCTTTGTACATTAGGCATACAGATGACAT--CACACTAGGCAGTTAGCACAAACCAAAAAGA
AAACA--AAACACACACACACATGTACACCATCATCATCCATCCGTCCATGTGTTCTAAAACCTTCCCAAATCCTCCTAG
ACGGTCGGCCGGCCGAAAAGCCCCAGTCCAACTGAAAGATCGTGGATGTCGCCTAGAGGGGGGTGAATAGGCATTTTAAA
ATAATTACGGTTTAGGCTTGAACAAATGCTGAATAAACCTAGCGGTTAATTTGCCAAGCACAAAGCCTAAAACAACTAGG
CTCACCTATGTGCACCGACAACTTATGCTAAGAAAGATAAGCAACTATGTGATAGCAAGATATATGACAAGAAACAATAT
GGCTATCACAAAGTAAAGTGCATAAGTAAAGGGCTCGGGTAAGAGATAACCGAGGCACGAGGAGACGACGATGTATCCCG
AAGTTCACACCCTTGCGGATGCTAATCTCCGTTTGGAGCGGTGTGGAGGCACAATGCTCCCCAAGAAGCCACTAGGGCCA
CCGTAATCTCCTCACGCTCTCGCACAATGCAAGATGCCGTGATTCCACTAAGGGACCCTTGAGGGCGGTCACCGAACCCG
TACAAATGGCAACCCTTGGGGGCGGTCACCGAACCCGTACACTTTGGCAACCCTTGGGGGCGGTCACCGGTACCCGTCAA
ATTGCTCGGGGCGATCTTCACAACCTAATTGGAGACCCCGACGCTTGCCCGGAGCTTTGCACCATAATGATTGAGCTCCG
AACACCAACAACCGTCTAGGGAGCCCAAGCACCCAAGAGGAACAAGCTCAAGGGTACCAAGCGCCCAAGAGTAATAAGCT
TCTCAACTTGTAACTTCCACGTATCACGTGGAGAACTCAAACCGATGCACCAAATGCAATGGCAAGGGCACACGGAGTGC
CCAAGTCCTTCTCTCTCAAATCCCACCGAAGCAACTAATGCTAGGGAGGAAAATGAGAGGAAGAACAAGAAGGAGAACAC
CAAGAACTCCAAGATCTAGATCCAAGGGGTTCCCCTCACATAGAGGAGAAAGTGATTGGTGGAAATGTGGATCTAGATCT
CCTCTCTCTTTTCCCTCAAAAACTAGCAAGAATCCATGGAGGGATTGAGAGTTAGCAAGCTCGAAGAAGGTCAACAATGG
GGAAAGAACACGAGCTCAAAGGATAAGGTTCAATGGGGAAGAAGACCCCCTTTTATAGGAGGGGGAAAATCCAACCGTTA
TGTGCTCAGCCCGCACATGAGCGGTACTACCGCTCCACGAGCGGTACTACCGCTAAGGTGGAAGAAACAGGGAAAAGGAG
CAACAAAACATGAACCTTGGGGCGGTAGTACCGCAGGAGACAGCGGTACTACCGCTGGGTTAAGCGGTACTACCGCTCCC
TTCGGCGGTACTGCCGCACAGAATGAAGGGTAAAGGGAAAGAGGGAACCGGGCGGTACTACCGCGGAGGAAGGGCGGTAC
TGCCGCTAAGGAGCGGTACTGCCGCACTACTGCCGCAGCGAGGTACCACACAATCCGACACAGAAAAAGACCCCTCGAAT
CGACGCGGTAGGGACCTGGTAAGCCAACGGTAGTACTGCTGCGGAGTCACCGCCGGTACTACCGTTGCGGAGCGGTACTG
CCGCTTGTGACTCCTCAGCGATACTACCGCTGGGTACCACGGTACTACCGCTGGGACCCTGACAAAAACCACACTCAAGA
AAATCAGAACTGCCATAACTTCTGCATATGAGCTCCGAATTGAGCAAACTCAAGCTTGTTGAAAACAAGACGACGAGTAG
CATCAAAACAGCGACTGGTTATAGTAAGAAGAGGCAGGGGAGGAATGCCAACAAATAGAGGAGTGAAACCTCCAACCGAG
AAGAACCGGCAAAACCTCCAACATCAAAAACATCATAGAAGAAGCATGCGAACTCCGTTTTCGATGAACTCAAGCTTGTC
ATCAAGATGACCATAAGCTCTAAGACTCACAAAGAGAACCAAACAAGAACCAAGAAAGATGATGCAAGGATGCAATGGTT
TGAGCTCTCTACGAACGATACAATCAAGCTACTCATCGAGAGCCCCCCTTGATAGTACGGCAATCGATCCTATAACCCGG
TCTCCCAACTACCATCATGAGACCGGTAAAATAGAAAACCTATCAAGGGCAAACCTTTGCCTTGCACATGGTCCACTTGA
GCTAGATGATGACGATCTTGACTTCCTCAAGTTGGACCACCTTTCTTGATTGTGTTGGCACGATGAAGACTAGATGATTG
CTCCCCCATAGACCACTATGGGTGAGCCACTTTTCGGCACATCTTCACAAGTCCATTGTCACCACAATGGCCGGCAAGCT
TCAAGCACTTGATCTCTTCGCGATGATCCACTTGAACTTGCACACGACAATCTTGATGACGATCACCACTCGATGTCATC
CTCTCCATGGGTTGAGAGATATCTTCCTCTTGACACAAGCCCATGAACATGTACCTAACCCCACGTAGAACTCTCACATA
GACCATGGGTTAGTACACAAAGCACAATGGACAATGCTTACCAAACCATGGGATCACTTGATCCCTCTCGGTACATCTTC
TATGCTTTGTGAGTTGATCAACTTGATTCACTCTTGACTTAGTCTTGATCAACCTTGAATCTTTCCAACTCTCTTCGTTT
GGATGATGTCTTGAAGGTAAACATGAATGATCACACAATCTTCTTCTTCAAGACATGCTTGCAATAAGCTCAACTCTCAA
ATGACCAATCTTTGGATAATTCCTTGAATAGCACCTTGGTCGACACAAACTTTTCTTGAAACCAACACATGTACTCCAAG
AAAAGCCTATGGACAAAACCTTCAAATATAACTCAAGGCAACCATTAGTCCATAGAGATTGTCATCAATTTCCAAAACCA
AACATGGGGGCACCGCATGTTCTTTCACCAACCACTCGACAAAGCACGTTGGCAGCGTGGCGTGACGCCGATACATATAC
GACCCCTGAATTCCCCTACCCCAATTTCCCTCCACGGCGCCCCCTCTTCCCTTCCCCATTTTCAGATCCGAAATCCAAAT
CTCCCCCTTTATCTCTCCTCCCCCTTCCCATCCGACCCACCACCCCATCCATTCCCCCTCCC-----CCTCCTCCAAACC
CCTTTCTTTGGCCACCAACCAAGAGGTGTGTTTTGGTGTAGATATGTGGATGGTGATGTATGAACAATTTAAGTCTTTTG
GTATATATGTGCTTAGGATGATGTATGAAGAGTTAATGTTATATTTGTAGTTCTATTGGTTTACTATCCTCGCATTTTAA
TTACCTGCAACATATGTATAATAGCTCAAAAATTAGTGGAACATGTCTAAAACAGATTACTAGCATTATATTAGTACACA
GACACCATTTCAACATTTCAAGGGCATTCAAGACATTTTACTTGAAAGCCACAACTCAGACATGCAGTTTACCAAACGAC
AATTCTGCTCACGGCAGCTTTTCCACAGCTCACATCCCACGTCAGCTTTCCCACAGCTCACAGCCCAACCAAACACCCTC
TTAACCTTGCATTCACTGTAACTTGTCGAACACATAGACCCATCCGTCACCGACAAGGTCAGTCCAACTTCGATACAGGA
GTGACAACAACGATGCGCCGCAGCGGCACTAGTCGTTCAGTGATCCAGGT-ACCCCAATGTAACTTCTATCATGTTTATA
TGGCACCCTGTACTTTCGACGCACAATCGCAATAAGCCTTGTTTTTTTTTGAATAT----TTTACTCTCTTGGTACACCA
GTCACACACAGATGACATCACACGCTACACCGTTAACACAAACCACAAAGAAAGAAAGAAGAACACGCTCACGTGCACCA
CCAT----CATCCATCCATGCGCTCTAAAACCTTCCCAAATCTTCCTAGACGGCCGGCCGGCCGAAAAGCCCCAAAGCAG
TCATCACTCGACAAAGCAGGCCGGCGGCGATAC---------ATACATATACGGGCGCCCCCCGAATTCCACCCCCGCCC
-C-----CATTTCCCTCCACCCTTTTCCGTTTCCCTCCACGGCGCGCCCCTCTTCCCTCCCCCATTTTCAGATCCGAAAT
CCAAATCTCCGCCCTTTATCTCTCCTCCC---------CCCT--------------------------------------
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---CCGACCCA-CCACCACCTCATCCATTCCCCTCCTCCCTCC--------CTCCCCTCCCCCTTCCCGCCGCCGCCTCC
CNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTCTGCTCTGGTGGTT
GCCCGTAGGA------------TCCTCCCGGCAGCAGAGATCTGTGGCGGCGGATCGGGCCG----GGCACCAAACCCCT
AAA---------------CCCCCGATCCGCGACGAGGAGCGGGTGCGGTGGCCGGAGCCGCGGATCGCCGGAGCTGAGAG
GGGGCGCCTGTCGCAGATCTGCCGATCCTGGCGCCGGACATGAGCTCCTCGGTCGAGAAGGTGAGCTGATCCGATCCAGA
GCGTGTTTTCCGTGCCCGATCTGTACATGTGAAGCAGGGATTTGGTGGTGATCTGACGTGTTTTGCCTCGATCTGTTGGC
AGGGGAGCGGATCGCTGGATCCCGGCGAGCGCCCGGCCGCCGGCAGCCAGCCCAAGGCATGCACCGCCTGCAACACCACC
AAGACGCCGCTCTGGCGCGGCGGACCCTCCGGCCCCATGGTGAGTGCCGCAGATCCCTCCCGATCTGCTATCTAACCCCT
CTGTTTACCCCCGATCTGTGGTTTCCCGAGCTGATCTACGGCGGCTGATCTGTTTTTCTC--TCTCCCTCGATCCAGTCG
CTGTGCAACGCGTGCGGGATCCGGTACAGGAAGAAGCGGAGGGAGGCGATGGGCCTCGAGGACCCTCCCAAGAAGAGGCA
GCCGGCGGCCGCCGCCGCGCCC------GCGG------------CGTGCTCGGAGGCCGGCGGCGAGAGCGCGGATCCGG
AGCA---GCAGCAGCC------GCAGCAGGCCAAGAAGACGACGACAACGACCAAGAGGGGGCGCGAGGTGGAGCTCCGC
GTGGTGGGGTTCGGCAAGGAGGTGGTGCTGAAGCAGCGGCGGCGGATGCGGCGCAGGCAGCGGCTGGGCGAGGAGGAGAA
GGCGGCCATCCTCCTCATGGCCCAGCAAT---------------------------------------------------
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----------------CAAGCAAGCATGCAGGCAGAGATGTTGCGGCGTCTCTGCCTGCTCCCCCTTGTTCTTTCCTGCT
AGTTTTTCCGGCTGATTAGTTGTTGAATAACGAATGAATGAACGATGATGATGCAGCTGCAGCAGCAGCAGCTGCTGTTC
TTCGCGCCAGCTTTAGCGGCTTTGTTCTTTCTTCTTGCCTAGTAGCAGCTGTGATGTTACC-AAGTAGTAGTAGTAGCGG
TTATCCTAGTAGTAGT---------GGTAGTGTGTAACATCTCAGTGTGAGAATTGAGAGAGCTTTATGAATGATGAACC
ATCTTTGTGGCTCCAGATGTGCGCAATGCTCCCCCTTTTTCACCTGAAATCTATCCCAGCTGATCTGATGTTGATCTTGA
TGTGG-------TGAGTCTTTGCGGCTCCAGATCTGTGCAAGCACACTCTCTTTTCCACCTGAAAGCGGGCTTCATTCCG
GCTCCAGATCTGTGCAAGCGCCCGCCTTTTCTTTTC--------------------------------------------
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>chr5D_178
TTTCCGCACAGT--------------------------------------------------------------------
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------------------------------------TCACATCCCAACCAAACACCCTCTTAGCCTTGCATTCACTGCAA
CTTGTTGAACACATAGACCCAGCTGTCATCGACAAGGTTAGACCGGCTC-------------------------------
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-----------------CGGTATAGGAGTGACAACAACGATGCGCCTCCAGCGGCACTGGTTGTTCAGTGGTCCAGATAG
CTCAATGTATAATTTTTATTATGTTTATTATGGTGCTATGTACTTTCGACGCACAATCGCAATAAGCCTTGATTTTTTTA
AATAT------TTTATTCTGTTCGTACATCAGGCACACAGATGACATCACACACTATACCGTTAACACAAACCACAAAGA
AAGAAAGAAAAACACGCTCA--CGTGCACCACCATC----ATCCATCCATGTGTTGTAAAACCTTCCTAAATCCTCCTCC
TACA-CGGCCAGCCGAAAAGCCCCAG------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------ACCAACCGTAGCGGCTATCACCCCAAAA--------------------------
--------------------------------------------------------------------------------
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-----------------------------------------------------------------------------CAC
TCATCACTCGACAAAGCACGCCGGCGGCGATAC---------ATAC-------------------ATTCCACCCCCGCCC
-CCGTTTCATTTCCCTCCACCCTTTTCCGTTTCCCTCCACGGCCCCCCCCTCTTCCCTCCCCCATTTTCAGATCCAAAAT
CCAAATCTCCGCCCTTTATCTCTCCTCCC---------CNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNCCGACCCA-CCACCACCTCATCCATTCCCCTCCTCCCTCC--------C---------CCTTCCCGCCGCCGCCTCC
TCCTCCTCCAAACCCCTACTCCCGCCGACCAATCGATCGAGCCAGTGCTCCGC---------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------------------TCTG-----GTGGTT
GGCCGTAGTATAGCCCGTGGGTTCCTCACCGTAGCAGAGATCTGTGGCGGCGGAGCGGATCGGGCCGGCACCAAACCCCT
AAACCCACGCCCCCCGATCCCCCGATCCGCGACGAGGAGCGGGTGCGGTGGCCGGACCCGCGGATCGCCGGAGCTCAGAG
GGGGTGCCTGTCGCAGATCTGCCGATCCTGGCGCCGGACATGAGCTCCTCGGTCGAGAAGGTGAGCCGATCCGATCCGGA
GCGTGTTTTCCGTGCCCGATCTGTAGATGCGAGGCAGGGATTTGGTGTTGATCTGACGTGTTTTGCCTCGGTCTGTTCGC
AGGGGAACGGATCGCTGGATCCCGGCGAGCGCCCGGCCGCCGGCAGCCAGCCCAAGGCCTGCACCGCCTGCAACACCACC
AAGACGCCGCTCTGGCGCGGCGGACCCTCCGGACCCATGGTGAGTGCCGCAGATCCCTCCCGATCTGTTGTCTAACCCCT
TTGTTCTTTCCCGATCTGTGATT-------------TACGGCGGCTGATCTGTTTTTTATGGTCTCCCTCGATCCAGTCG
CTGTGCAACGCGTGTGGGATCCGGTACAGGAAGAAGCGGAGGGAGGCGATGGGCCTCGAGGACCCCCCCAAGAAGAGGCA
GCCGGCGGCCGCCGCGCCTGCGGCGGCAGCGG------------CGTGCTCGGAGGCCGGCGGCGAGAGCGCGGATCCGG
AGCA---GCAGCAGCC------TCAGCAGCCCAAGAAGAAGACGACGACGACCAAGAGGGGGCGCGAGGTGGAGCTCCGC
GTTGTCGGGTTTGGCAAGGAGGTGGTGCTGAAGCAGCGGCGGCGGATGCGGCGCAGGCCGCGGCTGGGCGAGGAGGAGAA
GGCGGCCATCCTCCTCATGGCCCTCTCCTCCGGCGTCATCTACGGCTGATCCAGGCCGGCCCAGCCCCACCTAGCTAGCT
AGCAGCAAGCGGAGAGAGGAGAAGAGAAGAGAAGAGAGATGAGAGGAGATCCAGAGTGTGAGTGATTTGCTCGCT---TG
CTGCTTGTCT----AGCAAGCAAGCATGCAGGCAGAGATGTTGCGGCGTCTCTGCCTGCTCCCCCTTGTTCTTTCCTGGT
AGTTTTTCCGGCTGATTAGTTCTTCAATAATGAATGAATGAACGATGATGCA------GCTGCAGCAGCTGCTGCTGTTC
TTCGTGCCAGCTT-AGCGGCTTTGTTCTTTCTTGTTGCCTAGTAGCAGCTGTGATGTTACCCAAGTAGTAGTAGTAGCGG
TTATCCTAGTAGTAGTAT---CAGTGGTAGTGTGTAACATTGCAGTGTAAGAATTGAGAGAGCTTTATGAATGATGAACC
ATCTTTGTGGCTCCAGATCTGTGCAAG-----------------------------------------------------
--------------------------------------------CACTCTCTTTTTCACCTGAAAGCGGGCTTGATAGCA
GCTCCAGATCTGTGCAAGCACCCGCCTTTTCTTCCCTCG-------------CAGCTGAAATTCATCCCAGGTGATCGAT
CTGCCATTGATGGATGTTTGATCTGATGTGATGGTGCACGGGTGGTGTTTCCGCCTGGGATCTGGGGTTGGCGGCCG---
--GATGAGTAGCATTCCATTCCGTTCCGGTGATAGTAGTATTTTCCGGGTGGAAAAGCAAGCAGTGAGGTCGCCGTCCAT
GGTGGTTTCTCGAAAGGGAAAAGTCAGCACCCGGTCTTTCTTT--CACCCTCTGCTGCTCCACTGCACTCCACTGCTG--
--CTGTCACCAGCTTTCAGCCCGCTTGCT----CACTCACTGACACTGGTAGGAGTGGAGTGGGGTGGAGGAATCCAAAC
CCTATCTACTGGAGTAGTAGTATCCCGATGTGTGACCCAGCGGGCCGGCGGGCCGCGGGGAGGGGGTGAAAGGCGGCATG
GAATTTGCTTGTTCGGGAGGGTGC--------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------
>SNPs
-SSSS------S-------------S-----S--------S----------S--------------S-S-----------
---------S-----------------------S--------SSSS------S---------------S----S------
--S----S-S----S-SSS-S--SSSSSS---------S-S---S---------------S-------------------
--------S--------S-----------------S--------------SSSS----------------S------SS-
SS---SS-S--------------S----------SS-------------S--------SSS--SS-S------S--SS--
-S----S--SSS--S--SS--S--------S-S--SS-S-SSS-SSSSSSSS----------------------------
SSS----------S------------SSSSSSSSSSSSSSSSS--------S-S-----S--------------------
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-S--S---------------------------------------------------------------------------
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----------------------------------------------------------------S------S----SSS-
S-------------------------------------------------------------------------------
-----------------------------SSSSSSSSS------------------------------------------
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--------------------------------------------------------------------------------
-------------------------------------------SSSSSSSS--------------------------SS-
-----------------S-SSSS-S-S---S-------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
---S---------------------------------S------------------------------------------
---------------------------------------------S------------------------------S---
-----------------------------------S-----------S--------------------------------
-----S---SS-S--S------SSS-S-S-S---S-S-------------------------------------------
--------------------------------------------------------------------------------
-----------------------S-----------------------S--------------------------------
-----------------------SSS--------------------------------S-SSSS-S--------------
--------------------------------------------------------------------------------
---------S-----------S----------SSSSSSSSSSSS------------------------------------
----SSS---------SSSSSS---------------------------------------S------------------
--------------------------------------------------------------------------------
---------------S------------------------------------------S--------S------------
-----------------S---------------------------------------------------------SSS--
----------SSSS--------S------------------S-S------------------------------------
--------------------------------------------------------------------------------
-----------------S--------------------------------------------------------S-----
-----------------SSSS----S------------------------------------------------------
---------------------------SS-SS---S------S------------------------SSS-SSSSSSSSS
SSSS-SSSSSSS---S------S----------------------------S--------------S-S-----------
--------------------------------S---S-SSSSSSSSSSSSSS--------------------------SS
S---------------------------------------S-S--------S---S--------SS--S--------SSS
SS------------------------------------------------------------------------------
------------------------------------S-SS--SSS--------------S----S----S--------SS
SS------------SS----S----S---SSSS-------------------------S------S--------------
-----------------------------S-------S---------SS---S---------------------------
------------------S-----SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
>forward_318
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----------------------------------------------------------AGTGACAACAACAATGCGCC--
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>reverse_7579
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----------------------------------------------------------ACCCAGCCCTACCTAGCTAG--
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>forward_319
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-----------------------------------------------------------GTGACAACAACAATGCGCCT-
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>reverse_7703
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----------------------TGCATGCAGGCAGAGATGTC--------------------------------------
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>forward_6286
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--------------------------ATTCCCCTCCTCCCTCCATC----------------------------------
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>reverse_8103
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----------------------TGGCTCCAGATCTGTGCAAG--------------------------------------
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-----------------------------------------------
