>input_sequence_62573
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---------------------------------------------------------ATGGCGCCCGCCGCCGGCGCGAC
CCGGGCCGTGGTCCTCCGCCTCGACGACCTGTCCCTCCCGCCGCGGTAC-------------------------------
--------------------------------------------------------------------------------
CTCACCGCCGCGTCCCACCTCCCCGTGTCCGACCTCCTCAGCTTCCTCCCCCTCCCCTCCTCCTCCTTCTACCTCACCAC
CGACGGCCGCCCGCTCGCGCCCTCCGCGCCCGTCGCCTCCCTCGCGCCGTCCGGCTCCCTCGCGCTCCGCCTCCGCGCGC
TCCGCGGCGGGGGCGGCGATGGCGGGTCCACCTGCGCCGAGTCCCGCGACTGCTACCTCTCCATGTACCTCGCGAAGAAG
CCCGACAAGGCCGACCCCAACGAGGCCCGCCTCTCCCGCTTCACCTGCTGCGCGCTCTCGGGGGAGCCCCTCGCCGCGCC
CGCCGTCGTGGATCGCCTCGGCAACCTGTTCAACAAGGAGGCCCTCGTCGAGGCGCTCATCCACAAGCGCCTGCCCAAGG
CGCTCTCGCACATCCGCGGGCTCAAGGACATGATCCCCATCCACCTGCACCCCAAGCCCAACGCGGCGGACCAGGAGGTC
CGTTTCCAGTGCCCGGTCACCGGGTTCGAGTTCAACGGCAAGTCCCAGTTCCTCGCGCTCCGTGGATGCGGCCATGTGCT
GAGCGTGAAGGCTCTCAAGGAGGTGAAGTCTTCCTCGTGTTTGGTCTGCCATAAGGAGTTTGATGAGACGGACAAGATGC
CCATCAATGGTACCGAGGAGGAGGTGGAAGTGTTGAGGCAGAGGATGGAGGAGGAGAGAGGGAAGCTGAAGGAGAAGAAG
GATAAGAAGCTGGCGAATGGGCTCAGTGGGAGTAAGCATGCTGCTGCTGCTGCGGTTGCAGACGCTGAGAAGTTGGAGAG
TGGGAAGAAAGGGGAGGCTGCCCCAGCAAAGCGGTTTAAGGCTGCAGATCATGCACCGGCTCATGCAAACAAGAAAGTGT
ATGCGTCAATTTTCACTTCTTCCAATAAGTCTGATTTCAGGGAGACATACTCATGCCGGTCACTCCCCCTAGGAAGGAAT
TAA-----------------------------------------------------------------------------
--------------------------------------------------------------------------------
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---------------------------------------------------
>chr7D_1_TraesCS7D01G149300
ATGACATTTTTTTGTTGGGAAACATAGTAGGAAAAAACATCCTATGAATAAATTCCAAGGATCATTCGAAATACAAAATT
AACATTTTTTAATACAAGGTCAACATTTTTGTCTATACATATTTAACATTTTTAAATGCTTGATTTACATTTTTGCAAAT
GCAAGATTAGCATATTTTGAATACACGGTGAATACTTTTTCTATACACATTCATCGTTTCTCAAATGCTTGATTATCATT
TTTCAAATAGTTATTTAATATTTTTTCAAATGGTTGAATAACATTTTTTAAATACATGATCAAATATTTTCACACACACT
GTATATTTTTTCGTATAGGTGAGAAATATTTTCGCTATACATATTTAACATTTTTTCAAACGTTGGTTAATTTTTTTAAA
AAATATTTTTATGTAAAATATTTTTTAATATATTTTATACAGATTATTTGGAAGTATAAACAAAATTAAAAACAAGGAAA
GCAAAAAAAGAAAATAATGAGGCTGTGGCCTTCAACGCACCTAGGCCGGCCCATCTTGCTCTGCCCTTGCCGCGAGGCTT
CCCTACGTCTCGCTGTGAGCGAGACATACGGGCGTCCGCGGCGGAACCGGATCCTCTTTATAGCAGGTAGCTAGATAATG
GGCTGGCCCAACCCAGACTCAGCTCGATCGGGCCATCACTAAGGCAGTAAGCGAAAAAAAAACCTGAGCCGTCCGGCTCA
AAAGAAAAAGTCAACTTAGCCGGCCCGAGTCGAGCTCAGTCCAAAACTCCCAACCCAAGGCCTCAGACAAACCGAGCCCA
CCCCGCGTGCCGA----ACCTCACCGTCGGTACAGACGTCAGAGTTGACGTCTCTCGATTCCCCTCCGCGTCCAGCTTTC
C-ATAGGAGCCAGCCGCA-----CCGCACCGCACCGAATCATCCCGATCCCCC--ATCGTCTCCGCTAGCCA-----CCC
CCGCTCCCGAATCCGGCGCACCATCGTCGAAACCCTAACCCTAGCTCCGCACCAGCCATGGCGCCCGCCGCCGGCGCGAC
CCGGGCCGTGGTCCTCCGCCTCGACGACCTGTCCCTCCCGCCGCGGTAC-------------------------------
--------------------------------------------------------------------------------
CTCACCGCCGCGTCCCACCTCCCCGTGTCCGACCTCCTCAGCTTCCTCCCCCTCCCCTCCTCCTCCTTCTACCTCACCAC
CGACGGCCGCCCGCTCGCGCCCTCCGCGCCCGTCGCCTCCCTCGCGCCGTCCGGCTCCCTCGCGCTCCGCCTCCGCGCGC
TCCGCGGCGGGGGCGGCGATGGCGGGTCCACCTGCGCCGAGTCCCGCGACTGCTACCTCTCCATGTACCTCGCGAAGAAG
CCCGACAAGGCCGACCCCAACGAGGCCCGCCTCTCCCGCTTCACCTGCTGCGCGCTCTCGGGGGAGCCCCTCGCCGCGCC
CGCCGTCGTGGATCGCCTCGGCAACCTGTTCAACAAGGAGGCCCTCGTCGAGGCGCTCATCCACAAGCGCCTGCCCAAGG
CGCTCTCGCACATCCGCGGGCTCAAGGACATGATCCCCATCCACCTGCACCCCAAGCCCAACGCGGCGGACCAGGAGGTC
CGTTTCCAGTGCCCGGTCACCGGGTTCGAGTTCAACGGCAAGTCCCAGTTCCTCGCGCTCCGTGGATGCGGCCATGTGCT
GAGCGTGAAGGCTCTCAAGGAGGTGAAGTCTTCCTCGTGTTTGGTCTGCCATAAGGAGTTTGATGAGACGGACAAGATGC
CCATCAATGGTACCGAGGAGGAGGTGGAAGTGTTGAGGCAGAGGATGGAGGAGGAGAGAGGGAAGCTGAAGGAGAAGAAG
GATAAGAAGCTGGCGAATGGGCTCAGTGGGAGTAAGCATGCTGCTGCTGCTGCGGTTGCAGACGCTGAGAAGTTGGAGAG
TGGGAAGAAAGGGGAGGCTGCCCCAGCAAAGCGGTTTAAGGCTGCAGATCATGCACCGGCTCATGCAAACAAGAAAGTGT
ATGCGTCAATTTTCACTTCTTCCAATAAGTCTGATTTCAGGGAGACATACTCATGCCGGTCACTCCCCCTAGGAAGGAAT
TAAATCGATGTTGGGGAGATTCCAATGGAT--------AACCTCTTGTACTGATTCAGCGATTAGCTTCATACCATGGCT
CGCCCATAAGTTCTGGTATTTTTGTTTTAGCTGTTGGTGTTATCTATGCTTGATTGCTGTGTGGAGCTTTCTAGTTTTCA
CTCGCAGAGAAGCAATATGTTTTTATAAACGATTTGTGAAATATGTAATGGCTGTAACACATATCATTGAGTCCAGTCTT
CTCTAGCAATTTGTCTGAGTAATGCTGTGGTTTTCATTCAGAGATAAGCAATATGTTTTTATGAATGCTTTGTGAAATAT
GTAATGGTTGAAACAGTTGGAGCTTATCATTGGGTCCAGTCTTCTCTAGCAGTTTGTCTGAGTAATGCTGTAATTCATTC
ACTTTGTTTCAAATTACTTCAAATTTTAGGTCTCATCAGGACAAGCCTTTGATCAACAATTACTGTATTAGTATGTACTT
AATGTGACATAAAGTCGATGCCATTATATTCATATTTCAAAGTACTTCTTTAATTGCTGTTCAAAGGCTTATCCTAACAA
GACCGAATATACGAGGTAATTTGAAGCGGAGGGGGTACTAATTTATGTACATGCCTAAGGGGACTCCCAAGTTAAATCAA
AGGGTTCCTAGTGTTCATTGCTGCAACTTCCACTGTATCTCGACTATGCAATCGTACATACAACTTGTTTGAATAATCTT
GGCTATGCAATCCTACATAGAACCTGTTTGAATAAGGCTGTGATTTATACACATGCGCAAGTGGACTTTCAAGATAAATC
AAATGGTTTCTATGGTTTTCAATGTTGTAATCTCGACTGTGCCACTTTACTGAACAGATAAATTTGCATTGCGCTTGTTT
TGATGTTTAGTTGTCCATGAAGCACGGAATGCGCGCAAAGACAGTGCACGGTAGAACATTTGGCGGCCACATTAATATTA
GCATGACACTGGCAGTATGCTGTAGTTGCTCTTTGCATGCTTCTTTAGGTA
>chr7B_729
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--------AGTCAACTTAGCCGGCCCGAGTCGAGCTCAGTCCAAAACTCCGAACCCAAGGCCCCAGACAAACCGAGCCCA
CTCCGCGTGCCGAACGGACCTCACCGTCGGTACAGACGTCAGAGTTGACGTCTCTCGATCCCCCTCCGCGTCCAGCTTTC
CCATAGGAGCCAGCCGCA-----CCGCACCGAACCATCCCGAT-------CCC--ATCGCCTCAGTTAGCCA-----CCC
CCGCTCCCAAATCCGGCGCACCATCGTTGAAACCCTAGCCCTAGCTCCGCACCAGCCATGGCGCCCGCCACCGGCGCGAC
CCGGGCCGTGGTCCTCCGCCTCGACGACCTGTCCCTCCCGCCGCGGTAC-------------------------------
--------------------------------------------------------------------------------
CTCACCGTGGCGTCCCACCTCCCCGTCTCCGATCTCATCGGCTTCCTCCCCCTCCCCTCCTCCTCCTTCTACCTCACCAC
CGACGGCCGCCCGCTCGCGCCCTCCGCGCCCGTCGCCTCCCTCGCGCCGTCCGGTTCCGTCCAGCTCCGCCTCCGCGCGC
TCCGCGGCGGGGGCGGCGATGGCGGGTCCACCTGCGCCGAGTCCCGCGACTGCTACCTCTCCATGTACCTCGCGAAGAAG
CCCGACAAGGCCGATCCCAACGAGGCCCGCCTCTCCCGCTTCACCTGCTGCGCGCTCTCGGGGGAGCCTCTCGCCGCGCC
CGCTGTCGTGGATCGCCTGGGCAACCTGTTCAACAAGGAGGCCCTCGTCGAGGCGCTCATCCACAAGCGCCTGCCCAAGG
CGCTCTCGCACATCCGCGGGCTCAAGGACATGATCCCCATCCACCTGCACCCCAAGCCCAACGCGGCGGACCAGGAGGTC
CGTTTCCAGTGCCCGGTCACCGGGTTCGAGTTCAACGGCAAGTCCCAGTTCCTCGTGCTCCGTGGATGCGGGCACGTGCT
GAGCGTGAAGGCTCTCAAGGAGGTGAAGTCGTCCTCGTGTTTGGTCTGCCATAAGGAGTTTGATGAGATGGACAAGATGC
CCATCAATGGGACCGAGGAGGAGGTGGAAGTGTTGAGGCAGAGGATGGAGGAGGAGAGAGGGAAGCTGAAGGAGAAGAAG
GATAAGAAGCTGGCGAATGGGCTCAGTGGGAGTAAGCATGCTGCTGCTGC---GGTTGCAGACACTGAGAAGTTGGAGAA
TGGGAAGAAAGGGGAGGCTGCCCCAGCAAAGCGGTTTAAGGCTGCAGATCATGCACCGGCTCATGCAAACAAGAAAGTGT
ATGCGTCAATTTTCACTTCTTCCAATAAGTCTGATTTCAGGGAGACATACTCATGCCGGTCACTCCCCCTGGGAAGGAAT
TAAATCGACGTTGGGGAGATTACAATGGCGTGGAGGTGAACCTCTTGTACTGATTCAGCGATTAGCTTCATACCATGGCT
CGTCCATAAGTTCTGGTATTATTGTTTTAGCTGTTGGTGTTATCTATGCTTGACTGCTGTGTGGAGCTTTCTAGTTTTCA
CTCGCAGAGAAGCAATATGTTTTTATAAATGATTTGTGAAATATGTAATGGCTGTAACACATATCATTGAGTCCAGTCTT
CTCTAGCAATTTGTCTGAGTAATGCTGTAGTTTTCATTCAGAGAGAAG-AATATGTTTTTATAAATGCTTTGTGAAATAT
GTAATGGTTGAAACAGTTGGTGCTTATCATTGGG-CCAGTCTTCTCTAGCAGTTTGTCTGAGTAATGCTGTAATTCATTC
ACTTTGTTTCAAATTACTTCACATCTTAGGTCTCATCAGGACAAGCCTTTGACCAACAATTACTCTATTAGTATGTACTT
AATGTGACATAAAGTCGATGCTATTATATTCATATTTCAAAGTACTTCTTTAATTGCTGTTCAAAGGCTTATCCTAACAA
GACCGCATATACGAGGTAATTTGAAGCGGAGGGGGTACTAATTTATGTGCATGCCTAAGGGGACTCCCAAGTTAAATCAA
AGGGTTCCTAGTGTTCATTGCTGCAACTTCCACTGTATCTCGGCTGTGCAATCGTACATACAACTTGTTTGAATAATCTT
GGCTATGCAATCCTACATAGAACCTGTTTGAATAACACTGTGATTTATACGCATGCGCAAGTTGACTTTCAAGATAAATC
AAATGGTTTCTATGGTTTTCAATGTTGTAATCTCGACTGTGCCACTTTACTGAACAGATAAATTTGCATTGCGCTTGTTT
CTATGTTTAGTTGTCCATGAAGCACGAAATGCGCACAAAGACAGTGCGCGGTAGAACATTTGGCGGCCACATTAATATTA
GCATGACATTGGCAGTATGCTGTAGTTGCTCTTTGCATGCTTCTTTAGATA
>chr7B_731
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----------TCAACTGAGCCGT-CCGAGTCGAGCTCAGTCCAAAACTCCCAACCCAA-------------CCGAGCCCA
CTCCGC-----------------------GTACAGACGTCAGAGTTGACGTCTCTCGATTCCCCTCCGCGTCCAGCTTTC
CCATAGGAGCCAGCCACACCGCCCCGCACCGAACCATCCCGAT-------CCCCCATCGTCTCCGTTAGCTTCCCCTCCC
CCGCTCCCGAATCCGGCGCACCATCGTCGAAACCCTAACCCTAGCCCCACACCAGCCATGGCGCCCGCCACCGGCGCGAC
CCGGGCCGTGGTCCTCCGCCTCGACGACCTGTCCCTCCCGCCGCGGTACCTCACCNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGGTAC
CTCACCGTCGCGTCCCACCTCCCCGTCTCCGACCTCCTCAGCTTCCTCCCCCTCCCCTCCTCCTCCTTCTACCTCACCAC
CGACGGCCGCCCGCTCGCGCCCTCCGCGCCCGTCGCCTCCCTCGCGCCGTCCGGCTCGCTCCAGCTCCGCCTCCGCGCGC
TCCGCGGCGGGGGCGGCGATGGCGGGTCCACCTGCGCCGAGTCCCGCGACTGCTACCTCTCCATGTACCTCGCGAAGAAG
CCCGACAAGGCCGACCCCAACGAGGCCCGCCTCTCCCGCTTCACCTGCTGCGCGCTCTCGGGGGAGCCCCTTGCCGCGCC
CGCCGTCGTGGATCGCCTCGGCAACCTGTTCAACAAGGAGGCCCTCGTCGAGGCGCTCATCCACAAGCGCCTGCCCAAGG
CGCTCTCGCACATCCGTGGGCTCAAGGACATGATCCCCATCCACCTGCACCCCAAGCCCAACGCGGCGGACCAGGAGGTC
CGTTTCCAGTGCCCAGTCACTGGGTTCGAGCTCAACGGCAAGTCCCAGTTCCTCGCGCTCCGTGGATGCGGCCACGTTCT
GAGCGTGAAGGCTCTCAAGGAGGTGAAGTCGTCCTCGTGTTTGGTCTGCCATAAGGAGTTCGATGAGGCGGACAAGATGC
CCATCAATGGGACCGAGGAGGAGGTGGAAGTGTTGAGGCAGAGGATGGAGGAGGAGAGAGGGAAGCTCAAGGAGAAGAAG
GATAAGAAGCTGGCGAATGGGCTCAGTGGGAGTAAGCA---TGCTGTTGCTGCGGTTGCAGATGCTGAGAAGTTGGAGAA
TGGGAAGAAAGGGGAGGCTGCCCCAGCAAAGCGGTTTAAGGCCGCAGATCATGCACCGGCTCATGCAAACAAGAAAGTGT
ATGCGTCAATTTTCACTTCTTCCAATAAGTCTGATTTCAGGGAGACATACTCATGCCGGTCACTCCCCCTGGGAAGGAAT
TAAATCGATGTTGGGGAGATTCCAATGGCATGGAGGTGAACCTCGTGTACTGATTCAGCGATTAGCTTCATACCATGGCT
CGCCCATAAGTTCTGGTATTTTTGTTTTAGCTGTTGGTGTTATCTATGCTTGATTGCTGTGTGGAGCTTTCTAGTTTTCA
CTCGCAGAGAAGCAATATGTTTTTATAAATGATTTGTGAAATATGTAATAGCTGTAACACATATCATTGAGTCCAGTCTT
CT--AGCAATTTGTCTGAGTAATGCTCTAGTTTTCATTCAAAGAGAAGCAATATGTTCTTATAAATGCTTTGTGAAATAT
GTAATGGTTGAAACAGTTGGCGCTTATCATCGGGTCCAGTCTTCTCTAGCAGTTTGTCTGAGTAATGCTGTAATTCATTC
ACTT----------------------------------------------------------------------------
-------------------GCCATTACGTTCATATTTCAAAGTACTTCTTTAATTGCTGGTCAAAGGTTTATCCTAACAA
GACCGAATATATGAGGTAATTTGAAACGGAGGGGGTACTAATTTACGTGCATGCCTAAGGGGACTCCCAAGTTAAATCAA
AGGGTTCCTAGTGTTCATTGTTGCAACTTCCACTGT---------------------------------------ATCTT
GGCTATGCAATCCTACATACAACCTGTTTGAATAAGGCTGTGATTTATATGCATGCGCAAGTTGACTCTCAAGATAGATC
AAATGGTTTCTATGGTTTTCAATGTAGTAATCTCGACTGTGCCACTTTACTGAACAGATAAATGCGCATTGCGCTTGTTT
CGATGTTTAGTTGTCCATGAAGTACGGAATTCGCGAAATGACAGTGAGTGGTAGAACATTTGGCGGTCACATTAATCTTA
GCATGACACTGGCAGTATGCTGTAGTTGCTCTTTGCCTGCTTCTATAG---
>SNPs
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSS------------------------------------------------------S-----------------
-S------------------------------------------------------------------------------
-------------------------------S---SSSS-SSSSSSSSSS---------------S--------------
---------------------------------------------------------------------S----------
--------------------------------------------------------------------------------
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-------S------------------S-----------------------------------------------------
-------------------------------------------------------------SS-----------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------S-----
------------------------------S-------------------------------------------------
----------S---------------------------------------------------------------------
-------------------------------------------------------------------------------S
--------------------------------------------------------------------------------
----------------------------------------------------------------------S---------
----------------------------SS--------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------S--------------------------------------------------
----------------------------S---------------S-----------------S-----------------
--------------------S-----------------------------------------------------------
---------------------S--S---------------------------S-----------S---------------
--------------------------------------------------------------------------------
------------------------------------------------S-------------------------------
------------------------------------------S--S----------------------------------
--------------------------------------------------S-----------S-----------------
--------------------------------------------------------------------------------
S----------------------------------------------S--------------------------------
------------------------------------------------S--
>forward_577
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-----------------------------------------------------------------------------CTT
CCCTACGTCTCGCTGTG---------------------------------------------------------------
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---------------------------------------------------
>reverse_1851
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----------TACCGAGGAGGAGGTGGAAG--------------------------------------------------
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---------------------------------------------------
>forward_592
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------------CTGTGAGCGAGACATACGGG------------------------------------------------
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---------------------------------------------------
>reverse_2000
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-------------------------------------------------------------------------------G
TGGGAAGAAAGGGGAGGC--------------------------------------------------------------
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---------------------------------------------------
>forward_684
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------------------------CGATCGGGCCATCACTAAGG------------------------------------
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---------------------------------------------------
>reverse_2769
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------------------------------------------------ACATGCCTAAGGGGACTCC-------------
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---------------------------------------------------
