>input_sequence_62563
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---------------ATGGAGTCGGAGGGGCAGGACAGGCCGCTGGGCGAGGGGGAAGCAA------ACGCCGGCGGGGT
GGCTGAGCCGGGGGCGATGGCGATGGTGCCGGTGCCGGTACGCGGGGGGTACATGGTGGTGCCCAAGCCGGAGCCGGTGG
AGCTCTTCGGGGCCGG------CGGGGGCGGGATGGTGGTGCGCAAGCCGCCGCCGAGGAACCGGGACCGGCACACCAAG
GTCGAGGGCCGCGGCCGCCGGATCCGCATGCCGGCCGCCTGCGCCGCCAGGATCTTCCAGCTCACCCGCGAGCTAGGGCA
CAAGTCGGACGGCGAGACCGTGCGCTGGCTGCTGCAGCAGTCCGAGCCGGCCATCGTCGCCGCCACCGGCACCGGCACCG
TGCCCGCCATCGCCACCACCGTCGACGGCGTGCTCCGGATCCCCACCCAG---------TCCGCCTCCTCCGCCGTCGTC
GACGACGAGGCCTCCGCCAAGCGCCGCCGCAAGCTGCAGCCCACGCGCGCCGCCGGACCGCTCGCCACCGTGCCGCCCAC
CGCCGCCTACTACTCCGTCCTCGCCGACCCTCTCCTGCAGGGCGGCGCCGGGAGCGCGGCCATTTCCGTCGCCAGCGGCC
TCGCTCCAATCGGCGGTCAGCAGGGCCTCGTCCCCGTCTTCGCCGTCCCGTCCGCCGCTGGGGCCGCCGGAGCCAACCAC
ATGATCCCGCAGGCCACCGCCGTGTGGATGGTCCCGCAGCCGGCCGGCGCCCCCAACCAGCCCACCCAGTACTGGGCCTT
CCAGTCCGCGCCACAGCTCATCAACCTCGCCGGCGCGCAGACCATGCCGGCTGGAGCTGTGTTCCCCAACGTTGCCGCCG
ACTACCATCAACAGCAGCAGTCTGCTTCTACCGTGGTCCAGAACACCAACTCGGACCACCACCAGCAGCAGTTCAGCCAT
CATCTCACCGGCGCCGAGTCGCACGAGCAGCAGCGCCGCGACCACCACCCGGAGGAGGACGACGCCGATGATGACGACGA
GCCAGTCTCCGACTCCAGCCCAGAAGACTAA-------------------------------------------------
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>chr5D_1_TraesCS5D01G516300
AAAGTTGTCTTGATGCTCATCTATCATATCTCGTAATCGAAATAAGCAGCAATTGCCATCATAATCCGCATAGACTTAAG
CATTGTATCAACCTATGAATTTGTCAAAAGCCCTTCGTGACAAGTTAAGCCAAAAAAACTGACGTTCGCCCCATATAATT
TCCGAGAAAAAAAATACCCCATCGT-------CCAGTGCCGAGCGGAAGGAAAAGGCGCGTGGACGCACGCA--------
------------CGG-----TGGTATCTCTGGAGACGCGGGCCCAGATCTCCACCGTAACGGGCGGGTGGTCCCCGCCGT
CGGCGTGCTACGGTCCAGCTGGGACC-AACGCCAGGCCAGCTGCCAGTCCCACCCCCACCCACCGCCAGCGGGGCCACCC
CCGCCACACGCGCCGTCTGCCCCACCCCACCCCGT------CCGAAAGGTGCCTTTTTATTCCAGCGAGTGCTACATTTG
CATTTTGGTTTCGAAAGGCGCGGGAGCGGTCAGTCACGTGCACGGACGCGGATCTTAAGGCCATCAACCCCCATTAAACC
CTAATCAGGC-GGGCCCACCTCGTAATCACGCGTTAATTACCCC-TTTTATTCGCCTGGATTTGACCCGTACGCACGCAC
GCACACGCATCCGTGGGCAGTGGGGCCAGCGGTTTCTCAATGGGCGT-------GGTGGGCCCGGGGCTGATCCGACTGG
CTGGCCCAACGGGCAGGAGCAGGGGGGGGGAAACGACAGCCGCTCCCGGGCCCCCGGATCCGCCAGGATCAGGATCAAAT
GCGCGCCTGCCCGCGGGGCCCGGGCCCA-CTACAGCGCGGCGAGGGGAA----GGTGGACCCGGTCCCCACCACCAGCGC
CGGGACCCGGGATGGGCGGTGGCCCCACGCCGAGTGACACCACACGGGCAGCGGTAGGACCACCACCAAGTAACAACACC
CCACCCACCCCC-A-CCCCAACCCCACCCCACCATCTCCCGCGACACGCGAAAACACCACCAGCCGCGGCGCGCCGGGGA
ATTTGCCCGGCCGGGATGGAGTCGGAGGGGCAGGACAGGCCGCTGGGCGAGGGGGAAGCAA------ACGCCGGCGGGGT
GGCTGAGCCGGGGGCGATGGCGATGGTGCCGGTGCCGGTACGCGGGGGGTACATGGTGGTGCCCAAGCCGGAGCCGGTGG
AGCTCTTCGGGGCCGG------CGGGGGCGGGATGGTGGTGCGCAAGCCGCCGCCGAGGAACCGGGACCGGCACACCAAG
GTCGAGGGCCGCGGCCGCCGGATCCGCATGCCGGCCGCCTGCGCCGCCAGGATCTTCCAGCTCACCCGCGAGCTAGGGCA
CAAGTCGGACGGCGAGACCGTGCGCTGGCTGCTGCAGCAGTCCGAGCCGGCCATCGTCGCCGCCACCGGCACCGGCACCG
TGCCCGCCATCGCCACCACCGTCGACGGCGTGCTCCGGATCCCCACCCAG---------TCCGCCTCCTCCGCCGTCGTC
GACGACGAGGCCTCCGCCAAGCGCCGCCGCAAGCTGCAGCCCACGCGCGCCGCCGGACCGCTCGCCACCGTGCCGCCCAC
CGCCGCCTACTACTCCGTCCTCGCCGACCCTCTCCTGCAGGGCGGCGCCGGGAGCGCGGCCATTTCCGTCGCCAGCGGCC
TCGCTCCAATCGGCGGTCAGCAGGGCCTCGTCCCCGTCTTCGCCGTCCCGTCCGCCGCTGGGGCCGCCGGAGCCAACCAC
ATGATCCCGCAGGCCACCGCCGTGTGGATGGTCCCGCAGCCGGCCGGCGCCCCCAACCAGCCCACCCAGTACTGGGCCTT
CCAGTCCGCGCCACAGCTCATCAACCTCGCCGGCGCGCAGACCATGCCGGCTGGAGCTGTGTTCCCCAACGTTGCCGCCG
ACTACCATCAACAGCAGCAGTCTGCTTCTACCGTGGTCCAGAACACCAACTCGGACCACCACCAGCAGCAGTTCAGCCAT
CATCTCACCGGCGCCGAGTCGCACGAGCAGCAGCGCCGCGACCACCACCCGGAGGAGGACGACGCCGATGATGACGACGA
GCCAGTCTCCGACTCCAGCCCAGAAGACTAACGAAGCAGAGCAAAGCCACGAAAGCACTCCACTGCTC-CACTGCAGCCA
AAAGTCAATCCAAAGAAGAAACCTTAGGTTCTATTCTAGTGAAATATTTATTCTCCGATTATGTATTAGTCAGTAATGAT
ACCACTGTTGCCCCTACGGAGTGTTTTTCTGGTACCATGACTATTGCTGGTTGTCCCTAATTATTCTTGACCTTCAATCA
ATAAGAACACGAAACATGGAGAAAAAATTGAGCTTTGTTGATGATTTCCATCAGGGTTGTAAAACCCTGTTCAAAGTTCA
AACTTT-GGTTGGTTCCCTAACTGGAATGAAGCACTATACTGAACTAATACTGAACTACAGGCAAGACGAGTATCAGCTT
GAAAATGGTGCTACATTCTGTTAACTCTTCTGTTTCAGGATAATGTATCTGAAGGAAATTGTTCTTCATAGTAAAATGAT
ATACTGCATTACATTATTTTTTACAGAGAAGAAAAGGCATGCTCACATGCAGTGTACTATATTCTTATTTACTCATTTGA
CAAATTTCTTTTGATTTTCACATCGGTAGTTGCTGCTTGGATTGCTGGAATTTCATGAACAAGTTCCCAAGTAACC----
-------TCCTATCATTTCTGCTTCTGTAAATAGTGGCTTTTCCACTATTTTCACAGCCACACCAGAACTCTTTAATTCT
TCATGCTTTCATGTTAGAACAAAGTCAGTTTTCTGCTACTGGTTTTTTTCTTGT-ACACTTGCAGTTGCAGAGCAAATAA
CCAGGAATTTACTGCACAATCAGGAATTTACAGTGCCATGGCAAAATCTTTCCAGCTTGCTTTTGGTCTCATCTTGTTAC
TACAGTCCTGTCTTCATTATTATATTCTATAACTT------TAGTTCAAGGTTTCTCTAGACTCTGTAATCCAAGAGGCC
AAGACAGTGGGGATGAGTTTTCTTCTAGAGTCCTGTTGCTGGACCTGCACATAAAAGAGCTCACTTGCTTGTCTTTGAAT
TCATTTTCTCA
>chr5B_138
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---------------------------------------------------------ACTGATGTTCGCCCCGTATAATT
TTTGAGAAAATAAAGAAAAACTCCCCCATCGCCCAGTGCCGAGCGGAAGGAAAAGGCGCGTGGACGCACGCACGCGGGCG
CTCCCCGCTCCACGG-----TGGTATCTCTGGAGACGCGGGCCCAGATCTCCACCGTAACGGGCAGGTGGTCCCCGCCAT
CGGCGTGCCACGGTCCAGCTGGGGGCAAACGCCAGGCCAGCTGCCAGTCCCACCCCCACCCACCGCCAGCGGGG------
--GCCACACGCGCCGTCTGCCCCACCCCACCC-------GCCCGAAAGGTGCCTTTTCATTCCAGCGAGCGCTGCATTTC
------GGTTTCGAAAGGCGCGGGAGCGGTCAGTCACGTGCACGGACGCGGATCTTAAGGCCATCAGCCCCCATTAAACC
CTAATCCAACTGGGCCCACCTCGTAATCACGCGTTAATTACCCCGTTTTATTCGCTCGGATTTGACTCGTACGCACGCAC
GCACACGCATCCGTGGGCGGTGGGGCCAGCGGTTTCTTTGGACTTAATGGGCGCGGTGGGCCCGGGGCCGATCCGACTGG
CTGGCCCAACGGGCAGCA-----------------------GCTCCCGGGCCCCCGGATCCGCCAGGATCAGGATCAAAT
G----------CGCGGGGCACGGGCCCATCTACAGCGCGGCGAGGAGGGGGCGGGTGGACCCGGTCCCCACCACCAGCGC
CGGGACCCGGGATGGGCGGCGGCCCCACGCCGAGTGACACCACACGGGCAGCGGTAGGACCACCACCAAGTAACAACACC
CCACCCACCCCC-ACCCCCACCCCACCCCCACCATCTCCCGCGACACGCGAAAACACCACCAGCCGCGGCGCGGCGGGGA
ATTTGCC------GGATGGAGTCGGAGGGCCAGGACATGCCGCCGGGCGAGGGGGAGGCGCAGGGGCACGCCGGCGGTGT
GGCTGAGCCGGGGGCGATGGCGATGGTGCCGGTGCCGGTGCGCGGGGGGTACATGGTGGTGCCCAAGCCGGAGCCGGTGG
AGCTCTTCGGGGGCGCCGGGGCCGGGGGCGGGATGGTGGTGCGCAAGCCGCCGCCCAGGAACCGGGACCGGCACACCAAG
GTGGAGGGCCGCGGCCGCCGGATCCGCATGCCGGCCGCCTGCGCCGCCAGGATCTTCCAGCTCACCCGCGAGCTAGGGCA
CAAGTCGGACGGCGAGACCGTGCGCTGGCTGCTGCAGCAGTCCGAGCCGGCCATCGTCGCCGCCACGGGCACCGGCACCG
TGCCCGCCATCGCCACCACCGTCGACGGCGTGCTCCGGATCCCCACCCAGTCCTCCTCCTCCGCCTCCTCCGCCGTCGTC
GACGACGAGGCCTCCGCCAAGCGCCGCCGCAAGCTGCAGCCCACGCGCGCCGCGGGGCCGCTCGCCACCGTGCCGCCCGC
CGCCGCCTACTACTCCGTCCTCGCCGACCCCCTCCTGCAGGGCGGCGCCGGGGGCGCGGCCATTTCCGTCGCCAGCGGCC
TCGCTCCCATCGGCGGCCAGCAGGGCCTCGTCCCCGTCTTCGCCGTGCCGTCCGCCGCTGGGGCCGGCGGCGGCAACCAC
ATGATCCCGCAGGCCACCGCCGTGTGGATGGTCCCGCAGCCGGCCGGCGCCCCCAACCAGCCCACCCAGTACTGGGCCTT
CCAGTCCGCGCCCCAGCTCATCAACCTCGCCGGCGCGCAGACCATGCCGGCTGGAGCTGTGTTCCCCAACGTCGCCGCCG
ACTACCATCAACAGCAGCAGTCTGCCTCTACCGTGGTCCAGAACACCAACTCGGACCACCA------GCAGTTCAGCCAC
CATCTCACCGGCGCCGAGTCGCACGAGCAGCAGCGCCGTGACCACCACCCGGAGGAGGACGACGCCGATGACGACGACGA
GCCAGTCTCCGACTCCAGCCCAGAAGACTAACGAAGCAGAGCAAAGCCACGAAAGCACTCCACTGCACGCACCTCAGCCA
AAAGTCAATCCAAAGAAGAAACCTTAGGTTCTATTCTAGTGAAATATTTATTCTCCGATTATGTATTAGTCAGTAATGAT
ACCACTGTTGCCCCTAATGAGTGTTTTTTTGGTACCATGACTATTGTTGGTTGTCCCTAATTATTCTTGACCTTCAATCA
ATAAGAACACGAAACATGGAGAAAAACTTGAGCTTTGCCGATGATTTCCATCAGGGTTGTAAAACCCTGTTCAAAGTTCA
AACTTTTGGTTGGTTCCCTAACTAGAATGAAGCACTATACTGAACTA-----------CAGGCAAGAGGAGTATCAGCTT
GAAAATGGTGCTACATTCTGTTAACTCTTCCTTTTCAGGATAATATATCTGAAGGAAATTGATCTTCATAATACTGCAAT
TCTTTTT--------------------------------------------------------------------TTTTA
CAGCTTCCTTTTGATTTTTATATCGCTAGTTGCTGCTTGGATTGCTGGAATTTCA-GAACAAGTTCTGAAGTAACT----
-------TCCTGTCATTTCTGCTTCTGTAAATAGTGGCTTTTCCACTATTTTCACAGCCACGCCAGAACTCTTTAAGTCT
TCATGCTTTCGTCTTAGAACAAAGTCAGTTTTCTGCTACTAGGTTTTTT-TGGGCACACTTGCTGTTGCAGAGCAAATAA
CCAGAAATTTACTGCACAATCAGGAATTTACAGTGCCATGACCAAATATTTCCTACTTT-TTTTAGTCTCATCTTGTTGC
TACAGTCCTACAATCTGCAAATGAG--TATAACTTTGCTTATAGTTCAAGGTTTCTCTAGACTCTGTAACCCAAGA----
----CAGTGGGGATGAGTTTTCTTCTAGAGTCCTGTTGCTGGACCTGCACATAAAAGAGCTCACTTGCTTGTCTTTGAAT
TCATTTTCTCA
>chr4A_154
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-------------------------------------------------------------------------TATAATT
TCCGAGAAAAAAAAACTCCCATCGT-------CCAGTGCCGAGCGGAAGGAGAAGGCGCGTGGACGCACGC--------G
CTCTCCGCTCCACGGTGGTATGGTATCTCTGGAGACGCGGGCCCAGATCTCCACCGTAACGGGCGGGTGGTCCCCGCCGT
CGGCGTGCTACGGTCCAGCTGGGACC-AACGCCAGACCAGCTGCCAGTCCCGCCCCCACCCACCGCCAGCGGGG------
--GCCGCGGTGCCCGA--GCCCCACCCCACCCCCACCCCGCCCGGAAGGTGCCTTTTTATTCCAGCGGGTGCTACATTTT
G-----GGTTTCGAAAGGCGCGGGAGCGGTCAGTCACGTGCACGGACGCGGATCGTAAGGCCATCAG-CCCCATTAAACC
CTAATCCGAC-GGGCCCACCTCGTAATCACGCGTTAATTACCCCCTTTTATTCGCCCGGATTTGACCCGTACGCACGCAC
GCACACGCATCCGGGGGCGGTGGGGCCGGAGGTTT-------CTTAATGGGCGCGGTGGGCCCGGGGCTGATCCGACTGG
CTGGCCCAGCGGGCAGCAGGAGGCAGGGGGAAACGACAGCGGCTCCCGGGCCCCCGGATCCGGCAGGATCAGGATCAAAT
GCGCGCCTGCCCGCGGGGCCCGGGCCCA-CTACAGCGCGGCGGGGGGAA----GGTGGACCCGGTCCCCACCACCAGCGC
CGGGACCCGGGATGGGCGGTGGCCCCACGCCGAGTGACACCACACGGGCAGCGGTAGGACCACCACCAAGTAACAACACC
CCACCCACCCCCTACCCCCCACCCCACCCCACCATCTCCCGCGACACGCGAAAACACCACCAGCCGCGCCGCGGCGGGGA
ATTTGCCCGGCCGTGATGGAGTCGGAGGGGCAGGACAGGCCGCCGGGCGAGCGGGACGCGCACGCGCACGCCGGCGGGGT
GGCTGAGCCGGGGGCGATGGCGATGGTGCCGGTGCCGGTGCGCGGGGGGTACATGGTGGTGCCCAAGCCGGAGCCGGTGG
AGCTCTTCGGGGCCGG------CGGGGGCGGGATGGTGGTGCGCAAGCCGCCGCCCAGGAACCGGGACCGGCACACCAAG
GTCGAGGGCCGCGGCCGCCGGATCCGCATGCCGGCCGCCTGCGCCGCCAGGATCTTCCAGCTCACCCGCGAGCTAGGGCA
CAAGTCGGACGGCGAGACCGTGCGCTGGCTGCTGCAGCAGTCCGAGCCGGCCATAGTCGCCGCCACGGGGACCGGCACCG
TGCCCGCCATCGCCACCACCGTCGACGGCGTGCTCCGGATCCCCACCCAGTCCTCCTCCTCCGCCTCCTCCGCCGTCGTC
GACGACGAGGCCTCCGCCAAGCGCCGCCGCAAGCTGCAGCCCACGCGCGCCGCCGGCCCGCTCCCCACCGTGCCGCCCAC
CGCCGCCTACTACTCCGTCCTCGCCGACCCCCTCCTGCAGGGCGGCGCCGGGGGCGCGGCCATTTCCGTCGCCAGCGGCC
TCGCTCCCATCGGCGGCCAGCAGGGCCTCGTCCCCGTCTTCGCCGTGCCGTCCGCCGCTGCGGCCGCCGGAGGCAACCAC
ATGATCCCGCAGGCCACCGCCGTGTGGATGGTCCCGCAGCCGGCCGGCGCCCCCAACCAGCCCACCCAGTACTGGGCTTT
CCAGTCCGCGCCACAGCTCATCAACCTCGCCGGCGCGCAGACCATGCCGGCTGGAGCTGTCTTCCCCAACGTTGCCGCCG
ACTACCATCAACAGCGGCAGTCTGCCTCTACCGTGGTCCAGAACACCAACTCGGACCACCA------GCAGTTCAGCCAC
CATCTCACCGGCGCCGAGTCGCACGAGCAGCAGCGCCGTGACCACCACCCGGAGGAGGACGACGCCGATGACGACGACGA
GCCAGTCTCCGACTCCAGCCCAGAAGACTAACGAAGCAGAGCAAAGCCACGAAAGCACTCCACTGCACGCACTGCAGCCA
AAAGTCAATCCAAAGAAGAAACCTTAGGTTCTATTCTAGTGAAATATTTATTCTCCGATTATGTATTAGTCAGTAATGAT
ACCACTGTTGCCCCTACGGAGTGTTTTTTTGGTACCATGACTACTGTTGGTTGTCCCTAATTATTCTTGACCTTCAATCA
ATAAGAACACGAAACATGGAGAAAAATTTGAGCTTTGTTGATGATTTCCATCAGGGTTGTAAAACCCTGTTCAAAGTTCA
AACT-TTGGTTGGTTCCCTAACTGGAATGAAGCACTATACTGAACTA-----------CAGGGGAGGCGAACACCAGCTT
GAAA----------ATTCTGTTAACTCTTCTTTTTCAGGATAATGTATCTGAAGGAAATTGATCTTCCTATTAGAATAAT
GTACTGCATTACATTATTCTTTACAGAGAAGAAAAGGCATGCTCACATGCAGTGTACTATATTCTTATGTACTCATTTGA
CTAA-TTCTTTTGATTTTCACATCGCTTGTTGCTGCTTGGATTGCTGGAATTTCATGAACAAGTTCTGCCCTTTGACCGA
ATTAATTTCCTATCATTTCTGCTTCTGTAAATAGTGGCTTTTCCACTATTTTCACAGCCACACCAGAACTCTTTAATTCT
TCATGCTTTCATGTTAGAACAAAGTCAGTTTTCTGCTACTAGTTTTTTT-TTGT-ACACTTGCAGTTGCAGATCAAATAA
ACAGGAATTTACTGCACAATCAGGAATTTACAGTGCCATGACAAAATCTTTCCAGCTTT-TTTCTGTCTCATCATGTTGC
TACAGTCCTGTCTTTATTATTATATTCTATAACTTTGCTTATAGTTCAAGGTTTCTCTAGACTCTGTAACCCAAGA----
----CAGTGGGGATGAGTTTTCTTCTAGAGTCCTGTTGCTGGACCTGCACATAAAAGAGCTGACTTGCTTGTCTTTGAAT
TCATTTTCTCA
>SNPs
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS-----S---------S-------
--------------S-S---------------------------------------------------------------
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--------------------------------------------------------------------------SSSSSS
SS-------------------------------SS--------------------------------------------S
SSSSSS------------------------------------------------------------S-------------
------S-S-----------------------------------------------S-----------------------
------------------S------------------SSSSSSSSSS---------------------------------
----------------S--S---SS---------------S---------------------------------------
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-------------------------------------------------------------------------S------
-------------------------------------------S------------S--SS-------------------
---------------------------------------S----------------------------------------
-------------------------------------------------------S------------------------
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------------------------------------------------------------------S-------------
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--------------------------------------------------------S-----------------------
------------------------------S---------------------S---------------------------
-------S--------S-----------------------------S-------------------------S-------
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-------------------------S-----------------------------------SSSSSS------------S
--------------------------------------S--------------------------------S--------
------------------------------------------------------------------S-------------
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----------------------------S-----------------S---------------------------------
--------------------------S-----------------------------------------------------
-----------------------------------------------SSSSSSSSSSS----------------------
-------------------------------S-----------------------------S--------S--S---S--
S-----------------S-------------------------------------------------S-----------
-------------------------S----------------------------------------SS-------S----
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----------------------------------------S--------S------------------------------
----------------------------------------S-----------------SS----S-------------S-
---------------------------------------------------------------------S------SSSS
SSSS----------------------------------------------------------------------------
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>forward_153
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-----------------------------------------------------AAAAACTGACGTTCGCCCCA-------
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>reverse_1984
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---------------------------------------------------------------AGCAGCAGTTCAGCCAT
CAT-----------------------------------------------------------------------------
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>forward_682
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-----------------------GGCCAGCGGTTTCTCAATG--------------------------------------
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>reverse_2147
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------------------------------------------------------------------TCCACTGCAGCCAA
AAGTCA--------------------------------------------------------------------------
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