>input_sequence_62542
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------------------------------------------------ACCCG-----------------CTCGCAGCCT
TCCATCTTCCTCTACTCTATCTACTCCAGCATATATGGGTGGATCTACTAACCTTCCTCCTGGTTTCCATTTCTTCCCCT
CCGACGAAGAACTCGTCATCCATTTCCTCCGCCGCAAGGCGGCTCTCCTCCCATGCCGACCTGACATCGTCCCTACGCTG
CCTCAGAATCGCTACGATCCATGGGAGCTGAATGGTATGTACATAATACTTTCTTTCACAAACCTTTGTACATATCACAA
GTAATGTCTAGTCCTGATTCTGACAACTCTTTCAAGGCAAAGCACTTCAAGCAGGGAACCAGTGGTACTTCTTTAGCCAA
GCAACACAGAGTAGGACCTCACGAAATGGGTGCTGGAATCCCATCGGTGCCGATGAGGCAGTAAGTAGTGGCGGTTCTCA
TGTCGGCCTGAAGAAGACACTCGTCTTCTCCATTGGGGAGCCCTTTCAGGCGACCAAAACCAACTGGGTTATGCATGAGT
ACCACTTACTTGACGGGAATGGGG------GTACCAGCAGTTCAGGTAGTTCACGCAAGCGGTCTCACAAGAAGAAAGAC
CACCCAGACAAAGTGAGTGCTGCATACATGTTATCGCATCTAACATTTTCTTATACTCTGCATT--TAGCAGTATCATAT
ACGCATGACAAACGTGTCCAACATGCATGGATGATCATCGCAGGAATGCAGCAATTGGGTGGTG-TGTCGGGTGTTCGAG
TCGAGCTACGATTCGCAAGTGAGCTTCCACG--AGGAGGACATGGAGCTTTCATGCTTAGACGAGGTGTTCCTATCCCTA
GATGACTATGATGAAGTCAGTTTGCCGAAGAATTAGAACCTTTGCTAGCACATTTGAGAGAATGGGTTTTGTGCCTACCA
TGCCATCTGATCATGATGATACTCATAAGAGAAACATCTTTCTTAATGATCAAATGATCTGGTCGGTATTAAACCTAATT
CACTCCATCTAGACCAGAGATGTAATTATTCTCCTCCAAGAAGGTGCATGAAACAAATTTAATATGTTTTG---------
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>chr2D_1_TraesCS2D01G305300
GGGGCTGGGAAACATAGTATGCACTTCGGCTATAAAGATCACATGCATGCATATCAGCGGTCAAAACCAAATCAAATTAC
TATTTGTTGGTCCAAACAAATTCAAGGTGCTATTTGATGCATGATTGCTTGATATCTACATGATATCCAACACACGTCAA
ATAAGAGAGA--GTC-AAAACTTCGGTCTAATCAGCACAATAATTTAGTGGCAAGATGAGGTTTCGCA-TTACTTGCGCG
TGCAACCTAAACAAGACAATTGTTGATTCTGTCATCTCACCTAGCTCGTCATTCACTTCTCCTGATCTCAGATATGGATG
GGCATATGTCAGGATTGAGAAAACTCCGATCACATGATATTACGCTATATTGACAGTTCTCTTGGGCAGACATGGTACTT
TGAAGTGTACCTAAAGTAGCACACAAGCATCATGCTAGATTATGATGCAAGAGTCTGCTACTGAAACTTTGGACGGATGA
GATGGTTATGCAATGTAACATATCCAAGCAGAGTCAACGAAGATCAAATACATCCGCAAAAGGCTATCCTAAATTCCTAA
TTGAGGACACCCAAACCAGCATCATTGCTAGGCAAGAAACTGTCTGTCTTGCTCTCCGGCTTTGTTATAAAATATGTAGA
GCATGATGAGGCACCATGCATGCATGCATTGATGGGCTCTGTTAGTTCGTAACGATCCATCTAAACAGTAGAGCAATTTG
CAGTAAGTGCTCCGAACATCAAATATATAGGACATA---CTCTGTCCAAATCCAACATTAGTGTTGGCATAGCATCATTA
GCTCCCTCCATAT-AAAAATGGTGAGGAAAAGGAAGCATGACACTTAAGTTGGCAGGCTTCTCAAAGCAACCATGCTGCA
GCCGCCTTCAAAACCTTTCAACACTCCTTGAATTGCACGTCTCTCCCTCTCTCTCCCTTTCTCTACGTACAAATACACAC
ACGCATACAATCCCTATAAATACTACTAAGAAACCACGTGAAGCAAGCACCCG-----------------CTCGCAGCCT
TCCATCTTCCTCTACTCTATCTACTCCAGCATATATGGGTGGATCTACTAACCTTCCTCCTGGTTTCCATTTCTTCCCCT
CCGACGAAGAACTCGTCATCCATTTCCTCCGCCGCAAGGCGGCTCTCCTCCCATGCCGACCTGACATCGTCCCTACGCTG
CCTCAGAATCGCTACGATCCATGGGAGCTGAATGGTATGTACATAATACTTTCTTTCACAAACCTTTGTACATATCACAA
GTAATGTCTAGTCCTGATTCTGACAACTCTTTCAAGGCAAAGCACTTCAAGCAGGGAACCAGTGGTACTTCTTTAGCCAA
GCAACACAGAGTAGGACCTCACGAAATGGGTGCTGGAATCCCATCGGTGCCGATGAGGCAGTAAGTAGTGGCGGTTCTCA
TGTCGGCCTGAAGAAGACACTCGTCTTCTCCATTGGGGAGCCCTTTCAGGCGACCAAAACCAACTGGGTTATGCATGAGT
ACCACTTACTTGACGGGAATGGGG------GTACCAGCAGTTCAGGTAGTTCACGCAAGCGGTCTCACAAGAAGAAAGAC
CACCCAGACAAAGTGAGTGCTGCATACATGTTATCGCATCTAACATTTTCTTATACTCTGCATT--TAGCAGTATCATAT
ACGCATGACAAACGTGTCCAACATGCATGGATGATCATCGCAGGAATGCAGCAATTGGGTGGTG-TGTCGGGTGTTCGAG
TCGAGCTACGATTCGCAAGTGAGCTTCCACG--AGGAGGACATGGAGCTTTCATGCTTAGACGAGGTGTTCCTATCCCTA
GATGACTATGATGAAGTCAGTTTGCCGAAGAATTAGAACCTTTGCTAGCACATTTGAGAGAATGGGTTTTGTGCCTACCA
TGCCATCTGATCATGATGATACTCATAAGAGAAACATCTTTCTTAATGATCAAATGATCTGGTCGGTATTAAACCTAATT
CACTCCATCTAGACCAGAGATGTAATTATTCTCCTCCAAGAAGGTGCATGAAACAAATTTAATATGTTTTGACTACTATG
GAATATAAGTGTGTAATGGCCTAATGACCACTCTTTCAACTAGCAATTACTCAAGCATTTGATGGTTTCTCCTAAATAGC
AAAGGGCATGTCCTGAATGATCATTGTATGAAGTCAACAGTGAGCGCCATGAAGTGGCTTGTGGGGGGTAGGA-------
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--------------------------------CTT-----AGGAGTAGTTTTGGAGCGATGCAGGCAATGCTTGTGCATG
CCGACTTCTCCTCCAACTCATTGTGTTTCTATGTGTTGTGAACAATGTTATTGTGCCCACAAAGCAAAGGCCAAATGGAG
TCAGTCAGATGCTTTTAGATCACAAGGATAAAAAGAAAGAGCATGGTTGGAACTTGTGCAAGCATATTGCTATTGATGTC
ATCAATGAGATAAGCTCCAAAAGGTAATAATGTATATGTGTGTCCATTCCAGACAGAAAGTGTGCATGTGTGGGGAAGTG
GTACCACCATGCACTGGTAAGACTTGCCAAACCAGTTACCTGAAAATCAGGTAACCACTGAAGTTTCTAAACTTGTTTAG
TTATTTGCAGTGCATACTGCATAGTGCACTCGCTTTAGATCACTAATCATGGATAGCAACTTTTTAGTAACTTCTTTTAG
TACTAAATGGGTTG---TTGACTTCTTAATCCAACCCTAGAAATGCGATGATATAATTCTGTCTGTCCTAAGAGAAGTTG
GTAGTG-----CCTCCATCAATAGTTTTAGCATGCTTGTCGTTACTTTTCATGGCTTGCAATGCATGCTTACATCATAAA
AATGTGAAACAAAAAACATGGATAAAGAAAGAGAAAAACTAAACTAACTATAATTATGTTAGTGGTCTTCATGTGTTATC
ATTTGAGTAGTTCATCTAATGACTTTCCTATTGATGCGATACTGGAAGAGGGAATGTGAAGTTCACATTCCAACATTAGC
AGACAAATGGAATAAAGTAAAAATATATGTTTTAAGTAATTTATGTACATTCTTCGAAATCAGTGTTGAGTGTGGTCATG
ATA
>chr2A_1
GGGGCTGGGGAATATAGTACGCACTTCGGCTATAAAGATCACAAGCATGCATATCAGCAGTCAAAACCAAATCAAATTAC
TATTTGTTGGTCCAAACAAATTCAAGGTGCTATTTGATGCATGATTGCTTGATATCTACACGATATCCAACACACGTCAA
ATAAGAGAGAAAGTC-AAAACTTCGGTCTAATCAGCACAATAATTTAATGGCAAGAGATGGGGTTTCGCTTACTTCTGGT
ATC----------AGATAATTGTTGATTCTGTCGTCCCACCTAGCTCGTCATTCACTTCTCCTGATCTCAGATATGGATG
GGCATATGTGAGGTTTGAGAAAACTCCGGTCACATGATATTACGCTATATTGACAGTTCTCTTGGGCAGACATGGTATTT
TGAAGTGTACCTAAAGTAGCACACAAGCATCATGTTAGATTATGATGCAAGAGTCTGCTACTGAAACTTTGGATGGATGA
GATGGTTATGCAATGTAAGATATCCAAGCGGAGTCAACGAAGATCAAATACATCCGCAAAAGGCTATCCTAAATTCCTAA
TTAAGGACACCCAGACCAGCATCATTGCTAGGCAAGAAACTGTATGTCTTGATCTCCGGCTTTGTTATAAAATATGTAGA
GCATGATGAGGCACCATGCATGCATGCATTGATGGACTCTGTTAGTTAGTAACGATTCATCTAAGAAGTAGAGAAATTTG
CAGTAA---CTCTGAACATCAAATATATAGGAGATACTCCTCTGTCCAAATCCAACATTAGTGTTTGCATAGCATCATTA
GCTCCCTCCATATAAAAAATGGTGAGGACAAGGAAGCATGGCACTTAAGTTGGCAGGCTTCTCAAAGCAACCATGCTGCA
GCCGCCCTCAAAACCTTTCAACACTCCTTGAATTGCACGTCTCTCCCTCTCCCTCCCTTTCTCTACATACAAATACACAC
ACGCATACAACCCCTATAAATACTACTAAGAAACCACGTGAAGCAAGCACCCGTGCTCTCATCTTCCTTCCTCACAGCCT
TCCATCTTCCTCTACTCTATCTACTCCAGCATATATGGGTGGATCTACTAACCTTCCTCCTGGTTTCCACTTCTTCCCCT
CCGACGAAGAACTCGTCATCCATTTCCTCCGGCGCAAGGCGGCTCTCCTCCCATGCCGACCTGACATCGTCCCTACACTG
CCTCAGAATCGCTACGATCCATGGGAGCTGAATGGTATGTACCTAATACTTTCTTTCACAAACCTTTGTGCATATCACAA
GTAATGTCTAGTCCTGATTCTGACAACTCTTTCAAGGCAAAGCACTTCAAGCAGGGAACCAGTGGTACTTCTTTAGCCAA
GCAACACAGAGTAGGGCCTCACGAAATGGGTGCTGGAATCCCGTCGGTGCCGATGAGGCAGTAAGTAGTGGCGGCTCTCA
TGTCGGCCTGAAGAAGACACTCGTCTTCTCCATTGGGGAGCCCTTTCAGGCGACCAAAACCAACTGGGTTATGCATGAGT
ACCACTTACTTGACGGGAATGTGG------GTGCCAGCACTTCAGGTAGTTCACGCAAGCGGTCTCACAAGAAGAAAGGC
CAACCAGACAAAGTGAGTGCTGCATACATGTTATTGCACCTAACATTTTCTTAAACTCTGCATTTATAGCATTATCATAT
ACGCATGACAAACATGTCCAACATGCATGGATGATCATCACAGGAATGCAGCAATTGGGTGGTG-TGTCGGGTGTTCGAG
TCGAGCTACGATTCGCAAGTGACCTTCCACG--AGGAGGACATGGAGCTTTCATGCTTAGACGAGGTGTTCCTATCCCTG
GATGACTATGATGAAGTCAGTTTGCCGAAGAATTAGAACCTTTGCTAGCACAGTTGAGAGAATGGGTTTTGTGCCTACCA
TGCCATCTGATCATGATGATACTCATAAGAGAAACATCTTTCTTAATGATCAAATGATCTGGTAGGTATTAAACCTAATT
CACTCCATCTAGACCAGAGATGTAATTATTCTCCTCCAAGAAGGTGTGTGAAACAAATTTAATATGTTTTGACTACTATG
GAATATAAGTGTGTAATGGCCTAATGGCCACTCTTTCAACTAGCAATTAATCAAGCATTTGATGGTTTCTCCTAAATAGC
AAAGGGCATGTCCTGAATGATCATTGTATGAAGTCAACAGTGAGCGCCATGAGGTGGCTTGTGGGGGTTAGGA-------
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--------------------------------C-TTG----GGACTAGTTTTGGAGCGATGCAGGCAATGCTTGTGCATG
CCGACTTCTCCTCCAACTCATTGTGTTCCTATGTGTTGTGAACAATGTTATTGTGCCCACAAAGCAAAGGCCAAATGGAG
TCAGTCAGATGCTTTTAGATCACAAGGATAAAAAGAAAGAGCATGGTTGGAACTTGTGCAAGCATATTGCTATTGATGTC
ATCAATGAGATAAGCTCCAAAAGGTAATAATGTATATGTGTGTCCATTCCAGACAGAAAGTGTGCATGTGTGGGGAAGTG
GTACCACCATGCACTGGTAAGACTTGCCAAACCAGTTACCTGAAAATCAGGTAACCACTGAAGTTTCTAAACTTGTTTAG
TTATTTGCAGTGCATACTGCATAGTGCACTCGCTTTAGATCACTAATCATGGATAGCAACTTTTTAGTAACTTCTTTTAG
TACTAAATGGGTTG---TTGACTTCTTAATCCAACCCTAGAAATGCGATGATATAATTCTGTCTGTCCTAAGAGAAGTTG
GTAGTG-----CCTCCATCAATAGTTTTAGCATGCTTGTCGTTACTTTTCATGGCTTGCAATGCATGCTTACATCATAAA
AATGTGAAACAAAAAACATATATAAAGAAAGAGAAAAACTAAACTAACTCTAATTATGTTAGTGGTCTTCATGTGTTATC
ATTTGAGTAGTTCGTCTAATGACTTTCCTATTGATGCGATACTGGAAGAGAGACTGTGAAGTTCACATTCCAACATTAGC
AGACAAATGGAATAAAGTAAAAATATATGTTTTAAGTAATTTATGTACATTCTTTGAAATCAGTGTTGAGTGTGGTCATG
ATA
>chr2B_14
-------------ATAGTATGCACTTCGGCTGTAAAGATCACAAGCATGCATATCAGCGGTCAAAACCAAATCAAATTAC
TATTTGTTGGTCCAAACAAATTCAAGGTGCTATTTGATGCATGATTGCTTGATATCTACACGATATCCAACAAACATCAA
AAAAGAGAGAAAGTCAAAAACTTTGGTCAAATCAGCACAATAATTTAATGGCAAGATTAGGTTTCGCA-TTACTTCTGGT
ATC----------AGATAATTGTTGATTCTGTCATCTCACCTAGCTCGTCATTCACTTCTCCTGATCTCAGATATGGATG
GACATATGGGAGGATTGAGAAAACTCCAATTACATGATATTACGCTATATTGACAGTTCTCTTGGGCAGACATGGTATTT
TGAAGTGTACCTAAAGTAGCACACAAGCATCATGTTTGATTATGATGCAAGAGTCTGCTACTGAAACTTTGGATGGATGA
GATGGTTATACAATGTAACATATCCAAGCGGAGTCAGCGACGATCAAATACATCCGCAAAAGGCCATCCTAAATTCCTAA
TTAAGGACACCCAAACCAGCATCATTGCTAGGCAAGAAACTGTCTGTCTTGCTCTCCGTCTTTGTTATAAAATATGTAGA
GCATGATGAGGCACCATGCATGCATGCATTG---GGCTCTGTTAGTTCGTAACGATCCATCTAAACAGTAGAGCAATTTG
CAACAAATGCTCTGAACATCAAATATATAGGAGATACTCCTCT--CCAAATCCAACATTAGTGTTTGCGTAGCATCATTA
GCTCCCTCCATATAAAAAATGGTGAGGAAAAGGAAGCATGACACTTAAGTTGGCAGGCTTCTCAAAGCAACCATGCTGCA
GCCGCCTTCAAAACCTTTCAACACTCCTTGAATTGCACGTCTCTCCCTCTCTCTCCCTTTCTCTACGTACAAATACACAC
ACGCATACAATCCCTATAAATACTACTAAGAAACCACGTGAAGCAAGCACCCGTGCTCTCATCTTCCTTCCTCACAGCCT
TCCATCTTCCTCTACTCTATCTACTCCAGCATATATGGGTGGATCTACTAACCTTCCTCCTGGTTTCCACTTCTTCCCCT
CCGACGAAGAACTCGTCATCCATTTCCTCCGCCGCAAGGCGGCTCTCCTCCCATGCCGACCTGACATCGTCCCTACGCTG
CCTCAGAATCGCTACGATCCATGGGAGCTGAATGGTATGTACCTAATACTTTCTTTCACAAACCTTTGTACATATCACAA
GTAATGTCTAGTCCTGATTCTGACAACTCTTTCAAGGCAAAGCACTTCAAGCAGGGAACCAGTGGTACTTCTTTAGCCAA
GCAACACAGAGTAGGACCTCACGAAATGGGTGCTGGAATCCCATCGGTGCCGATGAGGCAGTAAGTAGTGGCGGTTCTCA
TGTCGGCCTGAAGAAGACACTCGTCTTCTCCATTGGGGAGCCCTTTCAGGCGACCAAAACCAACTGGGTTATGCATGAGT
ACCACTTACTTGACGGGAATGGGG------GTACCAGCAGTTCAGGTAGTTCACGCAAGCGGTCTCACAAGAAGAAAGAC
CACCCAGACAAAGTGAGTGCTGCATACATGTTATCGCATCTGACATTTTCT--TACTCTGCATT--TAGCAGTATCATAT
ACGCATGACAAACGTGTCCAACATGCATGGATGATCATCGCAGGAATGCAGCAATTGGGTGGTG-TGTCGGGTGTTCGAG
TCGAGCTACGATTCGCAAGTGAGCTTCCACG--AGGAGGACATGGAGCTTTCATGCTTAGACGAGGTGTTCCTATCCCTA
GATGACTATGATGAAGTCAGTTTGCCGAAGAATTAGAACCTTTGCTAGCACAGTTGAGAGAATGGGTTTTGTGCCTACCA
TGCCATCTGATCATGATGATACTCATAAGAGAAACATCTTTCTTAATGATCAAATGATCTGGTAGGTATTAAACCTAATT
CACTCCATCTAGACCAGAGATGTAATTATTCTCCTCCCAGAAGGTGCATGAAACAAATTTAATATGTTTTGACTACTATG
GAATATAAGTGTGTAATGGCCTAATGGCCACTCTTTCAGCTAGCAATTACTCAAGCATTTGATGGTTTCTCCTAAATAGC
AAAGGGCATGTCCTGAATGATCATTGTATGAAGTCAACAGTGAGCGCCATGAAGTGGCTTGTGGGGGTTAGGA-------
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--------------------------------C-T-----AGGACTAGTTTTGGAGCGATGCAGGCAATGCTTGTGCATG
CCGACTTCTCCTCCAACTCATTGTGTTTCTATGTGTTGTGAACAATGTTATTGTGCCCACAAAGCAAAGGCCAAATGGAG
TCAGTCAGATGCTTTTAGATCACAAGGATAAAAAGAAAGAGCATGGTTGGAACTTGTGCAAGCATATTGCTATTGATGTC
ATCAATGAGATAAGCTCCAAAAGGTAATGATGTATATGTGTGTCCATTCCAGACAGAAAGTGTGCGTGTGTGGGGAAGTG
GTACCACCATGCACTGGTAAGACTTGCCAAACCAGTTACCTGAAAATCAGGTAACCACTGAAGTTTCTAAACTTGTTTAT
TTATTTGCAGTGCATACTGCATAGTGCACTCGCTTTAGATCACTAATCATGGATATCAACTTTTTAGTAACTTCTTTTAG
TACTAAATGGCTTG---TTGACTTCTTAATCCAACCCTAGAAATGCGATGATATAATTCTGTCTGTCCTAAGAGAAGTTG
GTAGTGTAGTGCCTTCATCAATAGTTTTAGCATGCTTGTCGTTACTTTTCATGGCTTGCAATGCATGCTTACATCATAAA
AATGTGAAACAAAAAACATGGATAAAGAAAGAGAAAAACTAAACTAACTATAATTATGTTAGTGGTCTTCATGTGTTATC
ATTTGAGTAGTTCATCTAATGAGTTTCCTATTGATGCGATACTGGAAGAGAGAATGTGAAGTTCACATTCCAACATTAGC
AGACAAATGGAATAAAGTAAAAATATATGTTTTAAGTAATTTATGTACATTCTTTGAAATCAGTGTTGAGTGTGGTCATG
ATA
>chr3A_1330
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--------------------------------------------------------------------------AGCCAT
GCAGCACATAGTAGGACCTCACGAAATGG-TACTGGAGTCCCATCGGTACTGATGGGGCAGTCAGTAGTGGCGGTTTTAA
TGTCGGTCTGAAGAAGACGTTCATCTTCTCCATTGGGGAGCCCTTTCAGGCGACCAAAATAACCTGGGTGATGCATGAGT
ACCACTTACTTACGTGAAT--GGGGGTATAGTAAGAGCACCTCAGGTAGTTCACACAAGTGGCCTCGCAAGAAGAAAGGC
AACCCAGACAATGTGAGT-------ACATGTTATTGTATCTAGCATTTTGTTAAACTATGCATT--TAGCATCATAATAT
ATGCATGACAAACGTG-CCAACATGCAT---------------GGATGCAGAAATTGGGTGGTAATGCCGGGTGTTTGAG
CCAAGCTATGATTCGCAAGTGATCTTCCACACAAGGATGACATGGAATTTTCATGCTTAGATGAGGTGTTCCTATCCCTA
GATGACTATGATGAATTTAGTTTACCGAAGAATTAGAACCTTTGCTAGCATAGTTGATAGAATGAGTTTTGTGCGTATGA
TGCCATCTGATCATGGTGATACACATAAGAGAAGCTTCTTCCTTAATGATCAATTGGTATGGTAGGCATAAG-CCTAATT
AGCTCCATCTAGAACAAAGATGTAATTATTCTCCTCAAAG-AGGTGTATAAAATATATTTAATATGTTTTGACTACTACA
GAATATAAGTGTGTAATAGCCTAATGGGCAGTCTTTCAACTAGCGCTTACTCAATCATTTGATGGGTTTTCC----TAGC
AAAGGGCATGTCCTGGATGATCATTGTATGAGGTCA-CAGTGAGCACTATAAAGAGGCTTGTGGGGGTTATGA-------
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--------------------------------C-TTAGCTAGGACTGGTTTTGGAGAGATGCAAGCAATGCTTGTGCCTG
CCAACTA------CGACTCATTGTGTTTCTATGTGTTGTGAACAATGTTATTGTGCCCACAAATCAAAGGCCAAAATGAA
TCACTCAGATGCTTTTAGATCACATGGATAAAAAT---GAGCATGGTTATAACTTCCGCAAGCATATTGCTATGGA--TC
ATCAATGAGATGAGCTTCAAAAGGTAATAATGTATA--------------------------------------------
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>chr3B_1342
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------CAGTGTAGGACCTCATGAAATGG-TACTGGAGTCCCATCGGTACTGATGGGGCAGTAAGTACTGGCGGTTCTAA
TGTCGGTCTGAAGAAATA----ATCTTCTCCATTGGGGAGCCCTTTCAGGCAACCAAAATAACCTGGGTGATGCATGATT
ACCACTTACTTGACGTGAATGGGGGGTATAGTAAGAGCACTTCAGGTAGTTCACACAAGTGGCATCGCAAGAAGAAAGGC
AACCCAGACAATCTGGGTGCTGCATCCATGTTATTGTATCAAGCATTTTGTTAAACTATGCATT--TAGCATCATCATAT
GTGCATGACAAACGTG-CCAACATGCATGGATGATCATTGCAGGGATGCAGAAGTTGGGTGGTAATGCCGGGTGTTTGAG
TCAAGCTATGATTCGCAAGTGACCTTCCACA--AGGATAACATGGAGTTTTCATGCTTAGATGAGGTGTTCCTATCCCTA
GATGACTATGATGAATTTAGTTTACAGAAGAATTAGAACCTTTGCTAGCATAGTTGATAGAATGAGTTTTGTGCCTATGA
TGCCATCTGATCATGGTGATACACATAAGAGAAGCTTCTTTCTTAATGATCAATTGGTACGGTAGGCATAAG-CTTAATT
AGCTCCATCTAGACCAAAGATGTAATTATTCTCCTC----AAGGTGTATAAAATATATTTAATATGTTTTGACTACTACA
GAATATAAGTGTGTAATGGCCTAATGGGCAGTCTTTCAACTAGCGCTTACTCAAGCATTTGATGGGTTTACCTAAATAGC
AAAGGGCATGTCCTGGATGGTCATTGTATGAGGTCA-CAGTGAGCACTATAAAGAGGCTTGTGGGGGTTATGAATTAGAG
CATCTCCAGCCGTTGGCCCCCCAGGAGGCGCTAAAAATCGCCCCCTGGGGGCGCACCGGCGCTAAACCGCGCGCTGGGGG
CGTGATGCCCCCCAGTCGCGGCGCCCACGTTTTTTTGAAAATTTTAATTACGGCACAAACACGGTGCAAATTCAACCAAA
CTTCCGCGAGTTCGTTCATATTTAAACATATTTTACAAAAAAGGAAAAAAAACTACTAGGCTGCTCCTCGCCGTCTCCCT
CGCCGCTCCTCGCCGTCCGCCGCCCCTTGCGGTTCTACATGCCGAGGAGGCTGTAGAACCGCGTGTAGTCGCCGTCGTCG
TCATCGTCGTCGTCGTCGCCTCCTCCGCCGCGGCCGTCGTCCCTGCTGCAACCCTCCCCCGGTTGGCGCGGTGGGTTGGA
CGGTCCGGGGGCATCCTCGTCGTCGTCGCTGACGAGGATCACGACGCCGTGCTCGTCCTCGCGCCCACGTTTGCGGGCGT
CTATCTCCTCCAGGGCCCGGTGCTGCCGGACCATCTCGTCGCGGAGGTAGTCGTCCCACGCCCACTGTAGGGCCTCCTCG
TTAGAGAAGCCACACCGGGCTATCTCCTCGTACTCCGCGGGGAGGTCGGGCTCCGGCTTTAGCGCGACGAGGACGAAGTG
GCCAGAGGGGGGTGGAGTCGCCGATGCGGACGCTGGAGCTGCGTCTGCGCCCGCTGACAGGCGTGTCCTGGGGTTCCGGC
TTAACGGAGCGGAGGCAGGGAGAGCCGGACGAGCGGCCGGACGAGGAGGAGGACGCCCCGTGCTGCTCCATGCGCCTCGG
CGTCCACGAGCTCCCACGTCAGCGAGAGAAGGACGGGGGAGCGAGGTACTCGAGCCTCGGCGTGTTGCCGCCCTCGATGT
ACTCGAGGACGGCCTCAGCGTGCGGCCTGGCACGCCCCACCATCGGCGCCGCCCCTCGGAGTTGAGCCTTCCGGAGGGCA
CGGCGCCGTTCATGGCCTCGAGCTGTTCGGCGTGGCGGCGGCGGAAGTATGGCTCCCAGAGCGGGCTGTCGGGGACGTAC
CGCGGTCCTTCCCTCGCCGCGTGCGGCAGGGGGGCGTGGATACGTGCGATCTCCGCACGCCGCGCCGCCCCGGTGGGTGG
TGGTGGCACCGGGACACCGCCGGCGCTGGTTCTCCATGCCCCGGGCACCCGCATGTACGGCGGGACCGGGTACTCGGCCT
CGAAGAGGAGCCGAGCTTCGTCCTCGTGAAGATGGCGGCGGCCGAAGCCGTTCGCCGCCGTGCCGTCGCCTGGGAAGCGC
TCGGCCATGCTTTGAACTGGAGAAGGCGAGAGAAGAGGGAGGAAGGGGGAGAAATGGCGCATTTGCGGTGGAGGCTTTGT
ATGTGTCTCGGGCGCGCTGGGGGTCGGCTTATATAGACGGAGAGGCGCCGCATACGCGTGGCGGGCGAGGGGACGCACGT
CGTCTAGTCTTCACTGCGCCGCCCGTGAGGCATCAATGGAGGCTGACCGGCGCGGCAGCGCGCGACAGGTTTGGCATTGA
TTCGCCACGGGAAACGAGGCAATGAGGACGACGAAGCGGCGTGAAGAGCGATGAGTCGCTGGCAAGGAGGGTCCACGGCT
CTTTCGCGCCAAAAACGATTCGCCCGGTGCCCCCGAGCGCCCCCCAGCGCGCTGGGTTCGGGTTGGGTCCGCCGACGCCA
ATTTCGGCCTGAGCCGGCGAAAACTGGGCCCTTGGGGGCGCGATTGGGCCGATTTTTTGGCGCCGGCGGCCGAAAAGTCG
CCTGGGGGGCCGGGGGCGCGGCTGAAGATGCTC-TTAGCTAGGACTAGTTTCCGAGAGATGCAAGCAATGCTTGTGCCTG
CCAACTA------CAACTCATTGCGTTTCTATGTGTTGTGAACAATGTTATTGTGCCCACAAATCAAAGGCCAAAATGAG
TCAGTCAGATGCTTTTAGATCACACGGATAAAAA---AGAGCATGGTTATAACTTCCGCAAGCATATTGCTATGGATGTC
ATCAATGAGATAAGCTCCAAAAGGTAATAATGTATATGTGTGTACATTGCAGACAGAAAGTGTGTAGGTGTGGGCAAGTG
GTACCACCATGCAGTGGTGACGCTTGCCAAACCAG----------------TAACCACTGAAGTTTGTAAACTTGTTTAA
TCATTTGCAGTGCATGATGCATAGTGCATTGGCTTTAGATCACTAATCATGGATAGGAACTGTTTAGCAACTTCTTTTAG
TACTATATAAATGGGTATTGACTTCTTAATCCAACCCTAGAAATGTGATGATAT-ATTCTGTTTGTCCTAATTGAAGTT-
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---
>SNPs
---------S--S------------------------------S------------------------------------
------------------------------------------------------------S-------------------
-----------------------------------------------S---------S-----------------SS-SS
SS-SSSSSSSSSS---S---------------------------------------------------------------
---------S-------------------------------------------------------------------S--
----------------------------------S--------------------------------------S------
-----------------------------S--------------------------------------------------
--S-----------------------------------------------------------------------------
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------S-----S-------------------S--------------------------------S--------------
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-------------------------------------------------------------------------S------
---------------------------------------------------------------------S----------
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------------------------------------------S-------------------------------------
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----------------------------------------------------S---------------------------
---------------------------------------------------------------S----------------
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--------------------------S-----------------------------------------------------
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---------------------------------S----------S-----------------------------------
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--------------------------------------------------S-----------------------------
------------------------------------------------------S-------------------------
---
>forward_398
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---------------------------------------------------------TCTCTTGGGCAGACATGGTAC--
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>reverse_4045
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--------------------------------------------GTAGTTTTGGAGCGATGCAGG---------------
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