>input_sequence_62535
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---------------------------------------------------------------ATGGCTGCACCGATCAA
CGGGAGCAGCGGCTGGACGCTGCTCCGCCCGCTCTGCCAGGGCGCGTCTGGTGCTGCTGTATCTCTCGCGGAAGACGCGG
CCTCCGGGGAGCTCTTCGTCGTGAAGTCGGCGGCTGCCGGGGATGCCGCGCAGCTGCGCCGCGAATGGGGCATCATGTCC
GGCCTATCCTCCCCGCACGTCGTCAAGTGCCTAGGGTTCCGCTCGATCGGGGCGCTGGATCACCTGCTGCTGGAGTTCGC
GCCCGGCGGATCACTCGCCGACGTGGCGGCGGCGGCAAGGAACGGTGGAGGTTGTCACCAGCGGCGCGGGCTCGAGGAAG
AAGCCGTAAGGGCTTACGCGGCGGACGTGCTAAGGGGGCTGGATTACCTCCACGAGAGGCTCATGGTGCACGGGGACGTC
AAGGGAAGGAACGTGGTGGTCGGCGCCGACGGGCGGGCCAAGCTCGCCGACTTTGGCTGCGCGAGGGCGGCGGGTCATAC
AAAGCAGCCGTTCGGCGGCACGCCGACGTTCATGGCGCCCGAGGTGGCGCGCGGGGAGGAGCAGGGTCCCCCGGCGGACG
TGTGGGCGCTGGGGTGCACCGTCCTCGAGATGGCCACGGGCGGTCGCGTCCCGTGGGGTGACGCCGATGATAACGTGCTC
GCCGTGCTGCACCGAATCGGGTTCACCGACGCCGTACCAGAGGTGCCACAGTGGCTCTCGCCGGAGGCTAAGGACTTCCT
GGGCCGGTGCTTGCGGAGGCGCGCCTCTGACCGTGACACGGCGGCGCAGCTCCTAGAGCACCCATTCGTGGCACTGGCAA
CGCCAATCAAGAAAGAGGAGGAGGCGGTGAAGAAGCGGACGTGGGAGTCTCCCACGAGCACGCTGGACGCCGCACTTTGG
GAGTCAGACTTTGAGCCCGACGACGACGA---------------CATGTCGTCGAATAGCCCGGTCGGCAGGATCAGGGA
ATTGGCATGCACCGGCCTGCCGTTGCCCGACTGGGACCCCGACCAAGGCTGGATCGAAGTCTGCAGCTGTTAA-------
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------------------------------------------------------------------
>chr1A_1_TraesCS1A01G117800
GCTCTAATTATCCATCACTTTCATTGGTTATAAACAGGTTTTGGCTCAACGCTATCCCTTAAATCTGCCATGTAATTAAT
ATCCTATCATTCCTGCGAAAAAATAATTGATATCTTACCAAATATCAACGTCAACAGATATATCTTACATAATATAACAT
GAAACTAATTTTTTTTTAGGATAACATGAAACTAATATTTTACCTAATATAAACATGTATTGCACATACATTATTACTAT
TATCTAAAAAATATCTATGCAATCTAGTCCAGAGTGTTCGTGCGAGAGCGTGCGCGCTGCATTTTAGCGCGCCTGCTGGA
GTTACGTGCGTGCTAAATTTATCGCGACCGCTAGAGTCAGCGCTCCCCGCCACGCCAAAGCAGGCGATCGACGCGCTGCA
AACTTATTTTTAACGCGTCACGTGTTGGGCAGCTGTTGAAGATGCTCTCAGGATGCAAAGTGACCGGCAACGCTCGCTAG
TCGGTACTATTCCGCTGTTGTTCATTATCCCGTCGTCCATTGAAAGGAGGAATAATGTGGTCGACATCTTGTGTCCTCGT
TGTTTCTCCCTTCTACTTTC------------------ACC--GTATATAGACTCAACAGGT-----GGATGACTAACCA
AAACTCTAACA--GTTCTGCACATTTGGCACGTTTGATTCCTATTAAACTCGA------------AAATAAAACACGCCT
TCCATTTAGCCGCTAGTTTTCCCTGCCTGCACAACATGCATAT--------------------------------ATGGA
AGGAAAAAACTGGCTAAA-------------------------------ACATGTGTTCCCTTCCTAAATAAGCTCCACG
TTGCTAA-CTTCCCAACCGGCCATACTGGGCCACATGTCAATGAGCTATCGCCACGCGCTACCTACTCTGGCCCCTTTGA
CACTGCATGCAGATTGCCTGCCTGCCAGCATGCCAGCCTCCCGCTATGAATACCTTCCGCACCAGACCCATCGACGTACC
ACTGGGTGGCATTCCCGACACACAAACATGAACCACACCGCCGACGCCGGGAGAAAGCTAGCAATGGCTGCACCGATCAA
CGGGAGCAGCGGCTGGACGCTGCTCCGCCCGCTCTGCCAGGGCGCGTCTGGTGCTGCTGTATCTCTCGCGGAAGACGCGG
CCTCCGGGGAGCTCTTCGTCGTGAAGTCGGCGGCTGCCGGGGATGCCGCGCAGCTGCGCCGCGAATGGGGCATCATGTCC
GGCCTATCCTCCCCGCACGTCGTCAAGTGCCTAGGGTTCCGCTCGATCGGGGCGCTGGATCACCTGCTGCTGGAGTTCGC
GCCCGGCGGATCACTCGCCGACGTGGCGGCGGCGGCAAGGAACGGTGGAGGTTGTCACCAGCGGCGCGGGCTCGAGGAAG
AAGCCGTAAGGGCTTACGCGGCGGACGTGCTAAGGGGGCTGGATTACCTCCACGAGAGGCTCATGGTGCACGGGGACGTC
AAGGGAAGGAACGTGGTGGTCGGCGCCGACGGGCGGGCCAAGCTCGCCGACTTTGGCTGCGCGAGGGCGGCGGGTCATAC
AAAGCAGCCGTTCGGCGGCACGCCGACGTTCATGGCGCCCGAGGTGGCGCGCGGGGAGGAGCAGGGTCCCCCGGCGGACG
TGTGGGCGCTGGGGTGCACCGTCCTCGAGATGGCCACGGGCGGTCGCGTCCCGTGGGGTGACGCCGATGATAACGTGCTC
GCCGTGCTGCACCGAATCGGGTTCACCGACGCCGTACCAGAGGTGCCACAGTGGCTCTCGCCGGAGGCTAAGGACTTCCT
GGGCCGGTGCTTGCGGAGGCGCGCCTCTGACCGTGACACGGCGGCGCAGCTCCTAGAGCACCCATTCGTGGCACTGGCAA
CGCCAATCAAGAAAGAGGAGGAGGCGGTGAAGAAGCGGACGTGGGAGTCTCCCACGAGCACGCTGGACGCCGCACTTTGG
GAGTCAGACTTTGAGCCCGACGACGACGA---------------CATGTCGTCGAATAGCCCGGTCGGCAGGATCAGGGA
ATTGGCATGCACCGGCCTGCCGTTGCCCGACTGGGACCCCGACCAAGGCTGGATCGAAGTCTGCAGCTGTTAAGTGATGG
ATTTTAGCGTGTTCAGTCAAATAAGGACTCGG-ACCGAGGCTGGATTGGCGATCGTCGCGAAATGTCGGCCGATGATGTC
GTTAGGCAGTCCTCAAGATTTT---GTAGTACA------CAGCAGCAGCAGCCGAGCTCTTCAGTGATA--G--------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------TACAAGGCAGGGTGTGTGAAGCGTAGGGTCAGTAGCTATAGGAGTTGTGCGTAGTGAT
ATCAGAACGCATGCATTCTCCTAGAGCTGTTCAATGGCGCCCCCGGCTTTGATATA-TTGTGAAGAATATTTTTTA----
GAAGGCTTAGATTTGAGACAAAAATAGTTGTTGTTCCCCTCAGATTTTC---------TCCTGAATCTTTTGCCTACCTA
CGCCACCAAGTTGCAGCCGAGATAAACTACTTATATTTGCAAGGAATTTTAGATCCCCTGTTCCACCTCAAGTCGATCGG
TCCCAGCGAAATGGATTCATCGGACGATTTTCATATTGCTATGAATGAACTTCACAATCAGGGGAACAAAGAAAATGCGA
GCTTCGAGAAGCGTAATTGAACAATGGACACATCATTCTTATTTGTGCAAGAAGTAAAGTACTCCTTCTGTAAACTAATA
TAAGAGCGTTTAGATTATTAAGGAGGGAGTATTTCTTGAAGCCAATGGGCCGTGGACCAAACTATGCATGCTTCCATATT
GTAGCA--------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------GTTCCAACAATTGGCTTGGCTAC----------------
--------------------------------------------------------------------------------
------------------------------TAGAATTGTAGCACAGCCTTGCCCATTGCCCGGTTTTGAAGCTGTCACGA
CCTATTGCATCATTTTGTGGGTCGCCTTGAAAGGCATGTTCATGAAGGGCTACACAGACGTGCTCG----GCTCGACCGA
AAGGTGTGA----------------------------------------------------GAGGCCATCGCCCGGCCAT
GGACGCAGGCTGGATCATCTCTTGGCTCAATGTGAGGCCTCCATGATATGTGCTCGCCTATTTGTTACCGTGGCAGATCA
TTGAGCTCACCATAGGCCTGGAGGCTCCGACCGGCCGTTCATCTGGGTGACCAAGGAGGGGAGAAA
>chr1B_448
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------TCAGGATGCAAAGTGACCGGCACCACTCGCTCG
TCGGTACTATTCCGCTGTTGTTCATTATCCCGTCGTTCATTGAAAGGAGGAATAATGTGGTCGACATCTTGTGTCCTCGT
TGTTTCTCCCTTCTACTTTCCCTGCTGGCACTTGTTTCACC--ATATATAGACTCAACAGACAACAGGGATGACTAACCA
AAACTCTAATCATGTTCTCCACATTCGGCACGTTTGATTCCTATTAAACTCGAAGTTTACAGACAAAATAAAACACGCGT
TCCATTTACCCGCTAG-TTTCCCTGCCTGCACAACATGCATATGGAAGGG------------------------------
----AAAGCTGGTT--AAACATGTGTTCCCTTCCTCTCTTTTTTGAGGGACATGTGTTCCCTTCCTAAATAAACTCCACG
TTGCTAAACTTCCCAACCGGCCATATTGGCCCACATGTCAATGAGCTATCGCCACGCGCTACCTACCC-GCCCCCTTTCA
CA-----------------------CTGCATGCCAGCCTCCCGCTATGAATACCTTCCGCACCAGACCGATCGACGTACC
ACTGGGTGGCATTCCCAACACATAAACATGAACCACACCGCCGACGCCGGGAGAACGCTAGCAATGGCTGCACCGATCAA
CGGGGGCAGCGGCTGGACGCTGCTCCGCCCGCTCTGCCAAGGCGCGTCTGGTGCTGCTGTATCTCTCGCGGAAGACGCGG
CCTCTGGGGAGCTCTTCGTCGTGAAGTCGGCGGCTGCCGGGGATGCCGCGCAGCTGCGCCGCGAGTGGGGCACCATGTCC
GGGCTATCCTCCCCGCACGTCGTCAAGTGCCTAGGGTTCCGCTCGATTGGGGCGCTAGATCACCTGCTGCTGGAGTTCGC
GCCCGGCGGATCACTCGCCGACGTGGCGGCAGCGGCAGGGAACGGTGGAGGTTGTCACCAGCGGCGCGGGCTCGAGGAAG
ACGCCGTTAGGGCTTACGCGGCGGACGTGCTGAGAGGGCTGGATTACCTCCACGAGAGGCTCATGGTGCACGGGGACGTC
AAGGGAAGGAACGTGGTGGTCGGCGCCGACGGGCGGGCCAAGCTCGCCGACTTTGGCTGCGCGAGGGCGGCGGGTGATAC
AAAGCGGCCGTTCGGCGGGACGCCGACGTTCATGGCGCCCGAGGTGGCGCGCGGGGAGGATCAGGGTCCCCCGGCGGACG
TGTGGGCGCTGGGGTGCACCGTCCTCGAGATGGCCACGGGCGGTCGCGTCCCGTGGGGAGACGCGGATGATAACGTGCTC
GCCGTGCTGCGCCGAATCGGGTTCACCGACGCCGTACCGGAGGTGCCACAGTGGCTCTCGCCGGAGGCTAAGGACTTCCT
GGGCCGGTGCTTGCGGAGGCGCGCCTCTGACCGTGCCACGGCGGCGCAGCTCCTAGAGCACCCATTCGTGGCACTGGCAA
CGCCAATCAAGAAAGAGGAGGAGGTGGTGAAGAAGCGGACATGGGAGTCTCCCACGAGCACGCTGGACGCGGCGCTTTGG
GAGTCAGACTTTGAGCCCGACGACGACGATGACGACGTGGAGGGCATGTCGTCGAATAGCCCGGTCGGCAGGATCAGGGA
ATTGGCATGCACCGGCCTGCCGTTGCCCGACTGGGACCCAAATCAAGGCTGGATCGAAGTCTGCAGCTGTTAAGTGATGG
ATTTTAGCGTGTTCAGTCAAATAAGGACTCCG-ACCAAGGCTGGATTGGCGATCATCGCGACATGTCGGCCGATGATGTC
GTTAGGCAGTCCTCAAGATTTTATGGTAGTACC------ATGCAGCAGCAGCCGAGCTCTTCAGGGCATGTACAATGGTG
CTATCTTAAGAGTGCCACGTAGGATAAATGATGATGTGGAGGAGAGAGAACTCATAAAAAAAGGCTTGTCTTCTCTTATT
TAAGAGAAGACAAGAGATGATCTCTTAGCACAATATGTCTCACCACATTTTTAGGAATGACTAGTTATTGAAGATAAGGC
TAAGAGATGACCCATTGTAGACTCTTTTTTTTATCATATCTAAATTACATGCAAGATTTAAGATAAGACTACCTTATCAA
CCATTGTACATGCCCTCAGTGATACAAGGCAGGGTGTGTGAAGCGTAGGATCAGTAGCTATAGGAGTTGTGCGTAGTGAT
ATCAGAACGCATGCACTCTCCTAGAGCTGTTCAATGGCGCCCCCAGCTTTGATATAATTGTGAAGAATATATTTTA----
GAAGGCTTAGATC---GAGAAAAATAGTTGTTATCTCCCTCAGATTTTCATGATTTTCTCCTGAATCTTTTGCCTACCTC
CGCCACCAAGTTGCAGCCAGTATAAACTACTTATATTTACAAGGATTTTT------------------------------
--------------------------------------------------------------------------------
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>chr1D_520
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---------------------------------------TTGAAAGGAGGAATAATGTGGTCTACATCTTGTGTCCTCGT
TGTTTCTCGCTTCTACTTTCCCTGCTGGCACTTGTTTCACCATATATATAGACTCAACAGGT-----GGATGACTAACCA
AACC-CTAATCGTGTTCTCCACATTTGGCACGTTTGATTCCTATTAAACTCGAAGTTTACACACACGAAAAAACACGCGT
TCCATTTACCCGCTAGTTTTCCCTGCCTGCACAACATGCATATGGAAGGAAAACCTCTGCACTGTGTTCAAAAATATGGA
AGGAAAACCTGGTT--AA-------------------------------ACTTGTGTTCCCTTCCTAAATAAGCTCCACG
TTGCTAAACTTCCCAACCGGCCATACTGGCCCACATGTCAATGAGCTATCGCCACGCGCTACCTACCCTGCCCCCTTTCA
CACCGCATGCAGATTGCCTGCCTGCCTGCATGCCAGCTTCCCGCTATGAATACCTTCCGCACCAGACCGATCGACGTACC
ACTGGGTGGCATTCCCAACACACAAACATGAAACACACCACCGACGCCGGGAGAAAGCTAGCAATGGCTGCACCGACCAA
CGGGGGCAGCGGCTGGACGCTGCTCCGCCCGCTCTGCCAAGGCGCGTCCGGAGCTGCTGTATCTCTCGCGGAAGACGCGG
CCTCTGGGGAGCTCTTCGTCGTGAAGTCGGCGGCTGCCGGGGATGCCGCGCAGCTGCGTCGCGAATGGGGCATCATGTCC
GGCCTATCCTCCCCGCACGTCGTCAAGTGCCTAGGGTTCCGCTCGATCGGGGCGCTGGATCACCTGCTGCTGGAGTTCGC
GCCCGGCGGATCACTCGCCGACGTGGCGGCGGCGGCAAGGGACGACGGAGGTTGTCACCAGCGGCGCGGGCTCGAGGAAG
GCGCCGTAAGGGCTTACGCGGCGGACGTGCTGAGGGGGCTGGATTACCTCCACGAGAAGCTCATGGTGCACGGGGACGTC
AAGGGAAGGAACGTGGTGGTCGGCGCCGACGGGCGGGCCAAGCTCGCCGACTTTGGCTGCGCGAGGGCGGCGGGTGATAC
AAAGCGGCCGTTCGGCGGCACGCCGAGGTTCATGGCACCCGAGGTGGCGCGCGGGGAGGAGCAGGGTCCCCCGGCGGACG
TGTGGGCGCTGGGGTGCACCGTCCTCGAGATGGCCACGGGCGGTCGCGTCCCGTGGGGAGACGCGGATGATAACGTGCTC
GCCGTGCTGCACCGAATCGGGTTCACCGACGCCCTACCGGAGGTGCCACAGTGGCTCTCGCCGGAGGCTAAGGACTTCCT
GGGCCGGTGCTTGCGGAGGCGCGCCTCTGACCGTGCCACGGCGGCGCAGCTCCTAGAGCACCCATTCGTGGCACTGGCAA
CGCCAATCAAGAAAGAGGAGGAAGCGGTGAAGAAGCGTACATGGGAGTCTCCGACGAGCACGCTGGACGCGGCACTTTGG
GAGTCAGACTTTGAGCCCGACGACGACGATGACGACGTGGAGGGCATGTCGTCGAATAGCCCGGTCGGCAGGATCAGGGA
ATTGGCGTGCACCGGCCTGCCGTTGCCCGACTGGGAGCACGAACAAGGCTGGATCGAAGTCTGCAGCTGTTAATTGATGG
ATTTTAGCGTGTTCAGTCAAATAAGGACTCGAAACGGAGGCTGGATCGGCGATCGTCGCGAAATGTCGGCCGATGATGTC
GTTAGGCAGTCCTCGAGATTTT---GTAGTACAGAGCAGCAGCAGCAGCAGCCGAGCTCTTCAGTGATACTG--------
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----------------------TACAAGGCAGGGTGTGTGAAGCGTAGGGTCAGTAGCTATAGGAGTGATGCGTAGTGAT
CTCAGAACGCATGCATTCTCCTAGAGCTGTTCAATGGCGCCCCCAGCTTTGATATAATTGTGAAGAATGTTTTTTAAGTA
GAAGGCTTAGA-TTGAGAGGAAAATAGTTGTTGTCTCCCTCAGATTTTCATGATTTTCTGCTGGATCTTTTGCCTACCTC
CGCCGCGAAGTTGCAACCAGGATAAACTA---------------------------------------------------
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>chr1D_2407
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--------------------GATAAACTACTTACATTTGCAAGGAATTTTAGTTCCACTGTTCCACCTCAAGTCGATCAG
TTGAAACGAAATGGATTCATTGGATGATTTTCATGTAGCTATGAATGAACTTCACAATCAGGAGAACAAAGAAAATGTGA
GCTCCGAGAAGCGTAATTGAACAATGGACACATCATTCTTATTTGTGCAAGAAGTAAAGTA-------------------
-------------------------------TTTCTGGAAGCCGATGGACCATGGACCAAGCTATGCATGCTTCCATACT
GTAGCACGAGCAATGCTACATCCACATAATGGTTTAGCGTAAGGTTACGAACTGATCTGACATGGGACTATTTGGTTGGA
TTAAAAAAGAGGATTAGGCCCACCCCACCTGAAAATAGGAAAGGGGGGCATATATAGATTAGATGGAAGTTTAGGTAGCA
GCTACGTAGCCCTTCGTAAGTCTAGAATTTTCGCTATAGCACTTCCCACAATTGGCTTGGCTAA----------------
--------------------------------------------------------------------------------
------------------------------TAGAACTGTAGCACAA-CTCGCCCGTTGCTCGGTTTTGAAGCTGTAACGA
CCTATTGCATCATTTTGTGGGTCGCCTTCAAAGGCACATTCACGGAGGGCTACGCAGGCGCGCTCG----GCTCGACCGA
AAGGTGTGAGCAGTCCGACCATCCTGCCTTCTAAACTACAACATTGAGACGGCGGCCGGGAGAGGCCATCGCGCGGCCAT
GGACGCAAGCTGGATCATCTCTTGGCTCGATGCGAGGCCTCCAAGATATGTGCTCGCCTGCTTGTTACCATGGCAGATCA
TTGAGCTCACCATCGGCCTGGAGGCTCCGACCGGCCGTTCATCTGGGTGACCAAGGAGGGGAGAAA
>chr1B_2422
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-----------------------------------TTTACAAGGAATTTTAGTTCCCCTGTTCCACCTCAAGTCGATCAG
TCGAAACGAAATGGATTCATCCGACGATTTTCATGTTGCTATGAGTGAACTTCACAATCAGGGGAACAAAGAAAATGCGA
GCTTCGAGAAGCGTAATTGAACAATGGACACATCATTCTTATTTGTGCAAGAAGTAAAGTA-------------------
-------------------------------TTTCTGGAAGCCGATGGACCGTGGACCAAGCTATGCATGCTTCCATGCT
GTAGCA--------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------CTTCACACAATTGGCTCACCTAAATATTTGTTTTTCTAG
ATATTTCAACAAGTGACTACATACGAAGCAAAATAAGTGAATCTACACTGTATGCACATCCGTATATGGTAGAAATCTCT
AAAAAGACAAATATTTAGGAACGGAGAGAGTAGAACTGTACCGCAGCCTTGCCCATTGCCCGGTTTTGAAGCTGTCACGG
CCTATTGCATCATTTTGTGGGTCGCCTTCAAAGGCACGTTCCTGGAGGGCTACGCAGACGCGCTCGGCTAGCTCGACCGA
AAGGTGTGAGCAGTTCGACCATCCTGCCTCCTAAACTACAACATTGAGAGGACGGTCGTTAGAGGCCATCGCGCGGCCAT
GGACGCAGGCTGGATCATCTCTTGGCTCGATGCGAGGCCTCCACGATATGTGCTCGCCTACTTGTTACCGTGGCAGATCA
TTGAGCTCACCATCGGCCTGGAGGCTCCGACCGGCCGTTCATCTGGATGACCAAGGAGGGGAGAAA
>SNPs
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS----------------------S-S------S-
------------------------------------S-------------------------------------------
-------------------------------------------S------------------------------------
---------SS-------S-----------------------------------------------------------S-
--------S-----------------------------------------------------------------------
-------SSSS-SSSS----------------------------------------------------------------
-----------------------------S------------------------------------S---S-------S-
---S----------------------S-----------------------------------------S-----------
----------------S---------------------------------------------------------------
----S----------------------------------S----------------------------------------
----S---------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-S-----------------------------S------------------------------------------------
---------------------------------------------------------------------------S----
-----S--------------------------------------------------------------------------
----------------------------------------------------------S-----S---------------
--------------------------------------S-----------------------------------------
-----------------------------------S--------------------------------------------
----------------------------------------S-----------------------------S---------
--------------------------------------------------------------------------------
------------------------------------------S-------------------------------------
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--------------------------------------------S-----------------------------------
------------------S---------------SS-------------------------------------------S
------------------SS--------------------------------S-------------------------S-
--SS-S----------------------------S---------------------------------------------
-------------------------------------------------------------SSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS-----S------S----S-----------S-----------------S-
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------S----S----------------S----------------
--------------------------------------------------------------------------------
-----------------------------------S--------------------------------------------
----------------------------S-------S-------S--------S------S-------------------
------------------------------------------------------------------------S-------
----------------------------S---S----------S----------------S-------------------
-------------S----------------------------------------------------
>forward_441
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---------------------GTGTTGGGCAGCTGTTGAAG---------------------------------------
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>reverse_1991
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----------------------------------------------------------------------CGCACTTTGG
GAGTCAGACT----------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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------------------------------------------------------------------
>forward_442
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
----------------------TGTTGGGCAGCTGTTGAAGA--------------------------------------
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------------------------------------------------------------------
>reverse_2123
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------------------------------------------CCAAGGCTGGATCGAAGTCT------------------
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------------------------------------------------------------------
>forward_964
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----------------------------------------------------------------ACTCTGGCCCCTTTGA
CACT----------------------------------------------------------------------------
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>reverse_3089
--------------------------------------------------------------------------------
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------------------------------------------------GCCGTGGACCAAACTATGCA------------
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------------------------------------------------------------------
