>input_sequence_62533
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---------------------------------------------ATGGAGCCGGTCGTGAAGGTGTACGGGCCAGCCAT
GTCTTGGAACATAGCCAGGGTCCTTGTGAGCCTGGAAGAGTCCGGCGTCAAGTACGAGCTCGTCGCCGTCGACTTCGCCG
CGGCCGAGCACAAGAGCCCCGCCCACCTTGCTAGGAACGTATGTAGGCCTCTCTCGCTCTTCTAATTGCCTATGAGACGA
CTATATCCTGCTCTGTGTTCCTTTTCCTACGTTGGTATTGCTGATTAGCTCTTTTCACAGCCATTCGGTCAGGTCCCAGT
TTTGAAGGACGGTGACTTTTGCCTCTGGGGTAAGAAACTTCAGAAACCATCTACGCCCTCCGTTTCCAATATTGAACTAC
CAAAATGTCACATG----TTTAGGAGCGGGGGAAGTAAATATTTTTCCTCTTTGCTAATGTTTAGCGATTCCCTTGGCCA
GGGCAGGCAGAGTAATTTAGCATGGATGCATAACTGGTATCCATTTACATAGTATTACTCAGATACGCCTTGGGAGAAAA
CTTTCTGTTGAAATTGAACATGTTTCAAGCCTAGCTCACATCACATATATTGTCTATGCAACAGAGTCACGCGCAATCAC
GAAATATATATGCCGAAAGTACAAACCTGAGCTCCTTGGGGTTGGCAATCTCGAGGGATCAGCAATGGTCGATGTGTGGC
TGGAGGTGGAGGCCCACCACTACCGTCCTCTCATAGAGGCTGTTCTTATGGAGATCAGGATCCGGCCGATTTTCGGGCAA
AGGGTTGATGAGAGGGCCGTTGAGGAGAACATTGACAAGCTGAAGAAGGTGTTGGATGTGTATGAGTCCAGATTGTCGAG
CTCCAAGTACCTAGCTGGAGATTTC--------ATCAGCCTCGCCGACCTCAACCACGTCTCCACCATGCTTTGCCTAGG
GATCACTATATACACATCGGTGCTCGACATGTACCCGCATGTAAGGGCCTGGTGGGATGACCTGAAGGGCAGGCCAGCGG
CGAGGAAGGTGTCGGATCTAATGCACATGTCCGTGAAGAATGATCTAAAATGA---------------------------
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>chr7D_1_TraesCS7D01G479100
AGAGTAGAAAGTACCAAAGAATTGTGCCGTATAAGAGGCCGTGGAGTATTGCCCATTGCTTGTGTGTGCTTCCACGCAAT
GTCATCTTCGGCATACTCATCTAGGCGGAAGTGGTGAATGGTTGTCTAAAGGACCAAAATTGATGGGTGTGCTCTAAACT
GAAGTTGGCGGATATCTTGACCTTGGAGAGCCAAGCATTCTCGAAGAGAGCTTTCTTTGACATTTACTTTTGACTTAGAT
TTCCTCTGAAAACTATGTACTCAGGGTCGT-CATGGAGCCTGGACTTTTGAAAAATTCAAAAACCAAATCTGAGGTTTCA
AAAAATTCTGAAAAAAATTACACACGTGCATATAGATGTATACCACTTTTTGTAAATTTCATGATGAATACATTTTTGAG
TGAGCTACACAAAGAGAACAAAATCATACATTTCTACCAGATGCACTATTTACTATTGCATCTGTACCAAAATGTAAGAC
CTTTTTGAGTTTTGCATAGGGGATAAAAAATATTTTACATTTTGTAACGAAAGGAATATAAAAGTCGACGATATTTTTTT
TT--ATATAGCTCACACAAAAATGAGTTTCATCATCTACATTTACAGCATTGTGGTATACACGTGTACTTTTTAGAATTA
CTCCATCTGTAACTTTTTTATAAAACGTTTTCAGAGTCAAAAAAACGTCTTATAAAAAGTTACAGAGGGAGTATTTGATA
AGAAACCTTATTTAGAAAGAAAAAATCGGGCTCCACGGGGCTCGGGAGCAAGAAATCCTCTCATATAAAACCCTCCTCGT
GGAACATGACAAGCGTGGCAGACAAATATTTTGACCAAGGTTGCGGTTCTAAGCTTGCATCCTACGTAGATAAGATAAGA
TAATTAACATACTAGCAGTCAAACGGAAGGGGTGGAGGACGGGGGAATATATAT--GCGTGGCCATAATTTCAGGCAAAG
ATATTCTGTAGCGACTTGAAGAGCGAAGCCGGCCGGAAGAGCAACATGGAGCCGGTCGTGAAGGTGTACGGGCCAGCCAT
GTCTTGGAACATAGCCAGGGTCCTTGTGAGCCTGGAAGAGTCCGGCGTCAAGTACGAGCTCGTCGCCGTCGACTTCGCCG
CGGCCGAGCACAAGAGCCCCGCCCACCTTGCTAGGAACGTATGTAGGCCTCTCTCGCTCTTCTAATTGCCTATGAGACGA
CTATATCCTGCTCTGTGTTCCTTTTCCTACGTTGGTATTGCTGATTAGCTCTTTTCACAGCCATTCGGTCAGGTCCCAGT
TTTGAAGGACGGTGACTTTTGCCTCTGGGGTAAGAAACTTCAGAAACCATCTACGCCCTCCGTTTCCAATATTGAACTAC
CAAAATGTCACATG----TTTAGGAGCGGGGGAAGTAAATATTTTTCCTCTTTGCTAATGTTTAGCGATTCCCTTGGCCA
GGGCAGGCAGAGTAATTTAGCATGGATGCATAACTGGTATCCATTTACATAGTATTACTCAGATACGCCTTGGGAGAAAA
CTTTCTGTTGAAATTGAACATGTTTCAAGCCTAGCTCACATCACATATATTGTCTATGCAACAGAGTCACGCGCAATCAC
GAAATATATATGCCGAAAGTACAAACCTGAGCTCCTTGGGGTTGGCAATCTCGAGGGATCAGCAATGGTCGATGTGTGGC
TGGAGGTGGAGGCCCACCACTACCGTCCTCTCATAGAGGCTGTTCTTATGGAGATCAGGATCCGGCCGATTTTCGGGCAA
AGGGTTGATGAGAGGGCCGTTGAGGAGAACATTGACAAGCTGAAGAAGGTGTTGGATGTGTATGAGTCCAGATTGTCGAG
CTCCAAGTACCTAGCTGGAGATTTC--------ATCAGCCTCGCCGACCTCAACCACGTCTCCACCATGCTTTGCCTAGG
GATCACTATATACACATCGGTGCTCGACATGTACCCGCATGTAAGGGCCTGGTGGGATGACCTGAAGGGCAGGCCAGCGG
CGAGGAAGGTGTCGGATCTAATGCACATGTCCGTGAAGAATGATCTAAAATGATTATGTTGGCAAC-------TCTTTCA
TTAATGTGTTTGTACTTTTTCGGTATTTGGTCAAGGTGTTTGTGTTGAACTAGTAAATATTCATGTTATTCGAGAAAATA
TGACACACAGTGGGAAATCAAGTCGAAATACGAAAAAAAAATGTAGCAGAGTTGCCACATTTCAAGTGATTCCTGTAGTC
GGTCG-------TGGTGAAATAAAATTGAAGCCTTAATGCAACAGGTCTAACTAAAAAAAATGACTTGGTCCTATGAGAA
ATTAGACATCATATTTAATAGTTCACAATAGATAAACGTTAGTCACCTAAAAATCTGATTTGGGTCGGTCGATTTTCTAA
ATCGACAGAAGAAAGGAGGTGCCGGAGTGAAGGAAGAAACATCTGCAGTCCGGTGGGGGGCTCGCCGGAGAAGTTTCCCC
ATGATCTATATTAGGGTGGGGGTGGGGTCGGAAGAACGTCGGGTCAGTCGTCTTATAGGAAACAAATCCCCAAAATTCTA
GGGTATAAATCCCGTAAATGATGCTTCAATTGTTTTTTTTTTCACGAATATGCAAAGCTTGCGTATCATTCATTGATTAA
AAGGGAAGAGTG-AATACAGGGTATGGAACAACACATGCATAGACGACATAGTGCCCGGAGCAGAGGGACACGGGGTGCT
CAGCCCAAGGAAAGGAAAAGAACAACACGGCAAAACTCTCCTAGCCTTGAGAAACAACTAGAACACAATGAGGCCAACCA
GTATCCAACTCCACTCTCAGGGACGCCGCG-GCGAACAAGACACCACCTTCAAGAAGGGGAACGGCGTCAAGATGCCGCC
GTCGTCCGGTCCAGGAGCCCGGACCAAGGGTTTCCT-TGATGCTTCGATTGTAGGTGACAAAACTACAACGTACTCCCTA
ATCGTTTCTATAGCATAACACATACGCTTCGTCTTGATGTCCGTATTGGAGAGCTCCGTATTGAATTGGACTGGATTCCA
ATTCGATGAGGAAACTGAAATGGCACTAAT
>chr7B_8
AAAATAT-------CAAAGAATTGTGCCGTATAAGAGGCCGTGGAGTATTGCCCATTGCTTGTGTGTGCTTCCACACAAT
GTCATCTTCGG-----------------------TGAATGGTTGTCTAAAGGACCAAAATTGATGGGTGTGCTCTAAACT
GAAGTTGGCGGATGTCTTGACCTTGGAGACCCAAGCATTCTCGAAGAGAGCTTTCTTTGACATTTACTTTTGACTTAGAT
TTCCTCTGGAAACTATGTACTCAGGGTCGTCCATGGAGCCCGGACTTTTGAAAAATTCAAAAACCAATTCTGAGGTTTCA
AAAAATTCTGAAAAAA--TACACACGTGCATATAGATGTGTACCACTTTTTGTAAATTTCATGATGAATACATTTTTGAG
TGAGCTACACAAAGAGAACAAAATCATACATTT------------------ACTATTGCATCTGTACCAAAATGCAAGAC
CTTTTTGAGTTTTGCATAGGGGATAAAAAATATTGTACATTTTGTAACAAAAGGAATATAAAAGTCGATGATATATTTTT
TTTGATATAGCTCACACAAAAATGAGTTTCATCATCAACATTTACAGGATTGTGGTATACACGTGTACTTTTTAGAATTA
CTCCATCTGTAAC-TTTTTATAAAACGTTTTTAGAGTCAAAAACA--TCTTATAAAAAGTTACAGAGGGAGTATTTGATA
AGAAACCTCATTTAGAAAGAAAAAATGGGGCTCCATGGGGCTCGGGAGCAAGAAATCCTCTCCTATAAAACCCTCCTCGT
GGAACATGACAAGCGGGGCAGACAAATATTTTGACCAAGGTTGCGGTTCTAAGCTTGCATCCTACGTAGATAAGATAAGA
TAATTAACATACTGGCAGTCAAACGGAAGGGGTGGGGGACGGGGGAATATATATATGCGTGGCCATTATTTCAGGCAAAG
ATATTTTGTAGCGACTTGAAGAGCGAAGCCGGCCGGAAGAGCAACATGGAGCCGGTCGTGAAGGTGTACGGGCCAGCCAT
GTCTTGGAACATAGCCAGGGTCCTTGTGAGCCTGGAAGAGTCCGGCGTCAAGTACGAGCTCGTCGCCGTCGACTTCGCCG
CGGCCGAGCACAAGAGCGCCGCCCACCTCGCCAGGAACGTACGTAGGCCTCTCTCGCTCTTCTATTTGCCTATGAGACGA
CTATATCCTGCTCTGTTTCCCTTTTCCTGCGTTGGTATTGCTGATTAGCTCTTTTCACAGCCATTCGGTCAGGTCCCAGT
TTTGGAGGACGGTGACTTTTGCCTCTGGGGTAAGAAACTTCAGAAACCATCTACGCCCTCCGTTTCCAATATTGAACTAC
CAAAATGTCACATACGTATTTAGGAGCGGGGGAAGTAAATATTTTTCCTCTTTGCTAATGTTTAGCGATTCCCTTGGCCA
GGGTAGGCAGAGTAATTTAGCATGGATGCATAACTGGTATCCATTTACATAGTATTACTCAGATAAGCCTCGGGAGAAAA
CTTTCTACTGAAATTGAACATGTTTCCAGCCTAGCTCTCATCACATATATTGTCTATGCAACAGAGTCGCGCGCAATCAC
GAAATATATATGCCGAAAGTACAAACCTGAGCTCCTTGGGGTTGGCAATCTCAAGGGATCAGCAATGGTCGATGTGTGGC
TGGAGGTGGGGGCCCACCAATACTGGCCTCTCATAGAGGCTATTCTTATGGAGATCAGGATCCGGCCGATTTTCGGGCAA
AGGGTTGATGAGAGGGCCGTCGAGGAGAACATTGACAAGCTGAAGAAGGTGTTGGATGTGTATGAGTCCAGATTGTCTAG
CTCCAAGTACCTAGCAGGAGACTTCATCAGCGGATCAGCCTCGCCGACCTCAACCACGTCTCCACCATGCTTTGCCTAGG
GATCACTATATACACATCGGTGCTCGACATGTACCCGCATGTAAGGGCCTGGTGGGATGACCTGAAGGGCAGGCCAGCGG
CTAGGAAGGTGTCGGATCTAATGCACATGTCTGTGAAGAATGATCTAAAATGATTTTGTTGGCAACACCTAGCTCTTTCA
TTAATGTGTTTGTACTTTTTCGGTATTTGGTCAAGCTGTTTGTGTTGAACTAGTAAATATTCATGTTATTCGAGAAAATA
TGA-ACACAGTGGGAAATCAAGTCGAAATACGGAAAAAA-ATGTAGCAGAATTGCCACATTTCAAGTGATTCCTGTAGTC
TAGAGTCGGTCATGGTGAAATAAAATTGAAGCCTTAATGCAACTGGTCTAACT-AAAAAAATGACTTGGTCCTATGAGAA
ACTAGACATCATATTTAATAGTTCACACTAGCTAAACGTTAGTCGCCTGAAAATCTGATTTGGGCCGGTCGATTTTCTAA
AACAATAGAAGAAAGGAGCTGCCGGAGTGAAGGGAGAAACAGCTGCGGTCCGGTGGGGGGCTCGCCCGAGAAGCTTCCCC
ATGATCTATATTAGGGTGGGGGTGGGGGTGAAAGAACGTCGGGTCAGTCATCTTTTAGGAAACAAATCCCCAAAATTCTA
GGGTACAAATCCCGTAAATGATGCTTCGATTGTTTTTTTCGTA---AATACGCAAAGCTTGCGTATCATTCATTGATAGA
AGAAGAATGAATAAATACGGGGTATGGAACAACACATGCGCAGACGACATGGTGCCCGGAGCAGAGGGACACGAGGTGCT
CAACCCAAGGAAATGAAAAGAGCAACACGGCAAAACTCTCCTAGCCCTGAGAAACAACTCAAACACAATAAGGCCAACCA
GTATCCAACTCCACCGTCGGGGACGCCGCGAGCGAACAAGACAACACCTTCAAGAAGAGGAACGGCGTCAAGACGCCGCC
GTCGTCCGGTCCAGGAGCCCGGACCAAGGATTTCCCCTGATGCTTCGATTGTAGGTGACAAAACTGCAACGTACTCCCTG
ATCGTTTCTATACCATAACACATACGCTTCATCTTGATGTCCGTATTGGAGAGCTCCGTATTGAATTGGACTGGATTCCA
ATTCGATGAGGAAACTGAAATGGCACTAAT
>SNPs
-S-S--SSSSSSSS-------------------------------------------------------------S----
-----------SSSSSSSSSSSSSSSSSSSSSSS----------------------------------------------
-------------S---------------S--------------------------------------------------
--------S-------------------------------S--------------------------S------------
----------------SS---------------------S----------------------------------------
---------------------------------SSSSSSSSSSSSSSSSSS-----------------------S-----
----------------------------------S-------------S-------------------S-----S-----
------------------------------------S----------S--------------------------------
-------------S-----------------S-----------S-SS---------------------------------
--------S-----------------S--------S--------------------------S-----------------
---------------S----------------------------------------------------------------
-------------S---------------------S------------------------------S-------------
-----S--------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------S----------S--S---------S----------------------S---------------
----------------S-S---------S---------------------------------------------------
----S---------------------------------------------------------------------------
-------------S------------------------------------------------------------------
---S-------------------------------------------------------------S----S---------
------SS------------------S----------S------------------------------S-----------
----------------------------------------------------S---------------------------
---------S---------S---S-S---------------S--------------------------------------
--------------------S--------------------------------------------------------S--
---------------S-----S----------------------------------------------------------
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-S-----------------------------S-----------------------S------------------------
-----------------------------------S--------------------------------------------
---S----------------------------S------S----------S-----------------------------
SSSS---------------------------------------S---------S--------------------------
-S-------------------------S---S------------S---S---------------S---------------
-S-S-S------------S--------------S-------S----S-------------------S------S------
---------------------------SS-S------------------S----S-------------------------
-----S---------------------S-----------SS-SSSS----S--------------------------SS-
-SSS---SSSSS------S--------------------SS---------S----------------------S------
--S----------S-------S------------------------S------------SS--------S----------
--------------SS--S------------------------S-------------S---------------S------
-----------------------------S-----S-----------------------------S-------------S
------------S-----------------S-------------------------------------------------
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>forward_108
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--------CGGCATACTCATCTAGGCGG----------------------------------------------------
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>reverse_1162
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-----------------------------------------TGTAGGCCTCTCTCGCTCTT-------------------
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>forward_916
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----------------AGTCAAACGGAAGGGGTGGA--------------------------------------------
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>reverse_2419
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------------------GTGCCGGAGTGAAGGAAGAA------------------------------------------
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