>input_sequence_62530
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-------------------------GATGACCCGGCAGACAGCGGAAGGGAAGGCAACAGGGGGATCTTTCTTTCTCTCA
AAAAAAGAAAGGAAAAAAGGGCAACGGGAGGATCGAGAAGGGGCGAGGGTGGTTGTTTGGACGGAGTTGGGGACTATC--
GATCGATCGATCGGAGG---------------CGGGGCGGCGGGATGACGCGGGGGAAGCAGAAGATCGACGCGCAGCGG
AAGAGCGCGGAGAAGAACCAGAAGTCCAAGGGGTCGCAGCTCGAGGCCCGCGCCGTCGGCCTCAAGGTCGTCTGCCCCAT
CTGCAAGGTCAGCGCACGCGCTCTCTTCTTCT------TCTTCCTAATCCCTATCTAGGCACGGCACGGATCTGAAGCCC
CAGTCAGGGTCTCCATCCGATCCGATCCGATCCCATGCGCGTTGTCATGTTCCCC--TTGGGCTAGTAGTAATTCTG---
---------------------GGGCAGAGTAGATGATGGCTAGTAGCCGATCTGAATCCTGCAACCAGCATGATAAGATC
ATACGAATCAAGTTAGAAAACTGTGTGCAAGCATAACCGGATATACTCCTGCTAGCTGGTGTATAATTAGCTTTACATGG
ATGCAT----GTTCCTCGTGATTGATGCAGTGTCAACTTCATGTATATAATAAT-ATTACCTATATATGTGTGTGCAGTC
TCAACTGGCCAACGAGAAGCAGTTGATTGATCACTATGGATCAAAGCATCCCAAGGAGAAACCTCCAGGTCCATCAAATG
CAGAGTGACTGATGCGAGGCGGAAGCATGAGCTATACTTTGACTGTTTCTGAGGGTTTTTCAATCTGCTCCACACTCGGA
CGACTTGAGCCTCAGCTTTACCCTATGTAATGCATGCATTTCCCCTTGTTCCAGGCAAGAACC-T--TGATGAGCATGTA
TTTGCCTTATATGAGTATC-TTGTCAAACTGTCAGCATACCTTCAAACTGTATGTGGTACAATCTTTGGATAAGAGAATG
CTAAACTTTC--CGATTATGGCATTCTCCTGTTGCGTGATTTGCTGTCTAGAGAGCTGAAAAATGAATGTTTTTTCGTTC
A-------------------------------------------------------------------------------
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>chr6A_1_TraesCS6A01G218400
TCAGAAAATGGTCGGGAAATCAAAATGTTCACAATTTTTT-TAAAAATGTTTGCATGTCATAAAAAAAATTCTCGATTTC
AAAAAATATGTTCACGAAATAAAATAATATTCATGATTCTTAGAAAATGCTTGTGTATTCAACACACTTTCGGGAATTGG
AAAAAATGACCATGAAATTTTCGAAAAGGATCACAAAAATTCAATCAAATCTATTGAAACAGATACGTAAATAACGAACA
AACCAAACCATCGCTTACATAAAATTTTTGAGGGGATCTGGAGAGGTTGTTTTATTATTTTATTTAGTCCATCGCACATT
GGGT-AA-AAA--AGGTTTC-TGTGTTCTTTACAACATTGAGCCCAAAACAATTGACACATTTTCCAGTGGTTTTGTTTT
TGTAAGCTATATGAAA-TGACTAAATGTCTAATTTGCTATCATACATATCTATATTTATTGTGGTACTATATTTTCACTG
GTCATGAAAAACACCATGACGCCGG-----------------GTCAAGGCGGGACACATCATTCATCAGTCTACGTTAGG
CAGGGTCTATCAATACAGTTTCCACAACCAAAAAACATTTCATTGTGACGCCTTAGG-AAATAAAGTCATAATGAGACCA
TCACATTTTTTG-TTTTTGAAATGACTTTTAAAAAGTTTCTTATCTCATCATGACATGATTTTGACGTACTTTGTGAAGT
GACATTTTAAAAGTCCGTATCTCATCCTGGCATAATTTGCATAATCTTAT--TATTTTTCTCCCGTGACAACGCATGGGC
CTATTTGCTAGTTGTACTAAAATTAATTCAAAGTTGAGACACTTATTTTAGGACGGATGTCATGGAATAACGAAATTCTT
CTATTACTCACATTCGAAGAACCCATTTAAAAAAGTTGAGGAA-------------------------------------
GAGAACCCAAAAATTTGTAAGCCCTGTGGTTGGATATGGTGGCGAATGGAGGGGGAACGGCCCACCCACAGCCCACAGGA
ACATGAGTCGCGTAGATAGGCCCGCGATGACCCGGCAGACAGCGGAAGGGAAGGCAACAGGGGGATCTTTCTTTCTCTCA
AAAAAAGAAAGGAAAAAAGGGCAACGGGAGGATCGAGAAGGGGCGAGGGTGGTTGTTTGGACGGAGTTGGGGACTATC--
GATCGATCGATCGGAGG---------------CGGGGCGGCGGGATGACGCGGGGGAAGCAGAAGATCGACGCGCAGCGG
AAGAGCGCGGAGAAGAACCAGAAGTCCAAGGGGTCGCAGCTCGAGGCCCGCGCCGTCGGCCTCAAGGTCGTCTGCCCCAT
CTGCAAGGTCAGCGCACGCGCTCTCTTCTTCT------TCTTCCTAATCCCTATCTAGGCACGGCACGGATCTGAAGCCC
CAGTCAGGGTCTCCATCCGATCCGATCCGATCCCATGCGCGTTGTCATGTTCCCC--TTGGGCTAGTAGTAATTCTG---
---------------------GGGCAGAGTAGATGATGGCTAGTAGCCGATCTGAATCCTGCAACCAGCATGATAAGATC
ATACGAATCAAGTTAGAAAACTGTGTGCAAGCATAACCGGATATACTCCTGCTAGCTGGTGTATAATTAGCTTTACATGG
ATGCAT----GTTCCTCGTGATTGATGCAGTGTCAACTTCATGTATATAATAAT-ATTACCTATATATGTGTGTGCAGTC
TCAACTGGCCAACGAGAAGCAGTTGATTGATCACTATGGATCAAAGCATCCCAAGGAGAAACCTCCAGGTCCATCAAATG
CAGAGTGACTGATGCGAGGCGGAAGCATGAGCTATACTTTGACTGTTTCTGAGGGTTTTTCAATCTGCTCCACACTCGGA
CGACTTGAGCCTCAGCTTTACCCTATGTAATGCATGCATTTCCCCTTGTTCCAGGCAAGAACC-T--TGATGAGCATGTA
TTTGCCTTATATGAGTATC-TTGTCAAACTGTCAGCATACCTTCAAACTGTATGTGGTACAATCTTTGGATAAGAGAATG
CTAAACTTTC--CGATTATGGCATTCTCCTGTTGCGTGATTTGCTGTCTAGAGAGCTGAAAAATGAATGTTTTTTCGTTC
A---------------TGTGTGTGTGGTATATACAGCATCCGAAAAAAGAATTGTTCTGGTTGTTCGAAACAAAAAGCAA
GTCCTGAAGGGAAGTCATGACATACAAACTTTTTTTGGGGGTGATGACATACAAACTGAACATAAGATAAAAAAGCACCA
CAGAAACAGGAATGATGTGTTACATCCCAAATCAGGGTACTACCAT-ATTGCTATGGGTTTTCAAATTCTAAACAAGACT
TCAAAGTACGGTAAATTGCTCCTTTTTTTGGTTGTTGCACGCATTTGAGGCAATTCTATTGACTTGCTGTGTCCCCGGAG
CTGCATCATGATGAGAATCATCCAAATCACAGACGGTCTCCGGTGTACTTCACTATGATTGACAACGGCATGTGTTTACC
TCTACCGCCTTAGACGGTGGTGTATCAAATCCATGCATTTCTTCAATAGGAGGTAAGTTTTTGACATCTTCAGCTTTAGT
ACCTTTTTTCTTCATACATTTCGCTGCCTCTTGCATATCTTCTGGACTAAGATATAAGATACCCCTCTTCTTCGGAGTGG
GTTTAGGAGGTGATTCAGGAAGAGTCCAATTATCATAATTTTTTTAATATGTTATCCAATAATTCCTTAGCTTGTTCAAC
GGTTCGTTCCTTGAAAACACAACCAGCACAACTATCTAGGAAATCCTTAAAAGCATCAGTTAGTCCATTATAGAAGATAT
CAAGTATTTCATTTTTCCTTAAGAGGATNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCTCTCTTCTTC
AATTTGCACAAAGCTAAATATTTCCTGTAAGGCAGCTTGTTTATTACGAGCAGGGAA
>chr6A_1
TCAGAAAATGGTCGGGAAATCAAAATGTTCGCAATTTTTTTTAAAAATATTTGCCTGTCAC-AAAAAAATTCTCGATTTC
AAAAAATATGTTCACCAAATAAAATAATGTTCCTGATTCTTAGAAAATGCTTGTTTATTCAACACGCTTTCGGGAATTGG
AAAAAATGACCATGATATTTTCGAAAAGGATCACAAAAATTCAATCAGATCTATTGAAACAAATACGTAAATAACGAACA
AAACAAACCGTGGCTTGCATAAACTTTTTGAGGGGGTATGGAG-GGTTGTTTTATTATTTTATTTAGTCCATTGCACATC
GGGTAAA-AAA--AGGTTTC-TGTGTTCTTTACAACGTTGAGCCCAAAAAAATTGACACATTTTCCAATGGTTTTGTTTT
TGTAAACTATATGAAA-TGACTAAATGTCTAATTTGCTTTCATACATATCTATATTAATTGTGGTACTATAGTTTCATTG
GTCGTGAAAAACACCATGACGCTAG-----------------ATCAAGGTGAGACACATCATTCATCAGTCTACCTTAGG
CAGGGTCTATCAATACAGTTTCCTCAACCAAAAAACATTTCGTTGTGACGCCTTAGG-AAATAAAGTCGTCATGAGACCA
TCACATTTTTTG-TTTTTGAAATGACTTTTAAAAAGTCTCTTATCACACCATGACATGATTTTAACGTACTTTATGAAGT
GGCATTTTAAAAGCCCATATCTCATACTGGCAGAATTTGCATAATCTT-------TTTTTTCCGGTGGCAACGCACGGAC
CTATTTGCTAGT--------------------------------------------------------------------
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>chr6A_1
TCAGAAAATGGTCGGGAAATCAAAATGTTCGCAATTTTT-AGAAAATTGTTTGCATGTCAT-AAAGAAATTCTCGATTTC
TAAAAATATGTTCATGAAATAAAATAATGTTCATGATTCTTAGAAAATGCTTGTGTATTCAACACGCTTTTGGGAACTGG
AAAAAATGACCATGAAATTTTAGAAAAGGATCAAAAAAATTCAAACAGATCCATTGAAACAGATATGTAAATAACGAACA
AAACAAACCATA----------------------GATCCGGAGAAGTTATTTTATTATTTTATTTAGTTCATCGCACACC
GGGTAAA-AAA--AGGATTTATGTGTTCTTTACAACGTTGATCCCCAAAAAAATGACACATTTTTCAATGGGTTAGTTTT
TGTAAGCTATATGAAA-TGACTAAATGTCTAATTTACTTCCATACATATCTATGTTTATTGTGGTACTATAGTTTTACAG
GTCATGAAAAACACCACGACGCTAG-----------------CTAAAGTCGAGACACATCATTCATCATTCTACCTTAGG
CAGGATCTATCAATACAGTTTGCTCAGCCAAAAAACATTTTGTTGTGACGCCTTAGG-AAATAAAGTCGTCATGAGACCA
TCACATTTTCAG-TTTTTGAAATGACTTTTTAAAAGTCTCTTATCTCATCATGACATGATTTTGATGTACTTTATGAAGT
GATATTTTAAAAGTCTGTATCTCATCCTTGCATAATTTGCATAATCTGAT-TTATTTTTCTCCCGTGGCAACGCACGGGC
CTATTTGCTAGT--------------------------------------------------------------------
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>chr6A_1
TCAGAAAATGGTCGGGAAATCAAAATGTTCGCAATTTTT-AGAAAATTGTTTGCATGTCAT-AAAGAAATTCTCGATTTC
TAAAAATATGTTCATGAAATAAAATAACGTTCATGATTCTCAGAAAATGCTTGTGTATTCAACACACTTTTGGGAACCGG
AAAAAATGACCATGAAATTTTAGAAAAGGATCAAAAAAATTCAAACAGATCCATTGAAACAGATATGTAAATAACGAACA
AAACAAACCATA----------------------GATCCGGAGAAGTTATTTTATTATTTTATTTAGTTCATCGCACACC
GGGTAAA-AAA--AGGATTTATGTGTTCTTTACAATGTTGATCCCCAAAAAAATGACACATTTTTCAATGGGTTAGTTTT
TGTAAGCTATATGAAA-TGACTAAATGTCTAATTTACTTCCATACATATCTATGTTTATTGTGGTA-TATAGTTTTACAG
GTCATGAAAAACACCACGACGCTAG-----------------CTAAAGTCGAGACATATCATTCATCATTCTACCTTAGG
CAGGATCTATCAATACAGTTTGCTCAGCCAAAAAACATTTTGTTGTGACGCCTTAGG-AAATAAAGTCGTCATGAGACCA
TCACATTTTCAG-TTTTTGAAATGACTTTTTAAAAGTCTCTTATCTCATCATGACATGATTTTGATGTACTTTATGAAGT
GATATTTTAAAAGTCTGTATCTCATCCTTGCATAATTTGCATAATCTGAT-TTATTTTTCTCCCGTGGCAACGCACGGGC
CTATTTGCTAGT--------------------------------------------------------------------
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>chr6A_1
TCAGAAAATGGTCGGGAAATCAAAATGTTCGCAATTTTT-AGAAAATTGTTTGCATGTCAT-AAAGAAATTCTCGATTTC
TAAAAATATGTTCATGAAATAAAATAATGTTCATGATTTTTAGAAAATGCTTGTGTATTCAACACGCTTTTGGGAACTGG
AGAAAATGACCATGAAATTTTAGAAAAGGATCAAAAAAAATCAAACAGATCCATTGAAACAGATATGTAAATAACGAACA
AAACAAACCATA----------------------GATCCGGAGAAGTTATTTTATTATTTTATTTAGTTCATCGCACACC
GGGTAAA-AAA--AGGATTTATGTGTTCTTTACAACGTTGATCCCCAAAAAAATGACACATTTTTCAATGGGTTAGTTTT
TGTAAGCTATATGAAA-TGACTAAATGTCTAATTTACTTCCATACATATCTATGTTTATTGTGGTACTATAGTTTTACAG
GTCATGAAAAACACCACGACGCTAG-----------------CTAAAGTCGAGACACATCATTCATCATTCTACCTTAGG
CAGGATCTATCAATACAGTTTGCTCAGCCAAAAAACATTTTGGTGTGACGCCTTAGG-AAATAAAGTCGTCATGAGACCA
TCACATTTTCAG-TTTTTGAAATGACTTTTTAAAAGTCTCTTATCTCATCATGACATGATTTTGATGTACTTTATGAAGT
GATATTTTAAAAGTCTGTATCTCATCCTTGTATAATTTGCATAATTTGAT-TTATTTTTCTCCCGTGGCAACTCACGGGC
CTATTTGCTAGTTATA----------------------------------------------------------------
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>chr7A_1
TCAGAAAATGGTCGGGAAATCAAAATGTTCGCAATTTTTTTAAAAAATGTTTGCCTATCAT-AAAAAAATTCTCGATTTC
AAAAAATATGTTCACCAAATAAAATAATGTTCCTGATTCTTAGAAAATGCTTGTGTATTCAACACGCTTTCGGGAATTGG
AAAAAATGACCATGAAATTTTCGAAAAGGATCATAAAAATTCAATCAGATCTATTGAAACAAATACGTAAATAACGAACA
AAACAAACCATGGCTTGCATAAACTTTTTGAGGGGATCTGGAGAGGTTGTTTTATTATTTTATTTAGTCCATTGCACATC
GGGT-AA-AAA--AGGTTTC-TGTGTTCTTTACAACGTTGAGCCCAAAAAAATTGACACATTTTCCAATGGTTTTGTTTT
TGTAAGCTATATGAAA-TGACTAAATGTCTAATTTGCTTTCATACATATCTATATTTACTGTGGTACTATAGTTTCATTG
GTCATGAAAAACACCATGACGCTGG-----------------ATCAAGGCGAGACACATCATTCATCAGTCTACCTTAGG
CAGGGTCTATCAATACAGTTTCCTCAACCAAAAAACATTTCGTTGTGACGCCTTAGG-AAATAAAGTCGTCATGAGACCA
TCACATTTTTTG-TTTTTGAAATGACTTTTAAAAAGTCTCTTATCTCACCATGACATGATTTTAACGTACTTTATGAAGT
GGCATTTTAAAAGCCCGTATCTCATACTGGCAGAATTTATATAATCTTT-----TTTTTCTCCCGTGGCAACGCATGGGC
CTATTTGCTAGT--------------------------------------------------------------------
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>chr7A_1
TCAGAAAATGGTCGGGAAATCAAAATGTTCGCAATTTTTTAAAAAAATGTTTGCCTGTCAT-AGAAAAATTCTCGATTTC
AAAAAATATGTTCACCAAATAAAATAATGTTCCTGATTCTTAGAAAATGCTTGTGTATTCAACACGCTTTCGGGAATTGG
AAAAAATGACCATGAAATTTTCGAAAAGGATCACAAAAATTCAATTAGATCTATTGAAACAAATACGTAAATAACAAACA
AAACAAACCATGGCTTGCATAAACTTTTTGAGGGGATCTGGAGAGGTTGTTTTATTATTTTATTTAGTCCATTGCACATC
GGGT-AAAAAA--AGGTTTC-TGTGTTCTTTACAACGTTGAGCCCAAAAAAATTGACACATTTTCCAATGGTTTTGTTTT
TGTAAGCTATATGAAA-TGACTAAATGTCTAATTTGCTTTCATACATATCTATATTTATTGTGGTACTATAGTTTCATTG
GTCATGAAAAACACCATGACGCTAG-----------------ATCAAGGCGAGACACATCATTCATCAGTCTACCTTAGA
CAGGGTCTATCAATACAATTTCCTCAACCAAAAAACATTTCGTTGTGACGCCTTAGG-AAATAAAGTCGTCATGAGACCA
TCACATTTTTTG-TTTTTGAAATGACTTTTAAAAAGTCTCTTATCTCACCATGACATGATTTTAACGTACTTTATGAAGT
GGCATTTTAAAAGCCCGTATCTCAT-------------------------------------------------------
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>chr5A_1
TCAGAAAATGGTCGGGAAATCAAAATGTTCGCAATTTTT-AAAAAAATGTTTGCATGTCAT-AAAAAAATTCTCAATTTC
AAAAAATATGTTCTTGAAATAAAATAATGTTCATGATTCTTAGAAAATGCTTGTGTATTCAACACGCTTTCGGGAATTGG
AAAAAATGACCATGAAATTTTTGAAAAGGATCACAAAAATTCAATCAGATCTATTGAAACAGATACGTAAATAACGAACA
AAACAAACCATCGCTTACATGAACTTTTTGAGGGGATCTGGAGAGGTTGTTTTATTATTTTATTTAGTCCATCGCACATC
GGGTA-A-AAAAAAGGTTTC-TATGTTCTTTACAACGTTGAGCCCCAAAAAATTGACACATTTTCCTGTGATTTTGTTTT
TGTAAGCTATATGAAA-TGATTAAATGTCTAATTTGCTTTCATACATATCTATATTTATTGTGGTACTATAGTTTTACTG
GTCATGAAAAACACCGTGACGCTAG-----------------GTCAAGGCGAGACACATCATTCATCAGTTTACCTTAGA
CAAGGTCTATCAATAAAATTTCCTCAATCAAAAAACATTTTGTTATGACGCCTTAGGAAAATAAAATCGTCATGAGACCA
TCACATTTTTAG-TTTTTGAAATGACTTTTAAAAAGTCTCTTCTCTCATCATGACATGATTTTGACGTATTTTATGAAGT
GACATTTTAAAAGCCCGTATCTCATCGTAGCATAATTTGCATAATCTTAT-T-CTTTTTCTCCTGTGGCAACGCACGGGC
-TATTTGCTAGT--------------------------------------------------------------------
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>chr4B_1
TCAGAAAATGGTCGGGAAATCAAAACATTTACAATTTTTTAAAAAATTGTTTGCATATCAT-GAAAAAAATCTCGATTTC
AAAAAATATGTTCACGAAATAAAATAATGTTCATGGTTCTTAGAAAATCCTTGTGTATTCAACACGCTTTCGGTAATTGG
AAAAAATGACCATGAAATTTTAGAAAAGGATCACAAAAAT-CAAACAGATCCATTGACACAGATACGTAAATAACGAATA
AAACAAACCAACGCTTACATAAACATTTTGAGCGGATCTAGAGAGGTTGTTTTATTATT-TATTTAGTCCATCGCACATC
GGGTAAA-AAA--AGGTTTC-TGTGTTCTTTACAACGTTGAGCCCAAAAAAATTGACACATTTTCCAA-GGGTTAGTTTT
TGTAAGCTATATGAAA-TGACTAAATGTCTAATTTACTTATGTACATATCTATGTTTATTGTGATATTATAGTGTTACTG
GTCATGAAAAGCACCACGACGCTAG-----------------GTCAAGGCGAGACACATCATTCATCAGTCTACCTTAGG
CAGGGTCTACCAATACAGTTTCCTCAGCCAAAAAACATTTCATCGTGACGCCTTAGG-AAATAAAGTCGTCATGAGACAA
TCACATTTTCAG-TTTTTGAGATGACTTTTTAAAAGTCTTTTATCTCATCATGACATGATTTTGACGTACTTTATGAAGT
GACATTTTAAAAGTCTGTATCTCATCCTGGTATAATTTGCATAATTTGAT-T-CTTTTTCT-------------------
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>chr4B_1
TCAGAAAATGGTCGGGAAATCAAAATGTTCGCAATTTTT-AGAAAATTGTTTGCATGTCAT-AAAGAAATTCTCGATTTC
TAAAAATATGTTCATGAAATAAAATAATGTTCATGATTCTTAGAAAATGCTTGTGTATTCAACACGCTTTTGGGAACTGG
AGAAAATGACCATGAAATTTTAGAAAAGGATCAAAAAAATTCAAACAGATCCATTGAAACAGATATGTAAATAACGAACA
AAACAAACCATA----------------------GATCCGGAGAAGTTATTTTATTATTTTATTTAGTTCATCGCACACC
GGGTAAA-AAA--AGGATTTATGTGTTCTTTACAATGTTGATCCCCAAAAAAATGACACATTTTTCAATGGGTTAGTTTT
TGTAAGCTATATGAAA-TGACTAAATGTCTAATTTACTTCCATACATATCTATGTTTATTGTGGTACTATAGTTTTACAG
GTCATGAAAAACACCACGACGCTAG-----------------CTAAAGTCGAGACACATCATTCATCATTCTACCTTAGG
CAGGATCTATCAATACAGTTTGCTCAGCCAAAAAACATTTTGTTGTGACGCCTTAGG-AAATAAAGTCGTCATGAGACCA
TCACATTTTCAG-TTTTTGAAATGACTTTTTAAAAGTCTCTTATCTCATCATGACATGATTTTGATGTACTTTATGAAGT
GATATTTTAAAAGTCTGTATCTCATCCTTGCATAATTTGCATAATCTGAT-TTATTTTTCTCCCGTGGCAACGCACGGGC
CTATTTGCTAGTT-------------------------------------------------------------------
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>chr3A_1
TCAGAAAATGGTCGGGAAATCAAAATGTTCACAATTTTT-A-AAAATTGTTTGCATATCAT--AAAAAATTCTCGAATTC
AAAAAATATGTTCACAAAATAAAATTATGTTCATGATTCTTAGAAAATGCTTGTGTATTCAACATGCTTTCGGGAATTGG
GAAAAATGACCAGGAAATTTTAGAAAAGGATCACAAAAATTCAAACGGATCCATTGAAACAGATACGTAAATAACGAACA
AAAGAAACCATTGCTTACATAAACTTTTTGTTGGGATTTGGAGAGGATTTTTTATTATTTTATTTAGTTCATCACACATA
GTGTA-A-AA-AAAGGTTTC-TATGTTCTTTACAACATTGAGCCCCAAAAAAATGACACATTTTCCAATGGGTTAGTTTT
TGTAAGCTATATGAAA-TGACTAAATGTCTAATTGGCTTTCATACATATCTATTTTTATTCTGGTACTATAGTTTTACTG
GTCATGAAAAACACCACGATGCTAG-----------------GTCAAGGCGAGACACATCATTCATCAGTCTACCTTAGG
CAGGGTCTATCAATACAGTTTCCTCAGCTA-TTTTT-TTTCCTTGTGACGCCTTAGG-AAATAAAGTCGTCATGAGACCA
TCACATTTTCAG-TTTTCGAAATGAGTTTCTAAAAGTCTCTTATCTCATCATGACATGATTTTGACATACTTTATGAAGT
GACATTTTAAAAGTCAGTATCTCATCCTGGCATAATTTGCATATAATCTGATTCTTTTTCTCCTGTGACAACGCACGGGC
CTATTTGC------------------------------------------------------------------------
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>chr1A_1
TCAGAAAATGGTCGGGAAATCAAAATGTTCGCAATTTTT-AGAAAATTGTTTGCATGTCAT-AAAGAAATTCTCGATTTC
TAAAAATATTTTCATGAAATAAAATAATGTTCATGATTCTTAGAAAATGCTTGTGTATTCAACACGCTTTTGGGAACTGG
AAAAAATGACCATGAAATTTTAGAAAAGGATCAAAAAAATTCAAACAGATCCATTGAAACAGATATGTAAATAACGAACA
AAACAAACCATA----------------------GATCCGGAGAAGTTATTTTATTATTTTATTTAGTTCATCGCACACC
GGGTA-A-AAA--AGGATTTATGTGTTCTTTACAACGTTGATCCCCAAAAAAATGACACATTTTTCAATGGGTTAGTTTT
TGTAAGCTATATGAAA-TGACTAAATGTCTAATTTACTTCCATACATATCTATGTTTATTGTGGTACTATAGTTTTACAG
GTCATGAAAAACACCACGACGCTAG-----------------CTAAAGTCGAGACACATCATTCATCATTCTACCTTAGG
CAGGATCTATCAATACAGTTTGCTCAGCCAAAAAACATTTTGTTGTGACGCCTTAGG-AAATAAAGTCGTCATGAGACCA
TCACATTTTCAG-TTTTTGAAATGACTTTTTAAAAGTCTCTTATCTCATCATGACATGATTTTGATGTACTTTATGAAGT
GATATTTTAAAAGTCTGTATCTCATCCTTGCATAATTTGCATAATCTGAT-TTATTTTTCTCCCGTGGCAACGCACGGGC
CTATTTGCTAGT--------------------------------------------------------------------
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>chr1A_1
TCAAAAAATGGTCGGGAAATCAAAATGTTTGCAATTTTT-AGAAAATTGTTTGCATGTCAT-AAAGAAATTCTCGATTTC
TAAAAATATGTTCATGAAATAAAATAATGTTCATGATTCTTAGAAAATGCTTGTGTATTCAACACGCTTTTGGGAACTGG
AAAAAATGACCATGAAATTTTAAAAAAGGATCAAAAAAATTCAAACAGATCCATTGAAACAGATATGTAAATAACGAACA
AAACATACCATA----------------------GATCCGGAGAAGTTATTTTATTATTTTATTTAGTTCGTCGCACATC
GGGTAAA-AAA--AGGATTTATGTGTTCTTTACAACGTTGATCCCTAAAACAATGACACATTTTTCAATGGGTTAGTTTT
TGTAAGCTATATGAAA-TGACTAAATGTCTAATTTACTTCCATACATATCTATGTTTATTGTGGTATTATAGTTTTACAG
GTCATGAAAAACACCACGACGCTAG-----------------CTAAAGTCGAGACACATCATTCATTATTCTACCTTAGG
CAGGATCTATCAATACAGTTTGCTCAGCCAAAAAACATTTTGTTGTGACGCCTTAGG-AAATAAAGTCGTCATGAGACCA
TCACATTTTCAC-TTTTTGAAATGACTTTTTAAAAGTCTCTTATCTCATCATGACATGATTTTGATGTACTTTATGAAGT
GATATTTTAAAAGTCTGTATCTCATCCTTGCATAATTTGCATAATCTAAT-TTATTTTTCTCCCGCGGCAACGCACGGGC
CTATTTGCTAGTA-------------------------------------------------------------------
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>chr4A_1
TCAGAAAATGGTCGGGAAATCAAAATGTTCGCAATTTTT-AGAAAATTGTTTGCATGTCAT-AAAGAAATTCTCGATTTC
TAAAAATATGTTCATGAAATAAAATAATGTTCATGATTCTTAGAAAATGCTTGTGTATTCAACACGCTTTTGGGAACTGG
AAAAAATGACCATGAAATTTTAGAAAAGGATAAAAAAAATTCAAACAGATCCATTGAAACAGATATGTAAATAACGAACA
AAACAAACCATA----------------------GATCCGGAGAAGTTATTTTATTATTTTATTTAGTTCATCGCACACC
GGGTAAA-AAA--AGGATTTATGTGTTCTTTACAACGTTGATCCCCAAAAAAATGACACATTTTTCAATGGGTTAGTTTT
TGTAAGCTATATGAAA-TGACTAAATGTCTAATTTACTTCCATACATATCTATGTTTATTGTGGTACTATAGTTTTACAG
GTCATGAAAAACACCACGACGCTAG-----------------CTAAAGTCGAGACACATCATTCATCATTCTACCTTAGG
CAGGATCTATCAATACAGTTTGCTCAGCCAAAAAACATTTTGTTGTGACGCCTTAGG-AAATAAAGTCGTCATGAGACCA
TCACATTTTCAG-TTTTTGAAATGACTTTTTAAAAGTCTCTTATCTCATCATGACATGATTTTGATGTACTTTATGAAGT
GATATTTTAAAAGTCTGTATCTCATCCTTGCATAATTTGCATAATCTGAT-TTATTTTTCTCCCGTGGCAACGCACGGGC
CTATTTGCTAGT--------------------------------------------------------------------
--------------------------------------------------------------------------------
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---------------------------------------------------------
>chr5B_1
TCAGAAAATGGTCGGGAAATCAAAATGTTCGCAATTTTT-AGAAAATTGTTTGCATGTCAT-AAAGAAATTCTCGATTTC
TAAAAATATGTTCATGAAATAAAATAACGTTCATGATTCTTAGAAAATGCTTGTGTATTCAACATGCTTTTGGGAACTGG
AAAAAATGACCATGAAATTTTAGAAAAGGATCAAAAAAATTCAAACAGATCCATTGAAACAGATATGTAAATAACGAACA
AAACAAACCATA----------------------GATCCGGAGAAGTTATTTTATTATTTTATTTAGTTCATCGCACGCC
GGGTAAA-AAA--AGGATTTATGTGTTCTTTACAACGTTGATCCCCAAAAAAATGACACATTTTTCAATGGGTTAGTTTT
TGTAAGCTATATGAAA-TGACTAAATGTCTAATTTACTTCCATACATATCTATGTTTATTGTGGTA-TATAGTTTTACAG
GTCATGAAAAACACCACGACGCTAG-----------------CTAAAGTCGAGACACATCATTCATCATTCTACCTTAGG
CAGGATCTATCAATACAGTTTGCTCAGCCAAAAAACATTTTGTTGTGACGCCTTAGG-AAATAAAGTCGTCATGAGACCA
TCACATTTTCAG-TTTTTGAAATGACTTTTTAAAAGTCTCTTATCTCATCATGACATGATTTTGATGTACTTTATGAAGG
GATATTTTAAAAGTCTGTATCTCATCCTTGCATAATTTGCATAATCTGAT-TTATTTTTCTCCCGTGGCAACGCACGGGC
CTATTTGCTAGT--------------------------------------------------------------------
--------------------------------------------------------------------------------
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---------------------------------------------------------
>chr1B_105
--------------------------------------------------------------------------------
-------------------------AATGTTCATGATTCTTAT-AAATGCTTGTGTATTCAACACGCTTTTGGGAATTGG
AAAAAATGACCATGAAATTTTTGAAAAGGGTCACTAAAAT-CAAACGGATCCATTGAAACATATACATCAATAACGAACA
AAACAAACCATCGCTTACATAAACTTTTTGAGGGGATCTGGAGAGGTTGTTTTATTATTTTATTTAGTCCATCACACATT
GGGTAAA-AAA--AAGGTTTTTGTGTTCTTTACAACGTTGAGCCCAAAAAAAGTGACACATTTTTCAA-AGATTAGTTTT
TGTAAGCTATATGAAA-TGACTAAATGTCTAATTTGCTTCCATACATATCTATGTTTATCGTGGCACTATAGTTTTATTG
GTCATGAAAAACACCACGACGCTAG-----------------GTCAAGGCGAGACACATCATTCATCAGTCTACCTTAGA
CAGGGTCTATCAATACAGTTTCCTCAGCCAAAAAACATTTCGTCGCGACGCCTTAGG-AAATAAAGTCGTCATGAGACCA
TCACATTTTCGTTTTTTTGAAATGACTTTTTAAAAGTCTCTTATCTCATCATGACATGATTTTGACGTACTTTATGAAGT
GATATTTTAAAAGTCCGTATCTCATCCTGGCATAATTTGCATAATCTGAT-T-ATTTT---CCCATGGCAACGCACGGAC
CTATGTGTCTAG--------------------------------------------------------------------
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---------------------------------------------------------
>chr1B_105
--------------------------------------------------------------------------------
-------------------------AATGTTCATGATTCTTAT-AAATGCTTGTGTATTCAACACGCTTTCGGGAATTGG
AAAAAATGACCATGAAATTTTAGAAAAGGGTCACTAAAAT-CGAACGGATCCATTGAAACATATACATCAATAACGAACA
AAACAAACCATCGCTTACATAAACTTTTTGAGGGGATCTGGGGAGGTTGTTTTATTATTTTATTTAGTTCATCGCACATT
GGGTA-AGAAA--AAGGTTTTTATGTTCTTTACAACGTTGAGCCCAAAAAAATTGACACATTTTTCAA-AGGTTAGTTTT
TGTAAGCTATATGAAA-TCACTAAATGTCTAATTTGCTTCCATACATATATATGTTTATCGTGGTACTATAGTTTTACTG
GTCATGAAAAACACCACGACGCTAG-----------------GTCAAGGCGAGACACATCATTCATCAGTCTACCTTAGG
CAGGGTCTATCAATACAGTTTCCTCAGCCAAAAAACATTTTGTCGCGACGCTTTGGG-AAATAAAGTCGTCATGAGACCA
TCACATTTTCGTTTTT-TGAAATGACTTTTTAAAAGTCTCTTATCTCATCATGACATAATTT------------------
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>chr7D_212
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------ATTCAAACAAATATGTAAATAATGAACA
AAACTAACC--TGCTTACATAGAGGTTTT-TTGGGATATGTAGAGGTTGTTTTATGATTTCATTTAGTACATGCGAGTCA
T-GTA-AAAAA--AAGGTTTCCATGTTCTGTACAGTGTTGAGCCCAAAACAATTCACACAACTTCCTACAAATTAGTTTT
TGTAAGCTATATGAAAATGACTAAATATCTAATTTGCCTCCATACACATCTATGTTTGTTCTGGTATCATAGTTTTACTG
ATTAGGGTAAAGAGTGTGACCATCACATTTGCCTCCATACACATCAAGGCGAGACACATCATTCATTAGTCTCGCTTAGG
CAGGGTCCATTAATGCAGTTTGCTCAGTCATTTTTT-TTTTGTTGTAACGCCTTAGG-AAATGAAGTCATGATGAGACCA
TCACATTTTTAG-CTTTT--GATGACTTCTTAGAAGTTTCTTATCTCATCATGACATGATTTAGACATAGTTTCTGAAAT
CACATTTTTAAAGTCCTGATCTCATCCTGACATA----------------------------------------------
--------------------------------------------------------------------------------
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---------------------------------------------------------
>chr6D_784
--------------------------------------------------------------------------------
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-----------TTGTACTGAAACTAGTACAAAGTTGAGACACTTATTTTAGGACGGATCTCGTGGAATAACGAAATTCTT
CTATTACTCACATTTGAAGAACCCATTTTTTTAAATAGATTTTTTTAGGGAATTAAAAAAATAGATTTTAGAAAATAGAT
GAGAACCCAAAAATTTGTAAGCCATGTGGTTGGATATGGTGGCGAATGGAGGGGGAAAGGCCCACCCACAGCCCACAGGA
ACATGAGACGCGTAGCTAGGCCCACGATGACCCGCCAGACAGCGGAAGGGAAGGCAACAGGAGGATATTTCTTTCTCTCA
AAAAAAGAAAGGAAAAAAGGGCAACGGGAGGATCGAGAAGGGGCGAGGGTGGTTGTTTGGACGGAGTTGGGGACTTGGGG
GATCGATCGATCGGAGG---------------AGGGGCGGCGGGATGACGCGGGGGAAGCAGAAGATCGACGCGCAGCGG
AAGAGCGCGGAGAAGAACCAAAAGTCCAAGGGGTCGCAGCTCGAGGCCCGCGCCGTCGGCCTCAAGGTCGTCTGCCCAAT
CTGCAAGGTCAGCGCACGCGCTCTCTTCTTCC------TCTTCCTAATCCCTACTATCT--CGGCACGGATCTGAAGCCT
CAGTCAGGGTCTCCATCCGC----ATCCGATCCCGTGCGCGCTGTCCTGTTCCCCTTTTGGGCTAGTAGTAATTCTG---
---------------------GGGCAGAGTAGATGATGGCGAGTAGCCGATCTGAATCCTGCAACCAGCATGATAAGATC
ATACGAATCAAGTTAGAA----------------AACCGGATATACTCCTGCTAGCT---------------TTACATGG
ATACATGTTCGTTCCTCGTGATTGATGCAGTGTCAACTTATGTACTGTATATAACATTACCTATATATGTGTGTGCAGGC
GCAACTGGCCAACGAGAAGCAGTTGATTGATCACTATGGATCGAAGCATCCCAAGGAGAAACCTCCAGGTCCATCAAATG
CAGAGTGACTGATGCGAAGCGGAAGCATGAGCTATACTTTGACTGTTTCTGAGGGTG-TTCAATCTGCTCCACACTTGGA
CGACTTGAGCCTCAGCTTTACCCTATGTAATGCATGCATTTCCTCTTGTTCCAGGCAAGAACCTTGATGATGAGCATGTA
TTTGCCTTCTGTGAGCATC-TTGTCGAACTGTCAGCATACCTTCAAACTGTATGTGGTGCAATCTTTGGATAAGAGAATG
CTAAACTC---TCAATTATGGCATTCTCCTGTTGCGCGATTTGCTGTCTAAAGAGCCGAAAAATGAATGTTTTCCTCGTT
CAC----------GTGTTTGTGTGTGGTATATACAGCAGCTGGAAAATGAATTGTTCTGGTTATTCGAAACAAAAAGCAT
GTCCTGAAGGGAAGTGATGACATACAAACTTTTTTTT-GGGTGGTGACATACAAA---------AGATAAAAAAGCACCA
CAGAAACAGGAATGATGTGTTACATCCCAAATCAGGGTACTACCATAATTGATATGGGTTTTCAAATTCTAAACAAGACT
TCAAAGTACGGTAAATTGCTCCATTTTTTGGTTC---CACGCATTTGAGGCAATTGTATTGATTTGCTGTGTCCCTGGAG
CTGCATCATGCCGAGAATCATCCAAATCATAGACGGTCTCCGGGGTGCTTCACTATGATTGACACCAGCATGT-------
--------------------------------------------------------------------------------
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>chr6B_993
--------------------------------------------------------------------------------
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-----------------AGGCCCACGAAGACCCGGCGGACAGCGGAAGGGAAGGCAACGGGAGGATCTTTCTTTCTCTCA
AGAAAA-----------------------------AGGAGGGTCGAGGGTGGTTATTTGGACGGAGTTGGGGACTTGGGG
G-TCGATCGATCGGAGGCGGAAGAGAAGGAGGAGGGGCGGCGGGATGACGCGGGGGAAGCAGAAGATCGACGCGCAGCGG
AAGAGCGCGGAGAAGAACCAGAAGTCCAAGGGGTCGCAGCTCGAGGCCCGCGCCGTCGGGCTCAAGGTCGTCTGCCCCAT
CTGCAAGGTCAGCGCACGCGCTCTCTTGTTCCTCTTCTTCTTCCTAATCCCTACTATCG--CGGCGCGGATCTGAATCCT
CAGTCAGGGTCTCCATCCGC----ATCCGATCCCATGCGCGCTGTCCTGTTCCCC--TTCAATTCTGGGGCCAGTCATCT
ACTATCTATCTATCTATCCCAGGGCAGAGTAGATGATGGCGAGTAGCCGATCTGAATCCTGCAACCAGCATGATAAGATC
ATAAGAATCAAGTT-GAAAACTGTGCGCAAGCATAACCGGATATACTCCTACTAGCTAGTGTATTATTAGCTTTACATGG
ATACAT----GTTCCTCATGATTGATGCAGTGTCAACTTCATGTA-GTATATAACATTACCTATATATGTGTGTGCAGGC
GCAACTGGCCAACGAGAAGCAGTTGATTGATCACTATGGATCAAAGCATCCCAAGGAGAAACCTCCAGGTCCATCAAATG
CAGAGTGACTGATGCGAAGTGGAAGCATGAGCTATACTTTGCCTGTTTCTGAGGGTG-TTCAATCTGCTCCACACTTGGA
CGACTTGAGCCTCAGCTTTACCCTATGTAATGCATGCATTTCCTCTTGTTCCAGGCAAGAGCCTT--TGATGACCATGTA
CTTGCCTTCTATGAGTATCTTTGTCCAACTGTCAACATACCTTCAAACTGTATGTGGTGCAATCTTTGGATAAGAGAATG
CTAAACTTTTTTCGATTATGTCATTCTCCTGTTACGTGC--TGCTGTCTAAAGAGCCGAAAAATGAATGTTTTTCTCGTT
CATGTGTGTGTGTGTGTGTGTGTGTGGTATATACAGCAGCCGGAAAATGAATTGTTCTGCTTATTTGAAACAAAAAGCAA
GTCCTGAAGGGAAGTCATGACATACAAACTTTTTTGGGGGGTGATGGCATACAAA---------AGAT-AAAAAGCACCA
CAGAAACAGGAATGATGAGTTACATCT------AGGGTACTGCCATAATTGCTACGGGTTTTCAAATTCTAAACACGACT
TCAAAGTAGGGTAAATTGGTCCTTTTTTTTGTT---GCACGCATTTGAGGCAATTATATTGA-TTGCTGTGTCCCCGGAG
CTGCATCATGCTGAGAATCATCCAAATCATAGACGGTCTCCAGGGTACTTCACTATGATTGACAACAGCATGT-------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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---------------------------------------------------------
>SNPs
-------------------------------------------------------------S------------------
----------------------------S---------------------------------------------------
-----------------------------------------------S--------------------------------
--S--------------------S--------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------S--------------------------------S--------
----------------------S----------------------------S----------------------S-----
-----------------------S----------------------------------------------S---------
-------------------------------------------------------------------------S------
--------------------------------------------------------------------------------
------------------S---S--S-S------------------------------S--S------------------
--------------S-------------SSSS--S-S--SSSS-------------------------------------
-----------------------S---------------------------------S----------------------
-------S-------S-------S-------------------------------------S------------------
---------------------------------------------------------------------------SSS--
--------------------------------S-----------------------------------------------
--------------------------------------------------------------------------------
-------------------------------S---------------------SSSSS-SS------------------S
-------------------SSSSS-----------------S----S---------------------------------
----------------------------------------S---------------------------------------
-------------------------S-------------------------------S------S---------------
--S--------------------------------------------------S------------------------S-
S-------------------------------------------------------------------------------
-----------------S--------------------------------------SS------------------S---
-------------------------------------------S------------------------------------
--------S----------------S--------------------------------S---------------------
---------S----------------------------------------S-----S-----------------SSSS-S
S-------------------------------------S---S----S--------------S-----------------
-------------------------------------------------------SSSSSSSSS----------------
--------------------------------------------------------------------------------
---------------------------------SSS-------------------S------S-----------------
----------S------------------S-------------S----------------------S------SSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
>forward_1048
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------CAGCCCACAGGA
ACATGAGT------------------------------------------------------------------------
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>reverse_2712
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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-----------------------------------------------------------------------TCGGAGTGG
GTTTAGGAGGT---------------------------------------------------------------------
--------------------------------------------------------------------------------
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---------------------------------------------------------
