>input_sequence_62522
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------------------------------------------------------CTATATAAACGGCTTGCCACCGCGCC
TTGCCATGCACAGTCACCTCGTAAGCAAGCAGCT-ACGAGGGCCTCAACAAGCA----------AACCTTGATTGTTGAT
TCGACATGGCGAAGTCGCCCATGGCGAT---------CCTGGCTCTCGGGCTAGCAGCAGTAGTCCTATCTGGCGCCGGA
CTGGC---------------------------------------------------------------------------
------------------------------------------------------GAGCGGCGATCCCGTGGAGAGCGTCG
TCACCGACGCGTTCTTCGACGGGATCAAGTCCCAGGCCGCCGACGGC---GGGTGCCCCGGCAAGAGCTTTTACACGCGC
CAGTTTTTCCTGGACGGCGCCCAGGCGAACCCCGACTTCGGGAAAGGCGGCACCAGCGACGACGGCAAGAGGGAGATAGC
CGCCTTCTTCGCCCACTTCACCCACGAGACTGGATGTAAGCTAAACGAAAGCACTCATA----------TACCAACACTA
GACGAGTTTAAACTTTAATTAGCTCTCCATAATTAAGCTGTCGATGTAACTTGTTACTTGTGTACAGACATGTGCTACAT
CGAGGAGAAGGACGGGGCGAGCCAGAACTACTGCGACACGAATTACCCGCTGTGGCCGTGTACCTCGGGGAAGGCGTACT
ACGGGCGCGGGCCGCTGCAGCTGACGTGGAACTACAACTACGGGGCGGCGGGGCAGAAGCTCGGCTTCAACGGGCTCGAC
AACCCGGAGAAGGTGGCGCAGGACCCGGCGTTGACGTTCCAGGCGGCGTTCTGGTTCTGGATGACCAACGTGCATCAGGT
CGTGCCGCAGGGGTTCGGCGAGACGAGCAGGAAAATCAACAGTGGCG---AGTGCAACGGCGGGAACGCGCCGGCGATGA
ACGCGCGGGCGAACTACTACGTGGAGTACTGCAAGCAGTTCGGGGTCGACCCGGGGAACAACCTCACTTGCTAGATTC--
---------TTGATCGACGCGCGAAAACATTATTTCAGACGATGCTCGTACTTACAGCTCTACCTCCCTGTGTATTCTGG
GATCATCTCTATATTCTGTATATGT----AATTTGGATTTCTGTATTCATATATCGGTAATATAAACA----TA------
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----------------------------------------
>chr2D_1_TraesCS2D01G349400
CAGACCCAGATGGGGCCCGAAGGGCCCAGATCTGGGCCGAGCGGGCGCTGCCTGGCCGCGCCACCCCGCCGCCAACGGCG
ATGCCGCCGTCCAGCCGATCTCCCGCGCCGCGCCAGCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGGCGCCCTCCGCCCCGCGCCGGAG
AGCAACCGAGAGGGGAATGGCCGAGGGCCGCCGCCACCAGCGTCGCCCGGGCCAGGCCCGGCGGCGAACGCCAGCGACGG
CGGCGGGGAGGGGGAGAGAGGGAGAGCTGGCGGAAGGGGAATCGGGGCGCGACCGGTCGCCCGTGGGGGCGCGCGGTCGC
GAGAGGAGGAGAAGGGCTACTCACTCTGTTTCACCGGAGCTGGACCAGCCTTTTTACTTTGGTCCAAAAATTATAAAAGT
TTCTAAATATGTGTTTTTTGAGCTTTTATGGCTTTTGGTGCTCCAAAAGCAATAAAAGCTAAAAAACACTTATTTAAAAG
CTTTTATGGTTTTTTGGTCAAAGTAAAAAAACTGTAAAAGCAGAAGCAAAAATCCAAACAAACAGTGCCTAAGCTTGGAA
CCATGACT-CTGCAAAGAAAAGTC-TGATAGTCGACGAGCCGCG--TGATTCTTTGAACGAGGGTCGGTTTGATCTAGTC
CAACCTTGACGCC-CTAGTCGTCCACAA-GATCAAACTTGCTGTG--------TCTATATAAACGGCTTGCCACCGCGCC
TTGCCATGCACAGTCACCTCGTAAGCAAGCAGCT-ACGAGGGCCTCAACAAGCA----------AACCTTGATTGTTGAT
TCGACATGGCGAAGTCGCCCATGGCGAT---------CCTGGCTCTCGGGCTAGCAGCAGTAGTCCTATCTGGCGCCGGA
CTGGC---------------------------------------------------------------------------
------------------------------------------------------GAGCGGCGATCCCGTGGAGAGCGTCG
TCACCGACGCGTTCTTCGACGGGATCAAGTCCCAGGCCGCCGACGGC---GGGTGCCCCGGCAAGAGCTTTTACACGCGC
CAGTTTTTCCTGGACGGCGCCCAGGCGAACCCCGACTTCGGGAAAGGCGGCACCAGCGACGACGGCAAGAGGGAGATAGC
CGCCTTCTTCGCCCACTTCACCCACGAGACTGGATGTAAGCTAAACGAAAGCACTCATA----------TACCAACACTA
GACGAGTTTAAACTTTAATTAGCTCTCCATAATTAAGCTGTCGATGTAACTTGTTACTTGTGTACAGACATGTGCTACAT
CGAGGAGAAGGACGGGGCGAGCCAGAACTACTGCGACACGAATTACCCGCTGTGGCCGTGTACCTCGGGGAAGGCGTACT
ACGGGCGCGGGCCGCTGCAGCTGACGTGGAACTACAACTACGGGGCGGCGGGGCAGAAGCTCGGCTTCAACGGGCTCGAC
AACCCGGAGAAGGTGGCGCAGGACCCGGCGTTGACGTTCCAGGCGGCGTTCTGGTTCTGGATGACCAACGTGCATCAGGT
CGTGCCGCAGGGGTTCGGCGAGACGAGCAGGAAAATCAACAGTGGCG---AGTGCAACGGCGGGAACGCGCCGGCGATGA
ACGCGCGGGCGAACTACTACGTGGAGTACTGCAAGCAGTTCGGGGTCGACCCGGGGAACAACCTCACTTGCTAGATTC--
---------TTGATCGACGCGCGAAAACATTATTTCAGACGATGCTCGTACTTACAGCTCTACCTCCCTGTGTATTCTGG
GATCATCTCTATATTCTGTATATGT----AATTTGGATTTCTGTATTCATATATCGGTAATATAAACA----TAATAAAT
AAACATTTCTTGACAGC--ATCCAAATGCTGCCAACAT--TTCATTATTCCAGAGT-TTTTGATTATTTCGGAGAAGTGA
TTCTACTTTTTTCAGCAAAGTTGTTTTTCACTACTTTAACTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGTGTAT
TCATGAATTATTATTTTTACTTCAGAAAGTGATACTCCCTCTCTCTCAGGGCGTGCGCGTACCCCTAGGTCGTCAATTTG
ACCAACCAAATACAAATCATATATTACAAAAAATATACTAATATAAACTTCAGATGTTCTATTTTCAAACAGTATAATTT
TTGTGTTATATAGTTTATATTAGGGTGATAAAATTGGCAACCTAGGTATACGCGCAGGACTTGTAAACTGAAACGGAGGA
AGTATCAAATATTTCATTATTGCAGAAATTTAAATTATTTCAAAAAAGTGTTTTGCACTACTAAAAAAGATTAATTCAAC
TATTTCATAAAAGTGCTTAAAAATATTCTACTCCAGAAATTACAATTATTTTAGTACAATGATTTTAACAATTTCATATA
AATGATTTCCAATATTTCATTGTTGTTGTAGGAAAACAA-
>chr2D_866
TGCTCT--------------------------------------------------------------------------
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----------------------------------------------------------------------AAGCTTTGAA
ACATGACCCCTGCAAAGAAAAGTA---------GACGAGCCGTG--TGAATCTGTGACCGAAGGTCGGTTTGATCTAGTC
CAACCTTGACGCC-ATAGTCGTCCACAA-GATCAACATC-CACTG--------CCTATATAAACCGCTTTTCACCGCGCC
TTGCCATGCACAGTCACCTCGTAAGCAAGCAGCT-GCTACAGCCTCAACAATCA----------AACC-------TTGAT
TCGACATGGCGAAGTCGCCCATGGCGAT---------CTTGGCTCTCGGGCTAGCAGCACTAGTCCTATCCGGCGCCGGG
CTGGTGGCCGCGCAGAACTGCGGCTGCCAGCCGAACGAGTGCTGCAGCAAGTACGGTTATTGCGGGACCGATGCCAGCTA
CTGCGGACAAGATTGTCGGTCGGGCCCGTGCACGGCGA------GCGGCGGCGGGAGCGGCGATCCCGTGGAGAGCGTCG
TCACCGACGCGTTCTTTGACAGGATCAAGTCCCAG---GCCGCCGAC---GGGTGCCCCGGGAAGAGCTTTTACACGCGC
CAGTTTTTCCTGGACGGCGCCCAGGCGAACCCCGACTTCGGCAAAGGCAGCACCAGCGACGACGGCAAGAGGGAGATAGC
CGCCTTCTTCGCCCACTTCACCCACGAGACCGGACGTAAGTTCACCTCCAAC---TT----------------AACACTG
GACGA-----------ATTTACCTCTCCATAATTAAGCAGGCTA-TA----TGTAACTTGCGTGCAGACATGTGCTCCAT
CGAGGAGAACGAAGGGGCGAGCAAGGATTACTGCGACGAGACGAACACGCAATGGCCGTGTACCCCGGGGAAGGCGTACT
ACGGGCGCGGGCCGCTGCAGCTGTCGTGGAACTACAACTACGGGGCGGCCGGGGAGAGCACCGGGTTCGACGGGCTCAAC
AGCCCGGAGACGGTGGCGCAGGACCAGGCGCTAACGTTCAAGGCGGCGTTCTGGTTCTGGATGACCAACGTGCACCAGGC
CGTGCCCAGCGGGTTCGGCGCGACGACCAGGGCAATCAACGGTGACGTGGAGTGCGACGGCAAGAAGCCAGACTTGGTGA
GCGCGCGGGCGGGCTACTACACGGACTACTGCCAGCAGTTCGGCGTCGACCCAGGGAATAACCTCACTTGCTAGGTGCTT
GGGTCTGAATTGATCGACGCGCAAAACCC---TTTCTGGCGATGCTCCTACT----GCTCTACCTCCCTGTGTATTCTGG
GAT-ATCTATATATCCTGTATATGTAATAAATTTACATCTCTGTATTCATATATCGGTAATGCAAACA----TACTAAAT
AAACATTTCTTGACAAAATATCCAAATGATGCAAATAT--TTCATCATTCCAGAAA-TTGTGATTATTTTAGAGAAGTGA
TTTTAACTATTTCAGA----------------------------------------------------------------
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-------------------------------------------------------------------------------A
ATTTATTTCCACTATTT-----------------------
>chr2D_869
--------------------------------------------------------------------------------
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--------------------------------------------------------------------CTAAGCTTTGAA
ACATGACCCCTGCAAAGAAAAGTA---------GACGAGCCGTG--TGAATCTGTGACCGAAGGTCGGTTTGATCTAGTC
CAACCTTGACGCC-ATAGTCGTCCACAA-GATCAACATC-CACTG--------CCTATATAAACCGCTTTTCACCGCGCC
TTGCCATGCACAGTCACCTCGTAAGCAAGCAGCT-GCTACAGCCTCAACAATCA----------AACC-------TTGAT
TCGACATGGCGAAGTCGCCCATGGCGAT---------CTTGGCTCTCGGGCTAGCAGCACTAGTCCTATCCGGCGCCGGG
CTGGTGGCCGCGCAGAACTGCGGCTGCCAGCCGAACGAGTGCTGCAGCAAGTACGGTTATTGCGGGACCGATGCCAGCTA
CTGCGGACAAGATTGTCGGTCGGGCCCGTGCACGGCGA------GCGGCGGCGGGAGCGGCGATCCCGTGGAGAGCGTCG
TCACCGACGCGTTCTTTGACGGGATCAAGTCCCAG---GCCGCCGAC---GGGTGCCCCGGGAAGAGCTTTTACACGCGC
CAGTTTTTCCTGGACGGCGCCCAGGCGAACCCCGACTTCGGCAAAGGCAGCACCAGCGACGACGGCAAGAGGGAGATAGC
CGCCTTCTTCGCCCACTTCACCCACGAGACCGGACGTAAGTTCACCTCCAAC---TT----------------AACACTG
GACGA-----------ATTCACCTCTCCATAATTAAGCAGGCTA-TA----TGTAACTTGCGTGCAGACATGTGCTCCAT
CGAGGAGAACGAAGGGGCGAGCAAGGATTACTGCGACGAGACGAACACGCAATGGCCGTGTACCCCGGGGAAGGCGTACT
ACGGGCGCGGGCCGCTGCAGCTGTCGTGGAACTACAACTACGGGGCGGCCGGGGAGAGCACCGGGTTCGACGGGCTCAAC
AGCCCGGAGACGGTGGCGCAGGACCAGGCGCTAACGTTCAAGGCGGCGTTCTGGTTCTGGATGACCAACGTGCACCAGGC
CGTGCCCAGTGGGTTCGGCGCGACGACCAGGGCAATCAACGGTGACGTGGAGTGCGACGGCAAGAAGCCAGACTTGGTGA
GCGCGCGGGCGGGCTACTACACGGACTACTGCCAGCAGTTCGGCGTCGACCCAGGGAACAACCTCACTTGCTAGGTGCTT
GGTTCTGAATTGATCGACGCGCAAAAACC---TTTCTGGCGATGCTCCTACT----GCTCTACCTCCCTGTGTATTCTGG
GAT-ATCTATATATCCTGTATACGTAATAAATTTACATCTCTGTATTCATATATCGGTAATGCAAACA----TACTAAAT
AAACATTTCTTGACAAAATATCCAAATGATGCAAATAT--TTCATCATTCCAGAAA-TTGTGATTATTTTAGAGAAGTGA
TTTTAACTATTTCAGA----------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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-------------------------------------------------------------------------------A
ATTTATTTCCACTATTT-----------------------
>chr2A_869
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------CTAAGCTTTGAA
ACATGACCCCTGCAAAGAAAAGTCTTTATAGTCGACGAGCCGTG--TGAATCTGTGACCGACGGTCGGTCTGATCTAGCC
CAACCTTGACGCC-ATAGTCGTCCGCAA-GATCAAACTTGCTGTG--------TCTATATAAACCGCTTGCCACCGCGCC
TTGCCATGCACAGTCACATCGTAAGCAAGCAGCT-ACTAGGGCCTCAACAAGCA----------AACCTTGATTGTTGAT
TCGACATGGCGAAGTCGCCCATGGCGAT---------CCTGGCTCTCGGGCTAGCAGCAGTAGTCCTATCTGGCGCCGGA
CTGGC---------------------------------------------------------------------------
------------------------------------------------------AGGCGGCGATCCCGTGGAGAGCGTCG
TCACCGACGCGTTCTTCGACGGGATCAAGTCCCGGGCCGCCGCCGAC---GGGTGCCCCGGCAAGAGCTTTTACACGCGC
CAGTTTTTCCTGGACGGCGCCCAGGCGAACCCCGACTTCGGGGAAGGCGGCACCAGCGACGACGGCAAGAGGGAGATAGC
CGCCTTCTTCGCCCATTTCACCCACGAGACTGGATGTAAGCTAAACGAAAGCACTCATA----------TACCAACACTA
GACGAGTTTAAGCTTTCATTAGCTCTCCATAATTAAGCTGTCGATGTAACTTGTTACTTGTGTACAGACATGTGCTACAT
CGAGGAGAAGGACGGGGCGAGCCAGAACTACTGCGACACGAATTACCCGCTGTGGCCGTGTACCTCGGGGAGGGCGTACT
ACGGGCGCGGGCCGCTGCAGCTGACGTGGAACTACAACTACGGGGCGGCGGGGCAGAAGCTCGGCTTCAACGGGCTCGAC
AACCCGGAGAAGGTGGCGCAGGACCCGGCGTTGACGTTCCAGGCGGCGTTCTGGTTCTGGATGACCAACGTGCATCAGGT
CGTGCCGCAGGGGTTCGGCGAGACCACCAGGAAAATCAACAGTGGCG---AGTGCAACGGCGGGAACGCGCCGGCGATGA
ACGCGCGGGCGAACTACTACGTGGAGTACTGCAAGCAGTTCGGGGTCGACCCGGGGAACAACCTCACTTGCTAGATTC--
---------TTGATCGACGCGCAAAAACATTTTTTCAGACGATGCTCCTACTTACAGCTCTGCCTCCCTGTGTATTCTGG
GATCATCTATATATTCTGTATATGT----AATTTGGATTTCTGTATTCATATATCGGTAATATAAATAAACGTAATAAAT
AAACATTTCTTGACAGC--ATCCAAATGCTGCCAATGT--TTCATTATCCCAGAGTTTTTTTATTATTTCGGAGAAGTGA
TTCTACTTATTTCAGCAAAGTTATTTTTCACTACTTTAACTATTCATAGTTTTTGATTCTTTCCTTGGTTTTCCCTTCGT
TTCGGGGCTGAGCAACCCATTTGCTCTGTTCTGCTCATGGTAATAGCCGCGCAGTTCATTGTTCACGCCGAGTAGTAATG
CCCCCTCCATTTGTTGTACCTTTTCTACCTATCAATGCAAAGATACACAAATGCAT------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------GTGTAT
TCATGAATTATTATTTTTACTTCAGAAAGTGATA----------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----TCAAATATTTCATTATTCCAGATATTTAAATTATTTCAAAAAAGTGTTTTGCACTACTAAAAAAGATCAATTTAAC
TATTTCATAAAACTGCTTAAAAATATTCTACTCCAGAAATTACAATTATTTTAGTACAATGATTTTAACAATTTCATATA
AATGATTTCCAATATTTTATTGTTGTTGTAGGGAAAACAA
>chr2B_869
--------------------------------------------------------------------------------
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--------------------------------------------------------------------CTAAGCTTTGAA
ACATGACACCTGCAAAGAAAAGTCATGATAGTCGACAAGCCGTG--TGAATCTGTGAACGAAGGTTGGTTTGATCTAGTC
CAACCTTGACGCC-ATAGTCGTCCACAA-GATCAAACCTGCTGTGTCTATTATTCTATATAAACCGCTTGCCACCGCGCC
TTGCCATGCACAGTCACCTCGTAAGCAAGCAGCT-ACTAGGGCCTCAACAAGCA----------AACC-------TTGAT
TCGACATGGCGAAGTCCCCCATGGCGAT---------CTTGGCTCTCGGGCTAGCAGCACTAGTCCTATCTGGCGCCGGA
CTGGTGGCGGCGCAGAACTGCGGCTGCCAGCCGAACGAGTGCTGCAGCAAGTACGGTTATTGCGGGACCGATGACAGGTA
CTGCGGACAAGATTGTCGGTCGGGCCCGTGCACGGCGA------GCGGCGGCGGGAGCGGCGATCCCGTGGAGAGCGTCG
TCACCGATGCGTTCTTCGACGGGATCAAGTCCCAG---GCAGCCGACGAGGGGTGCCCCGGCAAGAGCTTTTACACGCGC
CAGTTTTTCCTGGACGGCGCCCAGGCGAACCCCGACTTCGGGAAAGGCAGCACCAGCGACGACGGCAAGAGGGAGATAGC
CGCCTTCTTCGCTCACTTCATCCACGAGACTGGGCGTAAGTTCACCTCCAAGCTCCAACTAACTACTACTACCAACACTG
GAGGA-----------ATTTACCTCTCCATGATTAAGCTGGCTG-TA----TGTAACTTGTGTGCAGACATGTGCTCCAT
CGAGGAGAACGGAGGGGCGAGCAAGGATTACTGCGACGAGACGAACACGCAATGGCCGTGTACCCCGGGGAAGGCGTACT
ACGGGCGCGGGCCGCTGCAGCTGTCGTGGAACTACAACTACGGGGCGGCCGGGGAGAGCACCGGGTTCGACGGGCTCAAC
AGCCCGGACACGGTGGCGCAGGACCAGGCGTTAACGTTCAAGGCGGCGTTCTGGTTCTGGATGACCAACGTGCACCAGGC
CGTGCCGCAGGGGTTCGGCGAGACGACCAGGAAAATCAACGGCGACGTGGAGTGCGACGGAAAGAGGCCAGACTTGGTGA
GCGCGCGGGCGGGCTACTACACGGAGTACTGCAAGCAGTTCAACGTCGACCCAGGGAACAACCTCACTTGCTAGGTGCTT
GGGTCTGAATTGATCGACGCGCAAAAGCC---TTTCTAGCGATGCTCCTACT----GCTCTACCTCCCTATGTATTCTGG
GAT-ATCTATACACTATGTATATGTAATAAATTTGGATTTCTGTATTCATATATAGGTAATGTAAACA----TACTAAAT
AAACAATTCTAGGCAAC--ATCCAAATGATGCCAATA--TTTCATTATTTCAGAAA-ATTTGATTATTTTGGAGAAGTGA
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----------------------------------------
>chr2A_873
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------------------------------------------------------------------------GCTTTGAA
ACATGACCCCTGCAAAGAAAAGTCTTGATAGTCGACGAACCGTG--TGAATCTGTGACCGACGGTCGGTTTGATCTAGCC
CAACCTTGACGCC-ATAGTCGTCCGCAA-GATCAAACTTGCTGTG--------TCTATATAAACCGCTTGCCGCCGCGCC
TTGCCATGCACAGTTACCTCGTAAGCAAGCAGCT-GCTACAGCCTCAACAATCA----------GACC-------TTGAT
TCGACATGGCGAAGTCGCCCATGGCGAT---------CTTGGCTCTCGGGCTAGCAGCACTAGTCCTATCCGGCGCCGGG
CTGGTGGCCGCGCAGAACTGCGGCTGCCAGCCGAACGAGTGCTGCAGCAAGTACGGTTATTGCGGGACCGATGCCAGCTA
CTGCGGACAAGATTGTCGGTCAGGCCCGTGCACGGCGA------GCGGCGGCGGGAGCGGCGATCCCGTGGAGAGCGTCG
TCACCGACGCGTTCTTCGACGGGATCAAGTCCCAG---GCCGCCGAC---GGGTGCCCCGGCAAGAGCTTCTACACGCGC
CAGTTTTTCCTGGACGGCGCCCAGGCGAACCCCGACTTCGGGAAAGGCAGCACCAGCGACGACGGCAAGAGGGAGATAGC
CGCCTTCTTCGCCCACTTCACCCACGAGACTGGGCGTAAGTTCACCTCCAAC---TAACTA---ACTACTACCAAAACCG
GACGA-----------ATTTACCTCTCCATAATTAAGCTGGCTG-TA----TGTAACTTGCGTGCAGATATGTGCTCCAT
CGAGGAGAACGAAGGGCCGAGCAAGGATTACTGCGACGAGACGAACACGCAGTGGCCGTGTACCCCGGGGAAGGCCTACT
ACGGGCGCGGGCCGCTGCAGCTGTCGTGGAACTACAACTACGGGGCGGCCGGGGAGAGCACCGGGTTCGACGGGCTCAAC
AGCCCGGAGACGGTGGCGCAGGACCAGGCGCTAACGTTCAAGGCGGCCTTCTGGTTCTGGATGACCAACGTGCACCAGGC
CGTGCCGCAGGGGTTCGGCGAGACCACCAGGAAAATCAACGGCGACGTGGAGTGCGACGGCAAGAGGCCAGACTTGGTGA
GCGCGCGGGCGGGCTACTACACGGACTACTGCCAGCAGTTCGGCGTCGACCCGGGGAACAACCTCACTTGCTAGGTGCTT
GGGTCTGAATTGATCCACGCGCA---------------GCGATGCTCCTACT----GCTCTACCTCCCTGTGTATTCTGG
GAT-ATCTATATATTCTGTATATGTAATAAATTTGGATTTCTGTATTCATATGTCGGTAATGTAAACA----TACTAAAT
AAACATTTCTTGACAAAATATCCAAATGATGCAAATATATTTCATTATTCCAGAAA-ATTTGATTATTTTGGAGAAGTGA
TTTTAACTTTT---------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
----------------------------------------
>chr2D_891
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
-----------GCAAAGAAAAGTCTTGATAGTCGACGAGCCGCG--TGATTCTTTGACCGACGGTCGGTTTGATCTAGTC
CAACCTTGACGCCGAGAGTCGTCGGCAATGATCGACGTC-CACTG--------CCTATATAAACCGCCTGCGACCA--CC
TTGCCATGTACACTCAGCTCGTAAACAAGCAGCT-GCTAGAGCGGAACAAGTTTGGCCACCGTTAACC-------TTATT
TCGAAATGGCGAGGTCGCCCATGGCGATGCTCCCGTTCTTGGCGCTCGGGGTGGCAGCACTAGTCCTATCTGCCGCGGGA
ATGGTGGCCGCGCAGAAGTGCGGCTGCCGGGCGAACGAGTGCTGCAGCCAGTACGGGTATTGCGGCACTACCGACGCCTA
CTGCGGACAAGGGTGTCAGTCTGGCCCGTGCTCGGGGAGCGGCGGCGGCGGCGGGAGCGGCGTCTCCGTGGAGAGCGTCG
TCACCGAGGCGTTCTTCAACGGGATCAAGTCCCGG---GCCGGCAAC---GGGTGCGCCGGCAAGAGCTTTTACACGCGC
CCGTCGTTCCTGAGCGCCGCCCGGGCCAACCCCAACTTCGGGAAAGGCCGCACGACCGACGACGGCAAGAGGGAGATAGC
CGCCTTCTTCGCCCACGTCACGCACGAGACCGGACGTAAGTTCAACTCCAAT---TAACCGACTA--------------A
CACGAATTTAATCTTGAATTAGCTCTCCATAATTCAGCGGCC----A----TGCAACTTGTGTACAGACATGTGCTACAT
CGAGGAGATCGGCGGGGCGAGGCAGAACTACTGCGACAGGAAGTACACGCAGTGGCCGTGCGCCTCGGGGAAGGGGTACT
ACGGGCGCGGGCCGCTGCAGCTGACGTGGAACTACAACTACGGGGCGGCGGGGAAGAGCGTGGGATTCGACGGGCTGAAC
AACCCGGAGAAGGTGGCGCAGGACCCGGAGGTGGCGTTCAAGGCGGCGCTCTGGTTCTGGATGAACAACGTGAAGCAGGT
CCTGCCGCGGGGGTTCGGCGCCACGACCAGGGCCATCAACAGCGGCG---AGTGCAACGGCGGGAACGCGGCCGCCATGA
ACGCCCGGGCGGGCTACTACAGGGCCTACTGCAGGCAGTTCGGCGTCGACCCGGGGAACAGCCTCACTTGCTAGGTGCTT
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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----------------------------------------
>chr2B_891
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
-----------GCAAAGAAAAGTCTTGATAGTCGACGAGCCGCGCGTGATTCTTTGACCGACGGTCGGTTTGATCTAGTC
CAACCTTGACGCCCGAAGTCGTCGGCAATGATCGACGTC-CACTG--------CCTATATAAACCGCTTGCGACCA--CT
TTGCCAAGTACACTCATCTCGTAAACAAGCAGCTTGCTAGAGCGGGACAAGCTTGGCCATCCTTAACC-------TTATT
TCGACATGGCGAGGTCGCCCATGGCGATGCTCCCGTTCCTGGTGCTCGGGGTAGCAGCACTAGTCCTGTCTGCCGCGGGA
ATGGTGGCCGCGCAGAAGTGCGGCTGCCGGGCGAACGAGTGCTGCAGCCAGTACGGCTACTGCGGCACTACCGACGCCTA
CTGTGGACAAGGGTGTCAGTCTGGCCCGTGCTCGGGGAGCGGCGGCGGCGGCGGGACCGGCGCCTCCGTGGAGAGCGTCG
TCACCGAGGCGTTCTTCAACGGGATCAAGTCCCGG---GCCGGCAAC---GGGTGCGCCGGCAAAAGCTTTTACACGCGC
CGGTCGTTCCTGGCCGGCGCCCGGGCGAACCCCAACTTCGGGAAAGGCCGCACGGGCGACGACGGTAAGAGGGAGATAGC
CGCCTTCTTCGCCCACGTCACACACGAGACCGGACGTAAGTTCAGCTCCAAT---CAACTGACTA--------------A
GACGAATTTAATCTTGAATTAGTCCTCCATAATTATGCTGGCTA-TG----TATAACTTGTGTACAGACATGTGCTACAT
CGAGGAGATCGGCGGGGCGAGCCAGAACTACTGCGACAGGAAGTACACGCAGTGGCCGTGCGCCTCGGGGAAGGGGTACT
ACGGGCGCGGGCCGCTTCAGCTGACGTGGAACTACAACTACGGGGCGGCGGGGAAGAGCGTGGGGTTCGACGGGCTGAAC
AACCCGGAGAAGGTGGCGCAGGACCCGGAGGTGGCGTTCAAGGCGGCGCTGTGGTTCTGGATGAACAACGTGAAGCAGGT
CCTGCCGCGGGGGTTCGGCGCGACGACCAGGGCGATCAACAGCGGCG---AGTGCAACGGCGGGAACGCGGCCGCCATGA
ACGCCCGGGCGGGCTACTACAGGGCCTACTGCAAGCAGTTCGGCGTCGACCCGGGGAGCAGCCTCACTTGCTAGGTGCTT
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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----------------------------------------
>chr2A_1157
TGGCG---------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
-----------------------------------------------GCGGCGGGAGCGGCGTCTCCGTGGAGAGCGTCG
TCACCAAGGCGTTCTTCAACGGGATCAAGTCCCGG---GCCGGCAAC---GGGTGCGCCGGCAAGAGCTTTTACACGCGC
CGGTCGTTCCTGGCCGGCGCCCGGGCCAACCCCAACTTCGGGAAAGGCAGCACCAGCGACGACGGCAAGAGGGAGATAGC
CGCCTTCTTCGCCCACGTCACCCACGAGACCGGACGTAAGTTCAACTCCAAT---TAACCGACTA--------------A
GACGAGTTTAATCTCGAATTGGTCCTCCATAATTAAGCTGGCTATTG----TATAACTTATGTACAGACATGTGCTACAT
CGAGGAGATCGGCGGGGCGAGGCAGAACTACTGCGACAGGAAGTACACGCAGTGGCCGTGCGCCTCGGGGAAGGGGTACT
ACGGGCGTGGGCCGCTGCAGCTGACGTGGAACTACAACTACGGGGCGGCGGGGAAGAGCGTGGGGTTCGACGGGCTCAAA
AACCCGGAGAAGGTGGCGCAGGACCCGGAGGTGGCCTTCAAGGCGGCGCTCTGGTTCTGGATGAACAACGTGAAGCAGGT
CCTGCCGCGGGGATTCGGCGCGACGACCAGGGCGATCAACAGCGGCG---AGTGCAACGGCGGGAACGCGGCCGCCATGA
ACGCCCGGGCGGGCTACTACAGGGCCTACTGCAGGCAGTTCGGCGTCGACCCGGGGAGCAGCCTCACTTGCTAGGTGCTT
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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----------------------------------------
>SNPs
SS-S-SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
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SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS--------S---
S------S-----------------------------------------------------S------------------
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-----------S--------------------------------------------------------------------
--------------------------------------------------------------------------------
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SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
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SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS------
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SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSS-----------------S----S--------------------------------------------S----S---
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>forward_680
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------TCACTCTGTTTCACCGGAGC----------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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----------------------------------------
>reverse_1947
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------GCAGGAAAATCAACAGTGGCG---------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------
>forward_681
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------CACTCTGTTTCACCGGAGCT---------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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----------------------------------------
>reverse_2861
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------ACCCCTAGGTCGTCAATTTG
AC------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------
