>input_sequence_62516
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--------------------------------------------ATGCAGGTTGCGGCCGGCTGCGAGGGCTCACCGGCG
GCGACGGAGGGGGGCGACCAGCAGAGCTCCAAGAAGCCGAGGCTGGCCGCCGAGCCGCTCCTCCTCCATGTGCCGGTGAA
GCAAGAGATGGTCGTGCACCAAGCGGCCGGAGCCGGAGGAGACGGGGCCGCGGTGGTGGCGGCGGACCACGGCTCTAGGA
TGGAGATCGCCGTGAAGATGGACGTGACCCTGCTCCATTGCCCCCTCTGCATCAGCCCCCTGAAGCCCCCCGTCCTTCAG
GTTCGCCTCCCTCGTTCCACTTCGGTTCGATTCGAC-TCCGCTACAGCAGCTTAGTATTTGATCTCTCCGGCCGGTCCGC
GCAGTGCAAGGGCGGGCATGTGGCCTGCGGCGGCTGCCTCGCGGAGCCCTGCGCGGAGTGTGGCGGCGCCTTCGACGTTC
GCAGCAAGGTGATGGACGCCGTCGTCTCCTCGACCACGGCCGAGTGCGACCACGACGGATGCGGGCGCTACGTGACCTAC
CACGAGCTCGACGGCCACCGCGGCGAGTGCCCGCACGCGCCCTGCGACTGCGCGGTCCCCGGCTGCGGCTTCGCCGGCCC
GGCGCCGGCGCTCCTCGGCCACCTGACCGCCCTCCACTCGATGCCGGTCTACAACTTCCAGTACGGCAAGGTCCTGGCGC
TCCAGCTGCCGGCGTCGCTGGAGCCGCGGGGCCTGCTGGTCGGGGACGAGGACGGCCGCGCGTTCCTCATGGTCGGCGGC
GCGCTCGGCTCCGGCGCGGCCGTGTCGGCGGTGTGCGTCAGGGCGGAGGCGATGCTGTGGCCGCGGTACACGCTCAAGGT
GTGGGCGAGCGGGCCGGCGCCGGCGCCGAACCGCAAGGCCGACACCGTCATGGCGGAGATCGAGGTGACGAGCAGCAGGG
TGCCCGGCGCCGTCGCCGTCGAGGAGCTGGCGTACCTGGCGGTGCCGCCCAAGCTGCTGGTTGGGGCAGGACCGTCCCGG
CGGATGTCTCTCAAGATCCGCATTGACAAGTTCACCTCCTGA--------------------------------------
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------------------------------------
>chr3D_1_TraesCS3D01G055600
ATTCATGGGACTTGAGATGCAGGACATCTTATTTTCTACAAGTTTCCTAGCCCTATGATATTTCTTA-CCTCTGAACCAA
AGGAGGCCTAAAGACTTTTAGAAGATCGGTTAAAGATGTCGTGAAAGGG-TGCTCTACCTGGCACCGCACAACTGCCATT
CAATAGAGTAAGATCTCCTTCCATTCAAAGGGATTCTATATGATTTTTGAAGGATTATAGCTCTTAGAATTTTTTT-CCT
ATGTTGATTGTCTGATTCATACTAGTGGTTAGGGGCCACCGTTATGAGTCACTTAAGA-GAAAGTTGTGCGGGCATTCTC
CATCTTCAAAAAAAGAAAAAAAACTCATCTTCATCGAAAAAATATTAAAAAAAAACTTATCGCATTATATGG-ACATCAC
AACCATCTCAAAAAGAAAAACAAGCCAGTAAAAGCTTTGCTAAAAAAAGGA-----AAAAGTCTCACTCCATCTTCTAAA
AGTAATCTCCAAAAT----AATCAAAAACTCTCTTACCGCGGCCAACC--AGCATGCGCCACGTGGCATAGCTGGCCGAC
CGCCCTTCGAATGTGCCTTGATGGGTTTAATGATAGAATCATATAGGAATTTTTTATATCCGATTATGTGTACTACAT--
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------------------------------------------------------TTATTAGAAATCTAGTAGAATCCACT
TTAACCTTCTTTTTACAATTTTTGTTTTCTCTTTTGGCATCAAACATTTTGTGTTAAATCCCATAGAATTCAAATGGACG
TGCCACTTTTAATCATG---TATTTTTCTTGTCACTACGTTGTGAGAATCCTTCGCATCAAATAGGGCCTAGCACCCTGC
CGCACCCCCACGAGGCTATCCCCTATGGCTGCGCGGTGCAGCTATGGCAATGGCAGGCACGGCTAGCCACGCACGCCACC
TTTTTACTCCTCCACTGGCCGCTGTCAACCAATAACTCACCAGCTGCTTCTTCTTTTACCGTGCT---------CACTCC
ACCTCTCGCACCCACACCAGAGACAGGGCCGGGTTTCTTCCAGGATGCAGGTTGCGGCCGGCTGCGAGGGCTCACCGGCG
GCGACGGAGGGGGGCGACCAGCAGAGCTCCAAGAAGCCGAGGCTGGCCGCCGAGCCGCTCCTCCTCCATGTGCCGGTGAA
GCAAGAGATGGTCGTGCACCAAGCGGCCGGAGCCGGAGGAGACGGGGCCGCGGTGGTGGCGGCGGACCACGGCTCTAGGA
TGGAGATCGCCGTGAAGATGGACGTGACCCTGCTCCATTGCCCCCTCTGCATCAGCCCCCTGAAGCCCCCCGTCCTTCAG
GTTCGCCTCCCTCGTTCCACTTCGGTTCGATTCGAC-TCCGCTACAGCAGCTTAGTATTTGATCTCTCCGGCCGGTCCGC
GCAGTGCAAGGGCGGGCATGTGGCCTGCGGCGGCTGCCTCGCGGAGCCCTGCGCGGAGTGTGGCGGCGCCTTCGACGTTC
GCAGCAAGGTGATGGACGCCGTCGTCTCCTCGACCACGGCCGAGTGCGACCACGACGGATGCGGGCGCTACGTGACCTAC
CACGAGCTCGACGGCCACCGCGGCGAGTGCCCGCACGCGCCCTGCGACTGCGCGGTCCCCGGCTGCGGCTTCGCCGGCCC
GGCGCCGGCGCTCCTCGGCCACCTGACCGCCCTCCACTCGATGCCGGTCTACAACTTCCAGTACGGCAAGGTCCTGGCGC
TCCAGCTGCCGGCGTCGCTGGAGCCGCGGGGCCTGCTGGTCGGGGACGAGGACGGCCGCGCGTTCCTCATGGTCGGCGGC
GCGCTCGGCTCCGGCGCGGCCGTGTCGGCGGTGTGCGTCAGGGCGGAGGCGATGCTGTGGCCGCGGTACACGCTCAAGGT
GTGGGCGAGCGGGCCGGCGCCGGCGCCGAACCGCAAGGCCGACACCGTCATGGCGGAGATCGAGGTGACGAGCAGCAGGG
TGCCCGGCGCCGTCGCCGTCGAGGAGCTGGCGTACCTGGCGGTGCCGCCCAAGCTGCTGGTTGGGGCAGGACCGTCCCGG
CGGATGTCTCTCAAGATCCGCATTGACAAGTTCACCTCCTGATGACAGGATTG----CACTACGCTTAGTCACTAACTAA
TGCAGGGTTTAGGTTAGTTTGGAAAGGGTCTCGTGCATTGGAGATGATGGATTTTGGTTGCAATTTAGTAGTGGCACTAC
TTCAACATCAGACCTGGTACTTTGCAAATTTCCAACGGTGAAAACTA-------TTTTGTGGCCGTTGGATTCGAT----
-GCC-----------------TATATGTTTATTAAGAAATTGTTGCATTACTTATAACAAAGTTATGCATTGTCTGAGGG
TTCATAACTTTAGTGCTCTAAGCA-TTTCATTTGCATTTGTGATCTGGGTGTTAATATAGGGCATGAAGAGAACTTACAG
ATAAACTGCTATGTTGTTAAGTCCATGAAGATTACGCATTTTTACCCATGGTTGTTTAGAAAATACTCCCTCGTGAAGAA
ATATAAGAGTGTTAAATGAGTGGAACCGCAAGTTAATAAAGCGAAATAAACATTTTTATACACACATACACATATTCGTC
TAATTATTTGCCGGACCACTCGAACCACCCTTATACGTCAGGCGAATGGCCCGCTCACGAAAATGCGACCCAACCGAACC
CCTCAATCCATCGCTAAAAGCTCGGGATGTCACCACAACCCCACAAATATCCCCTCTCTTTCCGCATCCAGACGAAACCC
TAGCCACTCCACTTCCGCTCCGCACCGATCCGATCCAACCGCGGCTCATCTCCGAGGAACTCCGGCATGGCAAGCAAGGA
TCCGAGTCCGACAACTTCAGATATGTCGACTGGGACCTCGTCCCGTGCGCGGACAAGGAGGAGTTCTTCGTTCGCCTGGC
TTTCCGTCGGTCCAAGGAGGAATCCATCCGAGCTCCATCGTCCGAGTCACTCCGGCGGGAAGCGGGAATTCATTGGGTTC
AACAAGTGGGCGCTGGCGGCTCAAGGCGGCCGACAGCGGTGGCTTAGAAGCTAGCAAGCAATGGTATAGGCGCTCCGCCC
CAGACGTTCCCGGACTGGCCGCGAAACCCCTGCGGT
>chr3A_1
ATTCATGGGACT----ATGCAGGACATCTTATTTTCTACAAGTTTCCCAGCCCTATAATATTTCTTACCCTCTGAACCAA
AGGAGGCCTAAAGACTTTTAGAATATCGGTTAAAGATGTCATGAAAGGGCTGCTCTACCTGGCACCGCATAACTGCCATT
CAATAGAGCAAGAGCTCCTTCCATTGAAAGGGATTCTATACAATTTTTGAAGGATTAGAGTTCTTAGAATTTTTTTTCCT
ATGTTGATTGTCTAATTCATACTAGTGGTTGGGGGCCACCATTACGAGTCGCTTAAGA-GGAAGTTGTGCGGGTGTTCTC
CATCTTAAAAA----------AACCCATCTCCATC----------TAATATAAACTTTCTCGCATTACGGGGCACATCAC
AGCCATCTCAAAAAGAAAAACAAGCCGAGAAAAGCTTTGCTCAAAAAGAAAAAGGGAAAAGTCTCACTCCATCTTCTAAA
AATAATCTCTAAAATGAAAAATCAAAAACTTTCTTAATGGGTTTAATGATAGAATGCGTCATGTGGCATAGCTGGCTGAT
CGCCCTTTCAATGCGCCTTAACGGGTTTAATGATAGAATCATATAGGAAATTTTTATATGCGATTATGTGTACTACAT--
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------------------------------------------------------TTATTAGAAATC---TAGAATCCACT
TTAACCTTCTTTTTACAATTTTTGTTTTCTCTTTTGGCATCAGACATTTTGTGTTAC-TCTCATAGAATTCAAATGGGCG
TGCCACTTTTAATCATGTACTATTTTTCTTGTCACTACGTTGTGAGAATCCTTCGAGTCAACTAGGGCCTAGCACCCTGC
CGCACCCCACGAGCCTAT----CTATGGCTGCGCGGTGCAGCTATGGCAATGGCAGGCACGGCTAGCCACGCACGCCACC
TTTTTACTCCTCCACTGGCCGCTGCCAACCAATAACTCACCAGCTGCCGCTTCTTTTACCGTGCTCACTCCGCTCACTCC
ACCTCTCGCACCCACGCCAGAAACAGGGCCGGGCTTCTTCCAGGATGCAGGTTGCGGCCGGCTGCGAGGGCTCGCCGGCG
GCGACGGAGGGGGGCGACCAGCAGAGCTCCAAGAAGCCGAGGCTGGCCGCCGAGCCACTCCTCCTCCATGCACCGGTGAA
GCAAGAGATGGCCGTGCTCCAAACGGCC---------GGAGACGGGGCCGCGGTCGTGGCGGCGGACCACGGCTCCAGGA
TGGAGATCGCCGTGAAGATGGACGTGACCCTGCTCCATTGCCCCCTCTGCATCACCCCCTTGAAGCCCCCCGTCCTTCAG
GTTCGCCTCCCTCGTTTCTCTCAAGTGTTGGGTTCGATCCGCTACAGCAGCT-AGTATTTGATCTCTCCGGCCGGTCCGC
GCAGTGCAAGGGCGGGCACGTGGCCTGCGGCGGCTGCCTCGTGGAGCCCTGCGCGGAGTGCGGCAGCGCCTTCGACGTCC
GCAGCACGGTGATGGACGCCGTCGTCTCCTCGACCACGGCCGAGTGCGACCACGACGGCTGCGGGCGCTACGTCACCTAC
CACGAGCTCGACGGCCACCGCGGCGAGTGCCCGCACGCGCCCTGCGACTGCGCGGTCCGCGGCTGCGGCTTCGTCGGCCC
GGCGCCGGCGCTCCTCGGCCACCTCACCGCCCTCCACTCGATGCCGGTCCACAACTTCCAGTACGGCAAGGTCCTCGCGC
TCCAGCTGCCGGCGACGCTGGAGCCGCGGGGCCTGCTGGTCGGGGACGAGGACGGCCGCGCGTTCCTCATGGTCGGTGGC
GCGCTCGGCTCCGGCGCGGCCGTGTCGGCGGTGTGCGTCAGGGCGGAGGCCATGCTGTGGCCGCGGTACACGCTCAAGGT
GTGGGCGAGCGGGCCGGCGCCGGCGCCGAACCGCAAGGCCGACACCGTCATGGCGGAGATCGAGGTGGCGAGCAGCAGGG
CGCCCGGCGCCGTCGCCGTCGAGGAGCTGGCGTACCTGGCGGTGCCGCCCAAGTTGCTGGTCGGGGCGGGGGCGGCCCGG
CGGATGTCCCTCAAGATCCGCATTGACAAGTTCACCTCCTGATGACAGGATTGCATGCACTACGCTTAGTCAGTAACCAA
TGCAGGGTTTAGGTTAGCTTGGAAAGGGTCTCGTGCGTTGGAGATGATGGGTTTTGGTTGCAATTTAGTAG---CAGTAC
TTCAACATCAG-------ACTTTGCAAATTTCCAACGGTGAAAACTACTACATATTTTGTGGCCGTTGGATTTGTT----
-GCAAGATGTTTCCATGCCTATATATGTTTATTAAG--------------------------TTATGCATTGTGTGAGGG
TTCATAACTTTAGTGCTCCAAGCATTTTCATTTGCATTTGTGATTTGGGTGTTAGTATAGGTCATGAAGA----------
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------------------------------------
>chr3B_285
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-----------------------------------------------GTCGCTTAAGAGGAAAGTTGTGCAGGCATTCTC
TATCTTAAAAACAACA--------TCATCTTTATCTCAAAAAGTATTAAAAAAACTTTCTCGCATTACAGGG-ACATCAC
AACCATCT----AAAAAAAACAAGCCGAGAAAAGCTTTGCTCAAAAAGAAAAAGGGGAAAGTCTCACTCCATCTTCTAAA
AATAATCTCTAAAATGAAAAATCAAAAACTTTCTTACTACAATGAACC--AGCATGCGCCATGTGGCATAGCTGGCCGAC
TGCCCTTCCAATGCGCCTTAATGGGTTTAATGATAGAATCATATAGGAATTTTTTATCGAAATATGCATGTGACAACCGT
GTGACAGATTGTAAAACTGCCACACCATCTCATCAACGTCCGCGGACACGATCCCGCCTGGCAGCCCCGATTGAACCGCA
CCATTTCGCTTCCCTCGCGCACGATCGTCTCATCATCGTCCGTGGACACGATCCCGCCTAGCAGTTCCGCTTCTCCCACG
CGCGTGATCATGCGATCCTTTTTTCCTCTTCGGGCAAAAAAAATAGCGTTAAGTGGGGTTCAATCCCTCAACCAACAGGT
TCGCATGTAGGCTGACTTCCACTGGGATAATTGCATTCGCATGTGCACAAGCAGATTAGCTAAGTATTCAGGCTGTCAGA
GTTCAGATGGATCCAAACCAAGATTTGATCCATCTCATGCTCGCATAAATAGAAAAGCTTGGGCACTCGCTAAATTAACC
AGCACTTCTATAAACAACTGATTAGTGTCCAAAATTTGCTGCTACTATATATCGGCATCTCAATTTCCGTACATCTCAAC
TTCCGCACTTCTATATTTGTTTTAGCTGATGATGGTAACTTTGGCCTGATGAAAAAATTGTTGAAACATTCCCCTGATAA
CCTCTGTGTAAACAACATGTTAATTTATGCACCGCAAATCTGATAACATATGAACACACACACCATGGTAACTCTGACTG
GGAAAAAAGTTGTTGAATTTTACCATGGTAACTTCTATGTCCATAACATGGAAACTTAAGATCTGCAGATCTGATAACTC
ATATACAAACATAGTGGTAACTTTTTGACCTAAGGAAAAGAGTTGGTGAAACATACTCTTGTAATTTTTGTGTAAAAAGT
CTGGTATTATACGCACCGCGGTGTTGGGAACTTACGTACAAACACCATGGTAAACTTTGACCGGAGAAAAAAAGTTAAAA
ACATACCCTAGTAATTTCTACGTAAATAGCATGGTAATATATGCTTTGCAAACCTAATAACTCAGGTACAAACACCACAA
TTTATAAGCATGCCTTCACCTCCGCGCCCCTCGTGACCACCTAGCTGGCATCACCACCACCTGCGTGTGACAACAACATT
GGCAGGAGCAGGAAGAGACTTCACTCCAAGGCTACATTGCCTAATAGGCTCGCGAAATGTTTGATGAAGTGCGTGTCTGG
TTCTTCCTGGTGTGGATAGTAGTTGTGGTCGAAAATGACATGTGACTTTTGATCAAATAAGATTTTTAAAGCAGTGTAGG
CTTGATGATTTGCATATAAACATCATGATACCTTTTTGACCTGGGGTAAACAAATATTGGAAAATATACCGATGATAATT
TTTGTGTAATAGCATGGTAATATACGCATCGCAGACTTGATAACTTACGTCCAAAACATCACGAAAATTTTTGACCTGGG
AAAAAAATACCGTTGAAACAATACTCTGATAATTTTTATGTAAAAAACATGGTTTTTAAGCAACCCTGACCTAATAACTT
ACAAACAAAATCATGTTGATTTTTTGACCTCGGACTTTTTTGTTTGAAACATGCCTGGTAATTTCTATGTAAATAACATG
GTGATATAAACTCCAATAACCGATAGCTTAGATACAAACATGGTAACTTTTGACCCAGGAAACTTTTTGTCGAGAAACAC
GTAGTCGCTAGCTTATGTGTAAATAGTATGCCAATATACCTCCCAGGTACTCGATAATTTACGAATAAAACACCACGGTA
ACATTAACCAAGGGATGAAAAAGTTGTTCAAAAATATACTTGCGAGAACTTTTGTGAAAATAGCATGCTAATATACGAAC
CGTTCACCTGATAACTTGCGTACAAACAACACCGTAAATTTGACGAAGAGGGGAACAATTGTTGAAAAATATACCTGGTA
ATTTTTATGTAAATAGCATGGTCATATAAGAATTCAATACTGATAAGTTAAGTACAAACACCACCATGACATATTTGACC
ATGGAGGAAAAAGTTGCTAAAAAATATAGCACGATAACTTCTATATAAATAGCATGGTAATATAAGAATTCCATACCTGA
TAACTTAAGTACAAACACCGTGGTAACATTTTTGACTAAGGAGGAAAAAGTTGCTGAAAAGTATAGCACCATAATTTCTA
TGTAAATTGCATGGTAATATAAGAATTTCATACCTGATAACTTAAGTACAAACACCGGGGCAACATTTTTGACCAAGGAG
GAAAAAGTTGCTAAAAATATAGCACGTTAGCTTAAGTACAAACAGCACGGTAACATTTTTGAACAAGGAGAAAAAAGTTC
CGGAAATATATAGCACGGTATTTTCTATATAAATAGCATGGTAATATACAAACCTCATACCCGATAAATTTAGTCCAAAC
ACTGCGGTAACATTTGACCAAGAGGGAAAAAATTATTGAAATACATACTCCACAACTACTATGTAAACAGTATGGTAATA
TGCGAACCTCATGTTTGATAATTTAAGTACAAACACTATGGTGATTTGTGAACCATCTACCGGTGTAAAACGTTCAGAAA
AAAAGTTCCAAATCCTAGACGAGTCTGTCTGTTTGAATTTTCAATTTCATTCAATCTCATTTCAGGAAGGTACAAGTAGC
GTGTAAGTTGAAAGAAACCAATAACGTGGTGTAGCCCAGTTGGTTGTTGTTGCTAAATTAGTTGTGATAGATTGTGGGTT
CAATTCCCCTCCCATTGCATTTTATTTTCGCTTTTTTTCAAGCTGCAAATGTATGTGAGCAGAATCGGGACAGGCCCGCC
CCCAGCAGGGGGATCCGGGTGGCCCAGAAAATCGGGAGAAGGGAGAGGTTCGTGCGGGGGATCCGGATGGGACAGGCCCG
CCCCCAGCAGGGGGATCCGGGTGGCCCAGAAAATCGGGAGAATGGAGAGGTTCGTGCGGGGGATCCGGATGGCCCAGAAA
ATCGGGAGAAGGGAGAGGTTCGTGCGGGGGGAACGGGATGGCCCAGAAAATCGGGAGAAGAATGGATGGGTTTCGTGCTG
CACGAGGGGGTGGGGTGGTTTTCGCAATCTGGCACACGGTTGCCAGTTATCACATTATTAGAAATC---TAGAATCCACT
TTAACCTTCTTTTTACAATTTTTGTTTTCTCTTTTGGCATCAAATATTTTGTGTTA-ATCCCATAAAATTCAAATGGACG
TGCCACTTTTAATCATGT---ATTTTTCTTGTCACTACGTTGTGAGAATCCTTCGAATCAACTAGGGCCTAGCACCCTGC
CGCACCCCACGAGCCTAT----CTACGGCTGCGCGGTGCAGCTATGGCAATGGCAGGCACGGCTAGCCACGCACGCCACC
TTTTTACTCCTCGACTGGCCGCTGTCAACCAATAACTCACCAGCTGCTGCTTCTTTTACCGTGCC---------CACTCC
ACCCCTCGCACCCACACCAGAAACAGGGCCGGGTTTCTTCCAGGATGCAGGTTGCGGCCGGCTGCGAGGGCTCGCCGGCG
GCGACGGAGGGGGGCGACCAGCAGAGCTCCAAGAAGCCGAGGCTGGCCGCCGAGCCACTCCTCCTCCATGCACCGGTGAA
GCAAGAGATGGCCGTGCTCCAAACGGCC---------GGAGACGGGGCCGCGGTCGTGGCGGTGGACCACGGCTCCAGGA
TGGAGATCGCTGTGAAGATGGACGTGACCCTGCTCCATTGCCCCCTCTGCATCACCCCCTTGAAGCCCCCCGTCCTTCAG
GTTCGTTTCACTCGTTTCACTTCGGTTCGATTCGAC-TCCGCTACAGCAGCT-AGTGTTTGATCTCTCCGGCCGGTCCGC
GCAGTGCAAGGGCGGGCACGTGGCCTGCGGCGGCTGCCTCGCGGGGCCCTGCGCGAAGTGCGGCGGCGCCTTCGACGTCC
GCAGCACGGTGATGGACGCCGTCGTCTCCTCGACCACGGCCGAGTGCGACCACGACGGCTGCGGGTGCTACGTCACCTAC
CACGAGCTCACAAGTCACCGCGGCGAGTGCCCGCACGCACCCTGCGACTGCGCGGTCCCCGGCTGCGGCTTCGTCGGCCC
GGCGCCGGCGCTGCTCGGCCATCTGACCGCCCTCCACTCGATGCCGGTCCACAGGGTGCAGTACGGCAAGGTCCTCGCGC
TCCAGCTGCCAGCGTCGCTGGAGCCGCGGGGCCTGCTGGTCGCGGACGAGGACGACCGCGCGTTCCTCATGGTCGGCGGC
GCGCTCGGCTCCGGCGCGGCCGTGTCGGCGGTGTGCGTCAGGGCGGAGGCGATGCAGTGGCCGCGGTACACGCTCAAGGT
GTGGGCGAGCGGGCCGGCGCCGGCGCCGAACCGCAAGGCCGACACCGTCATGGCGGAGATCGAGATGACGAGCAGCACGG
CGCCCGGCGCCGTCGACGTCGAGGAGCTGGCGTACCTGGCGGTGCCGCCCAAGTTGCTGGCTGGGGCGGGGGCGTCCCGG
CGGATGTCTCTCAAGATCCGCATTGACAAGTTCACCTCCTGATGACAGGATTG----CACTACGCTTAGTCACTAACCAA
TGCATGGTTTAGGTTAGTTTGGAAAAGGTCTCGTGCATTGGAGATGATGGATTTTGGTTGGAATTTAT------CAGTAC
TTCGACATCGGACCAGGTGATTTGCTAATTTCCAACGGTGAAAACTG-------TTTTGTGGCCGTTGGATATGTTTGGA
TGCC-----------------TATATGTTTATTAAGAAATTGTTGCATTGC-----------TTATGCATTGTGTGAGGG
TTCATAACTCTAGTGCTCTAAGCATTTTCATTTGCATTTGTGATCTGGGTGTTAGTATAGGTCATGAAGA----------
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>SNPs
------------SSSS-------------------------------S--------S-----------------------
-----------------------S----------------S----------------------------S----------
--------S----S-----------S--------------SS---------------S--S-------------------
-------------S----------------S---------S---S-----S-----------------------------
------S----S--S-SSSSS--------------SS-----SSS---------SS--S--------S-S----------
--------------------------SSS------------S-----SSS------------------------------
-S-------S--------------------S------S---SSS-----------------S------------------
--------S----S-----S---------------------------------------S--------------------
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------------------------------------------------------------------SSS-----------
--------------------------------------------------------S-----------------------
-------------------------------------------------------S-----S------------------
--------SSSSSSSSSSSSSS----------------------------------------------------------
------------------------------------------------S-------------------------------
---------------------S---------------------------------------------------S------
--------------------------------------------------------S-------------SS--------
-----------S-----S----S-----SSSSSSSSS-----------------S--------------------S----
------------------------------------------------------S----S--------------------
----------------S-----------------------------------S---------------------------
------------------S-----------------------------------------S-----------------S-
------S---------------------------------------------------S--------------S------
-------------------------------------------------------------------------S------
-------------------------------------------------S-------------------------S----
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S----------------------------------------------------S-------------S--SS--------
-----------------------------------------------------------------------------S--
-----------------------------------------------------------------------SSS--S---
--------------S---------------------------------------------------------S-S-----
-------------------------------------------------S-SSSSSSSSSSS-----------S------
------------------------------------------------------S------S--------SSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
>forward_327
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-------------------------------------------------------------------TGCGGGCATTCTC
CATCTTC-------------------------------------------------------------------------
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>reverse_4236
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---------------------------------------------------------------------------TAGGA
TGGAGATCGCCGTGA-----------------------------------------------------------------
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>forward_4172
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------------------------------------------------------------------------CCGGTGAA
GCAAGAGATGGT--------------------------------------------------------------------
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>reverse_5862
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---------------------TATGTCGACTGGGACCTCGT---------------------------------------
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------------------------------------
