>input_sequence_62457
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----------------------------------------------------------------------------CCTC
AACAACAAAGTTTCATGTCTGATCTCGACGTTACTCTGCCATCTGCCTTCGGTATGCTTCCATCACTCACATCCATGCCT
GTTGCTTCTCATGAAATAAATGCTAAATTGGACATTCTGTAGTTTGATGTATATAATTT-GTCACTTTGAGCTTCTCAAA
ACTTGT-TGTAGTAAAAAAATTGGGAAATTTGAGTGTAGTCAGTCACTTGAT-CATCCTAAACAATGGTTCGGTGTTCAA
TCTGGTCCCCCTTTCATGATACT-TCATGTTGCTCATCTTGACCTTAGTATGTACATGAGCTCTGCCTACATGTTTCCTG
ACATGGTGTCACCCTTTGTAGATCCTTTTGCTGAGGCAAATGCTGAGGATGCTGGTGCAGGCCCCGGCGCAAAAGATTAT
GTGCATGTGCGCATCCAGCAGCGCAACGGCAGGAAGAGTCTGACCACTGTCCAGGGCCTGAAGAAGGAGTTCAGCTACAA
CAAGATCCTCAAGGATCTCAAGAAGGAATTCTGCTGCAATGGCACAGTAGTCCAGGATCCGGAGCTAGGCCAGGTATGAT
ACAGCCGGCCGTGCTTCAATTGC------TTCTCAATTCTCTGCCTGATGTTGGTACACTGACTAGAATTTAACTG-TCT
GCAGGTCATTCAGCTTCAGGGTGATCAGCGTAAGAATGTTGCTACTTTCCTAGTCCAGGTAACTATTCGACTTCTCCCAA
GATGAACATCATTTATCATTCTGTCAAATGTTTCTGTGACTGATCATATCGTCCTTTCTGTTTTGCAAAGGCTGGGATTG
CGAAGAAGGAGCTCATCAAGATCCACGGCTTCTAAGCCGAAGCCGCCTCCGATAAATGCTCGAACCGCCAGCCGGCTCTT
CTCTATATTGAAGGCATAAGGCATATATATATTGCCGCCCGCTTGTCGAACT-GTGTCTTGCTTGATGCAAGTTGTGTTG
TCGCCTGATTATTATGCTGCTGCTGTACCGGCATATCAGTATGGTTTGTCTA-AGATGTTGCCGACTGAATAAAAATCCG
TATCGTTT------------------------------------------------------------------------
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>chr1B_1_TraesCS1B01G329300
CTTTTTCCGGATGGGTCGGAGGGAATCCAGAACCCTAGAGCCGTGTACAGCTCCTCCCCCCTGTCCCTCTCTCTGCATAA
GGCGGTTTGCCTAATTATACGTTTCCTCCCACTATAAGTGCGCGACACCTCCCGGCCGGCCAAGCTCACATCCGCCTCTC
TCTCTCTCTCTCTTTCTCTCTCGCACCGCACCGCACCGCACCGCGTCCCCTCCCTCTCCTGTCGCGTGCGCTCGGCCAGC
-AAAAGGTAACCACCCGCTTTCCTCTCCCCGATTAAATCCGCGTGCTAGCTTCCTCCAAGATTTGGGGATCTTTAGGCGT
CTCGTCGCGGG--CTCTCGATCGCTCCGCGCTCCTGCGGTTAGTGTTTCCGGAGGCCGGCGGATCTAGCGGCG-------
-GGGGCGTGGGGGG-ATTTTTGGTGCCCGGATGTGACGCGATTTTTTCTCGATTTCGCGTTCGTGGAGTCTGAGAAGTCG
GTGTGGATGAGGCGATCTGTGCCGGTTTAGTTGTCGGCTGGTCAGACTCTGGGAC--ATTTCTTATCTTGGTGATTAAAA
AAGTTGGGGAATTATTATTTTTACGGATCGATGGTTGTTCTCGCGATCTGTTGTGCCAGAACTCCGTATATAGCTTAGGT
TGATGCGATTCGTTCGCGTATGGGAGAACTTGGTCTCGTTAGTGGCTGGGAAATGGTTAGATGCGTCGATTTGTGGCACC
ATGCGCATCTCGGATTCCTGTAATCCTCGGGAGAGTTTCATCTCTGTTCATCTGTTAACGGAGAGGTCTGTAGATCTGTT
GAACTGT--------TTCGTTTTGGTCGATGAAGCTGCTAGGTTTCGGTCAGGCA----------TGAGGGTACCTGGTT
TGCCTCGGCCCTGCATAT--GGCTTTCACTTGTTATTTGTTTCTCAACGTTTAGTCATC--ATTTATTGAATGGCATGTG
AAGGATGTTGTGATTTTGTGCAGCTTCCACATAAAGGCCAACAAGAGAAACCTTAATCTGTTGGGTGCCAGTCAAACCTC
AACAACAAAGTTTCATGTCTGATCTCGACGTTACTCTGCCATCTGCCTTCGGTATGCTTCCATCACTCACATCCATGCCT
GTTGCTTCTCATGAAATAAATGCTAAATTGGACATTCTGTAGTTTGATGTATATAATTT-GTCACTTTGAGCTTCTCAAA
ACTTGT-TGTAGTAAAAAAATTGGGAAATTTGAGTGTAGTCAGTCACTTGAT-CATCCTAAACAATGGTTCGGTGTTCAA
TCTGGTCCCCCTTTCATGATACT-TCATGTTGCTCATCTTGACCTTAGTATGTACATGAGCTCTGCCTACATGTTTCCTG
ACATGGTGTCACCCTTTGTAGATCCTTTTGCTGAGGCAAATGCTGAGGATGCTGGTGCAGGCCCCGGCGCAAAAGATTAT
GTGCATGTGCGCATCCAGCAGCGCAACGGCAGGAAGAGTCTGACCACTGTCCAGGGCCTGAAGAAGGAGTTCAGCTACAA
CAAGATCCTCAAGGATCTCAAGAAGGAATTCTGCTGCAATGGCACAGTAGTCCAGGATCCGGAGCTAGGCCAGGTATGAT
ACAGCCGGCCGTGCTTCAATTGC------TTCTCAATTCTCTGCCTGATGTTGGTACACTGACTAGAATTTAACTG-TCT
GCAGGTCATTCAGCTTCAGGGTGATCAGCGTAAGAATGTTGCTACTTTCCTAGTCCAGGTAACTATTCGACTTCTCCCAA
GATGAACATCATTTATCATTCTGTCAAATGTTTCTGTGACTGATCATATCGTCCTTTCTGTTTTGCAAAGGCTGGGATTG
CGAAGAAGGAGCTCATCAAGATCCACGGCTTCTAAGCCGAAGCCGCCTCCGATAAATGCTCGAACCGCCAGCCGGCTCTT
CTCTATATTGAAGGCATAAGGCATATATATATTGCCGCCCGCTTGTCGAACT-GTGTCTTGCTTGATGCAAGTTGTGTTG
TCGCCTGATTATTATGCTGCTGCTGTACCGGCATATCAGTATGGTTTGTCTA-AGATGTTGCCGACTGAATAAAAATCCG
TATCGTTTGGCTATGGCTCTGGTTTTGGTCCCAAGTTTCGTTTCCTTC-GTTGTCGTGATCGTGGAGCTTGTTTGTTTGG
TTGTTCGTCTGATGAGCCTAATGTGCTGCGTGCTGATTGCTACTGCTCCAGTATCTGCCGATTCTTGGCCCGCGTTGTTT
TGTCGGATCCGTAGTCGGCAGAAGCATCCGGGCACAAAACAAATCAATAGGTCG-CAGACAACGACGAGTCATCTGAGAC
CACACCGCTAAGGGGAAGCTTATCTGAAGGCGCTAGCTCGACACTGTAGTTAACCATGTGCTCCCGCGTGCACTGCTCTC
AGATTCCAAACGTTAATCATCTGTCAGCAAAACTACAGAA--CGTATAGTCACTGCAAAGTCACGGGGTCATCTACTGTC
TACTGAACTCAGAGCATCTCCTGCCGCGCCCCAACAGGCAGAACGGGGCGCCGGCACAAGCGAAAAGGG-CGCGTGGGTC
CGCCTTGTCAGCGAGTCGAGCGCCTTTTCACGCCGTTTCTTTTCAC-TTTTCCAAC-ACTCCCCTCCCAATTACTCCTTT
CCTCCCGTCATTCT--CCCTCCCGCTCGCCTCCCAGCCGGCCGCCAAGCCACCGAAGAAGTACGCCGTCCCCCGCGCCGC
GGCGACCGCGATCGCCTCCGTCGACCAGCCGAAGCCGAG--GA------------------CGCCGCCGCCCAAGCCGCC
GGGCATGTCAAACGCCGACTGGAGGGTGGAAGTACAGCGACGGGAGGCCGTCATCTCCGACCGACGGAACAGGGCTCTCG
CAAAGAAGGCCCGTGACAACGCGGCGCGCGCAGCTGC------------GGGTGCCGCTGCCGCTGCCGCT------GAC
CAGGCCGAGGCTGAGGCGACTCGCACGGGGATGATGAA-TCCCCTGGCAACCACGTGCAGTACGCGCCCTGGGGCCAGCA
AGGCATCGG-GTCTCCGATGCCGCAGCCATGGGGGTCGCC------GGGCTACGCCGACGGGGACGCACACGGTGGGTTC
AACCCAAACATCACTTTTCCCCA
>chr1D_3
--TTTTCTGGATGGGTCGGAGGGAATCCAGAACCCTAGAGCCGTGTACAGCCC-----------CCCTCTCTTTGCATAA
GGCGGTTTGCCTAATTATACGTTTCCTCCCGCTATAAGTGCGCGACGCCTCCCGGCCGGCCAAGCTCACATCCGCCTCTC
TCTCTCTCTCTCTCTCTCTCTCCTCT-------CACCGCACCGCGTCCCCTCCCTCTCCTGTCGCGTGCGCTCCGCCAGC
-AAAAGGTAACCACCCGTTTTCCCCTCCCCGATTAAATCCGCGTGCTAGCTTCCTCCAAGATTTGGGGATCTTTAGGCGT
CTCGTCGCGAGCTCTCTCGATCGCTCCGCGCTCCCGCGGTTAGTGATTCCGGAGGCCGGCGGATCTGGCGGCG-------
-GGGGCCTGGGGGAAATTTTTGGTGCCCGGATTTGAAGCGATCTGTTCTTGATTTCGCGTTCGTGTCTGCTGAGGAGTCG
GGGTGGGTGAGGCGATCTGTGTCGGTTTAGTTGTCGGGTGGTCAGGCTCTC--GGGAATTTCTTATCTTGGTGATTAAAA
AAATTGGGGGATTAAT-TTTTTACGGATCGATGGTTATTCTCGTGATCTGTTCCGGTAGAACTCCGTGTATAGCTTAAAT
TGACGCGATTCGTTCGCGTACGGGAGAACTTGGTCTCGTTATTGGTGGGGAAATGTTTCGATGCGTCGATTTGTCGCGCT
ATGCGCATCTCGGATTCCCGTAATCCTC-GGAGAGTTTCATCTCTGTTCATCTGTCCCCCG--------GGAGGTCTGTA
GATCTGT--------TTCGTTTTGGTCGATGAAGTTACTAGGTCTCGGCTAGGCA----------CGAGGGTGCCTGATT
TGCTTAGGTCCTGCATAT--CGCTTTCAGTTGTCATTTGTTTC----CATTTAATCATCAAATTCAATGAATGGCATGTG
ATGGATATTGTGATGCTGCGCAGCTTCCACATAAGGACCAACAAGAGAAACCTTAATCTGTTCGGTGCCAGTCAAACCTC
AACAACAAAGTTTCATGTCTGATCTCGACGTTACTCTGCCATCTGCCTTCGGTATGCTTCCATT----GCATCCATGTCT
C--GCTTCTCATGAAATAAATGCTAAATTGAACATTCTGTAGTTTGATGTATGTAATTTAGTCACTTTGAGCTTCTCAAA
ACTAAATTGT-------------------------------AGTCACCTGAT-TATCCTAAACAAGGGTTTGGTGTTCAA
TCTGGTCCCCTTGTTATGATACTTTCATGTTACTCATCGTGACCTTGGTATGTACATGAGCTCTACCTACATGTTGTCTG
ATATGGTGTCTTCCTCCGTAGATCCTTTTGCTGAGGCAAATGCTGAGGATGCTGGTGCAGGCCCCGGCGCAAAAGATTAT
GTGCATGTGCGCATCCAGCAGCGCAACGGCAGGAAGAGTCTGACCACTGTCCAGGGCCTGAAGAAGGAGTTCAGCTACAA
CAAGATCCTCAAGGATCTCAAGAAGGAATTCTGCTGCAATGGCACAGTAGTCCAGGATCCGGAGCTAGGCCAGGTATGAT
ACTGCCGGCCGTGCTTCAATTGC------TTT-------TCGGCCTGATGCTGTTATACTGACTATGATTTGCCC--TCT
GCAGGTCATTCAGCTTCAGGGTGATCAGCGTAAGAATGTTGCTACTTTCCTAGTCCAGGTACCTTC-CGACGTCTAACAA
GACGAACACCATTTATCATTCTGTCAAACGTTCTTGTGACTGATTATACCATCCTTTCTGTTTTGCAAAGGCTGGGATTG
CGAAGAAGGAGCTCATCAAGATCCACGGCTTCTAAGCCTTAGCCGCCTCCGATAAATGCTCGAACCGCCAGCCAGTTCTT
CTCTATATTGAAGACATAAGGCATATATAC--TGCCGCCCGCTTGTTGAACC-GTGTCTTGCTTGATGCAAGTTGTGTTG
TCACCTGATTACTATGCTGCTGCAGTACCAGCATATCAGTATGGTTTGTCTA-AGATGTTGCCGACTAAATAAAAATCTG
TATCGTTTGGCTATGGCTCTGGTTTTGGTCCCAAGTTTCGTTTCCTTC-GTCGTCGCGATCGTGGA---TGTTTGTTTTC
TTGTTCGTCTGATGAGCCTAATGTGCTGCGTGCTGGTTGCTACTGCTCCAGTATCTGCCGATTCTTGGCCCACATCGTTT
TGTCGAATCCTTAGTCGGCAGTAG--------------------------GTCG-CAGACAAGGACGAGTCATCTGAGAC
CACACCGCTAAGGGGAAGCTTATCTCATGGCGCTGGCTCGACACTGTAGTTAACCATGTGCTCCACGTTTACTGTTCC-C
AGATTCCAAACGTTAATCATCTGTCAGCAAAACTACAGAAAGCGTATAGTCAATGCGAAGTCACGGGGTCATCTACTGT-
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-----------------------
>chr1A_3
--TTTTCTGGATGGGTCGGAGGGAATCCAGAACCCTAGAGCCGTGTACAGCTCCTCCCC---------CTCTCTGCATAA
GGCGGTTTGCCTAATTATACGTTTCCTTCCACTATAAGTGCGCGACACCTCCCGGCCGGCCCAGCTCACATCCGCCTCTC
TCTCTCTCTCCT------------------------CGCACCGCGTCCCCTCCCTCTCCTGTCGCGTGCGCTCGGCCAGC
AAAAAGGTAACCATCCGCTTTCCCCTCCCCGATTAAATCCGCGTGCTAGCTTCCTCCAAGATTTGGGGATCTTTAGGCGT
CTCGTCGCGAGCTCTC--GATCGCTCCGCGCTCCCGCGGTTAGTGATTCCGGAGGCCGGCGGATCTCGCAGCTGTAATAG
CGGGGACTTGGGGG-GATTTTGGTGCCCGGATTTGATGCGATTGGTTGTCGATTTCGTGTTCGTGGCTGCTGAGGAGTCG
GGGTGGATGAGGCGATCTGTGTCGGTTTAGTTTTCGGCTGGTCAGGCTTTGGGGGGAATTTCTTATCTTGGTGATTAAAA
AGATTGGGGAATT-AT-TTTTTACGGATCGATGGTTATTCTCGCGATCTGCTCTGCTAGAACTCCGTATATAGCTTAAAT
TGACGCGATTCGTTCGCGTATGGGAGAACTTGGTCTCGTAGAGTC-GGGGAAATGGTTAGATTCGTTGATTTGTCGCACT
ATGCGCATCTCGGATTCCTGTAATCCTC-GGACAGTTTCGTCTCTGTTCATCTGTTTCCTG--------GGAGGTCTGTA
GATCTGTTGAACTGCTTCGTTTTGGTCCATGAAGTTACTAGGTCTCGGCTAGGCGCGGCTAGGCGTGAGGGTACCTGATT
TGCTTCGGTCCTGCATATATCGCTTTCACTTGTTATTTGTTTCTCAACATTTAATCATC--ATTTATTGAATGGCATGTG
ATGGATGTTGTGATTTTGTGCAGCTTCCACATAAAGGCCAACAAGAGAAACCATAATCTGTTGGGTGCCAGTCAAACCTC
AACAACAAAGTTTCATGTCTGATCTCGACGTTACTCTGCCATCTGCCTTCGGTATGCTTCCACT----ACATCCATGTCT
GTTGCTTCTCATGAAATAAATGCTAAATTGAACATTCTGTAGTTTGATGTATATAATTT-GTCACTTTGAGCTTCTCAAA
GCTTCACTGTAGTAAAAAAATTTGGAAATTTGTGTGTAGTCACCTGATCATCCTATCCTAAACAAGGGTTTGGTGTTCAA
T-----------------------------TGCTCATCGTGACCTT-GTATGTACATGAGCTCTGCCTACATCTTCTCTG
ACATGGTTTCTTCCTTTGTAGATCCTTTTGCTGAGGCAAATGCTGAGGATGCTGGTGCAGGCCCGGGCGCAAAAGATTAT
GTGCATGTGCGCATCCAGCAGCGCAACGGCAGGAAGAGTCTGACCACTGTCCAGGGCCTGAAGAAGGAGTTCAGCTACAA
CAAGATCCTCAAGGATCTCAAGAAGGAATTCTGCTGCAATGGCACAGTAGTCCAGGATCCAGAGCTAGGCCAGGTACGAT
CTCAGATACTTTAACTTACTTCCATCTAGTTCTCAATTCTCT-CCCGGTGTTGGTATACTGACTAGATAATTCATCTTCT
GCAGGTCATTCAGCTTCAGGGTGATCAGCGTAAGAATGTTGCTACTTTCCTAGTCCAGGTATCTTC--GACATCCAACAA
GATGAACACCATTCATCATTCTGTTAA-TGTTTCTGTGCATAATCACTTGTCCCCTTTCTCCTCTGCTAGGCTGGAATTG
CGAAGAAGGAGCTCATCAAGATCCACGGCTTCTAAGCTGAAGCCGCCTCCGATAAATGCCCGAACCGCCAGCCGGTTCTA
CTCTATATTGAAGACTTAAGGCATCTATA--TTGCCGCCCGCTTGTTGAACCGGTTTCTTGCTTGATGCAAGTTGTGTTG
TCACCTGGTTATTATGCTGCTGCTGTACCAGCATATCAGTATGGTTTGTCTAAAGATGTTGCCGACTAAATAAAAATCCG
TATCGTTTGGCTATGACTCTCATTTTGGTCCCAACTTTCGTTTCCTTCCGTTGTCGTGATTGTGGA---TGCTTGTTTGG
TTGTTCGTCTGATGAGCCTAATGTGCTGCACGCTGGTCGCTGATGTG------------------TGGTCCGTGTCGTCT
TGGCGGACCCGTAGTCGGCAGAAGCATCC-GGCACGAACCAAATCTGTAGCTCGTCAGACAAGGACGAGTCGTCTGACAC
CACACCGCTTAGG-------------------------------------------------------------------
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>chr1B_2472
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--------------------------------------------GGGGCGCTGGCACAAGCGAAAAGGG-CGCGTGGGTC
CGTCCCGTCGGTCAGTTGAGCGTCTCTTCCCGCCGTTTCTTCCCGC-TTTTCCCCC-ACTCCCCTCCCATTTGCTCCTTT
CCTCCCGCCATTCT--CCCTCCCGCTCGCCTCCCACCCGGCCGCCATGCCACCGAAGAAGTACGCTGTCCCCCGCGCCGC
GGCGACCGCGACCGCCTTCATCGCCA-----------AGCCGATGCAGAGGG---------CGCCGCCGTTCAAGCCGCC
GGGCATGTCAAACGCCGATTGGAGGGTGGAAGTACAGCGACGAGAGGCCGTCACCGCCGACCGGCGCAACAGGGCCCTCG
CCAAGAAGGCC-GTGACAACGCGGCGCGCGCGGCTGC------------GGGTGCCGCTGCCGCT---------------
---GCCGAGGCCGAGGCGACTCGCGCGGGGATGATGAA-CCCCCCGGCAACCACGCGCTGTTCGCGCCCTGGGGCCAGCA
GGGTGTCGG-GTCTCCGACGCCGCAGCCATGGGG-TCGCC------GGGCTACACCGACGGGGACGCACACGGTGGGTTC
AACCCAAACGTCACTTCCCCCA-
>chr2B_2472
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--------------------------------------------GGGGCGCCGGCTCAAGCGAAAAGGG-CGCGTGGGTC
CGCCCTGTCGGCGAGTCGAGCGCCTCTTCCCGCCGTTTCTTCCCCGC-TTTTCCTC-ACTTCCCTCCCATTTGCTCCTTT
CCTCCCACCATTCT--CCCTCCCGCTCGCCTCCCAGCCGGCCGCCATGCCACCGAAGAAGTACGTCGTCCCCCGCGCCGC
GGCGACGGCGACCGCCTCTGTCGCCCAGCCGAAGCAGAG--GAAGTCGAGGG---------CGCCGCCGTCCAAGCCGCC
GGGCATGTCAAACGCCGAATGGAGGGTGAAAGTACAGCGACGGGAGGCCGTCACCGCCGACCGGCGGAACAGGGCCCTCG
CCAAGAAGGCCCGTGACAACGCGTTGCGCGCGGCTGC------------GGGTGCTGCTGCCGCTGCCGCTGCCTCTGAC
CAGGCCGAGGCCGAGGCGACCCGCGCGGGGATGATGAATCCCCCCGGCAACCACGCGCAGTACGCGCCCTGGGGCCAACA
AGGCGTCAG-GTCTCCGACGCCGCAGCCATGGGGGGCGCC------TGGCTACACCGAGGGGGACGTGCACGGTGGGTTC
AACCCAAACGTCACTTTCCCCCA
>chr2B_2472
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--------------------------------------------GGGGCGCCAGCACAAAAGAAAAGGG-CACGTGGGTC
TGCCCTGTCGGTGAGTCGAGCGCCTCTTCCCGCCGTTTCTTCCCCGC-TTTTCCCC-ACTTCCCTCCCATTTGCTCCTTT
CCTCCCGCCATTCT--CCCTCCCGCTTGCCTCCCAGCCGGCCGCCATGCCACCGAAGAAGTACGCCGTCCCCCGCGCCGC
GGCGACCGCGACCGCCTTTGTCGCCCAGCCGAAGCAGAG--GAAGCCGAGGG---------CGCCGCCGTCCAAGCCGCC
GGACATGTCAAACGCCGAATGGAGGGTGGAAGTACAGCGACGGGAGGCCGTCACCGCCGAACGGTGGAACAGGGCCCTCG
CCAAGAAGGCCCGTGACAACGCGGCGCGCGCGGCTGC------------GGGTGCCGCTGCCGCT------------GAC
CAGGCCGAGGCCGAGGCGACCCGCGCGGGGATGATGAATGCCCCCGGCAACCACGCGCAGTACACGCCCTGGGGCCAAGA
AGGCGTCGG-GTCTCCGACGCCGCAGCCATGGGGGTCGCC------GGGCTACACTGACAGGGACGCGCACGGTGAGTTC
AACCAAAACGTCACTTTCCCCCA
>chr2B_2472
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--------------------------------------------GGGGCGCCGGCACAAGTGAAAAGGG-CGCGTGGGTC
CGTCCTGTCGGTGAGTCGAGTGCCTCTTCCCGCCGTTTCTTCCCGC-TTTTCCC-C-ACTTCCCTCCCATTTTCTCCTTT
CCTCCCGCCAGTCTCCCCCTCCCGCTCGCCTCCCAGCCGGCCGCCATGCCGCCGAAGAAGTACGTCGTCCCCCGCGCCGC
GGCGACCGCGACCGCCTTCGTCGCCCAGCCGAAGCAGAG--GAAGCCGAGGG---------CGCCGCCGTCCAAGCCACC
GGGCATGACAAACGCCGATTGGAGAGTGGAAGTGTAGCGAAGGGAGGCCGTCACCGCCGACCGGCGAAACAGGGCCCTCG
CCAAGAAGGCCCGTGACAATGCAGTACGCGCGGCTGCCGCTGCCGCTGCCGCTGCCGCTTCGGCG------------GAC
CAGGCCGAGGCCGAGGCGTCTCGCGCGGGGATGATGAATCCACCCGGCACCCACGCGCAGTACGCGCCCTGGGGCCAGCA
AGGCGTCGG-GTCTCCGTCGCCGCAGCCATGGAGATCGTCTTCGCCGGGCTACGCCGACGGGGACGCGCACGGTGGGTTC
AACCCCAACGTCACTTTCCC---
>chr7B_2472
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--------------------------------------------GGGGCACCGGCACAAGCGAAAAAGA-CGTGCGGGTC
CGCCCTGTCGGCGAGTCGAACGCCTCTTCCCGCCGTTTCTTCCCGC-TTTTCCC-CCACTTTCCTCCCATTTGCTCCTTT
CCTCCCGCCATTCTCCC--TCCCACTCGCCTCCCAGCCGGCCGCCATGCCACTGAAGAAGTACGCCGTCCCCCGCGCCGC
GGCGACCGCGACCGCCTACGTCGCCCAGCCGAAGCAGAG--GAAGCCGAGGG---------CGCCGCCGTCCAAGCCGCC
GGGCATGTCAAACGCCGATTGGAGGGTGGAAGTACAGCGACGGGAGGCCGTCACCGCCGACCGGCGGAACAGGGCCCTCG
CCAAGAAGGCCCGTCACAATGCGGCGCGCGTGGCTGC------------GGGTGCTGCTACCACTGTCGCTGCCGCTGAC
CAGGCCGAGGCCGAGGCGACTCGCGCGGGGATGATGAATCCCCCCGGCAACCACGAGCAGTACGCGCCCTGGAGCCAGCA
AGGCGTCGG-GTCTCCGACGCCGCAGCCATGGGGGTCGCC------AGGCTATGCCGACGGGGACGCACCCTGTGGGTTC
AACCCAAATGTCACTTTCCC---
>chr3D_2472
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--------------------------------------------GGGGCGCCGGCACAAGCGAAAAGGG-CGCGTGGGTC
CGCCCTGTCGGCGAGTCGAGCGCCTCTTCT-GCCGTTTCTTCCCGG-TTTTCCC-C-ACTTCCCTCCCATTTTCTCCATT
CCTCCCGCCAATCT--CCCTCCCGCTCGCCTCCCAGCCGGCCGCCATGCCACCGAAGAAGTACGTCGTCCCCCGCGCCGC
GGCAACCGCGACCGCCTCCGTCGCCC-----------AG--GAAGCTGAGGG---------TGCCGCCGTCCAAGCCCCC
GGGCATGACAAACGCCGATTGGAGGGTGGAAGTTCAGTGACGGGAGGCTGTCACCCCCGACTGGCAGAACAGGGCCATCG
CCAAGAAGGCCCGTGACAACGCGGCACGCGCGGCTGC------------GGCTGCCGCTTCGGCG------------GAC
CAAGCCGAGGCCGAGGCGACTCGCGCGGGGATGATGAATCCACCCGGCAGCCACACCCAGTACGCGCCCTGGGGCCAGCA
AGGCGTCGG-CTCTCCGTCGCCGCAGCCATGGGGATCGCCCTCGCCGGGCTACGCCAACGGGGACGCGCACGGTGGGTTC
AACCCAAACGTCACCTTCCCCCA
>chr3D_2472
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--------------------------------------------GGGGCGCCGGCACAAGCGAAAAGGG-CGTGTGGGTC
CGCCCTG-CGGTGAGTCGAGCGCCTCTTCCCACCGTTTCTTCCCGC-TTTCCCC-C-ACTTCCCTCCCATTTTCTCCATT
CCTCCCCCCAATCTACC--TCCCGCTCGCCTCCCAGCCGGCCGCCATGCCACCGAAGAAGTACATCGTCCCCCGCGCCGC
GGCAACCGCGACCGCCTCCGTCGCCC-----------AGCCGAAGCCGAGGA---------CACCGTCGTCCAAGCCCCC
GGGCATGACAAACGTCGATTGGAGGGCGGAAGTTCAGCGAGGGGAGGCTGTCACCGCCGACCGGCAGAACAGGGCCATCG
CTAAGAAGGCCCGTGACAACGCGGCACGCGCGGCTGC------------GGCTGCGGCTTCGACG------------GAC
GAAGCCGAGGCCGAGGCGACTCGCGCGGG-ATGATGAATCCACCCGGCAGCCACGCCCAGTACGCTCCCTGGGGCCAGCA
AGGCGTCGGTCTCTCCGTCGCCGCAGCCATGGGGATCGCCCTCGCCGGGCTACACCGACGGGGACGCGCACGGTGGGTTC
AACCCAAACGTCACCTTCCCCC-
>chr3B_2472
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--------------------------------------------GGGGCGCCGGCACAAGCGAAAAGGG-CGCATGGGTC
CGCCCTGTCGGCGAGTCGAGCGCCTCTTCCCGTCGTTTCTTCCCGC-TTTTTCC-C-ACTTCCCTCTCATTTTCTCCTTT
CCTCCCGCCAATCTTCC--TCCCGCTCGCCTCCCAGCAGGCCGCCATGCCACCGAAGAAGTACGTCGTCCCCCGCACCGC
GGCAACGGCGACCGCCTCCGTCTTCC-----------AGCCGAAGCAGAGGAAGCCGAGGGTGCCGTCGTCCAAGCCACC
GGGCATGACAAACGGCGATTGGAGGGTGGAAGTGCAGCGACGGGAGGCCGTCACCGCCGACCGCCGGAACAGGGCCCTCG
CCAAGAAGGCCCGTGACAACGCTGCACGCGCGGCTGC------------CGCTGCCGCTTCGGCG------------GAC
CAGGCCGAGGCCGAGGCGACTCGCGCGGGGATGATGAATCCACCCGGCAACCACGCGCAGTACGCGCCCTGGGGCCAGCA
AGGCGTCGG-GTCTCCGTCGCCACAGCCATGGGGATCGTCTTCGCCGGGCTACGCCGACGGGGACGCGCACGATGGGTTC
AACCCAAACATCACTTTCCCCCA
>chrUn_2472
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--------------------------------------------GGGGCGCCGGCACAAGCGGAAAGGGGCGTGTGGGTC
CGCCCTGTCGGCGAGTCGAGCGCCTCTTCCCGCCGTTTCTTCCCGCTTTTCCCC-C-ACTTCCCTCCCATTTGCCCCTTT
CCTCCCGCCATTCTCCC--TCCCGCTCGCCTCCCAGCCGGACGCCATGCCATCGAAGAAGTACGCCGTCCCCCGCGCCGC
GGCAACCGCGACCGCCTCCGTCGCCC-----------AGTCGAAGCAGAGGAAGCCGAGGGCGTCACTGTCCAAGCCGCC
GGGCATGTCAAACGCCGATTGGAGGGTGGAAGTACAGCGACGGGAGGCCGTCACTGCCGACCGGCCAAACAAGGCCCTCA
CCAAGAAAGCCCGTGACAACGCGGCACGCGCGGCTGC------------GGGCA------------CCGCTGACGCTGAT
CAGGCCAAGGTCGAGGCGGCTCGCGCAGGGATGGTGAATTCCCCCGGCAACCACGCGCAGTACGCGCCCTGGGGCCAGCA
AGGCGTCGA-ATCTCTGACGCTGCAGCCATGGGGGTCG------CCGGGCTACGCCGACGCGGACGCACACGGTGGGTTC
AACCTGAACGTCGCTTTCCCCCA
>SNPs
SS-----S---------------------------------------------------SSSSS----------------
--------------------------------------------------------------------------------
-------------S--------SSSSSSSSSSS-----------------------------------------------
-----------------------S--------------------------------------------------------
---------S------------------------S----------S--------------------S-------------
------S-------------------------S---S-------S---------------------SSS-----S-----
-S-------------------S-----------------------S-------SS-------------------------
--S-----------S-S-------------------S---------------S---S--------------------SS-
---S-------------------------------------S---SS---------------------------S----S
----------------------------S---------------------------SS-S-SSSSSSSS-S--S-----S
--S-------------------------------S-S------S----SS---------------------------S--
---S----S-----------S---------------------------S----S--------------------------
-S------------------------------------------------------------------------------
---------------------------------------------------------------SSSSS---------S--
------------------------------S-------------------------------------------------
----SS----------------S---------S--------------------S-----------S----S---------
----------S-S-S-----------------------S-------S----------------------------SS---
----------SS--------------------------------------------------------------------
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--S-----------------------------------------------------S--------------SS--S----
-------------------------------------------------------------S--SSS----S---SS---
--------S-----------------------------------------S-----------------------------
---------------------------------------------------------------------------S----
-------------S---------------SS---------------S----S----------------------------
--S--------------------------S-------------------------------------S------------
------------------------------------------------------------------SSS-----------
-----------------------------------S---------------------------------------S----
-----------------------------S-----S--S------SS---------------S-----------------
-------------------------S-S------S-----------------------------SSSS-SSSSSSSS-S-
----------------------------------------------------S---S----------------------S
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS------------------------------------
----S----S---------------S---S-----------SS-S--------SS--------------S--S-------
-------S--------------------------------------S---------------------------------
-----------S-----------S-----------S---------------------------------S----------
------------------S----------------------------------S-S-------S-----------S----
-S-----------------------------S------------------------------------------------
-----------S------------S-------------------S----------S------------------------
----S-------------S-------------------------------------------------------------
-----------------S-----
>forward_433
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------GGATTTTTGGTGCCCGGATG-----------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------
>reverse_2453
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------CTGCAAAGTCACGGGGTCAT--------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------
