>input_sequence_62423
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-----------------------------------------------------------ATGGCCA--------------
-------------CGCTGCGTTTCGGCTACGTCCTCCTCGCCACCCTGGCCGCGCTGCTCGCCGCGGTGGCCGGCGCCGA
TCCGGGCAAGATCGGGGTGTGCCACGGCCGCGTGGGCGGCAACCTGCCGGCCCCTGAGGCGGCCGCGGCGCTGCTGAGGA
GTAACGGGATCACCAAGGCGCGGCTCTTCCTCCCCGACCCGGCCGTGCTCCCGGCCTTCGCCGCGGCCGGCATCGACCTC
ACGGTCGGCGTGCCCAACGAGAACCTCACCTTCCTCTCCGCCGCCGGGCCCGAGGGCGCGCTGCAGTGGCTCCGCACGAA
CGGCCTCGCCAGCGGCCCCGTCGCCGGCCGGCTCCGCTACCTCGCCGTCGGCAACGAGGTGCTCTACAACAACCAGTTCT
ACGCGCCGCACCTGGTGCCGGCCATGCGGAACCTGCACGCCGCGCTGGCCTCCCTGGGGCTCGACGGCGCCGTCAAGGTC
TCCTCCGCGCACGCCTCGTCGGTGCTCGCGTCCTCCTACCCGCCCTCGGCGGGCGCCTTCGACGCCGCCCAGATGGACGT
GCTCCGGCCCATGCTGCGGCTCATGGCCGACACCGGCGCGCCATTCATGCTCAACGCCTACCCGTTCATCAGCCACGTGG
GCGACCCGGCCAACGTGCCGCTCGCCTACGCGCTCGGCGCCTCCGACGAGCCCGTGGTGCGCGACGGCGCGCTGGCGTAC
TCGGGCCTGTTCGACGCGACGGTGGACGCGGTGGTGGCGGCGCTCGAGCGGGAGGGCTTCGCCGGCGTGCCGGTGGCGGT
GACCGAGACCGGGTGGCCCACCGCGGGGCACCCGGCCGCGACGCCGGAGAACGCGGCGGCGTACAACGGGAGGATGGCGG
AGCGGGCGGCGCGGGGCGTGGGCACGCCGCGCCGGCCCGGGGCGCCCGTGGAGGTGTTCCTGTTCGACCTCTACGACGAG
GACGGCAAGACCGGCGCCGAGTTCGAGCGCCATTTCGGCATCTTCAGGGCCGACGGCGCCAAGGCCTACAACATCAACTT
TGCCTAG-------------------------------------------------------------------------
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>chr5B_1_TraesCS5B01G321000
CAATTTCTGCGACGTGGCACGGGAACACCACCTCCTGGCCCACCCGCCACGCCGCAGCGCCTACTCCACTGCATGCGTCC
ACCACTACTCCCTCGTCGTCGAGGAGTTCCACCCGCGGCCCTCGCCGGCGAACGTGACCGTGTCGAGGCACCGGCACCGC
CGCACAAAAATCCGGCACAAACACGCAAGGGAGACGAGACGGAGACGAGTTCATCCGCTAATACTCAGCTAACCCAAACT
AACCTTTGCGTCAACCGATCGGTGCTCCCAACTACTGCGCAGTACTAGTATTTTGCTTCTTCAAACTGGTGAGTCCTGTG
TCGCCCTGTACGATACAGGCTGGGGGAGTGGCAAAGCAAAGGAGGATGGACGGGCTTCATTCTAGTTCTCCTCCTCTATC
CTCACTCACTGATGGCGGTCTTTTGCTGCAATAGTGGCAGCCCCAGCAACACCGGCGGGGTGCCACATGGACCTTTTTTT
TTAACCTGGCTTTACCCCTTTCCATTGCAAGAGAATGGAAATACAAACCAGTTCAAGTTTACAGAAGGAGGGAAAGAGGA
TAGAGCGAGTTCAAGCACTACCAGAAAACTCACCACATCCGAAACGGATGTCCTGGGGCAAAAACCTGGTAGCACCAACT
TGTCAAGTCTATTACAAGCCATAACCAGTGCCACATGGACCTCCAGGCCAGGACAGCACAGCACCAGATCATTTGATGTG
CAGCTCGATCGCCATTCAAAAGCCAACGGCTATAATATGCTCTAACGGCTACCCGTCCTATCTATCAATCGGACCGCCCC
GGCAAGGCAACCGTCAAAAGCAACTCAGATTAGATTCCCGCCAACGTCCCCACCAAGGTCAGGTCTGCACCAACGTACAG
TATGTACGTGACCCCCTCCTGCCA-------CAACACAGGCTCTATATAACCGACGACGACGAGGGAAGAGCCCAACACT
CCACATACAAACATCACGAGATCAACACCGCCGAATCGTAACGTAC------------AATGGCCA--------------
-------------CGCTGCGTTTCGGCTACGTCCTCCTCGCCACCCTGGCCGCGCTGCTCGCCGCGGTGGCCGGCGCCGA
TCCGGGCAAGATCGGGGTGTGCCACGGCCGCGTGGGCGGCAACCTGCCGGCCCCTGAGGCGGCCGCGGCGCTGCTGAGGA
GTAACGGGATCACCAAGGCGCGGCTCTTCCTCCCCGACCCGGCCGTGCTCCCGGCCTTCGCCGCGGCCGGCATCGACCTC
ACGGTCGGCGTGCCCAACGAGAACCTCACCTTCCTCTCCGCCGCCGGGCCCGAGGGCGCGCTGCAGTGGCTCCGCACGAA
CGGCCTCGCCAGCGGCCCCGTCGCCGGCCGGCTCCGCTACCTCGCCGTCGGCAACGAGGTGCTCTACAACAACCAGTTCT
ACGCGCCGCACCTGGTGCCGGCCATGCGGAACCTGCACGCCGCGCTGGCCTCCCTGGGGCTCGACGGCGCCGTCAAGGTC
TCCTCCGCGCACGCCTCGTCGGTGCTCGCGTCCTCCTACCCGCCCTCGGCGGGCGCCTTCGACGCCGCCCAGATGGACGT
GCTCCGGCCCATGCTGCGGCTCATGGCCGACACCGGCGCGCCATTCATGCTCAACGCCTACCCGTTCATCAGCCACGTGG
GCGACCCGGCCAACGTGCCGCTCGCCTACGCGCTCGGCGCCTCCGACGAGCCCGTGGTGCGCGACGGCGCGCTGGCGTAC
TCGGGCCTGTTCGACGCGACGGTGGACGCGGTGGTGGCGGCGCTCGAGCGGGAGGGCTTCGCCGGCGTGCCGGTGGCGGT
GACCGAGACCGGGTGGCCCACCGCGGGGCACCCGGCCGCGACGCCGGAGAACGCGGCGGCGTACAACGGGAGGATGGCGG
AGCGGGCGGCGCGGGGCGTGGGCACGCCGCGCCGGCCCGGGGCGCCCGTGGAGGTGTTCCTGTTCGACCTCTACGACGAG
GACGGCAAGACCGGCGCCGAGTTCGAGCGCCATTTCGGCATCTTCAGGGCCGACGGCGCCAAGGCCTACAACATCAACTT
TGCCTAGTACTAGTAGAGCTGCTTGTATGGAGATGATCGGCACGCTGTTGATCTGTGGATCAACTGGCTGATATGCTAGC
GTGATCTGTCCATGTATTTTATTTTATTTTTGACGGGGCGTGATCTGTCCATGTATCTCCCGTTATGTTAATTGCTGCGA
CTTGCACTTCATGATTTCATAAGCATTCTCCTGTCGATCTGGGCATTGCCGATAAGTAGACAGACATCATGATCTCACAA
GGCTGAAGAAACTTAC--------------ACTGAATCCTCACTGTTCATTCTGAAAAATGTTATTCTCTCAAACTATAG
TAAGGAGTATGTTGCAACACCCTGGCTGGCACAGCACCGTCTTAGGGAAATTGTTCAGATGACACTA-TTTGACTAACTC
CACCTATGTTTGTCTCAATATAGCCCATCCAAGCTATGTTGTCTCAATATAGCCCATCCAAGCCA-------------AG
GGTTGTGATAGGTTTGACAAACCA---------------------------AGCCAACGTCAAAACTCGACCGCTCTCAT
GGAGATAAAACCCAGGGGCGGGTACTACCCCAGAAGAATATATTTCAAAATTTGGGGTCAATGCTGCAGAAAAGTGATGA
TATCGATGAAGATGTGAGGCATCGAATCAAAACCGAATGGATGAAGTGACG-CAACATTCTGGCATCCTTTGTGACAAGA
TAGTGCCCCAAAAACTA-----AAAGGAAGGTTATATAGGACGACGATTCGTGTTGTATGGCACGGAGCGTCGGCCGACT
AAAAGACGACATGTTCAATAGTTACGTGTGACAGAGATGCACATATTATGATGGATCCGGAATGATGATATACATGATAG
ATTTGGGGTAGCACCGATTGAAGAAAAGCTTATCCAACATCATCTGAGATGGTTTAGACATATACAACACATGCCTTCAG
AAGTTCCAGTGCATAGCACACTCAGACAGCTAAAGCATGCTAATAATGACAAGAGAAGTCGAGGTAGACCAAACTTGACA
TAAGGGGAGTCCCTAAAAAATGATATTT
>chr5A_686
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---------------------------------------------GGCCAGGACAGC---GCACCAGATCATTTGATGTG
CAGCTCGATCGCCATTCAAAAGCCAACGGCTATAATATGCTCTAACGGCTACCCGTCCG----ATCAATCGTACCGCCCC
-----GGCAACCGTCAAAAGCAACTCAGATCAGATTCGCGCCAACGTCCCCACCCAGGTCAGGCCTGCACCAACGTAC--
-----------------CCTGCCATTCTTGTCAACACAAGCTCTATATAACCGACGA------GGGCAGAGTCCAACACT
CCACAGACAAACATCACGAGATCAACACCGCCGAATCGCAACGTACTCACAAAGTCACAATGGCCACGAGCATAACGGCA
GCGGCGGCGGCGTCGCTGCGTTCCGGCTACGTCCTCCTCGCCGCCCTGGCCGCGCTGCTCGCCGTGGCGGCCGGTGGCGA
CCCGGGGAAGATCGGGGTGTGCTACGGCCGCGTGGGCGGCAACCTCCCCGCGCCCGAGGCGGCCGCGGCGCTGCTGAGGA
GTAACGGGATCACCAAGGCGCGGCTCTTCCTGCCGGACCAGGCCGTGCTCCCCGCCTTCGCCGCGGCCGGCATCGACCTC
ACGGTCGGCGTGCCCAACGAGAACCTCACCTTCCTCTCCGCGGCCGGGCCCGAGGGCGCGCTGCAGTGGCTGCGCTCCAA
CGGACTCGCCAGCGGCCCCGTCGCCGGCCGGCTCCGCTACCTCGCTGTCGGCAACGAGGTGCTCTACAACAACCAGTTCT
ACGCGCCGCACCTGGTGCCGGCCATGCGGAACCTGCACGCCGCGCTGGCCTCCCTCGGGCTCGACGGCGCCGTCAAGGTC
TCCTCGGCGCACGCCTCGTCGGTGCTCGCGTCCTCCTACCCGCCCTCGGCCGGCGCCTTCGACGCCGCCCAGATGGACGT
GCTCCGGCCCATGCTGCGGCTCCTTGCCGACACCGGCGCCCCCTTCATGCTCAACGCCTACCCGTTCATCAGCCACGTCG
GCGACCCGGCCAACGTGCCGCTCGCCTACGCGCTCGGCGCCTCCGACGAGCCCGTGGTGCGCGACGGCGCGCTGGCGTAC
GCGGGCCTGTTCGACGCGACGGTGGACGCGGTGGTGGCGGCGCTCGAGCGGGAGGGCTTCGGCGGGGTGCCCGTGGCGGT
GACCGAGACCGGGTGGCCCACCGCGGGGCACCCGGCCGCGACGCCGGAGAACGCCGCGGCGTACAACGGGAGGATGGCTG
AGAGGGCGGCGCGGGGCGCCGGCACGCCGCGCCGGCCCGGGGCGCCCGTGGAGGTGTTCCTGTTCGACCTCTACGACGAG
GACGGCAAGACCGGCGCCGAGTTCGAGCGCCACTTCGGCATCTTCAGGGCAGACGGCGTCAAGGCCTACAACATCAACTT
TGCCTAG----AGTAGAGCTGCTTGTATGGAGATGATCGGCACGCTGTTGATCTGTGGATCAACTGGCCGATATGCTAGC
GTGAA---------------------------------------CTGTCCATGTATCTCCCGTTATGTTAATTGCTGCGA
CTTGAACTTTATGATTTCATAAGCATTCTCCTGTTGATCCGGGCATTGCCGATAAGTAGA--GACATCATGATCTCACAA
GGCTGAAGAAACTGAATCAAAGAAACTTAAACTGAATCCTCACTGTTCATTCTGAAAAATGTTGTTCTCTCAAACTCTTT
CT-----TATGTTGCAACACCCTGGCTGGCACAGCACCATCTTAGGGAAAAAAT------GACACTACTTTGACTAACTC
CGT------------------------------CTACGCTGTCTCAACATAGCCGATCTCAAGC----------------
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>chr5D_688
CCAGGCCAGG----------------------------------------------------------------------
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---------------------------------------------------------ACAGCACCAAATCGTTTGATGTG
CAGCTCGATCGCCATTCAAAAGCCAACGGCTATAATATGCTCTAACGGCTACCCGTCCA----ATCGATCGTACCGCCCC
-----GGCAACCGTCAAAAGCAACTCAGATCAGATTCGCGCCAACGTCCCCACC-----CAGGCCTGCACCAACGTACTA
CGTGAC-----CCCCCTCCTGCCATTCTTGGCAACACAAGCTCTATATAACCGACGA------GGGAAGAGTCCAACACT
CCAAACACAAACATCACGAGATCAACACCGACGAATCGTAACGTACGCG------CACAATGGCCA--------------
-------------CGCTGCGTTTCGGCTGCGTCCTCCTCGCTGCCCTGGCCGCGCTCCTCGCCGCGGCGGCCGGCGGCGA
CCCGGGGAAGATCGGGGTGTGCCACGGCCGCGTGGGCGGCAACCTCCCCGCGCCGGAGGCGGCCGCGGCGCTGCTGAGGA
GTAACGGGATCACCAAGGCGCGGCTCTTCCTCCCCGACCCGGCCGTGCTCCCGGCCTTCGCCGCGGCCGGCATCGACCTC
ACGGTCGGCGTGCCCAACGAGAACCTCACCTTCCTCTCCGCGGCCGGGCCCGAGGGCGCGCTCCAGTGGCTGCGGTCCAA
CGGACTCGCTGCGGGCCCCGTTGCCGGCCGGCTCCGCTACCTCGCCGTCGGCAACGAGGTGCTCTACAACAACCAGTTCT
ACGCGCCGCACCTGGTGCCGGCCATGCGGAACCTGCACGCCGCACTGGCCTCCCTGGGGCTCGACGGCGCCGTCAAGGTC
TCCTCCGCGCACGCCTCGTCAGTGCTCGCGTCCTCCTACCCGCCCTCGGCCGGCGCGTTCGACGCCGCCCAGATGGACGT
GCTCCGGCCCATGCTGCGGCTCCTGGCCGACACCGGCGCGCCATTCATGCTCAACGCCTACCCGTTCATCAGCCACGTGG
GCGACCCGGCCAACGTGCCGCTCGCCTACGCGCTCGGCGCCTCCGACGAGCCCGTGGTGCGCGACGGCGCGCTGGCGTAC
GCGGGCCTGTTCGACGCGACGGTGGACGCGGTGGTGGCGGCGCTCGAGCGGGAGGGCTTCGGCGGCGTGCCCGTGGCGGT
GACCGAGACCGGGTGGCCCACCGCGGGGCACCCGGCCGCGACGCCGGAGAACGCGGCGGCGTACAACGGGAGGATGGCGG
AGCGGGCGGCGCGGGGCGTCGGCACGCCGCGCCGGCCAGGGGCGCCCGTGGAGGTTTTCCTGTTCGACCTCTACGACGAG
GACGGCAAGACCGGCGCCGAGTTCGAGCGTCACTTCGGCATCTTCAGGGCCGACGGCGTCAAGGCCTACAACATCAACTT
TGCTTAGTACTAGTAGAGCTGCTTGTATGGAGATGATCTGCACGTTGTTGATCTGTGGATCAACTGGCCGATATGCTAGC
GTGA---------------------------------------TCTGTCCATGTATCTCCCGTTATGTTAATTTCTACGA
CTTGAACTTTATGATTTCATATGCATTCTCCTGTTGA-----------------------------TCATGATCTCACAA
TGCTGAAGAAACTTAC--------------ACTGAATCCTCACTGTTCATTCTAAAAAATGTTGTTCTCTATAACTCTTT
AGTAC--TATGTTGCAACGCCCTGGCTGGTACAGCACCATCTTAGGGAAATTACTCAGAGGACACTACTTTGACTAAGTC
CAT------------------------------CTATGTTGTCACAACATAGCTGATCTCAAGTCCGAGTGAAGGAGGAG
GATTGTGATAGGCTTGACGAGCCAACGTTAAAACTCAGTCACTGCTTGACGAGCCAACGTCAAAACTTAGCCACTCTTAT
GAAGATGAAACGCAGGGGCGGTGG-TACCTCAGAAGGATACCTTTCGAAATTTGGGGTCAATGCTACATAAGGATGTCGA
TATCAATGAAGATGTGAGCCATCGAATCAAAACCGGATGGATGAAGTGCCGCCAACCTTCTGACATTATTTGTGACAAGA
GAGTGCCGTAAAAGTTAAAAGGAAAGGAAGGTTCTATAGGACGGCGATTTGTGCTGTGGCAGAGAGTGTTA--GCCGACT
AAAATGCAACATGTTCAATAATTAGGTGCAACGAAGATGCGCATGTTATGATAAATCCGAAATGATGATATACATAATAG
AGTTGGGGTAGAACCGATTGAAGAAAA---------ACTTCATTTGAGATGGTTTGGGTACATACAGCACATGCCTTTAA
AAGTTCCAGTG---------------------------------------------------------------------
----------------------------
>SNPs
-S-SSS-S-SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS-----------------------------------
----------------------------------------------------------SSSSS--------S--------
SSSSS-------------------------S------S----------------S--------S--------------SS
SS--SSSSSSS---------------------------S------------------SSSSSS--------S--------
-----S--------------------------------------------------------------------------
------------------------------------------S------------------------S--------S---
S-----S--------------------------------------S--S--S--S-------------------------
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-----------------------------------------S-----------------------------S---S-S--
---S----------------------------------------------------------------------------
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--------------------------------------------------S-----------------------------
----------------------S---------------------------------------------------------
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S------------------------------------------------------------S---------S--------
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-------------------S------------------------------------------------------------
--------------------------------S-------------------------S---------------------
--------------------------------------------------------------------S-----------
----SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS-------------------------------------
----S----S------------------------S----S--------------------SS------------------
---------------------------------------------------------------S------------S-SS
SSSSSSS-------------------------------S-------------S------S--------------------
--SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS--------------S------S---SS-SS-S---------------
-S----------S-----S-S----------------------------------------------SSS--S----S--
-S----S----S---------SSSS----S------S---SS----S------------------S--S--SSS--SS--
----S-------------S----------------S------------S-------S-----S---SS------------
S------SS----SS------------------S---------S-----S---S---SSSSS-SS-S-SSSSS-------
----SS-S------------S---S---SS--SS------S---S-------SS-----S---------------S----
-S---------S---------------SSSSSSSSS--S----S-----------S-SS-S-----S----------S-S
-----------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSS
>forward_880
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------------------------------------------------------------AGGTCTGCACCAACGTACAG
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>reverse_2870
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---------------------------------------------------------------------GTCGGCCGACT
AAAAGACGA-----------------------------------------------------------------------
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