>input_sequence_62383
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------GAGTTCAGAAATCATTTCAATATATATCTCCAACTTAATT
ATTACTGTAACTTGTGCTCCTGGGTGGGTGTTGCATCTTCATGTTATCTAGGATTATCACCAAACCTGGATGGAGTTCCA
GCTGTCATTCTTCATATTAAGTCTCTTCTGTTTTTCATTCAATCATGTTTAATAAGCAGTAGGTCAATCTGAATACCTGC
TGTTGCTTTATAGTACTAATATTATATATATATTTTTATATTTTTTTAGGTCTGATGGCTTGCTGGAGGCCGTCAACT--
--TGGTGTCTATCTGTTGGC----TCATGTAATCAACCATATCCTGTCAGCACTTGGCACCGTGACAAAA----------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------TTTGGCCTTTTCTCTTGGCTGCATTCTCATGTCACTGTCCCGGCAAATCGTGCTGGTTCATTCAGC
AA----TCTTGTAGTCTTGTCCTAGTGTGTGCGTGCCTTGTGATGAATAATACATTACCGCTGCAGATCCAAGAAGGATA
GGAAGGCAAGGCAAGCAGATACT---------GAACTCAACACAT---CAACACC---GAGAACGGCTGAGCAGAGATGC
TTCCTTCGACG---GCTCAGCTTGC---TGCGGCGGCGGCCTTGACGCAGCCGCAGCTGAGGCAGATGAGGGCGCAGTGC
ATCGTCTTCCTTGCCTTCAAGTACGTTATTCTTGGCCGGTAGCAAGCATCTCAATCTCTGCAGGAATTCCGTTGT-----
-----------TTCTT----TCATCTTGACATG--------TGTG------------TGTGATAGGAACCAGATGGAGCC
CAGGAAGCGGCACCTCGACATCGCGCTCGGTGAGGATGACATCGACGGGGCCGGCTGCCACGGCGAGAC------GACGA
CGA---GCTCGCCTTCTCAAGCCTCGTCGTCCTCTGCTGCACCGTTGCCGCTGCTCCACCTCCTGC--------------
---------------CCATCTCCTCGCTGCGGCTGTCTCCGCCGGT------GACGGAGCAGGAGCAGGAG---------
---AATCGCCACCGCAACGACGACCCTGAAGCAA---AGCACGAGTA------GTTGATTGATGGTTGTATTCTCTTCTC
GCCCCTG-CTGAGCCATCGACC--------------------AAAAATGAATGAGTTTCCGTTCG---------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--
>chr2D_1_TraesCS2D01G554700
AAACAATGCCATCAGTTTATTCCATCTGGTACCTAGTACTTCCTCCGTCCGTAATTAGTTGATGCTCAAACCGATGTATC
TAACACTGAAATACGTCTAGATACACCCGAGCATCAACTAATTCCAGACAGAGAGAGTATATGATAAAGTATTCTTAGGC
TAGTTAGATATTAGTATGGCAATTGGGCAGGAAACTCACATGAGAATTGCATAACCATTCTCAACTCAGGAGTAGCTCAA
CAACAGTTTGGAAGAAAAAGTGGACGTAAATGGCGGAACAAATCAACAACTGTTTTCTTTAGTATCTCCAGGCCTCAAAT
TAATCTGTAATGGACAAGGTGTGTGCTGTGTAAACTACCTGCGGTAGAAACATAACATTCATTAACTGTATGTTGCATTT
CTCTATAACAGTTTGTTGATGACAGGTTTTCTTGATGGGGAAAAAGCTCGACTACATGTTCAGAATGCTGGGAGCTCAGA
GTGCACCATCGACAATATATGAAGGAGCTGCTCAGTTGTAGGGACTTCTCCTTCATATTCTGATCTCCGGTGTGCGCATT
CCATTTCTGAAGGCCTCATCCATTTGGCATCAAATTGAAACAATGGAAGTATTTCGGAAGGTACCGTACCACGGGAACCC
CAATTCCTTGCACTTGAGCCATTTGTGCTAGAACTGCGTGAAGGAATGACTATAGCCTATAGGTCTAGCTGGAAGTGTGA
AGAGATCATGTGTAGAAGACAACATTGAGTCATTTGAAAGTAAGATCAGTGCACTTGCCCATTTAGAGGAAAACAGATTT
GATGTTAAGTCGCTGCAGCAAGGTCTGAATGTCTGATCGAACTGCCTGAGAACCAAATGGGACCACACCAAGTGTCCCAA
AAAAAACCTTTATGGCAAAGCAGATCAGACTGCAGAGCTCTGAATGCGGCTCAGGAAGCACGCCTTGGTGATGAAATGCG
GTTTCACAGTATCCTAGCTGAGCTACGCCCGACCGATATGGAGTTCAGAAATCATTTCAATATATATCTCCAACTTAATT
ATTACTGTAACTTGTGCTCCTGGGTGGGTGTTGCATCTTCATGTTATCTAGGATTATCACCAAACCTGGATGGAGTTCCA
GCTGTCATTCTTCATATTAAGTCTCTTCTGTTTTTCATTCAATCATGTTTAATAAGCAGTAGGTCAATCTGAATACCTGC
TGTTGCTTTATAGTACTAATATTATATATATATTTTTATATTTTTTTAGGTCTGATGGCTTGCTGGAGGCCGTCAACT--
--TGGTGTCTATCTGTTGGC----TCATGTAATCAACCATATCCTGTCAGCACTTGGCACCGTGACAAAA----------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------TTTGGCCTTTTCTCTTGGCTGCATTCTCATGTCACTGTCCCGGCAAATCGTGCTGGTTCATTCAGC
AA----TCTTGTAGTCTTGTCCTAGTGTGTGCGTGCCTTGTGATGAATAATACATTACCGCTGCAGATCCAAGAAGGATA
GGAAGGCAAGGCAAGCAGATACT---------GAACTCAACACAT---CAACACC---GAGAACGGCTGAGCAGAGATGC
TTCCTTCGACG---GCTCAGCTTGC---TGCGGCGGCGGCCTTGACGCAGCCGCAGCTGAGGCAGATGAGGGCGCAGTGC
ATCGTCTTCCTTGCCTTCAAGTACGTTATTCTTGGCCGGTAGCAAGCATCTCAATCTCTGCAGGAATTCCGTTGT-----
-----------TTCTT----TCATCTTGACATG--------TGTG------------TGTGATAGGAACCAGATGGAGCC
CAGGAAGCGGCACCTCGACATCGCGCTCGGTGAGGATGACATCGACGGGGCCGGCTGCCACGGCGAGAC------GACGA
CGA---GCTCGCCTTCTCAAGCCTCGTCGTCCTCTGCTGCACCGTTGCCGCTGCTCCACCTCCTGC--------------
---------------CCATCTCCTCGCTGCGGCTGTCTCCGCCGGT------GACGGAGCAGGAGCAGGAG---------
---AATCGCCACCGCAACGACGACCCTGAAGCAA---AGCACGAGTA------GTTGATTGATGGTTGTATTCTCTTCTC
GCCCCTG-CTGAGCCATCGACC--------------------AAAAATGAATGAGTTTCCGTTCGGATACAA------AG
TGTTGTTCTCATACA------------------------------T--ACATACATATAACAACTTCGATTAGCTTTCTC
ATACATACATACAGCAACTTTGGTTATCTTTCTACCATCATTTGTGTAGCATCATTTGTATAGGTCACTGTACGTATATG
AATGTTTTGTCATAGTATTTTTTTAAGGGGAAAAGCCACTTTATTGATCAAAAATCCACAGAAGGTGGGAT--------G
GTCATGCAGCTGGCCA--AGCCATACATGACGCCTCTGAGCTAGGGTAGTAGTAAACTTAGCTAAACTATAAGCTTCAAA
ATTTACACCACGCCCTTCAAAAGTGAGGTTACAAGAAAAAAGAGTTGATCTATATTTAGTTTCGCTTATGATAGCTCCGT
AGGGTCCTTGGTTGCCTTTAGAGATGTCATCCACCACTTCCTTACAGTCAGATGCTACGATGAATTGACTGATGTGAAGA
TCCACCGTGAGAACAATTGCCTCACGACAAGCTATCGCTTCTAGTGTGGCAGGATCAAAGTTGGAATTCAAATATTTAAA
ATTAAAATTAAAATTAAAATTGGAATTCAAATATTTTGGACGTCGATATATTAAGTATTTTACTCAGAAGTGTCACCAAC
AATTCCCTGGCGTTGTGGTTAGTTGATCGCAGCTACAGCTTGCTCGTACGTCCTGAGTTCGACCCCTGGTCATTGCAGCA
TTTTTAAACTTTTGCTTTTTTTCGAAAAAAAACACAGGG-----------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------GCGAGGCCAGACTCGAACCCGCGACTAGCTGA
TGGGGAAAGGATGCCTTTGCCACTAGGCCACTACAAGTTCAGCTGATATATAAGAGATGCTGCTTATTTAACTGGACAGT
GAGCGTTTGAATTCAAAATTTTCAAAATACTCGAGATATTTTGCTCGGTATGAGTGTTTCTCGAGGGGCGACGGTAAACG
CGGTAATCGCGCGAGATCGCGAAATTTCGCTCGGTACCCAAAACGCTGGTCCGCAGGATCGCATACTCCTCCAATGACCA
AA
>chr2D_1160
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------CAATCCTGTTTGATACGCAGTAGGTCAATCTAAAGATCTA-
--TTACTTCTTTATAATATCAGTCGATATCTTGTACTAT-TTTTGTATGGTCTAATAGCTTGTTGGAGGCCGTCATTTAA
CTTGGTGTCTATCTGTTGGTTGGTTCATGTAATCAACCATATCCTGTCAGCATTCAGCACTTGGCATTTAACTTGAGATC
TGCGTTGTTGCTGATTACATATGGATCTTAAATGCTTGCAAATTTGACTCTGTCTTTATTGTATGCTAGTTGGACGGTTT
AATCTGGTTGTTTTTTCATCCATTTCTGTTTAATATGCGGTAGGCCAATCTGAAGACTTGTTATCGCTTTATAATATTTG
ATCAATCAGTATGCTTTATTTTGTTATATGGTCTGATGGCTTGTTAGAGGCGGTCAACTTGGTTTTTATCTGTTGGTTTG
TTCATCCAATCAACCATATCCTGTCAGCATTCAGCACTTGGCGTTCAATAGATCTGCGTTGCTGCCAATGAAGAAGCCTA
TTCAGGTTTGCTGTTTTGGCCTTTTCTCTTGGCTGCATTCTCATGTCACTGTCCCGGCAAATCGTATC------------
----GATCTTGTAGTCTTGTCCA------------------------------------GTTGCAGATCCAAGGAGGGGA
GGATAGGACGGCAACTAGGCAAGCATACTCAAGAACTTACAACATCAACAACACC---GAGAACGGCTGAGCAGAGATGC
TTCCTTCGACG---GCTCGGCCTGC---TACGGCGGCGGCCTACACGCAGCCGCAGCTGAGGCAGATGAGGGCGCAGTGC
ATCATCTTTCTCGCCTTCAAGTACGTTATTCTTGTTGGGTAGCAAGCATCTCAATCTCTGCAAGAAACACCCGGCCGGGC
ATATAATTCCCTTGTTTCTTTCACCTTGACATGTGTG----TGTG------------CGTGCTAGGAACCAGATGGAGCC
GAGGAAGCGGCACCTCGAGATCGCGCTCGGTGAGGATGACATCGACGGAGCCGGCTGCCACGGCGAGAC------GACGA
CGACGAGCTCACCTTCTCAAGCCTCGTCGTCCTCTGCCGCACCGTTGCCGCTGCCCCACCTCCTGC--------------
---------------CCATCTCCTCGCTGCGGCTGTCCCCGTCCAT------GACGGAGCAGGAGCAGGAG---------
---AATCGCGACCACAACGACGACCCTGCAGCAG---AACATGAGTA------ATTG----ATGGTTGTATCCTCTTCTC
CCCA-------------CGACC--------------------AAAGATGAATGAGAGGCTCCTTTTGG---ATACA-AAG
TGTTGTTCTCATACATACGTATAACAACTTTGATTAGCCTTGTCAT--ACATACATATAACAACTTTGGTTAGCTTTCTA
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--
>chr2B_1238
ATATTTTCTATA--------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------TATGGACTGATGGCTTGTTGGAGGCCGTCAACTAA
CTTGGTTCTTATCTGTTGGTTGATT-ATGTAATGAACCATATCCTGC---------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------TGTTCTGTCAGCACTCGGCACTCGGTGCTTATCTC-----------------------------
---------------TTGGCCTTTTCTCTTGGCTGCATTCTCATGTCACCGTCCCGGCAAATCGTGCTGCTTCATTCAGC
GA----TC---------------------------------------------------------GATCCAAGAAGGATA
GGAAGGCAAGGCAAGCAGATACT---------GAACTCAACACAT---CAACACC---GAGAACGGCTGAGCAGAGATGC
TTCCTTCGACG---GCTCGCCCTGCAGGTGCCGCGGCGGCCTACACGCAGCCGCAGCTGAGGCAGATGAGGGCGCAGTGC
CTCGTCTTCCTTGCCTTCAAGTACGTTATTCTTGGCCGGTAGCAAGCATCTCAATCTCTGCAAGAAACGGCCGGCGGGGC
ATATAATTCCCTTGTTTCTTTCCTCTTGACATGT-------TGTG------------TGTGCTAGGAACCAGATGGAGCC
CAGGAAGCGGCACCTCGAGATCGCGCTCGGTGAGGATGACATCGACGGAGCCGGCTGCCACGGCGAGAC------GACGA
CGACGAGCTCACCTTCTCAAGCCTCGTCGTCCTCTGCCGCACCGTTGCCGCTGCCCCACCTTCTGC--------------
---------------CCATCTCCTCGCTGCGGCTGTCTCCGCCGCCGTCGGAGACGGAGCAGGAGCAGGAGCAGTT----
--GAGTCACCACCGCAACGACGACCCTGAAGCAACAAAACACGAGTAGTTTTGATTG----ATGGTTGTATTCTCTTCTC
GCCC-------------CGACTGGGCCATCGACCGTCGACCAAAAAATGAATGAGTTTCCGTTCGGATACAATACA-AAG
TGTTTTTCTCC----------------------------------T--ACATACATATAACAACTTTGGTTAGCTTTCTC
ATACA--------------------------------------------------------AGGTCACTATACCTATATG
AATGTTTTGTCATATTTTTCTTTTGAGGGGAAAAGCCACTTTATTGATCAAAAATCCACCGAAGGTGGGATACAAATTGG
GTCATGCGGCTGGCCAAAAGCCATACTTGACGCCCCTGAACTAGAGTAGTAGAAAACTTAGCTAAACTATGAGCTTCAAA
ATTTACAGCACGCCCTTCAAAAGTGAAGTTACAAGAAAAAAGAGTTGATTTAGATT------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--
>chr2D_1343
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------TTTGGCCTTTCCTTCTGGCTGCATTCTCATGTCACTGTCCCGGCAAATCGTGCTGATTCATTCAGC
AA----TCTTGTAGTCTTGTCCTAGTGTGTGCGTGCCTTGTGATGAATAATACATTACGGTTGCAGATCCAAGAAGGATA
GGAAGGCAAGGCAAGCAGATACT---------GAACTCAACACAT---CAACAACACGGAGAACGGCCGAGCAGAGATGC
TTCCTTCGTCG---ACTGGTCCTGC---TGCTGCCGCGGCCTACACACAGCCGCAGCTGCGGCAGATGAGAGCGCAGTGC
ATCGTCTTCCTTGCCTTCAAGTACGTTTTTCTTGGGTAGCAA-----------------GCAAGAACCGGCCGGCCGGGC
--ATAATTCCCTTGTTTCTTTCATCTTGACATGTGTG----TGTGT----------------TAGGAATCAGATGGAGCC
CAGGAAGCGGCACCTCGAGATCGCGCTCGGTGAGGATGACATCGACGGAGCCGGCTGGCACGGCGAGAC------GACGA
CGA---GCGAGCCTTCTCAAGCATCGTCGTCCTCTGCCGCACCGTTGCCGCTGCCACACCTCCTGC--------------
---------------CCGTCTCCTCGCTGCGGCTGTCTCCGCCGGT------GACGGAGCAGGAGCAGGAG---------
---AATCTCCACCGCAACGACGACCCTGAAGCAG---AACATGAGTA------ATTGTTT--------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--
>chr2B_1343
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------TTTGGCCTTTTCTCTTGGCTGCATTCTCATGTCACTGTCCCGGCA---------------------
AA----TCTTGTAGTCTTGTCCTAGTGTGTGCGTGCCTTGTGATGAATAATACATTACGGTTGCAGATCCAAGAAGGATA
GGAAGGCAAGGCAAGCAGATACT---------GAACTCAACACAT---CAACACC---GAGAACGGCTGAGCAGAGATGC
TTCCTTCGACG---GCTCGCCCTGC---TACGGCGGCAGCCTACACGCAGCCGCAGCTGAGGCAGATGAGGGCGCAGTGC
ATCGTCTTCCTTGCCTTCAAGTACGTTAT----GTTGGGCAGCAAGCATCTCAATCTCTGCAGGAATTCCGTTGT-----
-----------TTCTTTCTTTCATCTTCACATGTGTGTGTGTGTG------------TGTGCTAGGAACCAGATGGAGCC
CAGGAAGCGGCACCTAGAGATCGCGCTCGGTGAGGATGAGATCGGCGGAGCCGGCTGCCAAGGCGAGA---CGACGACGA
AGA---GCTCGCCTTCTCAAGCCTCGCCGTCCCCTGCCGCACCGTTGCCGCTGCCACTGTCCCCTCGCTGCGGTTGTCCC
CTCGCTGCACCGTTACCGTCTCCTCGCTGCGGCTGTCCCCGCCGGT------GACGGAGCAGGAGCAGGAG---------
---AATCGCGAACACAACGACAACCCTGCAGCAG---AACATGAGTA------ATTG----AAGGTTGTATCCTCTTCT-
CCCA-------------CGACC--------------------AAAAATGAATGTGAGGCTCCTTTTGG---ATACAAAAG
TGTTGTTCTCATACATACGTATAACAACTTTGATTAGCCTTGTCAT--ACATAGATATAACAACTTTGGTTAGCTTTCTA
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--
>chr2A_1343
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------TTTGGCCTTTTCTCTTGGCTGCATTCTCATGTCACTGTCCCGGCAAATCGTGCTGATTCATTCAGC
GAATGATCTTGTAGTCTTCTCCA------------------------------------GTTGCAGATCCAAGGAGGGGA
GGATAACTAGGCAAGCA--------TACTGAAGAACTCACAACATGAACAACACC---GCGCACGGCCGAGCAGGGATGC
TTCCTTGGTCGTGGGCCCGCCCTGC---AGGTGCCGCGGCCTTGACGGCGCCGCAGCTGAGGCAGATGAGGGCGCAGTGC
CTCGTCTTCCTCGCCTTCAAGTACGTTATTACTGTTGGGTAGCAAGCATCTCACTCTCTGCAAGAATTCCGTTGT-----
-----------TTCTTTCATTCATCTCGTCGTGCGTGTGTGATTAACTGATTATATATGTGCCAGGAACCAGATGGAGCC
CAGGAAGCGGCACCTCGAGGTCGCGCTCGGTGAGGATGAGAACGACGGAGCCGGCTGCCACGGCGAGACGCCGACGACGA
CGA---GCTCGCCTTCTCAAGCCTCGTCGTCCTCTGCCGCACCGTTGCCGCTGCCACACCTCCTGC--------------
---------------CCATCTCCTCGCTGCGGCTGTCCCCGCCCGT------GACGGAGCAGGAGCAGGAGCAGGAGCAG
GAGAATCGCCACCGCAACGACGACCCGGAAGCAG---AACATGAGTA------ATTG----ATGGTTGTATCCTCTTTCT
CCCCACGACTGGGCCATCGACC--------------------AAAAATGAATGAGAGGCTCCTTTTGG---ATACAAA-G
TGTTGTTCTCATACATACCTATAACAACTTTGATTAGCCTTCTCATACACACACACATATAAACTTTGGTTAGCTTTCTA
GCTCATT-------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--
>chr3A_2573
AAAATT--------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------TAAAAACAAAATTTGAATTCAAATATTTTTGACGTATATATATTAAGTATTTTACTCAAAAGTGTCACGAAC
TATTCCCTGCCGTAGTGGTTAGTGCACCGCAGCTACAGCTTGCACGTATGTCGCGAGTTCGACCGCTGGTCATTGCAGCA
TTTTTAAACTTTTGCTTTTTAAAAAAAATAAAAAAAGAAAAATTGCGCGAGACCAGACTCAAACCCGCGACTTGCTGTTA
AGGAAAGTATGCCTTTGCCGCTAGGCCACTAGCAGTTCTTGTGGTAGAGAAGAGATGCTGCTTATTTAACCAGACAGTGA
ATGTTTGATTTCAAAAATTTCAAAATATTCGAGATATTTTGCTCGGTATAAGTGTTTCTCGAGGGGCGACGGTAAACGCG
GTAACCGCGCGAGATAGTGAAATTTCACTCGGTACCCAAAACGCTGGAGGGGAGGCGCCTGAGTAGATGCGGCGCCAGGG
TAGGATGGGTAGGGCCGAGGGAGGATGTTCTTTGTTTTGCTCAAGCGGGTGCGCACTGAGTAAAAATAGGAGCCCGCGGC
GCCCAGGAGTAAATTTTTTACTCTTCTAACCAGTTTAGGAGATCGGCTAGGTGCCGCTTGGAGGAGTAAAACTAAAATAT
ATTGCCTCTATTTACCGATTAAAAAAAATAAAAAAAATAAAAATTGCGCGAGGCCAGACTCAAACCCACGACTTGCTGTT
AAGGAAAGTATGCCTGCCGCTAGGCCACTAGCAGTTCTTGTGGTAGAGAAGAGATGCTGCTTATTTAACCAGACAGTGAA
TGTTTGATTTCAAAAATTTCAAAATATTCGAGATATTTTGCTCGGTATAAGTGTTTCTCGAGGGGCGACGGTAAACGCGG
TAACCGCGCGAGATAGTGAAATTTCACTCGGTACCCAAAACGCTGGAGGGGAGGCGCCTGAGTAGATGCGGCGCCAGGGT
AGGATGGGTAGGGCCGAGGGAGGATGTTCTTTGTTTTGCTCAAGCGGGTGCGCACTGAGTAAAAATAGGAGCCCGCGGCG
CCCAGGAGTAAATTTTTTACTCTTCTAACCAGTTTAGGAGATCGGCTAGGTGCCGCTTGGAGGAGTAAAACTAAAATATA
TTGCCTCTATTTACCGATTAAAAAAAATAAAAAAAAATAAAAATTGCGCGAGGCCAGACTCAAACCCACGACTTGCTGTT
AAGGAAAGTATGCCTGCCGCTAGGCCACTAGCAGTTCTTGTGGTAGAGAAGAGATGCTGCTTATTTAACCAGACAGTGAA
TGTTTGATTTCAAAAATTTCAAAATATTCGAGATATTTTGCTCGGTATAAGTGTTTCTCGAGGGGCGACGGTAAACGCGG
TAACCGCGCGAGATAGTGAAATTTCACTCGGTACCCAAAACGCTGGAGGGGAGGCGCCTGAGTAGATGCGGCGCCAGGGT
AGGATGGGTAGGGCCGAGGGAGGATGTTCTTTGTTTTGCTCAAGCGGGTGCGCACTGAGTAAAAATAGGAGCCCGCGGCG
CCGAGGAGTAATTTTTTTACTCTTCTAACCAGTTTAGGAGACTGGCTAGGTGCCGCTTGGAGGAGTAAAACTAAAATATA
TTGCCTCTATTTACCAATTAAAAAAATAAAAATAAAAAGAAAAATTGCGCGAGGCCAGACTCAAACCCGCGACTTGCTGT
TAAGGAAAGTATGCCTTTGCCGCTAGGCCACTAGCAGTTCTTGTGGTAGAGAAGAGATGCTGCTTATTTAACCAGACAGT
GAATGTTTGATTTCAAAAATTTCAAAATATTCGAGATATTTTGCTCGGTATAAGTGTTTCTCGAGGGGCGACGGTAAACG
CGGTAACCGCGCGAGATAGTGAAATTTCACTCGGTACCCAAAACACTGG-------------------------------
--
>SNPs
---SSS-SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS-----S-----S---S---------------S--S-S--SS
SS--S---SS-SS--S--SS-S-SS----S-SS-SS---S----S-SS--------------S-----------------
-------------------S--------------------------------S-SS----SSS-SSSSS-----------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------------------------S----------
----------------------------------------------------------S-S-------------------
--------------------------------------------------------------------------------
------------------S--S----------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------S------------------
------------------S-----------------------------S-------------------------------
-------------------------------------S----------------S-------------------------
--------------------------------------------------------------------------------
--------------------------------------S--------------S---S--S-------------------
----SS-----S--------------------------------------------------------------------
------------------------------------------------------------------S-S-----------
------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS--------S---S------
--------------S-S--S----S----------------------------------S--------------------
-------S------------------S-------S----S----S-------S-----------------S---------
-------S------------------S----------------------S--S---SSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSS-----SS------S---------------S-----SS---------------------S---------S---
S--------S---S---------SS-S----------------S----S---SS----------S---------------
--------------------SSSS----S---S-S--SS-----------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------S-----------S----S
-SS------S-----------S-----------SS-----SSS--S--S-S---------------------SS------
--SS------S-------S----------S---------------------S----------------------------
------S----------S-S--------S---------------S----SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SS
>forward_280
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------TGGACGTAAATGGCGGAACA----------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--
>reverse_1819
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------------CGCTGCAGATCCAAGAAGGA--
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--
>forward_589
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------AAGGCCTCATCCATTTGGCA---------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--
>reverse_3074
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---------------------------------ATCGCTTCTAGTGTGGCAGG---------------------------
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--
