>input_sequence_62351
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-----------------------------------------------------------------ATGGATCCGGTGGCC
GCGGCGGCGCACGGCGGGGGGCACCACTTCGGGCCGCCGGTGGGGACGTTCCACCCGTTCCACGGCCACTTCCCGGGCCA
GCAGCAGCCGCT---GCAGCAGCACCCGGCGTTCCAGCATTTCCAGGACCACCACCAGCAGCTGCTCGGCGGGATGCTGG
CCAAGCAGGAGCTCGTGGACGAGAGCAACACCACCATCAACAGCGGCGGCAGCAACAACGGCAACAGCGGCGGCGAGGGC
GAGCAGCACATGGGCGGC---GGCGGCGGCGGCGGAGGAGGATCCGCGCAGCAGCAGCACGG------GGGCGGCGGAGG
AGGCGAGGAGGGGCAGCAGCAGCAGCA---GGCGCTGGCGGTGATGCGGCGGCCCAGGGGCCGACCCGCGGGGTCCAAGA
ACAAGCCCAAGCCGCCCGTCATCATCACGCGGGACAGCGCCAGCGCGCTGCGGGCGCACGTCCTCGAGGTCGCCGCCGGA
TGCGACGTCGTCGACTGCGTCGCCGCCTTCGCGCGCCGCCGCCAGGTCGGCGTCTGCGTGCTCAGCGGCACGGGCGCCGT
CGCCAACGTCTCCGTCCGCCAGCCCGGCGGTGCCGTCGCCACGCTCGCCGGCTGCTTCGACATCCTCTCGCTCTCCGGCT
CCTTCCTGCCCCCGCCGGCGCCTCCTTCCGCCACGGGGCTCACCGTGTACGTCTCCGGCGGCCAGGGCCAGGTCGTGGGC
GGCTCGGTCGCCGGCGCGCTCGTGGCCTCCGGCCCCGTGGTCATCATGGCCGCCTCCTTCGGCAACGCCTCCTACGAGCG
CCTCCCCCTCGACGACGAAGAGCCATCCGCAGCGCAGGGCCTCGCGCAGGCGCACTCCTCCCCACCGCCGCTCCCATTGC
CGACACACCAGCTCCAGCAGCAGCAGCAGCCGTCCTCGTCCCTGGCGCAGGCGCCCGACCACCACATCCCCCACAACCTG
ATGAACGGCCTCCAGCAGCTCCCCGGCGACCCCTACGGCTGGACCACCCCGGGCGGCAGCGGCGGCCGCGTCTCGCCCTA
CTGA----------------------------------------------------------------------------
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>chr7D_1_TraesCS7D01G072200
AACCAGTGTTCCATCCCCATAGAAATAACGAAATGGAACTACTTTTGGAATTATCGGCCTCCTATATACTGCATTTAAAT
GATGATGTCCAAGACCACGTCAACTTATATTTCTTAAAAAAGAATCTAGTACTTCACTAGTGTGCACTTATTTCTCTGCT
CATCATCGTGACACATATATAGGGTTTCAGTTATTCGATAACAAAGATATCGTTAGCCAAACCGGAATAACCAAAGTGTT
TTATGTAATTTTAAAATTGTTTCATGAGACTTCTTCATTGAGGATGACTTTTCAGCCCAAATTTTTTATTTAATGTTGTG
GAATTTGAAATAACCTCATGAGACTTCCAACTCAGTATCTTTCCTTAAAAAAAAACTATGGTGGACTAATTGATCTTTAA
ATCAATTTATGTTTTTCATGGTCATCTCCGAAAATTTTCCATCTCGGAATATTTTCGATGAAAAGATGAACTTTCTGC--
-CAAATTCTTTGATAATTTAATTCAAATTTGATCTGATATTTTGGCTCACAAATATCTCCACCGAAATTCGGGCAGGAAA
TGATTCAAACCGCGGGCGGGCGGCCGGCGAGGCGATGAGGCATGGGTATAGCTCTACCGGCCCGCGCGGTCAACACCGCG
CTCGCCTGCAACGAGACATGCATGTCAGGGGGCCGGCGACGTGGCCAGCACCAGCGGCAGTACTGATCTCATCTTCGTCT
GACCGCCCGACCCGATCGCCATCAGGAGACGACGACCCCAGGGCCGGAGCTCCGGTGGGCCCCACCCCACCACCACCCTC
GCCCTCGTGTGGGCCCCGCGCCCCCC-TCATC--CCCCCAATCTACGCGCTTGTCTTAACCCCCC--TCCCTACCCTCCT
CCGAGCACCGCACCAAACGCAAAACCCGGCCTTTGAGCTTTGACCGCCTCCACCACTCCACCG-----------------
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-------------------------------------------------------------------------------T
CCGTCGTCCGTCGTCGTCACCGCGTTCGTCTTGCTTGCAAGCGTAGCCGGCAGGGATTTGG-TCGATGGATCCGGTGGCC
GCGGCGGCGCACGGCGGGGGGCACCACTTCGGGCCGCCGGTGGGGACGTTCCACCCGTTCCACGGCCACTTCCCGGGCCA
GCAGCAGCCGCT---GCAGCAGCACCCGGCGTTCCAGCATTTCCAGGACCACCACCAGCAGCTGCTCGGCGGGATGCTGG
CCAAGCAGGAGCTCGTGGACGAGAGCAACACCACCATCAACAGCGGCGGCAGCAACAACGGCAACAGCGGCGGCGAGGGC
GAGCAGCACATGGGCGGC---GGCGGCGGCGGCGGAGGAGGATCCGCGCAGCAGCAGCACGG------GGGCGGCGGAGG
AGGCGAGGAGGGGCAGCAGCAGCAGCA---GGCGCTGGCGGTGATGCGGCGGCCCAGGGGCCGACCCGCGGGGTCCAAGA
ACAAGCCCAAGCCGCCCGTCATCATCACGCGGGACAGCGCCAGCGCGCTGCGGGCGCACGTCCTCGAGGTCGCCGCCGGA
TGCGACGTCGTCGACTGCGTCGCCGCCTTCGCGCGCCGCCGCCAGGTCGGCGTCTGCGTGCTCAGCGGCACGGGCGCCGT
CGCCAACGTCTCCGTCCGCCAGCCCGGCGGTGCCGTCGCCACGCTCGCCGGCTGCTTCGACATCCTCTCGCTCTCCGGCT
CCTTCCTGCCCCCGCCGGCGCCTCCTTCCGCCACGGGGCTCACCGTGTACGTCTCCGGCGGCCAGGGCCAGGTCGTGGGC
GGCTCGGTCGCCGGCGCGCTCGTGGCCTCCGGCCCCGTGGTCATCATGGCCGCCTCCTTCGGCAACGCCTCCTACGAGCG
CCTCCCCCTCGACGACGAAGAGCCATCCGCAGCGCAGGGCCTCGCGCAGGCGCACTCCTCCCCACCGCCGCTCCCATTGC
CGACACACCAGCTCCAGCAGCAGCAGCAGCCGTCCTCGTCCCTGGCGCAGGCGCCCGACCACCACATCCCCCACAACCTG
ATGAACGGCCTCCAGCAGCTCCCCGGCGACCCCTACGGCTGGACCACCCCGGGCGGCAGCGGCGGCCGCGTCTCGCCCTA
CTGATCATCAACCGATCCACCGACGCGCATGGAGGGACGGAAACGAAGCTAAGAGTCCATCCATTATCAACCCCTACCTC
CTCTGCTAATTATGCTCCT----CATCAATCAATCAATCGATCTCGATGCCGTTGTTACTCTT-GTTACAGACTGCTTGC
AAGTAGCTAGCAAGGGCATCCATGGACCATGGCGAAACAAACTAGTGTTTCTTAAGTAGTGTGTCAATGTTAATTCCATG
TTTTTACCTTCCAC------CCCCTTTTACCCAATCAAGCAAGCAATGCATGCACCATGTAGGATCAATGGAGAGGAAGG
GCTTAGTGGTAACTACAATCAAGTAGTAGAAGCTTTGTTGGTTCGTTCATATCTTAATCCATCTGTCTCTATCTTTGTCC
TGATGCTACATGCATGACTAGCTAGCTTTGAACAAACCTGCGTATTTTATGGAGGATGATGGGTGACTCCCTTGTTGTTT
CTCTTGGCCCAGTTCGATCGACCATACTGTATTTTTTATATGTTTCTGCATTCATACATACAAATCGATCGATGACTTGG
TTAGAGAGAGAAACGGACACACAGATGGTATCAGTCGCACGAACAACTTCACCAATTCTCCTAGTATGTTGTTTTCCCAA
TTTTGGTTGCTTGTTTGCTGGCTGGAACAGCGCTGCCCAACCTAGCAGCAAGCCCAACCACTACACCAGCACACCACACA
---------CATACACAACCTTGCTATATTTTATGTCTCGGACCGGACATATATGCTCACAGATGTCTCCTTGTGCTTGA
TTCTCTTTGAGACACCCACATACGCCTGGCTACAGGTGATGAGAGATCTATACGGTCTCAGAATAACTCAAAAATGATGC
TCTAATTAGTGGTCCAATTTCTCTAACGCTTTCTGTCCATAATGTTTTGGACATTGGTGTGACTC-GAGATTCACAAAAA
GGATTGATATTGTTACCCA---AAAAGATAGAGTTTAGCTATATGCCTGAA---TATACATACACAATGGT
>chr4A_430
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-----------------------------GAATATTTGCCATCTTGGAATATTTGCCATGAAAGATGATTT----TTTGC
ACAAATTCTTTGATAATGATTTTTGAATTTGATATGAGATTTTGGGTGGCAAGTATCTGCACCGAAATTCGGGCAGGAAA
TGATTCAAACCGCGGGCGGGCGGCCGGCGAGGCGATGAGGTATGGGTGTAGCTCTACCGGCCCGCGCGGTCAACACCGCG
CTTGCCTGCAACAAGACATGCATGTCAGGGGGCCGGCGACGTGGCCAGCACCAGCGGCAGTACTGATCTCATCTTCGTCT
GACCGCCCGACCCGATCGCCATCAGGGGACGACGACCCCAGGGCCGGAGCTCCGGTGGGCCCCACCCCACCACCACCCTC
GCCCGCGTGTGGGCCCCGCGCCCCCC-TCCCTCACCCCCAATCTACGCGCTTGTCTTAACCCCCCCCTCCCTACCCTCCT
CCGAGCACCGCACCAAACGCAAAACCCGGCCTCTGAGCTTTGACCGCCTCCACCACTCCACCG-----------------
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-------------------------------------------------------------------------------T
CCGTCGTCCGTCGTCGTCACCGCGTTCGTCTTGCTTGCAAGCGTAGCCGGCAGGGATTTGG-GCGATGGATCCGGTGGCC
GCGGCGGCGCACGGCGGGGGGCACCACTTCGGGCCGCCGGTGGGGACGTTCCACCCGTTCCACGGCCACTTCCCGGGGCA
GCAGCGGCCGTTGCAGCAGCAGCACCCGGCGTTCCAGCATTTCCAGGACCACCACCACCAGCTGCTCGGCGGGATGCTGG
CCAAGCAGGAGCTCGTGGACGAGAGCAACACCACCATCAACAGCGGCGGCAGCAACAACGGCAACAGCGGCGGCGAGGGC
GAGCAGCACATGGGCGGCGGCGGCGGAGGAGGAGGAGGAGGATCCGCGCAGCAGCAGCAGCAGCACGCGGGCGGCGGAGG
GGGCGAGGAGGGGCAACAGCAGCAGCAGCAGGCGCTGGCGGTGATGCGGCGGCCCAGGGGCCGGCCCGCGGGGTCCAAGA
ACAAGCCCAAGCCGCCCGTCATCATCACGCGGGACAGCGCCAGCGCGCTGCGGGCGCACGTCCTCGAGGTCGCCGCCGGA
TGCGACGTCGTCGACTGCGTCGCCGCCTTCGCGCGCCGCCGCCAGGTCGGCGTCTGCGTGCTCAGCGGCACGGGCGCCGT
CGCCAACGTCTCCGTCCGCCAGCCCGGCGGCGCCGTCGCCACGCTCGCCGGCTGCTTCGACATCCTCTCGCTCTCCGGCT
CCTTCCTGCCCCCGCCGGCGCCTCCGTCCGCCACGGGGCTCACCGTGTACGTCTCCGGCGGCCAGGGCCAGGTCGTGGGC
GGCACGGTCGCCGGCGCGCTCGTGGCCTCCGGGCCCGTGGTCATCATGGCCGCCTCCTTCGGCAACGCCTCCTACGAGCG
CCTCCCCCTCGACGACGAAGAGCCATCCGCAGCGCAGGGCCTCGCGCAGGCGCACTCCTCCCCACCGCCGCTCCCATTGC
CGACACACCAGCTCCAGCAGCAGCACCAGCCGTCCTCCTCCCTGGCGCAGGCGCCCGACCACCACATCCCCCACAACCTG
ATGAACGGCCTCCAGCAGCTCCCCGGCGACCCCTACGGCTGGACCACCCCGGGCGGCAGCGGCGGCCGCGTCTCGCCCTA
CTGATCATCGACCGATCCATCAACGCACATGGAGGGACGGAACCGAAGCTAAGAGCTCATCCATTATCAACTCCTATCTC
CTCTGTTAATTATGCTCCTCAACCATCAATCAATCGATCGATCTCGATGCTGTTGTTACTCTT-GTTACAGACTGCTTGC
AAGTAGCTAGCAAGGGCATCCATGGACCATGGTGAAACAAACTAGAGTTTCTTATGTAGTGTGTTAATGTTAATTCTATG
TTTTTACCTTCCAGCTTCCACCCCTTTTACCCAATCAAGCAAGCAATGCATGCACCATGTAGGATCAATGGAGAGGAAGG
GCTTAGTGGTAATTACAATCAAGTGGTAGAAGCTTTGTTGGTTCATTCATATCTTAATCCATCTGTCTCTATCTTTGTCC
TGATGCTACATGCATGACTAGCTAGCTTTGAACAAACCTGCGTATTTTATGGAGGATGATGGGTGTCTCTCTTGTTGTTT
CTCTTGGGTCAGTTCGATCGATCATACTGTATTTTTTATACGTTTCTGCATTCATACATACAAATCGATCGATGACTTGG
TTAGAGAGAGAGACAGACGCACAGATGGTATCAGTCGCACGAACAACTTCACCAATTCTCCTAGTATGTTGTTTTCCCA-
TTTTGGTTGCTTGTTTGCTGGCTGGAACAGCGCTGCACAACCTAGCAGCAAGCCCAACCACTACACCAGCACACCACACA
CATATGACAGACACACAACCTTGCTATATTTTATGTCTCGGACCGGACATATATGCTCACAGGTGTCTCCTTGTGCTT-A
TTCTCTTTGAGACACCCACATACCTGGCTT---AGGTGATGAGAGAATCA-ACAGCCTCTGAATAACTCAAAAATGGTAC
TCGAAT----GGTCCAATTCATCGAACCCTGTCTGTCCATAATGTTTTGGACACTGGTGTGAGTCAGACATAAACA-AAA
GGATTGATGTTGTTATCTAAAGAAAATGTAGGGATTAGCTATATGCTTGAAATATACATATGCACAATGGT
>chr7A_434
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---------------------------------ATTTGCCATCTTGGAATATCTTCGATGAAAGATGGTTTTTTTTTTGC
ACAAGTTCTTTGACAATGATTTTTGAATTTGATATCAGATTTTGGGTCGCAGGTATCTCCACCGAATTTTGGGTAGGAAA
TGATTCAAACCGCGGGCGGGCGGCCGGCGAGGCGATGAGGTATGGGTGTAGCTCTACCGGCCCGCGCGGTCAACACCGCG
CTTGCCTGCAGCGCGACATGCATGTCAGGGGGCCGGCGACGTGGCCAGCACCAGCGGCAGTACTGATCTCATCTTCGTCT
GACCGCCCGACCCGATCGCCATCAGGAGACGACGACCCCAGGGCCGGAGCTCCGGTGGGCCCCACCCCACCACCACCCTC
GCGCTCGCGTGGGCCCCGCGCCCCCCCTCACC--CCCCCAATCTACGCGCTTGTCTTAACCCCCCC-TCCCTACCCTCCC
CTCCGAGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNT
CCGTCGTCCGTCGTCGTCACCGCGTTCGTCTTGCTTGCAAGCGTAGCCGGCAGGGATTTGGATCGATGGATCCGGTGGCC
GCGGCGGCGCACGGCGGGGGCCACCACTTCGGGCCGCCGGTGGGGACGTTCCACCCGTTCCACGGCCACTTCCCGGGC--
-------------CAGCAGCAGCACCCGGCGTTCCAGCATTTCCAGGACCACCACCACCAGCTGCTCGGCGGGATGCTGG
CCAAGCAGGAGCTCGTGGACGAGAGCAACACCACCATCAACAGCGGCGGCAGCAACAACGGCAACAGCGGCGGCGAGGGC
GAGCAGCACATGG---GCGGCGGCGGCGGAGGAGGAGGAGGATCCGCGCAGCAGCAGCAGCAGCACGCGGGCGGCGGAGG
AGGCGAGGAGGGGCAGCAGCAGCAGCAGCAGGCGCTGGCGGTGATGCGGCGGCCCAGGGGCCGGCCCGCGGGGTCCAAGA
ACAAGCCCAAGCCGCCCGTCATCATCACGCGGGACAGCGCCAGCGCGCTGCGGGCGCACGTCCTCGAGGTCGCCGCCGGA
TGCGACGTCGTCGACTGCGTCGCCGCCTTCGCGCGCCGCCGCCAGGTCGGGGTCTGCGTGCTCAGCGGCACGGGCGCCGT
CGCCAACGTCTCCGTCCGCCAGCCCGGCGGCGCCGTCGCCACGCTCGCCGGCTGCTTCGACATCCTCTCGCTCTCCGGCT
CCTTCCTGCCCCCGCCAGCGCCTCCTTCCGCCACGGGGCTCACCGTGTACGTCTCCGGCGGCCAGGGCCAGGTCGTGGGC
GGCTCGGTCGCCGGCGCGCTCGTGGCCTCCGGCCCGGTGGTCATCATGGCCGCCTCCTTTGGCAACGCCTCCTACGAGCG
CCTCCCCCTCGACGACGAAGAGCCATCCGCAGCGCAGGGCCTCGCGCAGGCGCACTCCTCCCCACCGCCGCTGCCATTGC
CGACACACCAGCTCCAGCAGCAGCACCAGCCGTCCTCGTCCCTGGCGCAGGCGCCCGACCACCACCTCCCCCACAACCTG
ATGAACGGCCTCCAGCAGCTCCCCGGCGACCCCTACGGCTGGACCACCCCGGGCGGCAGCGGCGGCCGCGTCTCGCCCTA
CTGATCATCAACCGATCCACCGACGCACATGGAGGGACGGAACCGAAGCTAAGAGTTCATCCATTATCAACTCCTATCTC
CTCTGCTAATTATGCTCCTCA----TCAATCAATCAATCGATCTCGATCCTGTTGTTACTCTTTGTTACAGACTGCTTGC
AAGTAGCTAGCAAGGGCATCCATGGACCATGGTGAAACAAACTAGTGTTTCCTAAGTAGTGTGTCAATGTTAATTCTATG
TTTTTACCTTCCA-------CCCCTTTTACCCAATCAAGCAAGCAATGCATGCACCATGTAGGATCAACGGAGAGGAAGG
GCTTAGTGGTAATTACAATCAAGTAGTAGAAGCTTTGTTGGTTCGTTCATATCTTAATCCATCTGTCTCTATCTTTGTCC
TGATGCTACATGCATGACTAGCTAGCTTTGAACAAACCTGCGTATTTTATGGAGGATGATGGGTGACTCCCTTGTTGTTT
CTCTTGGGCCAGTTCGATCA---------TATTTTCTATACGTTTCTGCATTCATACATACAAATCGAT----GACTTGG
TTAGAGAGAGAAACGGACACACAGATGGTATCAGCCGCACGAACAACTTCACCAATTCTCCTAGTATGTTGTTTTCCCA-
TTTTGGTTGCTTGTTTGCTGGCTGGAACAGCGCTGCACAACCTAGCAGCAAGCCCAACCACTGCACCAGCACACAC----
-------CACACACACAACCTTGCAATATTTTATGTCTCGGACCGGACATATATGCTCACAGATGTCTCCTTGTGCTTGA
TTCTCTTTGAGACACCCACATACGCCTGGCTACAGGTGATGAGAGATCTATACGGTCTCAGAATTACTCAAAAATGGTGC
TCGAATCAGTGGTCCAAATTCTA-AACGCTTTTTCTCCATAATGTTTTGGACATTGGTGTGACTC-GACATTCACA-AAA
GGATTGATGTTGTTATCTAAAAATG-TGTAGACATTAGCTATATGCTTGAAACATACAT--GCACAATGGT
>SNPs
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSS---S----S------S------------------SSSS-SSS---S-SS--
-----------------SSSS--SS--------S---S-------S--S---S---------------------------
----------------------------------------S------S--------------------------------
--S-----------------------------------------------------------------------------
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------------------------------S-------------------------------------------------
--------------------------------S-----------------------------------------------
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-----S----S----------------------------------------------S----------------------
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-----------------------------S--S--------------------------SSS------------------
---------------------------------------------------------------S----------------
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------------------------------S-------------------------------------------------
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-------------------------S------------------------------------------------------
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--------------------------S---------------S-------------S--------------S----S---
--------------------------------------------------S-----------------------------
--------------------------------S-------------------------------------------S---
-------------S------------------------------------------------------------------
------------S-------------------------------------------------------------------
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-------S-------------S------------------S---------------------------------------
-------------------------------------------------------------------------------S
------------------------------------S-------------------------------------------
-----------S--------------------------------------------------------------------
----------------------------------------------------------------------------S---
--S---S----------------S--------------------------------------------S-------S---
--------S------S-S--------SS-----S------------S---------S-S--S---------
>forward_105
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-----TGTCCAAGACCACGTCAACT-------------------------------------------------------
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>reverse_2347
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--------------------------GCATGGAGGGACGGAAACG-----------------------------------
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