>input_sequence_62318
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--------ATGAGGCGGACCACGGCGTTGCTGCTGCGCCACGTCGGCGGCGGGATCCCGCAGGCGCTCGCCGACATGCTC
GTCTGCCCCCTGTCCAAGAAGCCTCTCAGGTAGCCAAGCCAGGCAATATCTGGGCCCTCCTACTTCCACACTACTCCCTT
TGATTGATCTCGTCTCTTTCCTTTGCCCACCAGGTACTGCGAGGCCAGCGGCTCTCTGGTCAGCGACGCCGTCGGCATGT
CCTTCCCGGTGAGTTCCGGTGTCCCCTCCCGCTCCTCTATGTGCCGCGCTTGTTGAATGCTTGGGCCTGCAACCCTCTGG
TGGTTTTAGCCGGTATATTGCATGCTTGCGGCTTACCTGTTTGCTGTATTGCCTCGGCGAAAATGGAAACACATTCATCA
TGTGCAAAACGAAAAGGGGGCCGATTTCCTAGCATCGCTACTTAATGGCACCATGAAATCCGCAGTGGAGACTCAATTCA
GGAAGTAGCTAGTGATAACTAGTCTTCACACAGCATGTCTTTGTGATTATCGAGAATTTGACTGTTTGA--TGAAGTTTT
TGAGCATGAGAGAGGATCATGTTACTAGAA--------------------------------------------------
---------------------------------------------------------------------------AGTAC
TACTGGTGTTAGCATGCTGGGATCAGCGCGTGTGCAGTGGCGTGT-GGGACAGACTCACATACTAGAGAGAGAAGGTGAG
AGGAGAAAATGATTAAAGTGCACACAT--AATGGCTAACAACCAACTGATTTGATGTTCTAAAACGGGGATATTTTACGT
CAACTTTGAACTTTTAGGATAAACATGTT---------------------------------------------------
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--------------------------CCTATGGAATTTCAGGATCTCAATTTATTGCTTCCTGTAGCATTTCATCAATTT
CTTGTGGCATCTCTGGCATGCTTACACCACTCATTGTGAACAGCATCGCTGGCATTTCCACTCATCATTTCTGCTTAGCA
GTTAGCCCTGATTTCATCCTGACATTAACTGCAGATAGTAGATGGAATTCCTTGTCTCCTTCCGAAAGACGGCAAGTTGC
TCGAGGACCACCAGAGGGAATCAGGACATGAAACCAGCCCTAGGGATTCCTCTGATTGA---------------------
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>chr1A_1_TraesCS1A01G135800
TCAAGTCGAGTGTTCGATCTTGGAAGTGCGAGCAGCGCTCACCACGATCTTGGCCGTGAGGGGATCGAAGCCGCAGCCAC
CGGAGGCGAAGCTGACGCCGGTGAGGAGGTCCGAGTCGCTGAGCTCCGTGCCGAGGTACGCTGGCACGTACTGCTTCAGG
CCCATCCGGGTGGCTGG----ATCAAATGCAAACCATCAGTTTCTG-------------------TGCCATGCATACATG
AACCGAGTAGCTAGAGAGAGTCGTCAATGGAGTGCCTGCCATGCATATACCCATACCGAGGATGTCGCCGACGATCTTGC
CGTTGCTGAACCTGCCGGTGGCGTTGTGGGCGGGGAAGTCCTGGCCGTAGGGAGCGAAGTCGCATCGCACCGCCGTGGTG
AGGCCGTTGTTGTTGCCCGGGTCCACGATGGAGTCCCCGAACAGGATCAGCGCCGGCGGCCGCGTCTGGCTCGAGCCCGG
CTGGGAAGCGGCAGTGCAGCAGGAGGGACGCGCA---AGCATCAATGCCACGACTGCTGTGGCGATGAGAATGAGGCGGC
GCGTTGCTCCTCCGGCTCCGGGCGTGCATTCGCTGGCCATGGCCATGCCTGCTCCGGTGTTGGTGCTGATCTCTGATCAG
CTCACTCACACCACACG-------------CCTACCGCTGCTCTGTCCGATCGATGCTTCTCTTGTAGCCAGAGCGCATT
GTAGTTATAGATAGAGAGACATTCAATCTCATCTTAACTTGTGTAATTCCCTCCCCATTTCTTGCAAGATTGAGACTCCA
AATTCACAAGTTTTGGCCACCTCGGTTAATGCAATTTTGTTGTTTCGTCAAGCGAGGTGACACACGTCCGTGTGAGCATT
GTCTTCGTTCTTTTAGCGG---AATCTTGGAATGGAAATTTTCGTGCCTACCCCAACCGTTCGCCACCTTCTAGAGATGG
GCTGGGTTGTC-----TGAGCCGAGCGGATGGGGCAGGTTGGGCTTTCAAAGTTTTGACCGGCCCGATCCACAACCCTGA
-CAGGACGATGAGGCGGACCACGGCGTTGCTGCTGCGCCACGTCGGCGGCGGGATCCCGCAGGCGCTCGCCGACATGCTC
GTCTGCCCCCTGTCCAAGAAGCCTCTCAGGTAGCCAAGCCAGGCAATATCTGGGCCCTCCTACTTCCACACTACTCCCTT
TGATTGATCTCGTCTCTTTCCTTTGCCCACCAGGTACTGCGAGGCCAGCGGCTCTCTGGTCAGCGACGCCGTCGGCATGT
CCTTCCCGGTGAGTTCCGGTGTCCCCTCCCGCTCCTCTATGTGCCGCGCTTGTTGAATGCTTGGGCCTGCAACCCTCTGG
TGGTTTTAGCCGGTATATTGCATGCTTGCGGCTTACCTGTTTGCTGTATTGCCTCGGCGAAAATGGAAACACATTCATCA
TGTGCAAAACGAAAAGGGGGCCGATTTCCTAGCATCGCTACTTAATGGCACCATGAAATCCGCAGTGGAGACTCAATTCA
GGAAGTAGCTAGTGATAACTAGTCTTCACACAGCATGTCTTTGTGATTATCGAGAATTTGACTGTTTGA--TGAAGTTTT
TGAGCATGAGAGAGGATCATGTTACTAGAA--------------------------------------------------
---------------------------------------------------------------------------AGTAC
TACTGGTGTTAGCATGCTGGGATCAGCGCGTGTGCAGTGGCGTGT-GGGACAGACTCACATACTAGAGAGAGAAGGTGAG
AGGAGAAAATGATTAAAGTGCACACAT--AATGGCTAACAACCAACTGATTTGATGTTCTAAAACGGGGATATTTTACGT
CAACTTTGAACTTTTAGGATAAACATGTT---------------------------------------------------
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--------------------------CCTATGGAATTTCAGGATCTCAATTTATTGCTTCCTGTAGCATTTCATCAATTT
CTTGTGGCATCTCTGGCATGCTTACACCACTCATTGTGAACAGCATCGCTGGCATTTCCACTCATCATTTCTGCTTAGCA
GTTAGCCCTGATTTCATCCTGACATTAACTGCAGATAGTAGATGGAATTCCTTGTCTCCTTCCGAAAGACGGCAAGTTGC
TCGAGGACCACCAGAGGGAATCAGGACATGAAACCAGCCCTAGGGATTCCTCTGATTGAATCCACGTTGTTGTACAAGCC
GGCAACATCGTTCTGTATTTAAAAAGTAATCGAGATGGAAGCAAGAGTATGTGCTGTCCTCAAACTGTTTCTTGTCGCCG
TAAATCATTCTCACGTTGATTTGTACTGACTATTTTGCACAATGGAAATAAAATTATTACATGGTATTGCTCTTAGCCGT
AATTTATTTCGGCTTCATGTTTCTCTTTGCTGCTGTACCTGTAGAGTGAACCTTGCGTACTACTCCCTTCGTCACATAAT
ATAAGAGTGTTTTTGACACTACAATAGTGTAAAAAACGGAGAATAGTGTTTTGGCTCTCGGCCTCCATGGAAGCCGTTCT
TTTTTAATTCAAAATTTTGGTTTAAAAGAAATCTGAAAAAAATTGTACAAGTAAACAAGGATATGAGGCGTATGTGTGTA
AAGTTTCAGGATGAAATGCGTTGAAATGCGACCTGTACAAAAAAGACAAATTCATGGTCTTGAAGGATGAATTGTATCAT
GTATTAAAAAGCCTTAGATTTGTCTTTTTTGCACCGCCCTCATTTCAAAGTATTTCGTTCTGAAAATTTACACACTTGTG
CACTATGCCTTCATCTATCTCTGTATTTG-TTTTCAGAATTTTTTAAAATAAAATATGAATTTTCATGAATTTTGAATTT
TGCATTTGAAGGCCTCCATGGAGCTCGGCCTCCAAAAGCAATTTCCGGT-AAAAATGCTCTTATATTATGGGACGGAGGG
AGTAAATCAGAAAAACCCTAGAATCCGGATGTCAATGTTAGACGATGCTTTGGTCTACTGTTG-----------------
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---------------------------------------GACTTGGTGTTACCGGTCAGAGCTGGTCGTACGCTTCACCC
ACCCACCGCCCTTGCATGGCGCATGCAAGGCTGTTAGCCACACTCTATCTT-CCCATCGATCTAGGATCGATTGTTAGGC
CCTCTTTGATTTGCAGGATTTTCAAAACACGGGAATAGGGAAAATACATGATTTGAGTGGCATGTCCACTTGAATCCT
>chr1B_34
---------------------------------AGCGCTCACCACGATGTCGGCCGTGAGGGGGTCGAAGCCGCAGCCAC
CGGAGGCGAAGCTGACGCCGGTGAGGAGGTCCGAGTCGCTGAGCTCCGTGCCGAGGTACGCCGGCACGTACTGCTTCAGG
CCTATCCGGGTGGCTGGCAGGATCAAATGCCAACCATCAGTTTCAATGCCTGCCATGCCATGCCATGCCATGCATGCTTG
AACCTTACG-----------------------------------ATATACCCGTACCGAGGATGTCGCCGACGATCTTGC
CGTTGCTGAACCTGCCGGTGGCGTTGTGGGCGGGGAAGTCCTGGCCGTAGGGCGCGAAGTCGCACCGCACCGCCGTGGTG
AGGCCGTTGTTGTTGCCCGGGTCCACGATGGAGTCCCCGAACAGGATCAGCGCCGGCGGCCGCGTCTGGCTCGAGCTCGG
CTGGGAAGCGGCAGTGCAGCAGGAGGGGCGCACA---AGCATCAATGCCACGAGTGCTGTGATGATGAGAATGAGGCGGC
GCGTTGCTCCTCCGGGTCCGGGCGTGCATTCACTGGCCATGGCCATGCCTGCTCCGGTGTTGGTGCTGATCAGCTC---G
CTCAGTCACACCACGCCTCCTCCTCCTCCTCCTGCTGCTGCTCTGTCCGATCGATGCTTCTCTTGTAGCCAGAGCGCATT
GTAGTTATAGATAGAGAGACCTTCAATCTCATCTTAACTTGTGTAATTCCCTCCC-ATTTCTTGCAAGATTGAGACGACA
CATTCACAAGTTTCGGCTACCTCGGTTAATGCATTTTTGTTGTTTCGTCAAGTGAGGTGACCCGCGTACGTGTGAGCATT
GTCTTCGTTTTCCTTGGCGGAAAATCTTGGAATGGAAATTTTCGTGCCTACCCCAACCGTTCGCCACCTTCTAGAGAT--
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>chr1D_36
-----------------------------------CGCTCACCACGATCTCGGCCGTGAGGGGGTCGAAGCCGCAGCCAC
CGGAGGCGAAGCTGACGCCGGTGAGGAGGTCCGAGTCGCTGAGCTCCGTGCCGAGGTACGCCGGCACGTACTGCTTCAGG
CCCATCCGGGCGGCTGGCAGGATCAAATGCCAACCATCAGTTTCAATGCCTGCCATGCCATGCCATG-----CATGCTTG
AACCTTATG-----------------------------------ATATACCCATACCGAGGATGTCGCCGACGATCTTGC
CGTTGCTGAACCTGCCGGTGGCGTTGTGGGCGGGGAAGTCCTGGCCGTAGGGCGCGAAGTCGCACCGCACCGCCGTGGTG
AGGCCGTTGTTGTTGCCCGGGTCCACGATGGAGTCCCCGAACAGGATCAGCGCCGGCGGCCGCGTCTGGCTCGAGCCCGG
CTGGGAAGCGGCAGTGCAGCAGCAGGGACGCTGCAGCAGCATCAATGCCACGAGTGCTGTTATGATGAGAATGAGGCGGC
GCGTTGCTCCTCCGGCTCCGGTCGTGCATTCGCCGGCCATGGCCATGCCTGCTCCGGTGTCGGTGCTGATCAGCTC---G
CTCACTCACACCACG------------CCTCCTGCTGCTGCTCTGTCCGATCGATGCTTCTCTTCTAGCTAGAGCGCGTA
ATAGTT----ATAGAGACACCTTCAATCTCATCTTAACTTGTGTAATTCCCTCCCCATTTCTTGCAAGATTCAGACTCCA
AATCCACAAGTTTCGGCTACCTCGGTTAATGCATTTTTGTTGTTTCGTCAAGTGAGGTGACACACGTCCGTGTGAGCGTT
GTCTTCGGTTTTTTAGCGG---AATCTTGGAAGGGAAATTTTCGTGCCTGCCCCAACCGTTCGCCACCTTCTAGAGATGG
GCTGGGTTGTATTGTGTGAGCCGAATGGATGCCGCAGGTTGGGCTTTCAAAAACTTTACCGGCCCGATCCAAAATTCTTG
GCAGGACGATGAGGCGGACCACGGCGTTGCTGCTGCGCCACGGCGGCGGCGGGATCCCGCAGGCGCTCGCCGACGTGCTC
GTCTGCCCCCTGTCCAAGAAGCCTCTCAGGTAGCCAAGTCAGGCAATATCTGGCCCCTCCTACTTCCACAATAC--CCTT
TGATTGATCTCGTCTCTTTCCTTTCCCCACCAGGTATTGCGAGGCCAGCGGCTCTCTGGTCAGCGACGCCGTCGGCATGT
CCTTCCCGGTGAGTTCCGGTGCCCCCTCCCGCTCCTCTATGCGCCGCGCTTGTTGAATGCTTGGGTCTGCAACCCTCTAG
AGGTTTTAGCCGCTATTC--CATGCTTGCGGCTTACCTGTTTGCTGTATTGCCTCCGCGAAAATGGAAACCCATTCAACA
GATGTAAAACGAAAAGGGGGC-GATTTCCTAGTACCTTTATGCAATGAAAACATAAAATGCGCAGAAGAGACTCAATTCA
GGAAGTAGCTGGTGATAACTAGTCTTCAGACAGCATCTCTCTATGGTTATCGAGAATTTCACTGTTTGAGATGAAGTTTT
AGAACATGGGAGATGCTCGTATTACCAAAG--------------------------------------------------
--------------------------------------------------------------------------------
TACTGGTGTTAGCATGCTGGGATCAACGCGTGTGCAGTGGTGTGTGGGGACAGACTCACAGACTAGAGTGGTACGGTGA-
--GAGAAAATGATTAAAGTGCACA--T--AATGGCTAACAACCAACTGATTTGATGTTCTGAAACAGGGATATTTTATGT
CAACTTTGAACTTTTAGGATAAACATGTT---------------------------------------------------
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--------------------------CCTATGGAATTTCAGGATCTCAATTTATTGCTTCCTGTAGCATTTCATCAATTT
CTTGTGGCATCTCTGGCATACTTACATTACTCCTTGTGAACAGTATCTCTGGCATTTCCACTCATCATTTCTGCTTAGCA
GTTAGCCCTGATTTCATCCTGACATTAACTGCAGATAGTAGATGGAATTCCTTG-CTCCTTCCGAAAGACGGGAAGTTGC
TCGAAGACCACCAGAGGGAATCAGGACATGAGACCAGCTCTAGGGATTCCTCTGATTGAATCCACGTTGTTGTACAAGCC
GGTAACATCGTTCTGTATTTAAAAAGTAATCCAGATGGAAGCAAGAGTATGTGCTGTCCTCAAACTGTTTCTTGTCGCCG
TAAATCATTGTCACGTTGATTTGTACTGACTATTTTGCACAATGGAAATAAAATTATTACATGGTATTGCTCTTAGCCGT
AATTTATTTCCGCTTCATGTTTCTCTTTGCTGCTGTACCTTTATAGTGAACCTTGCGTACTACTCCCTCCGTCACATAAC
ATAAGGGCGTTTTTGACACTACAGGGGAG-------------ATAGCGTTTTGGCTCTCGGCCTCCATGGAAGCCG----
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>chr1B_904
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-----------------------------------------------------------------ACCTTCTAGAGATGG
GCTGGGTTGTC-----TGAGCCGAACGGATGGGGCAGGTTGGGCTTTCAAAGTTTTGACCGGCCCGATCCACAACCCTGA
-CAGGACGATGAGGCGGACCACGGCGTTGCTGCTGCGCCACGGCGGCGGCGGGATCCCGCAGGCGCTCGCCGACGTGCTC
GTCTGCCCCCTGTCCAAGAAGCCCCTCAGGTAGCCAAGCCAGGCAATATCTGGCCCCTCCTACTTCCACACTACTCCCTT
TGATTGATCTCGTCTCTTTCCTTTCCCCACCAGGTACTGCGAGGCCAGCGGCTCCCTGGTCAGCGACGCCGTCGGCATGT
CCTTCCCGGTGAGTTCCGGTGCCCCCTCCCGCCCCTCTATGCGCCGCGCTTGTTGAATGCTTGGGTCTGCAACCCTCTAG
AGGTTTTAGCCGCTATTC--CATGCTTGCGGCTTACCTGTTTGCTGTATTGCCTCGGCGAACAAGGAAACACATTCATCA
TGTGCAAAGCGAAAAGGGGGCCGATTTCCTAGTATCGCTACTTAATGGCACCATGAAATCCGCAGTACAGACTCAATTCA
GGAAGTAGCTAGTGATAACTAGTCTTCACACAGCACGTCTTTGTGGTTATCGAGAATTTGACTGTTTGAGATGAAGTTTT
AGAACATGAGAGAGGATCATGTTACTAGAAAGTACTCCCTCTGTCCGGAAATACTTGTCATCAAAATGAATAAAAGTAGA
TGTATCTAGATGTATTTTAGTTCTAGATACATCCCCTTTTGTCCATTTTGATGACAAGTATTTTCAGACGGAGGGAGTAC
TACTGGTGTTAGCATGCTGGGATCAGCG--------------TGT-GGGACAGACTCACATACTAGAGAGAGAAGGCGAG
AGGAGAAAATGATTAAAGTGCACA--TATAATGGCTAACAACCAACTGATTTGATGTTCTGAAACAGGGATATTTTATGT
CAACTTTGAACTTTTAGGATAAACATGTTCCTATGGAATTTCAGGATCCCAATTTATTGCTTCCTGTAGCAATTCATCAA
TTTCTTGTGGCATCTCTGGCATACTTACACCACTCCTTGTGAACAGCATCTCTGGCATTTCCACTCATCATTTTTGCTTA
GCAGTTAGCCCTGATTTCATCCTGATATTAACTCCAGATAGTAGATGGAATTCCTTGTCTCCTTCCGAAAGGCGGGAAGT
TGCTCGAGGACCACCAGAGGGAATCAGGACATGAAACCAGCTCTAGGGATTCCTCTGACTGAATCCAAGTTGTTGTAGTA
TTAAAAGATAATCGAGATGGAAGCAAGAGTATGTGCTGTCCTCAAACTGTTTCTTGACGCCGTAAATCATTGCCACGTTG
ATGTGTACTGACTATTTCGTGCAATGGAAATAAAATTATCACATGGTATTGCTCTCACATACTAGAAAGAGAAGGTGAGA
GGAGAAAATGATTAAAGTGCACATATAATGGCTAACAACCAACTGATTTGATGTTCTGAAACGGGGATATTTTACGTCAA
CTTTGAACTTTTAGGATAAACATGTTCCTATGGAATTTCAGGATCTCAATTTATTGCTTCCTGTAGCATTTCATCAATTT
CTTGTGGCATCTCTGGCATACTTACACCACTCATTGTGAACAGCATCTCTGGCATTTCCACTCATCATTTCTGCTTAGCA
GTTAGCCCTGATTTCATCCTGATATTAACTCCAGATAGTAGATGGAATTCCTTGTCTCCTTCCGAAAGACGGCAAGTTGC
TCGAGGACCACCAGAGGGAATCAGGACATGAAACCAGCTCTAGGGATTCCTCTGATTGAATCCACCTTGTTGTACAAGCC
GGCAACATCGTTCTGTATTTAAAAAGTAATCGAGATGGAAGCAAGAGTATGTGCTGTCCTCAAACTGTTTCTTGTCGCCG
TAAATCATTGTCACGTTGATTTGTACTGACTATTTTGTACAATGGAAATAAAATTATTACATGGTATTGTTCTTAGCCGT
AATTTATTTCCGCTTCATGTTTCTCTTTGCTGCTGTACCTGTATAGTGAACCTTGC-TACTACTCCCTCCGTCACATAAT
ATAAGAGTGTTTTTGACACTACAGT-------------------------------------------------------
------------------------------------------TTGTACAAGCAAACAAGGATGTGAGGCGTATGTGTGTA
AAATTTCAGAATGAAATACATTGAAATGCGACCTGTACAAAAAAGACAAATTCATGGTCTTGAAGGATGAATAGTATCAT
GTGTTAAAAAGCCCCAAATTTGTCTTTTTTGCACAATCCTCATTTCAACGTATTTCGTCCTGAAAATTTACACACTTGTG
CACTATGCCTTCATCTATCTCTGTATTTTTTTTTCAGAATTTTTTGAAATAAAATATGAGTTTTCATGAATTTTGAATTT
TGCATTTGGAAGCCTCCATGGAGCTCGGCCTCCAAAAGCAATTTCCGGTCAAAAACGCTCTTATATTATGGGACGAAGGG
AGTAAATCAGAAGAACCCTAGAATCCTGATGTCAAT--------------------------------------------
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>chr4A_2813
TGTACAT-------------------------------------------------------------------------
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-----------------------------------TGTTAGACTATGCTTTGGTGTATTGTTGGACTTGGTGTTACCAGT
CAGAGCTGGTCGTACGCTCCACCCACCTACCACCCTTGCATGGCGCATGCAAGGCTGTTAGCCGCACGCTATCTTCCCCA
TCGATCTAGGATCGATAGATCGATTGTTAGTCTGTTTATACGTGCGTGTGTATCTCTTTCCCTCTCTCTCTCATGTACTC
TATTATATATTACCCCACTGTGGATGCATACGAGTATGTGATGCATTGCAACCC-TAGTCTATCTTCTATCATAGTATCA
GATTAGATCCTTCCGTCGC-------------------------------------------------------------
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------------------------------------------------------TTCCGCCATGGCCACCGCCGCCGCCG
AGGCCGCCGCGGCTACCCCTCTGGCGCCCTCTTCCCAACCTCTGGGATCCA-----------------------------
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-------------------------------------TCCCGCAGCCTCCTCCTCCTCCTCCACCTCCTCCTCCTCTCTC
CCCCGTGGTAAACACGGCTCTCCCTCTCCAAACCGCGCCGACGATTGCCGGCTTCACTTCTGCGGCCTATGTCCACGCGA
TGTGCGTCGAGAGTGCCCACATCAACCTCGGCGTCCGCCTCGATATGAAAGGG---------------------------
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-------------------------------------GCCAACTACTCGACTTGGCGTGGCCTCATGCTCGAGGTCATCG
ACCAGTACGATGTGGCGGCTTGGATCGCGCCAGACTTCACCAACCGCGCCGGCGATGTGGCGTGGAACATCATCAACAAA
GCCGTCAAGCGTTGGTTCTATGGCTCCATGGTCACGGAGCTCGCCGGCTTCATCCTCAACAGAGAAGCCACGGCCGCTGA
GCTGTGGTCCTCCATGGAGTCCTTGTTCGTCAACAACCGGCACTCTCGGCGCTTCCAGCTCACGGCGGAGCTCTTCGCCG
TCAAGCAAGGAGACGCATCGGTCTCCTCCTTCTGCGCGCGCCTCAAGGTCGTTGCAGACGCGCTGAGGAACGCCGGCAAG
GTGTTGAACAATGTTGAACTCGTTGTTCAGCTCCTCCGAGGCATAAACAAGGACCGTCATGAGGTCACGGCGAAAATCAT
CGAGAAATCTCAAACTCTCGTTCCCTTTGATGTTGCAGTTGGCATGCTCCTCCAAGACGAGACTGGCGCTGACTTCTCCC
ACATCGGTATCTCCCACGCCGCACTCGCCATCCAGCAGCGCCCACCTGTCCCTGCTTCCTCCTCCGGCGGGCAAGCCAGG
CCTCCTTGTAAGATTTGGTAGGAATCGTTGAACTCTTTGTCTCGGGTTCGCATCTGGGTCTCCGGTTGGGAGCTCCATGA
TAGGAAAGAGTCCGGCGGGGTCAATCATCCCGTCTTCGGACGATACGATCTGCCGCGGATCTAAGGCCAAGGCAGGTGTG
AGCGTTGACCTCTGGACGGGATCTAATAGCGGATCCGAAGGGCCTTCTTCATGAGGGTAGGGAGCGGCAGCTGAGGCCGC
GAACCCCTGGAAGATCGGATCTCCTGGATATTAGCGGCGTAGTTCAGGTTTCCAAACCTGATCTGGTGACCAGGGGCGTA
ATTGTCGACCTGCTCAAGGTGGCCGGTCGAGTAGGCACGTAGCACGAAGCCGCCGAACACAAAGACTTGTCCAGGGAGAA
AGGTCTCCCAGGATACAACATCATCGTTGATGAAGAGGCAAACCATCGATCCTCATGTTGACAACACAGCAGAGCTCTCA
ATGAAAGCACCAATGTCGGAGTCAAAACTGGCAGATCTCGGGTAGGGGGGCCCAAGCTGTGCATATAAGGATCAATGGTA
ACAATGGACAATGGGACACAATGTTTACCCAGGTTTGGGCCCTTTTAAAGGAGGTAAAACCCTACGTCCTGCTTGATTGT
ATTTGATGAGTATAGGGGTTACAAGAGTTGATCTACCTCGAGATCGTAATGGCTACACCCTAGCTTGTCTAGCCTATGAA
TATTAGGATCGCCTCTATGGACTAAACCCTCCTGTTTATATAGACACCGAAGGGATCTAGGGTTGTACAGAGTCGGTTCA
CAGAGAAAGGAAATAGCATATCCGGACA----------------------------------------------------
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-------------------------------------------------------------------------CCAATCT
TGCCGTTCACGCATACAGGAGTCCTACCCGTACACGAGGATGATCTTCTGCCTCCGTCTTCACAACCCATTAGTACGGCC
CATATCAAAGTTTATTCTTTCCAATGGTTTTTAAAATTGTGAATGGTATACAT---------------------------
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-----------TGTTAGACTATGCTTTGGTCTACTGTTGGACTTGGTATTACCAGTCCGAGCTGGCCGTACGCTCCACCC
ACCTACCGCCCTTGCATGGCGCATGCAAGGCTGTTAGCCGCACGCTATCTTCCCCATCGATCTAGGATCGATTGTTAG--
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>chr5B_2819
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-----------------------------------TGTTAAACTATGCTTTGGTCTACTGTTGAACTTGGTGTTACCGGT
CAGAGCTGGTCGTACGCTCCACGTACCCACCGCCCTTGCATGGCGCATGCAAGGCTGTTAGCCGCACTCTATCTTCCC-A
TCGATCTAG--------GATCGATTGTTAGTCTGTTTA--CGTGCGTGTGTA------------TCTCTCTCATGTACTC
TATTATATATTACCC-ACTGTGGATGAATACGAGTATGTGATGCATTGCAACCCCTAGTCTATCTTCTATCATGGTATCA
GAGTGCTACTTTTGAAATAATGCATTGTGATCTCTGGACAGCTCCCATCTTCAGTGTTTCTGGCAACAAATACTACCTTA
TCATCATCGACGATTACACTAAATACCGGTGGACGTTTCCTCTTGTCCTTAAGTCCGACGTGCATGCTATTTTTTGTTCA
TTTCATGCTCTTGTTCGCACCCATTTTCATCGCACTATCGCCACGTTCCAATGCGACAATGGCCGAGAGTTTGACAACGC
TAGTAATCGTGACTTCTTCCTTCCTTTTGGTACGACCATGCGTTTCTCGTGTCCTTACACGTCTTCGCAAAATGGCACTA
CTGAGCGTGCTATTCGCTCCACTAAAGACATTGTACGGACCCTTCTAATTTAAGTCAACATGCCGCCTAAGTACTGGGTT
GACGCCCTCTCTACTGCCACCCATCTTCTCAATCTTCGGCCAACCAAAATCCTTCTCTGATCTACTCCTCACGAGGCTCT
TTTGTCTCAACCTCCTACGTATGATCACCTTAGGGTTTTTGGATGTCTTTGTTTTCCCAACATGTCCGCCACAGCCGCCC
ACAAGTTGGCACCGCGGTCGACGGCGTATCTCTTTCTTGGATATCCTATGGATCACAAAGGCTAGCGCTGCCTTGATCTC
TCTATACACCGGGTTCATATCTCTAGGCACGTTGTTTTCGATGAGACCGTTTTCCCGTTCGCTAGTCACCCTCCTACGAA
ACCCTCTGTTGCTAATCTTTTTCCTGATCTACCAACCGGTCCAAGTTTCCCAACTAGCCCCCTCCCACCATTTCTTCCTG
GCCCGGTAGCACAACCAGACCGTCCCGCTTCGTCCGCTCGAGCGGCCATCCCATCCTCCCCCATCTCCTCTACGGATGTT
GCCACACCAGCCCCTACGCCTAGCCCTTGCTCCCAGCCTAGTTCATCTAGCAAACCCAACCCAATGTCTTCCGCACCCAG
CCCTGCCTTGGCAAGTCCTGTAGGACCGGCGGCCTCGTCAGCTCCCGCGCCGGCTAGCGCTAGTCCTTCCCAACCTAGCA
CGCCTGCATGACCCCTACCGCCCCATGCAGTCGATGTTCAACCCCCTGCTAACCCGCATCCCATGCGTATGCGTGCTAAA
TCCCGGTTTACCATTCCCTCTCACAAACTTAACTTTCTTGTCGACGCTCCTAACATTCCCCCCCTACCTCGCAGTTACCG
TGCCGCCCTTGCCGACCCTAACTGGGTTGCTGCCATGACTGATGAGTATCAGACACTCCTTCAGAATGACACTTGGACAC
TTGTTCCCCGTCCTGCTGGCTCTCATGTCGTCAGCGGGAAGTGGGTTTTTCGTGTCAAGTATCATTCCGATGGAACCCTT
GCGTGCTACAAAGCACGTTTGGTTATCCGTGGTTTTTCTCAGACTGAGGGGACCGACTACGATGAGACCTTCTCACCAGT
CGTTAAGCCTAGCACCATCCGTGTCGTTCTCACTCTCGCCATCTCAGCCTCTTGGCCCATTCACTAGCTCGATGTCAAGA
ACGCCTTCCTACACGGTCACTTAACCGAGATTGTCTACTATCAGCAGCC-------------------------------
--------------------------------------------------------------------------------
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---------------------------------------TCTCGGGTTCGTGGATCCTACTGCACGTTCACACGTGAGTC
CCCTTTGTAAATCTCTCTACGGTCTTAAGCAGGCCCCGGTGCGCCTAGTTCACTCGCTTCACCGCCTTCCTAGTGACTAT
AGGATTCACTA---------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------CCTCTAGGTGCGACACCTCCTTGTTTATCTACCGTCCTCGATTCACACTGCCTATCTCCTCTTATATGT
CGATGATATCATACTAACTGCATCATCCTCCAGTTTTCTTCAGTATGTCATTACACGCCTTCGACAGGAGTTTGCCATGA
CTGATCTGGGATCTCTCTCGCACTTTCTCGGAGTCTCTGTTACCCGCTCTTCCTCCTCCCTTTTTCTTTCGTAACGGCAA
TATGCGCTCGACATTATCCAGCGTGCCGGCATGTCCGAGTGTCATATTATTCGTACCCCCATCGATTCCGGAGCCAAGCT
TTCCGTTAACAACGGCGACCTTCTTGACGTTGCTGATGCTACCACCTACCACAGTCTCACCGGTGCTTTGAAGTATCTCA
CTATCACACACCCCAATCTATCTTACTCAGTTCAGCAGGCGTGTTTGTTCATGCATGCGCCTCGCACCTCCCACCTTAAC
CTTGTCAAACGCATAGTTCGGTACGTTAAGGGCACTTTAGATTTCGGTATGCACATCACACCTTCCACCTCCACCTCTCT
TGTTGCGTACTCCGATGCCGATTGGGCTGGCTGTCCCGACACTCGTCGTTCCACGTTTGGTTACTGCGTTTACTTTGGGG
ATAATTTGGTTTCGTGGTCATCCAAGCGACAGCTAACTGTTTTCAGGTCCAGTGCGGAGGCTGAGTATCGCACCGTCGCT
CATGCTGTTGCCGAAACTACATGGCTGCGGCAACTTCTGCAGGAGCTTCACCAGCCAGTGTCCAGATCCACTGTTGTCTA
CTGTGACAACGTGTCTGCTGTCTACATGTCTGCTAACCCTGTGCAGCACCGCCGTATGAAGCATATCGAGATTGACATTC
ACTTTGTGCGTGACAAGGTTTCGCTTGGCTAGGTTCGGGTTCTGCATGTTCCCACTTCTTCGCAGTATGCTGACATTTTC
ACCAAAGGGTTGCCAACCACGCTCTTTGCTGAATTTCGATCCAGTCTCAACTCTCAACATCCGGCAAGCCCACGTTGACA
TTGCGGGGGGCTGTTAGACTATGCTTTGGTCTACTGTTGGACTTGGTGTTACCGGTCAGAGCTGGTCGTACGCTCCACGC
ACCCACCGCCCTTGCATGGCGCATGCAAGGATGTTAGCCGCACTCTATCTT-CCCATCAATCTAGGATCGATTGTTAG--
------------------------------------------------------------------------------
>SNPs
-SS-SSSSSSSSSSSSSSSSSSSSSSSSSSSSS-----------------S------------S----------------
-------------------------------------------------------------S------------------
------------------------------S-------------SS-----------------------------S-S--
----SSS-SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS------------------------------------
----------------------------------------------------S-----------S---------------
--------------------------------------------------------------------------------
-------------------------------S---------------------S-------SS-----------------
-----------------------------------------------------------------------SSSSSSSS-
--------------S-S----------------S-S--------------------------------------------
--------------------S-----------------------------------------------------------
-------------S---S---------------S------------------S---------------------------
---------S----------------------------------------------------------------------
------------------------S-------------------------------------------------------
------------------------------------------S-------------------------------S-----
-----------------------------------------------------S--------------------------
------------------------S-------------------------------------------------------
---------------------S-------------------S-----------------------S------------S-
S-----------S---SSSS------------------------------------------------------------
--------------------------------S---------------------------------S-------------
---------------------------------------------S----------------------------------
S--S----------------------------------------------------------------------------
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----------------------------------------S---------------------------------------
------------------------SS----------------------------------S----S-----------S--
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-------------------S---------------------------S--------------------------------
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--------------------------------------S-----------------------------------------
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---------S----------------------------------------------------------------------
----------S--------------------------------S------------------------S-----------
-----------------------S-S-S-SSSSSSSSSSSSS----S-----------------------------SSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS---------S----------S-----------------
--S------S-------S-S----------------------------------------------------S-------
--S----------SS-S-----------------SSS-----------S---------S---------------------
----------------------------S----------------S-------------S--------------------
--------S-S--------------------------------------------S-------------------S----
------------S-------------S----------------S------------------------------------
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--------------------------------------------------------------------------S-----
---------------------------------------S--------------------------------------SS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
>forward_278
--------------------------------------------------------------------------------
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------------------AGTCGTCAATGGAGTGCCTG------------------------------------------
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>reverse_1801
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----------------------------------------CGTGTGGGACAGACTCACAT--------------------
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>forward_1507
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-----------------------------------------------GCACCATGAAATCCGCAGTG-------------
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>reverse_3218
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-----------------GCGTTGAAATGCGACCTGTA-------------------------------------------
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------------------------------------------------------------------------------
