>input_sequence_62307
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------------------------ATGGAGGAG
AGGTGCGCCCTGGCCACGGAGCTGGCGCAGGTGCTCGACACGGTGAGGCAGCTGGAGGCGCACATGGGCGTGAAGGGCGG
CGCTGACGGAGGGGAGACCTGCCGGGCGCTGGTGTCGAGCATGCGCTCCTCCGTCGACAGGTCCATCCACATCGCCATGT
CGTCGTGCTGCGTTGTCCTCGGAGCGCCGGAGTCGCCGCCGTCTGCCGGCGGGAGCCCCCGCAGCGGCGGCTCTGACCAG
GCTGCCGACTCCCCTTGCCGCGGCGCTCATGCAGCTGGGCAGTCCAAGAAGAGGTAATTAAGAGCAAACAAAAGCCTAAA
TCCAAGCTTGTTGATTATGCCGTTTCTTGGTATTAAGATGGTTGCTAGGAGTGCAGGAAAACACAGCCCAAGTGGAGCAC
ACAGGTGAGGGTGAATTCCGTGGAGGACGTCGGCCCCCTCGACGACGGCTTCAGCTGGAGGAAGTATGGTCAGAAGGACA
TCCTCGGTGCCAAGTACCCAAGGTCAGCGACAAGTGACGCTCGAGC-----------ACCTCAAACCAAGCAAGCGAGCT
ATTATTTCAAGAGGACTGACTAAATTGAGCTTCTCGCAGGGCCTACTTCCGGTGCACCCACCGCCACACGCAGGGCTGCT
ACGCCAGCAAGCAGGTGCAACGTGCTCACGGCGACCCGCTGCTCTTCGACGTCGTGTACCATGGGAACCACACGTGCGTG
CAGGGCAAGCACTGCAACAGCCAGACGCCGCAGCCCGCGGCAAGCGGAGAGCACCGGCAGCCGCAGCCTGCCGGCGGACA
GGAGCGGGTCTCCGTGGGACAGAAGACCGACGGC---------GGCGTGGCGGCTCCGTTCTCGTTCCCCTCCAAACAAG
CAGGCGCCGACACGGGCAGCGACTTCCAGGCCGGCTGTGCCACCACTGCATCCCCCTTCATGTCGCCGGCGACGTCAGAG
TGCAAGGCCTCCACGACGGAATCCCCGATGGGGGACATGGACTTCATGCTCCAGCTGGCCGACGCCGATTTCTTGGACAA
CTCGCGCTATCTCTAA----------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------
>chr3D_1_TraesCS3D01G238300
CCTTTGGAATAGGGAGAGACGGGCTGGGAAATACACTTTGGTCCTGGTTGGAGATACACCCTACACGAGGGGAAAATTTA
ATAATTAAACAAAAAGACAAAATAGTTCAATTTTTTTAAGAATAAACCTGACTTTCTTGTACACTAGTGTCTAAATTTTC
ATGAAAATAAACCAATGTTGACTTCAGGGCAAAAAGGAAAAAAATATTTACTATTAGAGGTCACTATTCACACTATTTTG
TTCAAAAAATTTATTCTTTTTGTAAAGAAGACAAGAGGGAATTTTTCTA--TGGATTTTTTCTCACAAGTACAATGGAAG
GTCAATTTTATTTCAAAAATGTTTCAA---TTTTTTTACTTTTTGTGTAATTATCATTTTTTTCATATAGGGTGTAGATA
CATCCAGGAACCAAACATCCGCGTCC--------------------CTGTGGGATGTGCGCAGGGATCAACATCGCGCT-
GAAAGTCCTGGAGCGAACGTTCGCCCAATACAATTTACGTTAAAATAACCTTTCTCTTCATTGTAAGCAATCAAAGTGTA
AGCTGCATGGACCAACCAGCACGGCATACAACTGACCGACCACTAACACCAAAAGAGAAATACTTCCAGCCGATCTGCAG
ATGATCGATCAAAGAAGCGGTCAAAGGATGTTCTAGATGAAACAAGTAAGCAGCACTCAGCATCGCTAGTGCCCAGCCCC
AGGACCAAAGACCGGTCTAAGCATTTGAATATTACACA--CACAAGTCTTTTCCTTCCGCGGGAGAATCTGTTAGTCCAG
TCAAACTTCTTACTCTTCCAACCGGGACAACGAGCGCGATCCAGTGACGCTGCAGCGCGATCTTTGCCTCCCCGGCCGGC
CA---CCAGCTCTATAAAAGGGTCTCCCATTCGCCCGCACTGGCACACACCGAACCATCACGACCGCCCACACACGCCTG
CTGTGTCGTATGAACGCCGGCACTCTGACCGCTGACGGCTGAGCGAGTGGGAGGGACGAGGTGTGCAGCTGATGGAGGAG
AGGTGCGCCCTGGCCACGGAGCTGGCGCAGGTGCTCGACACGGTGAGGCAGCTGGAGGCGCACATGGGCGTGAAGGGCGG
CGCTGACGGAGGGGAGACCTGCCGGGCGCTGGTGTCGAGCATGCGCTCCTCCGTCGACAGGTCCATCCACATCGCCATGT
CGTCGTGCTGCGTTGTCCTCGGAGCGCCGGAGTCGCCGCCGTCTGCCGGCGGGAGCCCCCGCAGCGGCGGCTCTGACCAG
GCTGCCGACTCCCCTTGCCGCGGCGCTCATGCAGCTGGGCAGTCCAAGAAGAGGTAATTAAGAGCAAACAAAAGCCTAAA
TCCAAGCTTGTTGATTATGCCGTTTCTTGGTATTAAGATGGTTGCTAGGAGTGCAGGAAAACACAGCCCAAGTGGAGCAC
ACAGGTGAGGGTGAATTCCGTGGAGGACGTCGGCCCCCTCGACGACGGCTTCAGCTGGAGGAAGTATGGTCAGAAGGACA
TCCTCGGTGCCAAGTACCCAAGGTCAGCGACAAGTGACGCTCGAGC-----------ACCTCAAACCAAGCAAGCGAGCT
ATTATTTCAAGAGGACTGACTAAATTGAGCTTCTCGCAGGGCCTACTTCCGGTGCACCCACCGCCACACGCAGGGCTGCT
ACGCCAGCAAGCAGGTGCAACGTGCTCACGGCGACCCGCTGCTCTTCGACGTCGTGTACCATGGGAACCACACGTGCGTG
CAGGGCAAGCACTGCAACAGCCAGACGCCGCAGCCCGCGGCAAGCGGAGAGCACCGGCAGCCGCAGCCTGCCGGCGGACA
GGAGCGGGTCTCCGTGGGACAGAAGACCGACGGC---------GGCGTGGCGGCTCCGTTCTCGTTCCCCTCCAAACAAG
CAGGCGCCGACACGGGCAGCGACTTCCAGGCCGGCTGTGCCACCACTGCATCCCCCTTCATGTCGCCGGCGACGTCAGAG
TGCAAGGCCTCCACGACGGAATCCCCGATGGGGGACATGGACTTCATGCTCCAGCTGGCCGACGCCGATTTCTTGGACAA
CTCGCGCTATCTCTAAGTCTCCGCAGGACTAC---TAGGCAACGAATTATGAGTTCAGGATGCTAGCTTCGAGCTTGTAA
GATTTTAAGCTGATGAATGCACATGCCACTTGTTCGAGCTTTACACTGCATGCCGCTTGTTCTGAATCC-----------
-ATTAAGTGACGAGCAGATGAGTCCTCA-TGGATCTGAATTCTGAAAGCTACG---------------------------
---------------------------------------------------------TTCGTGGACCAAGGTCGTACCAG
ATGCCAGGCCCAGGATTA--------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------TCATGAAAAATATCACTTGCCGTCACCAGCAGGTT--------
ACTGACTAGCCACGACAAAACGAAACAGCAAAACAACGATAAAGACTGAATGACGCCGCGAGAGGCAGTCAAGTCTGACG
ATGACAGACATGTATAGATGATAATGTTAAGGTTGCGTTTGGATGTCACTAGTCGGGGTCTTCGGGGTCGGAATCGTGAA
TTGGTATTCCCATCGTCTGTCTGGTGCCTTAG---------GCAAATCCCTTAGGCCGCGCTTGGATGCGGTGTATTCTA
ATACAGATGTATTTATTCTACACATCGGTCATGAACAAATTTCCAGCCGGAAACAAAACGACGAGCAGAGACCTGTATTT
TTTACAAGGGTATTTGAGACAGAAACGGTAACACTTG-----------------GGCGCACCACAAAAGTTGCAACAAAT
TTTGCTCATGGCAGCCAAGGTCCTCGGTGGTACATCAAGAGCCATTATCGCATGAAGTGGAATCGCGCAT-AGAACAGTT
TGGACCACGAGCAATCTACTACTCTTAGAAAGGGAGGCACCCCTCCAAGCTGGAAGTTTGTTGGCTAATTGTTCGACCAG
ATATTGGTATTAGGTCACCGAATGCTTCCGCGGGCTTACGTGGAGGCCCAAATACTTGCATGAAAAGGATCCTAGTGCAC
ACTCAAGTATGTCGCTGATTTGTTCCCCCG-CTCATCAAAGCACCTGATCAGCATGGCCGACGTATTTAAGAAGTTTACG
TGAAATCCAAACGCCATCGCGAAAGTCTCCATAATTGCCGTACAAGTCCTC
>chr3B_7
------GAATAGGGAGAGACAGGCTGGGAAATACACTTTGGTCCTGGTTGTAGATACACCCTGGTTGGT-GGGAAATTTA
ATAATTAAACAAAAAGTCAAAATAGTTCAAAAAAAT--AGAATAAACTTGACTTTCTTTTACACCAGTGTATAAATTTTC
ACG-AAAAAAACCAATGTTGACTTCAGGGCAAAAAGGAATTATTTTTTTGCTATTAGAGGTCATTATTCACACTATTTTG
GCC-AAAAATTTATTATTTTTGTAAAGAAAACAAGAGGGATTTTATTTTTGTGGATTTTTTCTCACAAGTACAATTGAAA
GTCAAGTTTATTTCAAAAATATTTTCAGATTTCTTTTACTTTTTGTGTAATTACTATTTTTTTCATATAGGGTGTAGATA
CGCCCAGGAACCAAATGTCCGCGTCCGTGACGAGCTGGCGAACTCACTGTGGGATGCGCGCAGGGATCAACATGGCGCGG
GAAAGTCCTGGAGTCCTG------------------------------CCTTTCTCTTCATTGTAAGCAGTCAAAGTGTA
AGCTGCATGGACCAACCAGCATGGCATATAACTGAGCGGGCACTAACACCAAAAGAGAAATATTTCCAGCCGATCTGCAG
ATGATCGATCAAAGAAGCGGTCAAAGGATGTTCTAGATGAAACAAGTAAGCAGCACTCAGCATCGCTAGTGCCCAACCCC
ATGACCAAAGACCGGTCTAAGCATTTGAATATTACACG--CACAAGTCCTTTCCTTCCGCAGGAGAATCTGTTAGTCCAG
TCAAACTTCTTACTCTTCCAACCGGGACAACGAGCGCGATCTAGTGACGCTGCAGTGCGATCTTTGCCTCCCCGGCCGGC
CACCACCAGCTCTATAAATGGGTCTCCCATTCGCCCGCACTGGCACACACCCAACCATCACGACCGCCCATAGACGCCTG
CTGTGTCGTATGAACGCCGGCACGCTGACCGCTGTCGGCTGAGCGAGCGGGAGGA---------------GATGGAGGAG
AGGTGCGCCCTGGCCACGGAGCTGGCGCAGGTGCTCGACACGGTGAGGCAGCTGGAGGCGCACATGGGCGTGAAGGGCGG
CGCTGACGGAGGGGAGACGTGCCGGACGCTAGTGTCGAGCATGCGCTCCTCCGTCGACAGGTCCATCCACATCGCCATGT
CGTCGTGCTGCGTGGTCCTCGGAGCGCCGGAGTCGCCGCCGTCTGCCGGCGGGAGCCCCCGCAGCGGCGGCTCTGACCAG
GCTGCCGACTCCCCTTGCCGCGGCGCTCATGCAGCTGGGCAGTCCAAGAAGAGGTAATTAAGAGCAAACAACAGCCTAAA
TCCAAGCTTGCTGATTATCCCGTTTCTTGGTATTAAGATGGTTGCTAGGAGTGCAGGAAAACACAGCCCAAGTGGAGCAC
GCAGGTGAGGGTGAACTCCGTGGAGGACGTCGGCCCCCTCGACGACGGCATCAGCTGGAGGAAGTACGGTCAGAAGGACA
TCCTCGGAGCCAAGTACCCAAGGTCAGCGACGATTGACGCTCGAGCGCTACTCAACCACCTCAAAGCAAGCGAGCAAGCT
ATCATTTGAATAAGA---ACTAAATTGAACTCGTCGCAGGGCCTACTTCCGGTGCACCCACCGGCACACGCAGGGCTGCT
ACGCCAGCAAGCAGGTGCAACGTGCTCACGGCGACCCGCTGCTCTTCGACGTCGTGTACCACGGGAACCACACGTGCGCG
CAGGGCAAGCACTACAACAGCCAGAGGCCACAGCCCGTAGCAAGCGGAGAGCACCGGCAGCCGCAGCCGGCAGGCGGACA
GGAGCGGATCTCCGTGGGACTGAAGACCCAGGGCTGCGCGCCGGGCGTGGCGGCTCCGTTCTCGTTCCCCTCCAAACAAG
CAGGCGCCGACACGGGCAGCGACTTCCAGGCCGGCTGTGCCACCACTGCAGCCCCTTTCATGTCGCCGGCGACGTCAGAG
TGCAAGGCCTCCACGACGGAATCCCCGATGGGGGACATGGAGTTCATGCTCCAGCTGGCCGACGCCGATTTCCTCGATAA
CTCGCGCTATCTCTAAATCTCCGCAGGACTGTTTATAGGCAACGAATTATGAGTTCAGGATGCTAGCTTCGAGCTTGTAA
GATTTTAAGCTGATGAATGCACATGCCACTTGTTCGAGATTTACACTGCATGCCGCTTGTTCAGAGTCCTGACGGATCTG
AACTAAGCGATGACCAGATGAGTCATCATTGGATCTGAATTCCGAAAGCTACTCCCTCCGTTTTAAAATAAATGACTCAA
CTTTGTACTAACTTTTTAATACAAAGTTGGGTCATCTATTTTGAAACGGAGAGTACATTCGTGGACCAAGGTCGTACCAG
ATGCCAGGATTATCAGGGCATGCCCAACGGTTAGCCCCAGAGGTGATGCCCCGCAGGCCAACTAGGCTCGGATGCCAGCG
TGGCGTTAAAGTGGTAGCTTGCAGAGCACAGGAGGATTCTGCAGAGGAGACTGCTTCTTCAAACCAAAAAGCAAGAAAAG
CTAAGAAAAGGAGAGAGAAGATCAGGACTGCCAATGGGATAGGTTGGAGAGAGAGTGTATGTGTGGACCCCAAACGAGAT
GGTGTCCTCACGTCAGTGCATTGGGTGATTAAAAATCAAACCAGATGCCTCAATTATTTTTACCTACGTGTAGGGCTGGG
GCAGCAGCAAGGTGCTGCCCCCGTTGTACATGCCCTCAGGGCATGTAAAATGCATAGCCTTAAGGTGATGCCTCGCATAC
CATATAGGATCGGATATGACGTAAAGTAGGTTCGGATAGGAAAGCAGGATCATCTCCAGGAGGCGGGTTCTTGAAGAGAA
AAAGCATGGTCCGATGACAAAAGCTGAAAAGGTTGGAGTAAAGTAAAAATGCATGTGTACTAGAGTCTTTATTTTTTATT
TTTTTAAGGAAGCCCACTAGTGATAGCTTGCATTGGAGAGAAAAAATTAATGTAGATGCTTCAAATTACTTTTTGTCATG
GGGCATATGTATCCATATGCCATCATTGTACATGCCCTCATGAAAAATATCACTTGCCGTCACCTGCAGGTT--------
ACTGACTAGCCACGACAAAACGAAACAGCAAAACAACGATAAAGACTGAATGACGCCGCGAGAGGCAGTCAAGTCTGACG
ATGACAGACATGTATAGATGATAATGTTAAGGTTGCGTTTGGATGTCACTAGTCGGGGTCTTCTGGGTCGGAATCGTGAA
TTGGTATTCCCATCGTCTGTCTGGTACTCAGGGCATCTCTAGCAAATTTCTTAAGCCGCGCTTGAATGCGGTGTATTTTA
ATCAGA--------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------
>chr3A_496
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------AAAAAAACATTTCTCTCATTGGTAAGCAGTCAAAGTGTA
CGCTCCATGCACCCACCAGCACGGCATATAAGAGACGGAGCACTAACACCAAAAGAGAAATATTTCCAGCCGATCTGCAC
ACGATCGATCAAAGAAGCGGTCAAAGGATGTTCTAGATGAAAC----AAGTAGCACTCAGCATCGCTA------------
--GACCAAAGACCGGTCTAAGCATTTGAATATTACACACACACAAGTCCTTTCCTTCCGCAGGAGAATCTGTTAGTCCAG
TCAAACTTCTTACTCTTCCAACCGGGACAACGAGCCCTAGCCAGTGACGCCGCAGTGCGATCTTTGCCTCTCCGGCCGGC
CA---CCAGCTCTATAAAAGGGTCTCCCATTCCCCCGCACTGGCACACACCGAACCATCACGACCGCCCACAGACGCCGG
CTGTGTCGTATGAACGCCGGCACGCTGACCGCTGACGGCTGAGCGAGCGGGAGGA---------------GATGGAGGAG
AGGTGCGCCCTGGCCACGGAGCTGGCGCAGGTGCTCGACACGGTGAGGCAGCTGGAGGCGCACATGGGCGTGAAGGGCGG
CGCTGACAGAGGGGAGACCTGCCGGGCGCTGGTGTCGAGCATGCGCTCCTCCGTCGACAGGTCCATCCACATCGCCATGT
CGTCGTGCTGCGTGGTCCTCGGAGCGCCGGAGTCGCCGCCGTCTGCAGGAGGCAGCCCCCGCAGCGGCGGCTCTGACCAG
GCTGCCGACTCCCCTTGCCGCGGCGCTCATGCAGCTGGGCAGTCCAAGAAGAGGTAATTAAGAGCAAACAAAAGCCTAAA
TCCAAGCTTGTTGATTATCCCGTTTCTTGGTATTAAGATGGTTGCTAGGAGTGCAGGAAAACACAGCCCAAGTGGAGCAC
GCAGGTGAGGGTGAACTCCGTAGAGGACGTCGGCCCCCTCGACGACGGCTTCAGCTGGAGGAAGTACGGTCAGAAGGACA
TCCTCGGCGCCAAGTACCCAAGGTCAGCGACGACG---------------CTCGAGCACCTCAGACCAAGCGAGCGAGCT
ATCATTTCAAGAGGACTGACTAAATTGAGCTTCTTGCAGGGCCTACTTCCGGTGCACCCACCGGCACACGCAGGGCTGCT
ACGCCAGCAAGCAGGTGCAGCGTGCTCACGGCGACCCGCTGCTCTTCGACGTCGTGTACCACGGGAACCACACGTGCGCG
CAGGGCAAGCACAGCAACAGCCAGAGGCCGCAGCCCGCAGCAAGCGGAGAGCACCGGCAGCCGCAGCCTGCAGGCGGACA
GGAACGGATCTCCGTTGGACAGGAGACCGAGGGC---------GGCGTGGCGCCTGCGTTCTCGTTCCCCTCCAAACAAG
CAGGCGCCGACACGGGCAGCGACTTCCAGGCCGGCTGTGCCACCACTGCATCCCCCTTCATGTCGCCGGCGACGTCAGAG
TGCAAGGCCTCCACGACGGAATCCCCGATGGGGGACATGGACTTCATGCTCCAGCTGGCCGACGCCGATTTCTTGGACAA
CTCGCGCTATCTCTAAGTCTCCGCAGGACTAC---TAGGCAACGAATTATGAGTTCAGGATGCTAGCTCCGAGCTTGTAA
GATTCTAAGCTGATGAATGCACATGCCACTTGTTCGAGCTTTACACTGCATGCCGCTTGTTCTGAGTCCTGATGGATCTG
AATTAAGTGACGACCAGATGAGTCCTCA-TGGATCTGAATTCTGAAACCTACG---------------------------
---------------------------------------------------------TTCGTGGACCAAGGTCGTACCAG
ATGCCAGGCCCAGGATTA--------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------TCATGAAAAATATCACTTGCCGTCACCAGCAGGTCACTGAGAC
ACTGACTAGCCACGACAAAACGAAACAGCAAAACAACAATAAAGACTGAATGATGCCGCGAGAGGCAGTCAAGTCTGACG
ATGACAGACAT----AGATGATAATGTTAAGGTTGCATTTGGATGTCATTAGTCG---------GGGTCAGAATCGTGAA
TTGTTATTCCCATCGTCTCTTTGGGTGACTT-------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------
>chr3B_2557
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------ATCGGTCATGAGCAGACTTCCAACCGGAAACAAAACGACGAGCAGAGACCTGTATTT
CTTACAAGGGTATTTGAGACAGAAACGGTAAATCCAAATACGGTCTTAAAACTTGGCGCACCACAAAATTTGCAACAAAT
TTTGCTCATGGCAGCCAAGGTCCTCGGTGGTGCATCAAGAACCATCATCTCGTGAAGTGGAATCGCGCAAGAGAACTGTT
TGAACCACGAGCAATCTACTACTCTTAGGAAGGGAGGCACCCCTACAAGCTGGAAGTTTGTTGGCTAATTGTTCAACCAG
ATATTGGTATTAGGTCACCGAATGCTTCCGCGGGCTTAGGTGGAGGCCCAAATATTTGCATGGAAAGGATCCTAGCGCAC
ACTCAAGTATGTCGCTGATTTGTTGCCCCTCCTCGTCAAAGCACCTGATCAACATGGCCGACGTATTTAAGAAGTTTACG
TGAAATCCAAACGTCATCGCGAGAGTCTCCAGAATTGCCGCACAAGTCCTC
>SNPs
SSSSSS--------------S-----------------------------S-----------SSSS-SSS--S-------
----------------S-------------SSSSS-SS---------S----------S-----S-----S---------
-S-S---S-------------------------------SS-SS-S---S-------------S----------------
SS-S-----------S-------------S----------S---S-S-S--------------------------S---S
-----S--------------S---SS------S--------------------SS-------------------------
-SS------------SS---------------------------------------S----------------S----S-
-------------SSSSSSSSSSSSSSSSSSSSSSSSSSSS----S-----------------------S----------
----------------------------S----------S----------------------S-----------------
---------------------------------------------------------------------------S----
-S----------------------------------------------S-----------S-------------------
-------------------------------------------------------S------------------------
------------------------------------------------------------------------S-------
-----------------------S-----------------------S------SSSSSSSSSSSSSSSS----------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------S------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------S-------------------------------------------------------------
S--------------S--------------------------------------------------S-------------
-------S-----------------------S-S-------------------------------------S--------
--S------------------------------------------------------------S----------------
-------------------------------------------------------------S----------------S-
-------------------------S------------S--------------------------------S--------
-------S----------------------S-------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------------------S--------------
-------------S------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------------------S----------------
-------------------------S-SS-S----------------SS----S----------S------------S--
--SSSSSSSSSSSSSSSSSSSSS-----------S--S-S-----S----------------------------------
S------------------------------SS-SSS-------------------------------S-----------
-------------------------------S--------S----S---S-S-----------------S------S---
--S-------------------------S---------------S-----------------------------S-----
--------------------------------------S---------------S-------S------------S----
------------------------S----S----S----------------S----------------------------
-------------S--------S--------S--------S----------
>forward_501
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-AAAGTCCTGGAGCGAACGTT-----------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------
>reverse_1848
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------GTCTCCGTGGGACAGAAGAC-----------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------
>forward_502
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--AAGTCCTGGAGCGAACGTTC----------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------
>reverse_3264
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------------------GGGGTCGGAATCGTGAA
TTG-----------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------
