>input_sequence_62137
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----------------------------------------AAGATAAACCAAAAGTTGAGAACCTACAGGCTACAGGCTA
CAGCATTGCGCAATTAGCCTCA--------CACGAGCAAGTCCCTCCCGGTAGTAGTACCGTACCACACGCGCACACTCC
CGAAGGACAAGAGCAGAAAGAATGTTGAGCCCCGGCATTTCGGTCAAGAAGCGCCACGGCGGTGCCGGGTTTGCGCTCGG
GTGTGGCTGCAAGGACGCCAAGAGCGTGTCGGTGATC------------TCTGCGTCGCCCTCGCCGTCCGGCGCGGGTA
CACCGACCACAACCGAGACGCGGCGCAGGGGCGGGAGGGCCAACCCGTCGGCGTCGACGACGACGGACACTCTGACCTCT
GCCTCGTCGTCGTCCCTGCTATGGGAGGACGCCGTGGCGGAGTTCGAGTGCGGCGACGACGGCCAGTTCAAGATGGAGAG
CTCCGCAGCCACGCAGAGCTTCTCCGGCCTGCTGCGCGAGCTCAACGAGCTGGAGCAGAGCGTCGTGTCGTGGGGCCGGA
AGAGCCACCGCAGCCGCGACGACAAGAAAGCCTCGTCGCCGCCACTGGAGCACAAGCAGGCGACCATGAAAA--------
----GCGGCGTCAAGGGCGGCGACGTCACGACGGGCGGCGCTAAAGATCGCCATGTCGGTGACAGCGTCGAACCGGG---
GACTGTTGGTGCTTGCGTCGAAGTGGGGCTCGACGGCAGCGTGGCGGTGGTGAAGCAGTCCGAGGACCCGCTGAGCGACT
TCCGGCAGTCGATGGTGCAGATGATCGTGGAGAACGGGATCATCGCCGGGGAGGAGCTGCGGCAGATGCTCCGCCGCTTC
CTCACCCTCAACGCGCCGCACCACCACGACGTCATCCTCCGCGCCTTCGCGGAGATCTGGGACGCTGTGTTCTCGGCCTC
CTACGTGCCCGCCCCCGCCGCCGCCCCGCCCCGCAAGTACACCCGCCGCGAGGAGCCCGCCGCTGGAAGGCCGCCCATGC
CTCCGAGGACCCCTCCGCGCCACCACCACTCGCCATCACCGTCAGCATGGCGCGTGTAAACGCTCCGAAGTGTGCTTCCT
CGATTCAA------------------------------------------------------------------------
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>chr6D_1_TraesCS6D01G239400
ACCCCGCAGCTTCCTCCCCCGCCGATGGTCTGACCCACCTCGCCATAGTTGCCGCCTCCGCGACCAATTTCCCCAATCCA
TCCTCCGCCTCCATGCCTCCGTCGCCTCGATTCGGCACCCCCGCTGCTCCTCCGACGCTCCTCGACCGCCCCTACACCTC
TCCTCCTCCTCCCCTCTTCGCCTTAAATTGCCGCTCCTTCGCTGTTGCATCGCCACCCCGATTCGCCATCCCCGACGTTC
CTTCGCCGCCCCTACGCTGCTCCTCCTCCTCTCTCCACCTCAAATGGCCACTCCTATGCCGCTGCACCACCGTTCCGATT
CACCACCCCCGCTGCCCCTCCGCCGCTCCCCCGCCACCCCACGCACAGTCGCCGCCGTCCCGCCGTCCCCATTGCCGCCT
CCCCGATTCGGCCGCCGTCCCCTAATTTTTACATCTCCATTTTGCATCATCTATTTGAGTTGCAGTTTTACATCTTCAAT
ATGCATCATCTGTTGGAGTTGTTTTTTCTAAGATGTAAAAAACACTTTTTGAAGATGTTAATTCTTCAAATTTGCATCTT
CTATTGGAGATGCACTTATAGAACGGAGGGAGTAGCAAACACATCTTATTTATCCATATTTGCATAAGGTGGAACTCAAA
GTTTTACTATTTCTTAGCATGTCGCATCTCACTGAACGAACATCACTGAAAAATCTGAATTAAATTTAGAAAAATGCAAG
CGTCAATGACAATTCTAAGACTTGAACTCTAACGGACTGGTTCCACCACAATAAAGAGTAGTATAGTCATGCTCAGATGC
TATTACTTGTATCGCTTGATGCGACGTTACAGTTAATAAAGCGCATTTTATCCTTTTTGTCAAAAAAAAGCGCATCTTTA
TCTGGAAACGAAAGTGGGTCGTGCGCGCCCATGTGTACACGGCAGGGGGCTTAGCTGCCTAGCTGAGCGATGCACATCGC
ACACTTCTTCTATATAAAGCCCAAAAATGCCCGACCCAGCAAGATAAACCAAAAGTTGAGAACCTACAGGCTACAGGCTA
CAGCATTGCGCAATTAGCCTCA--------CACGAGCAAGTCCCTCCCGGTAGTAGTACCGTACCACACGCGCACACTCC
CGAAGGACAAGAGCAGAAAGAATGTTGAGCCCCGGCATTTCGGTCAAGAAGCGCCACGGCGGTGCCGGGTTTGCGCTCGG
GTGTGGCTGCAAGGACGCCAAGAGCGTGTCGGTGATC------------TCTGCGTCGCCCTCGCCGTCCGGCGCGGGTA
CACCGACCACAACCGAGACGCGGCGCAGGGGCGGGAGGGCCAACCCGTCGGCGTCGACGACGACGGACACTCTGACCTCT
GCCTCGTCGTCGTCCCTGCTATGGGAGGACGCCGTGGCGGAGTTCGAGTGCGGCGACGACGGCCAGTTCAAGATGGAGAG
CTCCGCAGCCACGCAGAGCTTCTCCGGCCTGCTGCGCGAGCTCAACGAGCTGGAGCAGAGCGTCGTGTCGTGGGGCCGGA
AGAGCCACCGCAGCCGCGACGACAAGAAAGCCTCGTCGCCGCCACTGGAGCACAAGCAGGCGACCATGAAAA--------
----GCGGCGTCAAGGGCGGCGACGTCACGACGGGCGGCGCTAAAGATCGCCATGTCGGTGACAGCGTCGAACCGGG---
GACTGTTGGTGCTTGCGTCGAAGTGGGGCTCGACGGCAGCGTGGCGGTGGTGAAGCAGTCCGAGGACCCGCTGAGCGACT
TCCGGCAGTCGATGGTGCAGATGATCGTGGAGAACGGGATCATCGCCGGGGAGGAGCTGCGGCAGATGCTCCGCCGCTTC
CTCACCCTCAACGCGCCGCACCACCACGACGTCATCCTCCGCGCCTTCGCGGAGATCTGGGACGCTGTGTTCTCGGCCTC
CTACGTGCCCGCCCCCGCCGCCGCCCCGCCCCGCAAGTACACCCGCCGCGAGGAGCCCGCCGCTGGAAGGCCGCCCATGC
CTCCGAGGACCCCTCCGCGCCACCACCACTCGCCATCACCGTCAGCATGGCGCGTGTAAACGCTCCGAAGTGTGCTTCCT
CGATTCAACATACTATG---------TCATTTCATTTAATTTCCGGTTAATTAGCATTGGAGATTTGGAATCGCCACTAG
CTTATTATTGTACGTAATACGTGAGTGGGCCCGTATAACAGAGTTCTTTGTGTTATTCCGTAGAGTATATTTTGTCTCCG
TTCTTCTCACGTGCAATGCAACTGCGTTTGCTACAAAGCCAGCGCGGATTCCCGCCTACGACAAGCCCGAGCACGTAGGC
GTGCCGGCGTGTACGTTCCAGACTAGCAGAAGATAGATCGGGCGTGCGTTGCTTCGGTTAGGAGTTGGAGCGGTGGGGAC
TGGAGACGAACGCCATGCATGCATGGGCGACAGCCAGTTGTGGTTGGATGGGAACGGGAGAGGGAGTACGTAGGGTCCGT
CTCCCTCGCATGCGCGGCCGCCCGTGCATTGCGGCCGGGGCAACCTGGACTGCATGGTCCATACGGCAACTTAAATTGTC
CCGTGCCCTTTCTCC--TAGCTAGCTAGCACTGGATTATTCC-----------TTGTGAAATTCCTTGCCGTGCATGCAT
GGCTCCCTGCTCCTAGCAATCACTAGTAAGAAAAGGGGCTTTTACCCCGGTTCATAAGGGCCTTTAGTCCCGGTTCTGGA
ACCGGGACTAAAGGGTCGTTACTAATGCCCTAGCCCTTTAGTCTCGGTTCTTACACGAACCGGGACTAAAGGCCGTCCAC
GTGGCCGGTGCGGGGAGCCCAGGCAGGAGGGCCTTTGGTCCCGATTGGTGCCACCAACCGGGACCAATAGGCATCCACGC
GTCAGCACCTGGCAGGAGCTGAGATTTTTGTTTTTTTAAAGAGGGTGGTTTAGGGGTTTTGGGGGGTTAATTTAGGTGTT
TCATATATTGTGTTAGCTAGCTAATTAATAGAGAGAAGTGTCCTCTCTTATCTTCGTGCTTGGTCGACGCTACGTACTAT
ATACGTATGGAGAGGAGTAGACACGCTAGCTAGTAATCAAATGAAGGAAACAGAAGATCGTCATGAACAT
>chr6A_864
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---------------------------------------------------------------AATAAAGCGCCTCTTTA
TCTAGAAACGAAAGTGGATCGTTCGCGTCCATGCGTACAGTGC-GGGGGC-TAGCTGCCTAGCTGAGCGATGCACACTT-
---CTTCTATATATAAA---------GC-CCCGACCCAGCAAGATAAACCAAAAGTCGAGAACCTAGAGCGC--------
------TGCGCAATTAGCCTCAGTGCCTCACACGAGCAAGTCCCTCCGGGTAGTAGCACCGTACCACACGCGCGCACTCC
TGAAGGACAAGAGCAGAAAGAATGTTGAGCCCCGGCATCTCGGTCAGGAAGCCCCACGGCGGCGCCGGGTTCGCGCTCGG
GTGTGGCTGCAAGGACGCCAAGAGCGTGTCGGTGGTC------------TCTGCGTCGCCCTCGCCGTCCGGCGCGGGTA
CATCGACCACAACCGAGACTCGGCGCAGGGGCGGGAGGGCCAACCCGTCGGCGTCGACGACGACGGACACTCTGACCTCT
GCCTCCTCCTCGTCCTTGCTATGGGAGGACGCCGTGGCGGAGTTCGACTGCGGCGACGACGGCCACTTCAAGAGGGAGAG
CTCCGCAGCCACGCAGAGCTTCTCCGGCCTGCTGCGCGAGCTCAACGAGCTTGAGCAGAGCGTCGTGTCGTGGGGCCGGA
AGAGCCACCGCAGCCG---CGACAAGAAAGCCTCGACGCCGCCACTGGAGCACAAGCAGGCGACCATGAAAA--------
----GCGG------------CGACCTGAAGACGGGCGGCGCTAAAGATCGCCGCGCCGGTGACAGCGTCGAACCGGGGAC
GACTGTTGAGGCCTGCGTGGAAGTGGGGCTCGACGGCAGCGTGGCGGTGGTGAAGCAGTCCGAGGACCCGCTGAGCGACT
TCCGGCAGTCGATGGTGCAGATGATCGTGGAGAACGGGATCATCGCCGGGGAGGAGCTGCGGCAGATGCTCCGCCGCTTC
CTCACCCTCAACGCGCCGCACCACCACGACGTCATCCTCCGCGCCTTCGCGGAGATCTGGGACGCCGTGTTCGCGGCCTC
CTACGTGCCCGCCCCCGCCACCGCCCCGCCCCACAAGCACACCCGCCGCGAGGAGCCCGCCGCCGGAAGGCCGCCCATGC
CTCCGAGGACCCCTCCGCGCCACCACCACTCGCCATCACCGTCAGCATGGCGCGTGTAAACGCTCCGAAGTGTGCTTCCT
CGATTCAACATACTATG---------TCATTTTATTTAATTTCCGGTTAATTAGCATTGGAAATTTGGAACTGCCACTAG
CTTATTATTGTACGTACTGCGTGAGTGAGCCCGTATAACAGAGTTCTTTGTGTTATTCCGTGGAGTATATTTTGTCTCCG
TTCTTCTCACGTGCAATGCAACTGCGTTTGCTACAAAGCCAGCGCGGATTCCCGCCTACGACAAGCCCGAGCACGTAGGC
GTGTACGTT----CCAGACTACCA----GAAGATAGATCGGGCGTGCGTTGCTTCGGTTAGGAGTTGGACCGATGGGGAC
TGGAGACGAACGCCATGCATGCATGCGCGACAGCCAGTTGTGGTTGGACGGGAACGTGAGAGAGAGTACGTAGGGTCCGT
CTGGCTCGCATGCGCGCCCGCCCGTGCATTGCGGCCGGGGCAACCTGGACTGCATGGTCCATACGGCAACTTAAATTGTC
CGGTGCCCTTTCTACAGTAGCTAGCTAGCACGGGCACGGGATCATTCCCGACTTTGTGAAATTCCTTCCCGTGCATGCAT
GGC-----------------------------------------------------------------------------
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>chr6B_885
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----GAAACGAAAGTGGGTCGTGTGCGCCCATGTGTACAGGGCAGGGGGC-TAGCTGCCTAGCTGAGCGATGCACACTT-
---CTTCTTCTATATAAAGCCCCGAGGC-CCCGACCCAGCAAGATAAACCAAAAGTGGACAACCTAGAGCGC--------
------TGCGCAATTAGCCTCA--------CACGAGCAAGTCCCTCCGGGTGGTAGTGCCGTCCCACACGCGCACACTCC
GGAAGGACAAGAACAGAAAGAATGTTGAGCCCCGGCATTTCGGTCAAGAAGCGCCACGGCGGTGCCGGGTTCGCGCTCGG
GTGTGGCTGCAAGGACGCCAAGAGCGTGTCGGTGGTCCCCGCGTCGGTGTCTGCGTCGCCCTCGCCGTCCGGCGCGGGTA
CATCGACCACAACCGAGACGCGGCGCAGGGGCGGGAGGGCCAACCCGTCGGCGTCGATGACGACGGACACTCTGACCTCT
GCCTCGTCGTCGTCCTTGCTATGGGAGGACGCCGTGGCGGAGTTCGAATGCGGCGACGACGGCCACTTCAAGATGGAGGG
ATCGGCAGCCACGCAGAGCTTCTCCGGCTTGCTGCGCGAGCTCAACGAGCTGGAGCAGAGCGTCGTGTCGTGGGGCCGGA
AGAGCCACCGCAACCG---CGACAAGAAAGCCTCGACACCGCCACCGGAGCACAAGAAGGCGACCATGAAAAGTGGCGTC
AAGGGCGG------------CGACGTCACGACGGGCGGCGCTAAGGATCGCCGCGTCGGTGACAGCGTCGAACCGGT---
GACTGTTGACGCCTGCGTGGAAGTTGGGCTCGACGGCAGCGTGGCAGTGGTGAAGCAGTCCGAGGACCCGCTGAGCGACT
TCCGGCAGTCGATGGTGCAGATGATCGTGGAGAACGGGATCATCGCCGGGGAGGAGTTGCGCCAGATGCTCCGCCGCTTC
CTCACCCTCAACGCGCCGCACCACCACGACGTCATCCTCCGCGCCTTCGCGGAGATCTGGGACGCCGTGTTCGCGGCCTC
CTACGTGCCCGTCCCCGCCACCGCCCCGCCCAGCAAGCACACCCGCCGCGAGGAGCCCGCCGACGGAAGGCCGCCCATG-
--CCGAGGACCCCTCCGCGCCACCACCACTCGCCATCGCCATCAGCATGGCGCGTGTAGACGTACCGAAACGTGCTACCT
CGATTCAATATACCACTACCACTGTATCATTTCATTTAATTTCCGGTTAATTAGTATTGGAATG--------GCCACTGG
CTTATTATTGTACGT-------GAGTGAATCCGTATAAGAAAGCTCTTTGTGTGATTTCGTACTA-----TTTGTCTCCG
TTGTTCTCACGTGCAATGCAGCTCCATTTGCTACAAAGCCAGCGCGGATTCCCGCCTACGACAAGCCCGAGCACGTAGGC
GTGCCGGCGTCTACCAGACTACCG----GAAGATAGATCGGGCGTGCGTTGCTTCGGTTAGGAGTTGGACCGATGGGGAG
TGGAGACGAATGCCATGCATGCACGGGCGACAGCCAGTTGTGGTTGGATGGGAACGGGAGAGAGAG----TAGGGTCCGT
CTCGCTTGCATGCGCGCTCGCCCGTGCATTGCGGCCGGGGCAACCTGGACTGCATGGTCCATACGGCAACTTAAATTGTC
CGGTGCCCTTTCTCC--TAGCTAGCTAGCACTGGATTATTCC-----------TTGTGAAATTCCTTGCCGTGCATGCAT
GGCTCCCTGCTCCTAACAAT------------------------------------------------------------
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>SNPs
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS--S-------S------
---S-----------------------------------S----------S-------------------------SSSS
SSS-------------------SS-SSSS---------------------------S---------S--SSSSSSSSSSS
SSSSSS-----------------------------------------S--------------------------------
S----------------------------------------------------------------------S--------
----------------------------------S---------------------------------------------
--S-----------------------------------------------------------------------------
---------------S-------------------------------S-----------------S--------------
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----------------SSS----------------S--------------------------------------------
--------SSSSSSSSSSSS--------------------------------SS--------------------------
--------SS--S-----S-------------------------------------------------------------
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-----------------------------------------------------------------S------S-------
-------------------S-----------------S-------------------------S----------------
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-------------------------------------------------------------S--------SS--------
----------------S-S--------S----------------------------------------------------
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----------S---SSSS-SSS-SSSSS-----------------------------------------S--S-------
--------------------------------------------------------------S-----------------
---S------------S---------------------------------------------------------------
-S------------------------------------------------------------------------------
---------------S----SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
>forward_291
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-------------------------------TCTCCACCTCAAATGGCCAC-----------------------------
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>reverse_1537
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----------------CGACGACAAGAAAGCCTCGT--------------------------------------------
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>forward_292
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--------------------------------CTCCACCTCAAATGGCCACT----------------------------
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>reverse_2177
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----------------ATACGTGAGTGGGCCCGTAT--------------------------------------------
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