>input_sequence_62099
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------------------------------------------------------ATGGCCCATGTACTAGAGCAAAAACT
CGAGCCTAGTTGCCTCGGTGACGCGCTGACGGCAAGGAATGATGCGGACAACCTCGCTGAGCTCATCCCGTCGCT-GCCC
GTCGAGAAGCGGTTAGTGCCGCCGCCCGCCGACATGCAGAGGCGACAGTACCGTGGGTACTGGTTCCCCGAGTGGCACCT
GTCAGCCCTGGCGGCAGCCCGCGATCACTTCGAGCCCAAGCCAACGGACATCTTCCTGGTGAGCTGCCCCAAGTCTGGCA
CCACCTGGCTTAAATCGCTCGCCTTCGCCACTGTGCACCGGGA--------CGTCCACCCGCCATCCGGCCGGGAGCACC
CTCTGCTCCACAAAAACCCGCATGACTGCGTCAAATTCATCCACACAATCTATCGGCAACCGGTCGACGTTGTGCGGGAC
ATCGTCGAGGCGTACCCTTCCCCGCGTATCTTCGGCTCCCACTTCCCATTGTCCTTGCTGCCGGAGCGCATCAATGGCGA
TGGCTGCGGGTGCCGGATCGTCTACATCTGCCAGGATCCCAAGGACGTGGTCGTCTCGTGGTGGTGGTTCATGCGCACCT
ACCTCCCA---AACCCCGAGCAGGTCCGGTTCGAGGAGGTCTTCGATTTGTTCTGCGAGGGCCGCACAGGGGCGGGCCCT
TATTGGCGCCACGCCCTCGAGCATTGGGAGGAGAGCAGAAGAAGGCCCGACAAGGTGTTGTTCCTAAGGTATGAGGAGAT
GCTACGAGACCCACAGTGCAATCTTAGGAGGCTGGCGGAGTTTTTGGGGTGCGCATTCTCCGAGGCGGAGGAGAAGGCCG
GCGTCCTAGACGCCATCTTGGAGTTGTGCAGCCTCGGCGAGCTAAAGAAGCTGGAGGTGAACCAAAGTGGCAACAAGATT
AAGGACGAACCCATGATGAACCATTCCTTCTTCAGGAAGGGCGTGTCCGGTGACTGGATCAACCACATGACGCCGGAGAT
GGCGGCAAGGC-----------TCGATGCAATCGTCGAACAGGCGCTGCAAGGCACGGGATTTAACTTTGGCATCTCCAT
GCCACAGTAA----------------------------------------------------------------------
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--------------------------------------------------
>chr1D_1_TraesCS1D01G301500
CCCCGGCACCAGAAGCCAGCAACCCATGGCCATGGGGATTCCTGCATCCGCATCGGCAGGTGGTGTCGAATCTTTGCATT
GGTATATATATTTCGTAGAAGAGCATGTATACTGCAAAAGTAAACCTCATCCCATCTCCGGATTAGTTGGATTTGCATGT
TACACTAAGGGCATGTACAACAATGTCCAGTCAGCTCTCTGGAAGGGAGGACAACTAGGATTTTAGAAGATGTGGAAGAG
AGAGAAACAATCTGTCGGTAGAATTACCAACGATCTGTAGCCCTGAAAATCAAGTTGCTACAGACGGCTTTTTACCGTTG
TATGGAGTGCCGTCTGCAAAGCTTCCGGGAACTGCCTTCTTAAGCGGTGGATTAGTCTTCCAGTCCTCCATATTTTAGAA
TGCTACAGACAGTAGAACGACCAGTCTATTGTACGTGGTGTTTTTACCACTGTCTATAGTTGAGGTGGAGTGTCGTTAGA
GACAACCGTTGTCTAAACTAATGTACATGTCCTAAGGCGGAACAAGCTAGCATCCGCCGGGCTATCTCCAGCTCCATTTT
TGCCCCTTGCAGGGCTGCATCTAACAAGATCGACCCGGCGTACGTGCGTGCGTG----ATCAGCAGCGCCCTGCACAGCG
AGACGACCGGGAAAGTTCCTTCCGTTTTTTTTAGGATAAAGTTCCGTTCCGTTGCACGGAAGCAACTCGGGCGTGGCCAG
ATCCCAGCGCAGCGCCCCGGTGTCCGGTTCACGGCCGATGGATACGGACGCGGACGCGGCAACCACTTGTTAGTGGGACG
GAGGGAGTGATAGAAAATTCCCACGCCCAACACGAGAAAGAGAGATACCTTCGCTTTGTAGTTTTTAGTAACAAACATGA
ATGAAAGTGACTCCGCAACTGCACGCCTTCAACTGAGTATTTATGTGCAGCTTGCTCTTTGGCGCTTGCTCATCAG----
--ACTCATCAGAGTTGCACTTACTCCTACTA--GGTTTGTAATAGGCACGA--GATGGCCCATGTACTAGAGCAAAAACT
CGAGCCTAGTTGCCTCGGTGACGCGCTGACGGCAAGGAATGATGCGGACAACCTCGCTGAGCTCATCCCGTCGCT-GCCC
GTCGAGAAGCGGTTAGTGCCGCCGCCCGCCGACATGCAGAGGCGACAGTACCGTGGGTACTGGTTCCCCGAGTGGCACCT
GTCAGCCCTGGCGGCAGCCCGCGATCACTTCGAGCCCAAGCCAACGGACATCTTCCTGGTGAGCTGCCCCAAGTCTGGCA
CCACCTGGCTTAAATCGCTCGCCTTCGCCACTGTGCACCGGGA--------CGTCCACCCGCCATCCGGCCGGGAGCACC
CTCTGCTCCACAAAAACCCGCATGACTGCGTCAAATTCATCCACACAATCTATCGGCAACCGGTCGACGTTGTGCGGGAC
ATCGTCGAGGCGTACCCTTCCCCGCGTATCTTCGGCTCCCACTTCCCATTGTCCTTGCTGCCGGAGCGCATCAATGGCGA
TGGCTGCGGGTGCCGGATCGTCTACATCTGCCAGGATCCCAAGGACGTGGTCGTCTCGTGGTGGTGGTTCATGCGCACCT
ACCTCCCA---AACCCCGAGCAGGTCCGGTTCGAGGAGGTCTTCGATTTGTTCTGCGAGGGCCGCACAGGGGCGGGCCCT
TATTGGCGCCACGCCCTCGAGCATTGGGAGGAGAGCAGAAGAAGGCCCGACAAGGTGTTGTTCCTAAGGTATGAGGAGAT
GCTACGAGACCCACAGTGCAATCTTAGGAGGCTGGCGGAGTTTTTGGGGTGCGCATTCTCCGAGGCGGAGGAGAAGGCCG
GCGTCCTAGACGCCATCTTGGAGTTGTGCAGCCTCGGCGAGCTAAAGAAGCTGGAGGTGAACCAAAGTGGCAACAAGATT
AAGGACGAACCCATGATGAACCATTCCTTCTTCAGGAAGGGCGTGTCCGGTGACTGGATCAACCACATGACGCCGGAGAT
GGCGGCAAGGC-----------TCGATGCAATCGTCGAACAGGCGCTGCAAGGCACGGGATTTAACTTTGGCATCTCCAT
GCCACAGTAATC-AATC----GTGTATTCCTACACATATCTC-------CTGGTAGCCCGAAGGGAACTGTGAAGGCATT
CTATACCGTCACGAGGCATAT--CCAATGTGCCTCACCTTGGGGTTTTTATTTTCCGTCTTG-----TAAGCCGATTCAT
CGGCATCAATGCTTGGCTT-GCTTGGCATTATCATTCAATAATCAATAATATATGAGTGTTTGCATGCTGTTGGTATCCT
CTTTCTCAATGAAAAAGTAAAATATTTGTGGTTTGTTGTGGAAAA-AAACCTTTGCTTTGTGTATGTGTGCCTATGTTGT
TTCATCTCCAGCAAATACATGCTACAAGGTTTTTTTATAGCAAATGTTGCCTTTAAGAGCATCTCCAATACATGATGTAA
AATACATCACCAAAAAAT-GATTCTAGTAAAATTTATATCACCAAAAAATGCTTT---TTTAGATTATCGGAAACGTTCA
ACTCCAACAGATGATGTAAAATAGGACAG------------CCGCATGGCAGCCGCTCCAATGAATGATGTAGAAAAGGC
CAGCGGCG---CGACAAC--------------TTCAAACATATTTGAAGAAAAATCATCTCAAATTTAATACTTAAACAA
ACATAACAATAATTTCATCAATCCACAACATCAAATTATTACATAATTCATGAAATCCACAACATGAAATGCAGCACAAA
TACAACAAGGCTCAACAAACAATACGTCATAGTTCATGCGCAATACAACAAATATTGAGATGAAACTAGGAGGCTTGC--
--------------------CCTCCATGATATATTTTTGAAGATCATCGTGCGTATCGGACTCTCTGATGTCATGGTACA
CCTGCATGAAGCGCCTAATCTGATCTTCCCTTCTACTCGGCCAAAAGCGTATTTCCATGAGGTCATAA-AGGTCTAATCC
AAATTTTGTTCACGGTCATTCTCAACGATC--GTTGTGCTTGATCACAGAAGCAGTCATGATGTA-CCAAAGGCTCTTCT
GATCCCAATATCTAGCAAGTCTTCAATGCTATGTCCAAGCAAACCGGCAC
>chr1A_89
--------------------------------------------------------------------------------
--------TATTTCATAGAAGAGAATGTGTACTGCAGAAGTGAAGCTCATCCCATCTCCGGATTAGTTGGATTTGCAGGT
TACG----------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
-------------------------------CTAAGGCGGAACAAGCTAGCATCCGCCGGGCTATCTCCAGCTCCATTTT
TGCCCCTTGCAGGGCTGCATCTAACAAGATCGACCCGGCGTACGTGCGTGCGTGCGTGATCAGCAGCGCCCTGCCCAGCG
AGACGACCGGGAAAGTTC--------------------------CGTTCTGTTGCACGGAAGCAACTCGGGCGTGGCCAG
ATCCCAGCACAGCGCCCCGGTGTCCGGT-----------GGATATGGACGCGGACGCGGCAACCACTTGTTAGTGGGACG
GAGGGAGTGATAGAAAATTCCCACGCCCAACACGAGAAAGAGAGATGCCTTCACTTTGTAGTTTGTCCCAACAACCATGA
ATGAAAGTGACTCCGCAACTGTCCGCCTTCAACTGAGTATTTATGTGCAGCTTGCTCCTTGGCGCTTGCTCATCAG----
--AC---------TTGCACTTACTCCTACGA--GGTTTGTAATAGGCACGA--GATGGCCCGTGTAGCGGAGCAAAAACT
CCAGCCTAGTTGCCTCGGTGACGCGCTGACGGCGAGGAACGATGCCGACAACCTCACCGAGCTCATCCCGTCGCT-GCCC
GTCGAGAAGCGGCTAGTGCCGCCGCCCGCCGACATGCAGAGGCGACAGTACCGTGGGTACTGGTTCCCCGAGTGGCACCT
GTCGGCCCTGGCGGCAGTCCGCGATCACTTCGAGCCCAAGCCAACGGACATCTTCCTCGTGAGCTGCCCCAAGTCTGGCA
CCACATGGCTTAAATCTCTAGCCTTCGCCACTGTGCACCGGCA--------CGTCCACCCGCCATCCAGCCAGGAGCACC
CTCTGCTCCACCAAAACCCGCATGGCTGCGTCAAATTCATCCACGCAATCTATCGGCAACCGGTCGATGTTGTGCAGGGC
ATCATCGAGGCGTACCCTTCCCCGCGTATCTTCGGCTCCCACTTCCCATTGTCCTTGTTGCCGGAGCGCATCAATGATGA
TGATTGCGGGTGCCGGATCGTATACATCTGTCGGGATCCCAAGGACGTGGTCGTCTCGTGGTGGTGGTTCATGCGCACCT
ACCTCCCA---AACCCCGAGCAGGTCCAGTTCGAGGAGGTCTTCGATTTGTTTTGCGAGGGCCGCACAGGTGCGGGCCCT
TATTGGCGCCACGCCCTCGAGCATTGGGAGGAGAGCCGGAGAAGGCCCCACAAGGTGTTGTTCCTCAGGTACGAGGAGAT
GCTACGAGACCCGCAATGCAATCTTAGGAGGCTGGCGGAGTTTTTGGGGTGCGCATTCTCCGAGGCGGAGGAGAAGGCCG
GCGTCCTAGAGGCCATCTTGGAGTTGTGCAGCCTTGGCAAGCTAAAGAAGCTGGAGGTGAACCAGAGCGGCAACCGGATT
AATGACGAACCCATGATGAACGATTCCTTCTTCAGGAAGGGGGTGGCCGGTGACTGGATCAACCACATGACGCCAGAGAT
GGCGGCAAGGC-----------TCGATGCAATCGTCGAACAGGCGCTGCAAGGCACCGGATTTGACTTCGGCATCTCCAT
GCCACAGTAATC-AATC----GTGTATTCCTACACATATCTC-------CTGGTAGCCCCGAGGGAACTGTGAAGGCATT
CTATACCGTCACGAGGCATAT--CCAATGTGCATCATCTTGGGGTTTTTATTTTCCTTTTTG-----TAAGCCAATTCAT
CGGCATCAATGTTTGGCTT-GCTTGGCATTGTCATTCAATAATCAATAATGTATGAGTGTGTGCATGCTGTTGGTGTCCT
CTTTCTCAATGAAAAAGTAAAACATCTGTGGTTTGTCGTGGAAAAGAAACATTTGCTCTCTGTATGTGTGCCTGTGTTGT
TTCATCTCCAGCAAATATATGGTACATGTTTTTTTACAAT-AAATGTTGCCTTTAAGAGCATCTCCAATACATCACGTAA
AATACATCATCAAAAAAT-GATTCAAGTAAA-TTTACATCACCAAAATGCTCTTT---TAAA-ATTATCAGAAATGTTCA
ACTCCAACAGATGGTGTAAAATAGGGC----------------------------CTCCAATGAATGATGTAGAAAAGGC
CAGCAGCG---CAACAAC--------------TTCAAACATATGTGAAGCAAAATCATCTCAAATTTAATACTTAAACAA
ATATAACAACAATTTCATCAATTCACAACATCAAATTATTACATAATTCATGAAATCCACAACATGAAATGCAACACAAA
TACAACAAGGCTCAGCAAACAATATAACATAGTTCATGCGCAATACAACAAACATTGAGATGAAATTAGGAGGCTTGCTC
CCCAAACCATG-CCACCACTCCTCCATGATATCTTTTTGAAGATCATCGTGCGTATCGGACTCTCTGATGTCATGGTACA
CCATAATGAAGCGCTTGATTTGATCTTCCCTTCTACTCAGCCGAAGGTGTCTTTCCATGAGGTCATAGAAGGTCTAATCC
AAAAAAA--TCACGGTCATTCTCAACGATCATGTTGTGCTTGATCACACAAGCAGTCATGATGTA-C-AAAGGTTCTTCT
GATCCCAATATCTAGCCAGTCCTCAGTGCTATGTCCAAGCAAACTGGC--
>chr6D_801
--------------------------------------------------------------------------------
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----GAGTAATAGAAAATTACCACGCCCAACATGAGAAGGAGAGATGCCTTCACTTTGTAGTTTGTACTAACAAAGATGA
AAGAGACCCCGCAACCAACTGCACGGCTTCAT----GTATTTATGCCTAGCTTGCTCCTTGGTATCTGCTCATCAGACAT
CCAC---------TTGCACTTGCTCCTACAACCGGTTTGTAATAGGCACAA--GATGGCCCATGTAGCAAAGAAAAAACT
CGAGCGTGGCTGCCTCGCTGACACGCTGCCGGCGACAAACGGTGCCGACAACCTCGCCGAGCTCATCCCGTCGCT-GCCC
GTCGAGAAGCGGTTACTGCTGCCGCCCGCCGGCTCGCAGAGGCGACAGTACCGTGGGTATTGGTTCCCGGAGTGGCACCT
GTCGGCCCTGGCGGCTGTCCGTGACCACTTCGAGCCCAAGCCAACGGACATCTTCCTGGTGAGCTGCCCCAAGTCCGGTA
CCACCTGGCTTAAATCACTGGCCTTCGCCACCGTGCATCGTGA--------TGTCCACCCGCCGTCCAGCCGCGAGCACC
CTCTCTTGCACAAAAACCCGCATGGCTGCGTCGAATTCATCGACGCAATCTATCGGCAACCGGTCGACGTTGCACGGGGC
ATCGTCGAGGCGTGCCCTTCCCCGCGCATCTTCGGCACCCACTTCCCTTTGTCCTTGCTGCCGGAGCGTATCAGCGGCGA
TGGCAGCGGGTGCCGGATTGTCTACATCTGCCGGGACCCCAAGGACGTGGTCGTCTCATGGTGGTGGTTCATGCGCACCT
ATGTCCCA---AACCCCGAGCAGGTTCGGTTCGAGGAGGTCTTTGACTTGTTCTGCGAGGGCCGCACAGGCGCGGGCCCT
TATTGGCGCCACGCCCTCGAGCATTGGGAGGAGAGCCGGAGAAGGCCCGGCAAGGTGTTGTTCCTCAGGTATGAGGAGAT
GCTGCGAGACCCGCATGGCAACCTTAGGAGGCTGGCGGAGTTTTTGGGGTGCCCCTTCTCTGAGGCGGAGGAGAAAGCCG
GTGTCATGGACGCCATCTTGGAGCTCTGCAGCCTGGACAAGCTAAAGAAGCTGGAGGTGAACCAGAGCGGCAACAAGATT
AAGAACGGACTCGTGATGAACCATTCCTTCTTCAGGAAAGGGGTGTCCGGTGACTGGATCAACCACATGACGCCGGAGAT
GGCGGCAAGGC-----------TCGATGCAATCGTCCAACAGGAGCTGCAAGGCACCGGATTTGGCTTTGGCATCCCCAC
GCCACAGTAATC-AATCAATCATGTATTTCTACACCATATCT---GCAGCTGGTCGCCCTGGAGGAAATGTGAAGGCATT
CTATACCGTCATGAGGCATAT--CCAATGTGCCTCAGCTCGGGGGTTTTATTTTTCCTTTTTGTATATAAGCCGATTCAT
CGGTATCAATGCTTGGCTT-GCTTGGCATTGTTGTTAAATAATCAATAATATATG-------------------------
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--------------------------------------------------
>chr6D_877
ATGAAA--------------------------------------------------------------------------
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-----AGAGACTCGGAAACTGCAGGCCTTCAT----GTATTTATGTCTAGCTTGTTCCTTGGTACCTGCTCATCAGACAT
CCAC---------TTGCACTTACTCCTACGAGCGGTTTGTAACAGGCACAA--GATGGCCCATGTAGCAGAGCAAAAACT
CGAGCGTAGTTGCCTCGGTGACGTGCTGCCGGCGAAGAAGGATGTCGGCAACCTCGCCGAGCTCATCCCGTCGCT-GCCT
GTCGAGAAGCGGTTACTGCTGCCACCCGTCGGCTCGCAGAGGTGACAGTACCGTGGGTACTGGTTCCCGGAGTGGCACCT
GTCGGCCCTGGCGGCAGCCCGCGACCACTTCGAGCCCAAGCCAACAGACATCTTCCTGGTGAGCTGCCCCAAGTCCGGCA
CCACCTGGCTTAAATCTCTAGCCTTCGCCGCCGTGCACCGGGA--------CGTCCACCCGCCGTCCAGCCACGAGCACC
CTCTGTTGCACAAAAACCCGCATGGCTGTGTTGAATTCATCCACACAATCTATCGGCAACCGGTCGACGTTGCGTGGGGC
ATCGTCCAGGCGTACCCTTCCCCGCGCATCTTCGGCACCCACTTCCCCTTGTCCTTGCTGCCGGAGCGCATCAGCGGCGA
TGGCAGCGGGTGCCGGATCATCTACATCTGTCGGGATCCCAAGGACGTGGTCGTCTCGTGGTGGTGGTTCATGCGCACCT
ACGTCCCA---AACCCCGAGCAGGTCCGGTTCGAGGAGGTCTTCGAGTTGTTTTGCCAGGGTCGCACAGGCGCGGGCCCT
TATTGGCGCCACGCCCTCGAGCATTGGGAGGAGAGCCGGAGAAGGCCTGAAAAGGTGCTGTTTCTCAGGTATGAGGAGAT
GCTGCGAGAGCCGCGGGGCAATCTTAGGAGGTTGGCCGAGTTTTTGGGGTGCCCGTTCTCCCAGGTGGAGGAGAAGGCCG
GCGTCCTGGACGCCATCTTGGAGCTCTGCAGCCTGGACAAGCTAAAGAAGCTGGAGGTGAACCAGAGCGGTAACAAGATG
AAGGACGGACCCGTGATGAACCATTCCTTCTTCAGGAAGGGGGTGTCCGGTGACTGGATCAACACCATGACGCCGGAGAT
GGCGGCACGGC-----------TCGATGCAATTGTCCAACAGGCGCTGCAAGGCACCGGATTTGGCTTTGGCATCTCCAC
GCAACAGTAATATAATCAATCGTGTATTCCTACACCGTATCTCCTGCAGCTGGTAGCCCTGGAGGAACTGTGAAGGCATT
CTATACCGTCATGAGGCATAT--CCAATGTGCCTCAGCTTGGGGGTTTTGTTTTTCCTTTGTG--TATAAGCCGATTCAT
CGGTATCAATGCTTGGCTTTGCTTGGCATTGCTGTTAAATAATCAATAATATATG-------------------------
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--------------------------------------------------
>chr6A_943
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------------------------------------------------------------------TGCTCATCAGACAT
CCAC---------TTGCACTTACTCCTACGACCGGTTTGTAATAGGCACAA--GATGGCCCATGTAGCAGAGAAAAAACA
CGAGCGTAGCTGCCTTGCTGATGCGCTGCCGGCGACGAACGGTGCCAACAACCTCGCCGAGCTCATCCCGTCGCTTGCCC
GTCGAGAAGCGGTTACTGCTGCCGCCCGCCGGCTCGCAGAGGCGACAGTACCGTGGGTACTGGTCCCCGGAGTGGCACCT
GTCGGCCCTGGCGGCTGTCCGTGACCACTTCGAGCCCAATCCAACGGACATCTTCCTGGTGAGCTGCCCCAAGTCCGGTA
CCACCTGGCTTAAATCATTGGCCTTCGCCACCATGCATCGTGATGTCCAGTTGTCCACCCGCCGTCCAGCCGCGAGCACC
CTCTCTTGTACAAAAACCCACATGGCTGCGTCAAATTCATCCACGCAATCTAT-----ACCGGTCGACGTTGCGCGGGGC
ATCGTCGAGGCGTAGCCTTCGCCGCGCATCTTCGGCACCCACTTCCCCTTGTCCTTGCTGCCGGAGCACATCAGCGGTGA
TGGCAGCGGGTGCCGGATCGTCTACATCTGCCGGGACCCCAAGGGCGTGGTCGTCTCGTGGTGGTGGCTCATGCGCACCT
ACGTCCCA---AACCCCGAGCAGCTCCAGTTCAAGGAGGTGTTCGAT--------------------------------T
TATTGGCGCCACGCCCTCGAGCATTGGGAGGAGAGCCGGAGAAGGCCCGACAAGGTGCTGTTCCTCAAGTATGAGGAGCT
GCTGCGAGACCCGCATGGTAATCTTAGGAGGCTGGCGGAGTTTTTGGGGTGCCCCTTCTCTGAGGCGGAGGAGAAAGCCG
GTGTCATGGATGCCATCTTGGAGCTCTGTAGCCTGGACAAGCTAAAGAAGCTGGAGGTGAACCAGATCGGCAACAAGTGG
AAGGACGGACCCGTGATGGACCATTCCTTCTTCAGGAAGGGGGTGTCCGGTGACTGGATCAACACCATGACGCCGGAGAT
GGCGGCACGGC-----------TCGATGCAATCGTCCAACAAGCACTGCAAGGCACTGGATTTGGCTTTGGCATCTCCAC
GCAACAGTAATATAATCAATCATGTATTCCTACACCGTATCTCCTGCAGCTGGTAGCCCTGGAGGAACTGTGAAGGCATT
CTATACCGTCATGATGCATATATCCAATGTGCCTCAGCTCGGGTGTTTTGTTTTTCCTTTTTGTATATAAGCCGATTCAT
CGGTATCAATGCTTGGCTT-GTTTGGCATTGTTGTTAAATAATCAATAATATATG-------------------------
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--------------------------------------------------
>chr1D_991
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------------------------------------------TAGGCACAAGCGATGGCGCATGTACCAGAGCAAGAAGC
CAAGCGTAGCTGCCTCGGTGACGCCGCGAAACG-----AGGACGCCGACAACCTTGCCGAGCTCATCCCCTCGCT-GCCG
GTCGAGAAGCGGTTCCTGCTGCCGTTCCCCGGCTCGCAGAGGCGGCAGTACCGCGGGTACTGGCTCCCGGAGAGCAACCT
GCTGGCCCTGGCGGCAGCCCGCCGCCGCTTCGAGGCCAAGCCCACGGACGTCTTCCTGGTGAGCTGCCCCAAGTCCAGCA
CCACGTGGCTCTCGGCGCTCGCCTTCGCCACCGTGCACCGCGG--------CGCGCACCCGCCGTCCTCCCACGACCACC
CGCTGCGCCGCCAAAGCCCGCACGCCTGCGTCCTGTCCGTCAAGACGCTGTTTCGGCAGCCGAACGACGTCGCGCGAGGC
ATCCTCGAGTCCTGCCCGTCCCCGCGCATCTTCTTCACCCACTTCCCGCTGTCCCTGCTGCCGGAGCGCATCGCCGGCGA
CGGCTCCAGGTGCCGGATCGTCTACATCTGCCGGGACCCCAAGGACGTGGTGGTCTCCTGGTGGCGGTCCTTGCGCGCGT
GCATCCCG---GACCCCGAGGGGGCTCGGTTCGACGAGGTCTTCGATTTGTTCTGCCAGGGCCGCAACGGCGGGGGCCCT
TACTGGCGCAATGCACTCGAGCATTGGGAGGAGAGCCGGAGAAGGCCACGCAAGGTGCTGTTCCTCAGGTATGAGGAGAT
GCTGCGAGACCCGCAGGGCAATCTCAGGAGGCTGGCGGAGTTCCTGGGGTGCGCGTTCTCTGACGCGGAGGAGAAGGCCG
GCGTCGTGGACGCCATCTTGGAGCTCTGCGGCGTGGAGAAGCTAAACGAGCTTGAGGTGAACCAGAGTGGTGAAAAGACG
GGGGAGCAGCGTGTCTCGGACGGTTCCTCCGTCAGGAAGGGGGTCGCCGGCGACCGGAGCAACCACATGACGCCGGAGAT
GGCGGCAAGGCGGCGGCAAGGCTCGATAAGATCGTCCAAGAGGCGCTGCAGGGAACCGGATTTAGCTTTGACATCCCCAC
GTCACAGTAATC-A------------------------------------------------------------------
--------------------------------------------------------------------------------
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-------------------------------------------------TGTGTAT------------------------
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--------------------------------------------------
>chr1B_1073
--------------------------------------------------------------------------------
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----------------------------------------------GACAACCTTGCCGAGCTCATCCCCTCGCT-GCCT
GTCGAGAAGCGGTTCCTGCTGCCGTTCGCCGGCTCGCAGAGGCGGCAGTACCGCGGGTACTGGCTCCCGGAGAGCAACCT
GCTGGCCCTGGCGGCAGCCCGCCGCGGCTTCGAGGCCGAGCCCACGGACGTCTTCCTCGTGAGCTGCCCCAAGTCCGGCA
CCACGTGGCTCTCGGCGCTCGCCTTCGCCACCGTGCACCGCGG--------CGCGCACCCGCCGTCCCACCGCGACCACC
CGCTGCGCCGCCAAAGCCCGCACGCCTGCGTCCTGTCCATCAAGACGGTCTTCCGGCAGCCGGACGACGTCGCGCGAGGC
GTCCTCAAGGCCTACCCCTCCCCGCGCATCTTCTTCACCCACTTCCCGCTGTCCCTGCTGCCGGACCGCATCGCCGGAGA
CGGCTCCGGGTGCCGGATCGTGTACATCTGCCGGGAG-CCAAGGACGTGGTGGTCTCCTGGTGGCGGTCATTGCGCGCGT
GCGTTCCGGACGACCCCGAGGGGGCTCGGTTCGACGCGGTCTTCGATTTGTTCTGCCAGGGCCGCAACGGCGGGGGCCCT
TGCTGGCGCAACGCCCTCGAGCATT---------GCCGAAGAAGGCCACGCAAGGTGCTGTTCCTCAGGTGCGAGGAGAT
GCTGCGAGAGCCGCAGGGCAATCTCAGGAGGCTGGCGGAGTTCCTGGGGTGCGCGTTCTCGGAGGCGGAGGAGAAGGCCG
GCGTCGTGGACGCCATCTTGGAGCTCTGCGGCATGGAGAAGCTAATGGAGCCTGGGGTGAACCAGAGTGGTGAAAAGACG
GG---------------GGAGCATTCCTCCGTCAGGAAGGGGGTCGCCGACGACCGGAGCAACCACATGACGCCGGAGAT
GGCGGCAAGGC-----------TCGATAAGATCGTCCAAGAGGCGCTGCACGGAACCGGATTTAGCTTTGGCATCCCCAC
GCCACAGTAACC-A------------------------------------------------------------------
--------------------------------------------------------------------------------
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-------------------------------------------------TGTGTAT------------------------
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--------------------------------------------------
>chr5D_2396
--------------------------------------------------------------------------------
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-----------------------------------------------------TAAGAGCATCTTCAATAGATGATGTAG
AATACATCAC-AAAAGAT-GGTTCGAGTAAAATTTATATCACCAAAAAGTAAAAAAAATTAC-ATCACCAAAAACATGCA
ATTCCGACAGATGATGTAAAATAGGGCAG------------CC-----------GCTCCAATAGATGATGTAAAATAGGT
CAGTTGCA---CAACAACAACTCAACAATTATTTCAGACATATTTGAATTAAAATCATCTCAAATT-AATCCTTAAACAA
ACATAACACTAATTTCATGAATTCACAACATCAAATTATTACATAATTCATCAAATCCACAACATGAAATGCAAAACAAA
TACAACGAAGTTCAGCAAACAATACAACATAGTTCATGCATAATACAACAAATATAGAGATGAAACTAGGAGGCCAGTTC
CCCATGCCATGTCCAGCACTCCTCCATGATATCTTTTTGAAGATCATTGTGCGTATCGGTCTCTCTGATGTCATGGTACA
CCTC-ATAAAGCGTTTGATTCGGTCTTCCCTTCTAGTCGGCCGAACACGTATTCCCATGAGGTCATAG-AGGTGTAATCA
AAATTTTGTCCCCGCCCATTATTAATGATCATATTGTGCATGATCAAGCAAGCAGTTAGGATGTACC-AAAGGTTCTCCT
GATCCCAAAATCTAGCCAGTCCTCA-------------------------
>chr5B_2396
--------------------------------------------------------------------------------
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-----------------------------------------------------TAAGAGCATCTTCAATAGATGATGTAG
AATACATCAC-AAAAGAT-GGTTCGAGTAAAATTTATATCATCAAAAAGTAAAAAATAATAC-ATCACCAATAACATGCA
ATTCCAACAGATGATGTAAAATAGGGCAG------------CC-----------GCTCCAATAGATGATGTACAATAGGT
CAGTCACA---CAACAAAAACTCAAC-ATTATTTCAGACATATTTGAATAAAAATCATCTCAAATT-AATCCTTAAACAA
ACATAACACTAATTTCATGAATTCACAACATCAAATTATTACATAATTCATCAAATCCACAACATGAAATGCAAAACAAA
TACAACGAAGTTCAGCAAACAATACAACATAGTTCATGCATAATACAACAAA-ATAGAGAT-AAACTAGGAGGCCTGTTC
CCCATGCCAAGTCCAGCACTCCTCCATGATATCTTTTTGAAGATCATTATGTGTATCGGTCTCTCTGATGTCATGGTACA
CCTCCATAAAGCGTTTGATTCGGTCTTCCCTTCTAGTCGGCCGAACGCGTATTCCCATGAGGTCATAGAAGGTGTAATCA
AAATTTTGTCCCCGCTCATTATAAATGATCATATTGTGCATGATCACGCAAGCAGTTAGGATGTACC-AAAGGTTCTCCT
GATCCCAAAATCTAGC----------------------------------
>chr1D_2403
--------------------------------------------------------------------------------
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------------------------------------------------------------ATCTCCATTAGATGATGTAT
TTTACATCAC-CAAATTGCGGTTGGAGTAAAATATACATTATCAAAATGTGTTTT---TTAC-ATCA-CAAAAACGGCCA
ACTTCGACAGATAATATAAAATTAGGGCAGCAGCACGACCACC-----------GCTTCAATAGATAATGTAAAATAGGG
CAACAACAACACATCAAT--------------TTCAAACATATTTTAAGCAAAATCATCTCAAATT-AATACTTAAACAA
ACATAACAATAAATTCATCAATCCACGACATCAAACTACAACATAATTCATGAAATCCACAACATGAAATGCAACACAAA
TACAACAAGGTTCAGCAAACAATACATCATAGTTCATGCACAATACGACAAACATGGAGATGAAACTAGGAGGCTTGCTC
CGTATGCCATGTCCACCATCCCTTCAGAATATTTTTTTGAAGATCATCGTGCGTATCGGACTCTCTGATGTTTGGGTACA
CCTGCATGAAGCGTCTAATTCGGTCTCCCCTTCTACTCGGCAGAACAAACATTCCCATTAGGTCATAGAAGGTGTA----
------TGTCCACGCTCATTCATAATGATCATGTTGTGCATGATCACGCAAGTAGTCATGATGTACC-AAA---------
--------------------------------------------------
>SNPs
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSS------S--------S----S-------S----S--S--------------------------------S--
---SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS-------------------------------------------------
--------------------------------------------------------------------------S-----
------------------SSSSSSSSSSSSSSSSSSSSSSSSSS-----S------------------------------
--------S-------------------SSSSSSSSSSS-----S-----------------------------------
----------------------------------------------S-----S-----------S--S------------
---------------------------------------------------------S----------------------
----SSSSSSSSS----------------S-------------------------------------S------------
---------------------------------S-----S-----S-----------S----------------------
--------------------------------------------------------------------------------
---S----------------------------------------------------------------------------
-------------------------------------------------------------------S------------
------------------------S-----------------------------------------------------S-
--------------------------------------------------------------------------------
--------------------------------S-----------------------------------------------
----------------------------------------------------------------------S---------
------------------------------------S----------------------------S--------------
------------S-------------------------------------------------------------------
----------------------------------S---S-------------------------S---------------
-----------------------------------------S--------------------------------------
--------------------------------------------------------S-----------------------
-----------------------------------------------------------SS-------------------
------------------------------------S-------------------S-S---------------------
------------------------------S-----------------------------S--------------S----
----------------------S--S----------S-------------S------S-S-------------S------
-----------------S---S----S-S------SSS-SS---------------------------------------
------------------------S-----------------------S-----------S-S------S----------
-------------------------S-----------------SSSSSSSSSSS--------------------------
----S-------S-------------------------------------------------------------------
-------------------------------------------------------------------------S------
--------------S----------S------------------------------------------------------
--------------------------------S-----------------------------------------------
-------------------S----------------------S--S---------------------S------------
------------------------------------------------S------------------S-----S------
----------------S----S---S------------------S---SS
>forward_661
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-GACGACCGGGAAAGTTCCTT-----------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------
>reverse_2645
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----GGCGCGACAACTTCAAACAT--------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------
