>input_sequence_62014
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-------------------------------------ATGGCC---------GGCACCGGCGGCTTGTCGGAGTCGGTGA
TGCGGAAGGTGCTGCTGTCCTACTGCTACGTGGCGGTGTGGATCTTCCTCTCCTTCGCCGTCATCGTCTACAACAAGTAC
ATCCTCGACCCCAAGATGTACAACTGGCCCTTCCCCATCTCGCTCACCATGGTGCACATGAGCTTCTGCTCCTCGCTCGC
CGTGGGGCTCGTCCGCGTCCTGCGGGTCGTTGAGCCGCCCTCCTCCCCGCCCATGACGCCGCAGCTCTACACCTCCTCCG
TCGTGCCCATCGGCGCGCTCTACGCCATGTCGCTCTGGTTCTCCAACTCGGCATACATCTACCTCTCCGTCTCCTTCATC
CAGATGCTCAAGGCGCTCATGCCCGTCGCCGTCTACTCCATCGGCGTCCTCTTCAAGAAGGAGACCTTCAGGTCATCCTC
CATGCTCAACATGCTCTCCATCTCCTTCGGCGTCGCCATCGCCGCCTACGGCGAGGCCAGGTTCGACCTCCGTGGCGTCG
CGCTCCAGCTCGCCGCCGTCGCCTTCGAGGCCACCCGCCTCGTGCTCATCCAGATCCTGCTCACCTCCAAGGGCATCTCG
CTCAACCCCATCACCTCGCTCTACTACGTCGCGCCCTGCTGCCTCTGCTTCCTGCTCGTGCCCTGGATCTTCGTCGAGCT
GCCCAGGCTGCG---------CGCCGTCGGCACCTTCCAGCCCGACTTCTTCATCTTCGGCACAAACTCGCTCTGCGCCT
TTGCGCTCAACCTTGCGGTGTTCCTGCTCGTTGGCAAGACCTCCGCGCTCACCATGAATGTTGCGGGAGTGGTCAAGGAC
TGGCTGTTGATTGCCTTCTCCTGGTCCGTGATCCGGGACACGGTCACCCCCATCAACCTCTTCGGCTACGGCATCGCCTT
CTTAGGGGTTGGCTACTACAACCATATCAAGCTGCAGGCGCTCAAGGCCAAGGAGGCGCAGAAGAAGTCCGCGCAGGCCG
ACGAGGAGGCCGGCTCCCTGTTGCAGGAGCGCGATAGCCA---CAGTGATCGCAAGAGCGAGAACCAGGCATAG------
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--------------------------------------------------------
>chr1B_1_TraesCS1B01G322400
TTAATTTTTTTATATATATTTCAGATTTTTTTATAGATGTATACGTAAAATATAGCCCAATAGGTCTAAAAACCAGCCCA
ACAGGGTGAAAATATGCAGCCCAGCGTGCTAAACGTACCATCGGGCCGGCCCGTTTACTAATCAGGCCGTGCCTGGGCTA
AGGAGCTGCGCCCGTGGGCCGGCACGGCACGGCCCGGCTATTAAACGTGCCACGGCGGGCCGTGCCGGGCCAGGCACGAT
TAGCACAGGCCGTGCCGTGCCGTGCCGTGCCGGGCCGGCCCGTCTGGCCAGGTATGCTCTTAAGTCGGTCAACCAGCTTA
ATTTTTTTCTTCA------GTTTTTGCGTGGCAACAGGTGAAGCTTCGTGCCACGAGATAGTGAAAATCGATGTAAGAAC
CATGCCATTGCCACTCCATGACACCAACTATCTGATTCTTTTTT--ACTACTAATACATCTAGGCGATCTATGATCTATC
CTAACACATGCGGCTCATTGACCGTGTCACTCAACGGTAGGTGT------------------------------------
----TGGAGGCGTAGAAACGCGCCACACACACATGGAGTTACCCATGACAGTACAAAACGCAGGCACTTTTTAAACCATC
ACGTCAACGTCACAGCGGCCGGATTTACCGGCCCGAAAAGAGAAG-----AAAAAAGAGAGGTGGGAATCCAGCCGGAGC
AAAGACGAGTCAAAGCGGGAGCTCCCCGGCGGAAAGAAG---GAAAGAAA----AGGAAAGCTATTGTATTCTCCACGTG
GCCAGCGCGCCCAGTCCAAGCACCCATCCCCTCGCCCTCGCCTCACCTAAACCCCCCCGCAAC-----CTTAACCCATCC
CCACCGCCAGCCCCCAGCCCGTGTCCCCAGCCCCAAATCCTCAGATCCGCCTCCGCTCCCCCTCCTGCCCCCCCGCCCGA
GTCCAAGTCCAC----CCCT------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------CCCCACCGCGGCGCGCACGCAC----CCGGCCACCACCCACCCGGATCCAGATCCGCCCGGCGGC
G---------GCGGCGGCGGCGGCGCAGGGGGGAGCCATGGCC---------GGCACCGGCGGCTTGTCGGAGTCGGTGA
TGCGGAAGGTGCTGCTGTCCTACTGCTACGTGGCGGTGTGGATCTTCCTCTCCTTCGCCGTCATCGTCTACAACAAGTAC
ATCCTCGACCCCAAGATGTACAACTGGCCCTTCCCCATCTCGCTCACCATGGTGCACATGAGCTTCTGCTCCTCGCTCGC
CGTGGGGCTCGTCCGCGTCCTGCGGGTCGTTGAGCCGCCCTCCTCCCCGCCCATGACGCCGCAGCTCTACACCTCCTCCG
TCGTGCCCATCGGCGCGCTCTACGCCATGTCGCTCTGGTTCTCCAACTCGGCATACATCTACCTCTCCGTCTCCTTCATC
CAGATGCTCAAGGCGCTCATGCCCGTCGCCGTCTACTCCATCGGCGTCCTCTTCAAGAAGGAGACCTTCAGGTCATCCTC
CATGCTCAACATGCTCTCCATCTCCTTCGGCGTCGCCATCGCCGCCTACGGCGAGGCCAGGTTCGACCTCCGTGGCGTCG
CGCTCCAGCTCGCCGCCGTCGCCTTCGAGGCCACCCGCCTCGTGCTCATCCAGATCCTGCTCACCTCCAAGGGCATCTCG
CTCAACCCCATCACCTCGCTCTACTACGTCGCGCCCTGCTGCCTCTGCTTCCTGCTCGTGCCCTGGATCTTCGTCGAGCT
GCCCAGGCTGCG---------CGCCGTCGGCACCTTCCAGCCCGACTTCTTCATCTTCGGCACAAACTCGCTCTGCGCCT
TTGCGCTCAACCTTGCGGTGTTCCTGCTCGTTGGCAAGACCTCCGCGCTCACCATGAATGTTGCGGGAGTGGTCAAGGAC
TGGCTGTTGATTGCCTTCTCCTGGTCCGTGATCCGGGACACGGTCACCCCCATCAACCTCTTCGGCTACGGCATCGCCTT
CTTAGGGGTTGGCTACTACAACCATATCAAGCTGCAGGCGCTCAAGGCCAAGGAGGCGCAGAAGAAGTCCGCGCAGGCCG
ACGAGGAGGCCGGCTCCCTGTTGCAGGAGCGCGATAGCCA---CAGTGATCGCAAGAGCGAGAACCAGGCATAGAGCTCC
AGATCGGATCCGGGCATGCCCACATTGGTTGGTTCTAAAATCCATTTGTGTGATTTTTCTTTTTCAACTGCATGCACAAT
AGGCTTGTTATTTTTCTTGACTTGCCATGGTAGAGGAAT-AAAATTGGAGAAATGTATGATTCATTGGCAATATGAAAAT
CGCGATGTACTTTGCCCACTTGTGTTCTTTGTTGAAGTAGTAAAATTGTAAAGATCAATGGGGATG---CTTTTCCACAA
TTAAGTTGCTGTCGTTCTACTTTTTATGGTGGGGACTATCATATAGATC--------TACATGCTTTCTGTCAGAATAAG
TAAT-TTTTCATAGATAGAAACATGAGAGTACTCGAAATTGTTATTGTTTGCTCACTATGCATCTTCCTTATCCTAATTA
TGATGTGTGCTGGACAGGGAATCTGGTGCAAAGTGCAAAGACTATAGTTTGGTCTACAGTTGCTTTCAAGGAGGTGGATG
CCGGTTCTGGTTTATCTTTTTAACTTTAGTTGGATCTGAGGAGAAAACCAAGGCAATTTGTTGATCTAGGAAATACTTGC
ATTTGAACCTGTTTCTGGAGGGTTAGAAGGAACACTTATATTACCCTGTTATTTATTTTTGCGTTTTTGTTCTGAAAGGC
GGCCTTGCTTCCTCTCTCGCTCATTCCGTATTTATTTGGTCGAGTAGCCTAGGTAAAAATGTACTGCACATTGGTATCAT
TTCGGTGGGTATCATCTGGTGGTTATCATCTATATATAATGAGCTTACTGTAAACTATATTCAATAGTTGCCTCCTTTAG
CTTTTAATATCTTGTGATTATGCTTCGGTTTGTTGCATGGTTAGGTGAATATTTGCCTGATCAGTTTTCACCTGACAACG
TATTGCTAAGATTCTTTTACATGTTATAAAGGTAACACTATTATCAGTT---GTATATGGTTTGTTTTGTCACTAGGTGC
GGTAACTTAACTT------AAGTTGCATTGTCATGTATTCAGGTATGAGAACCATG
>chr1D_290
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------AGGCAAGCTCTTAAGTCGGTCAACCCGCTTA
TTTTTTTTCTTCTTTCAGTGTTTTTGCGTGTCAATAGGTGAAACTTCGTGCCACGAGACGGTGAAAATCGATGTAAGAAC
CATGCCATTGCCACCCCATGACACTAACTATTTTCTGGTTTTTT--ACCATAACCT-----------------ATCTATC
CTCACACACACGGCTCATTGACCATGTCACTCAACGGTAGGTGATGTAACTTGGACACGTATTTTCGCGGAAAAAGAAGT
GG--TGGAGGCGTAGAAACGCGCCACACACACATGGAGTTACCGATGACAGTACAAAACGGTGGCACTTTTTAAACCACC
ACGTCAACGTCACAGCGGCCGGATTTACCGGCCCGAAAAGAGAAG--AAAAAAGAAGAGAGGTGGGAATCCAGCCGGAGC
AAAGACGAGTCAAAGCGGGAGCTCCCCAGCGGAAAGAAG---GAAAGAAAGAAAAGGAAAGCAATCGCGTTCTCCACGTG
GCCAGCGCGCCCAGTCCTCTCCAAGCACCCATC-CCCTCACCTCACCTAAAC-CCCCCGCAAC-----CTTAACCCATCC
CCACCGCCAGCCCCCAGC-CGTGTCCCCAACCCCAAATCCTCAGATCCGCCTCCGCTCC----------------CCCGA
GCCCAAGTCCACCCCTCCCT------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------CCCCACCGCGGCGCGCACGCACGCACCCGGCCACCACCCACCCGGATCCAGATCCGCGCGGCGGC
GGCGCAGGTCA-------------GCAGGAGGGAGCGATGGCCGGCGGCGGGGGCGCCGGCGGCTTGTCGGAGTCGGTGA
TGCGGAAGGTGCTGCTGTCCTACTGCTACGTGGCGGTGTGGATCTTCCTCTCCTTCGCCGTCATCGTCTACAACAAGTAC
ATCCTCGACCCCAAGATGTACAACTGGCCCTTCCCCATCTCGCTCACCATGGTGCACATGAGCTTCTGCTCCTCGCTCGC
CGTCGGGCTCGTCCGCGTCCTGCGCGTCGTCGAGCCGCCCTCCTCCCCGCCCATGACGCCGCAGCTCTACACCTCCTCCG
TCGTGCCCATCGGCGCGCTCTACGCCATGTCGCTCTGGTTCTCCAACTCGGCATACATCTACCTCTCCGTCTCCTTCATC
CAGATGCTCAAGGCGCTCATGCCCGTCGCCGTCTACTCCATCGGCGTCCTCTTCAAGAAGGAGACCTTCCGCTCCTCCTC
CATGCTCAACATGCTCTCCATCTCCTTCGGCGTCGCCATCGCCGCCTACGGCGAGGCCAGGTTCGACCTCCGCGGCGTCG
CGCTCCAGCTCGCCGCCGTCGCCTTCGAGGCCACCCGCCTCGTCCTCATCCAGATCCTGCTCACCTCCAAGGGCATCTCG
CTCAACCCCATCACCTCGCTCTACTACGTCGCGCCCTGCTGCCTCTGCTTCCTGCTCGTGCCCTGGATCTTCGTCGAGCT
GCCCAGGCTGCG---------CGCCGTCGGCACCTTCCAGCCCGACTTCTTCATCTTCGGCACAAACTCGCTCTGCGCCT
TTGCGCTCAACCTTGCGGTGTTCCTGCTCGTCGGCAAGACCTCCGCGCTCACCATGAATGTTGCGGGAGTGGTCAAGGAC
TGGCTGTTGATTGCCTTCTCCTGGTCCGTGATCCGGGACACGGTCACCCCCATCAACCTCTTCGGCTACGGCATCGCCTT
CCTAGGGGTTGGCTACTACAACCATATCAAGCTGCAGGCGCTCAAGGCCAAGGAGGCGCAGAAGAAGTCCGCGCAGGCCG
ATGAGGAGGCTGGCTCCCTGTTGCAGGAGCGCGATAGCCA---CAGTGATCGCAAGAGCGAGAACCAGGCATAGAGCTCC
AGATCAGATCCGGGCATGCCCACATTGGTTGGTTCTAAAATCCATTTGTGTGATTTTTCTTTTTCAACTGCATGCACAAT
AGGCTTGTTATTTTTCCTGATTTGCCATGGTAGAGGAAT-AAAATTGGAGAAATGTATGATTCATTGGCAGTATGAAAAT
CGCGATGTACTTTGCCCACTTAC-------GTTTAAGTAGTAAAATTGTAAAGATCAATGGGGATGATGCTTTTGCACAA
TTAAGTTGCTGTCCTTCTACTTTTTATGGTGTGGACTATCATATAGATC--------TACATGCTTTCTGTCAGAATAAG
TAATGTTTTCATAGATAGAAACATGAAAGTACTCGAAACTGTGATCGTTTGCTCACTATGCATCTTCCTTATCCTAATTA
TGATGTGTGCTGGACAGGGAATCTGGTGCAAAGTGCAAAGACTATAGTTTGGTCTACAGTTGCTTTCAAGGAGGTGGATG
CCGGTTCTGGTTTATCTTTTTAACTTTAGTTGGATCTGAGGAGCAAACCAAGGCAATTTGTTGATCTAGGAAATACTTGC
ATTTGAACCTGTTTCTGGAGGGTTAGAAGGAACACTTATATTACCCTGTTATTTATTTTTGCGTTTTTGTTCTGAAAGGC
GGCCTTGCTTCCTCTCTCGCTCATTCCATATTTATTTGGTCGAGTAGCCTAGGTAAAAATGTACTGCACATTGGTATCAT
TTCGGTGGGTATCATCTGGTGGTTATCATCTATATATAATGAGCTTACTGTAAACTATATTCAATACTTGCCTCTTTTAG
CTTTTAATATCGTGTGATTATGTGTCGGTTTGTTGCATCGGTGGGTGAATATTTGCCTTGCCAACTTTCACCTGATCAA-
-----------------------------------------------------------------TTTGTCACTAGATGG
GGTAACTAGGTGGTTGCTGAAGTTGCATTGTCATGTATTCAGGTATGAGAACCATG
>chr1A_290
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------AGGCAAGCTCTTAAGTCGGTCAACCCGCTTA
TTTTCT---TTCTTTCAGTGTTTTTGCGTGTCAATAGGTGAAACTTCGTGCCACGAGACGGTGAAAATCGATGTAAGAAC
CATGCCATTGCCACCCCATGACACCAACTATTTTCTGATTTTTTTTACCACAACCT-----------------ATCCATG
-TCACACACGCGGCTCATTGACCATGTCACTCAACGGTAGGTGATGTAACTTGGATACGTATTTTCGCAGGGAAAAAGAG
GCGCTGGAGGCGTAGAAACGCGCCACCCACACATGGAGTTACCCATGACAGTACAAAACGGTGGCACTTTTTAAACCACC
GCGTCAACGTCACAGCGGCCGGATTTACCGGCCCGAAAAGAGAAGAAAAAAAGAAAGAGAGGTGGGAATCCAGCCGGAGC
AAAGACGAGTCAAAGCGGGAGCTCCCCAGCGGAAGAAAGAGAGAAAGAAAGAAAAGGAAAGCAATCGCATTCTCCACGTG
GCCAGCGCGCCCAGTCCAAGCACCCATCCCCTC-CCCTCCCCTCACCTAAAC-CCCCCGCAACTCAACCTTAACCCACCC
CCACCGCCAGCCCCAGCC-CGTGTCCCTCCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNCCCCACCGCGGCGCGCACGCACGCACCCGGCCACCGCCCACCCGGATCCAGATCCGCGCGGCGGC
GGCGGCGCAGGCGAAGGCGAAGGCGAAGGAGGGAGCGATGGCCGGCGGCGGGGGCGCCGGCGGCTTGTCGGAGTCGGTGA
TGCGGAAGGTGCTGCTGTCCTACTGCTACGTGGCGGTGTGGATCTTCCTCTCCTTCGCCGTCATCGTCTACAACAAGTAC
ATCCTCGACCCCAAGATGTACAACTGGCCCTTCCCCATCTCGCTCACCATGGTGCACATGAGCTTCTGCTCCTCGCTCGC
CGTGGGGCTCGTCCGCGTCCTGCGGGTCGTCGAGCCGCCCTCCTCCCCGCCCATGACGCCGCAGCTCTACACCTCCTCCG
TCGTGCCCATCGGCGCGCTCTACGCCATGTCGCTCTGGTTCTCCAACTCGGCCTACATCTACCTCTCCGTCTCCTTCATC
CAGATGCTCAAGGCGCTCATGCCCGTCGCCGTCTACTCCATCGGCGTCCTCTTCAAGAAGGAGACCTTCCGCTCCTCCTC
CATGCTCAACATGCTCTCCATCTCCTTCGGCGTCGCCATCGCCGCCTACGGCGAGGCCAGGTTCGACCTCCGCGGCGTCG
CGCTCCAGCTCGCCGCCGTCGCCTTCGAGGCCACCCGCCTCGTGCTCATCCAGATCCTGCTCACCTCCAAGGGCATCTCG
CTCAACCCCATCACCTCGCTCTACTACGTCGCGCCCTGCTGCCTCTGCTTCCTGCTCGTGCCCTGGATCTTCGTCGAGCT
GCCCAGGCTGCG---------CGCCGTCGGCACCTTCCAGCCCGACTTCTTCATCTTCGGCACAAACTCGCTCTGCGCCT
TTGCGCTCAACCTTGCGGTCTTCCTGCTCGTTGGCAAGACCTCCGCGCTCACCATGAATGTCGCGGGAGTGGTCAAGGAC
TGGCTCTTGATTGCCTTCTCCTGGTCCGTGATCCGGGACACGGTCACCCCCATCAACCTCTTCGGCTACGGCATCGCCTT
CTTGGGTGTTGGCTACTACAACCATATCAAGCTGCAGGCGCTCAAGGCAAAGGAGGCGCAGAAGAAGTCCGCGCAGGCCG
ATGAGGAGGCTGGCTCCCTGTTGCAGGAGCGCGATAGCCA---CAGTGATCGCAAGAGCGAGAACCAGGCATAGAGCTCC
AGATCGGATCCGGGCATGCCCACATTGGTTGGTTCTAAAATCCATTTGAGTGATCTTTCGTTTTCTACTGCATGCAGGCT
AGGCTTGTTATTTTTCTTGATTTGCCATGGTAGAGGAATAAAAATCGAAGAAATGTATGATTCATTGGCAGTATGAAAAT
CGCGATGTACTTTGCCCACTC-------TTGTTTAAGTAGTTAAATTGTAAAGATCAATGGG---GATGCTTTTGCACAA
TTAAGTTGCTGTCCTTCTACTTTTCATGGTGTAGACTATCATATCATATAGATCTGGTACATGCTTTCTGTCAGAATAAG
TAATGTTTTCATAGATAGAAACATGAAAGTACTCGAAATTGTGATCGTTTGCTCACTATGCATCTTCCTTATCCTAATTA
TGATGTGTGCTGGACAGGGAATCTGGTGCAAAGTGCAAAGACTATAGTTTGGTCTACAGTTGCTTTCAAGGAGGTGGATG
CCGGTTCTGGTTTATCTTTTTAACTTTAGTTGGATCTGAGGAGCAAACCAAGGCAATTTGTTGATCTAGGAAATACTTGC
ATTTGAACCTCCTTCTGGAGGGTTAGAAGGAACACTTATATTACCCTGTTATTTATTTTTGCGTTTTTGTT---------
------------TCTCTCGCGCATTCCGTATTTATTTGTTCCAGTAGCCTAGGTAAAAATGTACTGCACATTGGTATCAT
TTCGGTGGGTATCATCTGGTGGTTATCATCTATATATAATGAGCTTACTGTAAACTATATTCAATAGTTGCCTCTTTTAG
CTTTTCATATTGTGTGATTATGCATCGTTTTGTTGCATGGTTGGGTGAATATTTGCCTGATCAATTTTCACCTGGCGACG
TATTGCTAAGATTCTTTTACATGTTATAAAGATAACACTATAATCAGTTCTAGTATATGGTTTGTTTTGTCACTAGGTGC
GGTAACTTAA-----------GTTGCATTGTCATGTA-------------------
>chr3D_1020
--------------------------------------------------------------------------------
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-----------------------------------------------------------------TGTCGGAGTCGGTGC
TGCGCAAGGTGCTCGTCTCCTACTGCTACGTCGCGGTGTGGATCTTCCTCTCCTTCACCGTCATCGTCTACAACAAGTAC
ATCCTCGACCCCAAGATGTACAACTGGCCCTTCCCCATCTCGCTCACCATGGTGCACATGGCCTTCTGCTCCTCCCTCGC
CGTCGCGCTCGTCCGCGTCTTCCGGGTCGTCGACCTCCCGTCCTCGCCCGCCATGACCACGCAGCTCTACACCAGCTCCG
TCCTCCCCATCGGCGCGCTCTACTCGCTCTCCCTCTGGTTCTCCAACTCCGCCTACATCTACCTCTCCGTCTCCTTCATC
CAGATGCTCAAGGCGCTCATGCCCGTCGCCGTCTACTCCATCGGGGTGCTCTTCAAGAAGGAGACCTTCCGCTCCTCCGC
CATGCTCAACATGCTCTCCATCTCCTTCGGCGTCGCCATCGCCGCCTACGGCGAGGCCCGCTTCGACCTCCGCGGGGTCG
CGCTCCAGCTAGCCGCCGTCGCCTTCGAGGCCACCAGGCTCGTCCTCATCCAGATCCTCCTCACCTCCAAGGGGATCTCG
CTCAACCCCATCACCTCGCTCTACTACGTCGCGCCCTGCTGCCTGGGGTTCCTCTTCCTGCCCTGGGTCTTCGTCGAGCT
GCCCAGGCTGCG---------CGCCGTCGGCATGTTCGAGCCCGACTTCTTCGTCTTCGGCACCAACTCCCTCTGCGCCT
TCGCGCTCAACCTGGCCGTCTTCCTGCTCGTCGGCAAGACGTCGGCGCTCACCATGAACGTGGCCGGCGTGGTCAAGGAC
TGGCTGCTCATCGCCTTCTCCTGGTCCGTGATCCGGGACACGGTGACCCCGATCAACCTCTTCGGCTACGGGATCGCCTT
CCTGGGCGTGGGCTACTACAACCACGTGAAGCTGCAGGCGCTCAAGGCCAAGGAGGCGCAGAAGAAGGTGGCGCAGGCGG
ACGAGGAGGCCGGCTCGCTGCTGCAGGAGCGCGACTC--ACGGCGGCGAGCGCAAGACCGAGACCCAGTCAT--------
--------------------------------------------------------------------------------
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--------------------------------------------------------
>chr3B_1020
--------------------------------------------------------------------------------
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-----------------------------------------------------------------TGTCGGAGTCGGTGC
TCCGCAAGGTGCTCGTCTCCTACTGCTACGTCGCGGTGTGGATCTTCCTCTCCTTCACCGTCATCGTCTACAACAAGTAC
ATCCTCGACCCCAAGATGTACAACTGGCCCTTCCCCATCTCGCTCACCATGGTGCACATGGCCTTCTGCTCCTCGCTCGC
CGTCGCGCTCGTCCGCGTCTTCCGGGTCGTCGACCTCCCCTCCTCGCCCGCCATGACCACACAGCTCTACACCAGCTCCG
TCCTCCCCATCGGCGCGCTCTACTCGCTCTCCCTCTGGTTCTCCAACTCCGCCTACATCTACCTCTCCGTCTCCTTCATC
CAGATGCTCAAGGCGCTCATGCCCGTCGCCGTCTACTCCATAGGGGTGCTCTTCAAGAAGGAGACCTTCCGCTCCTCTGC
CATGCTCAACATGCTCTCCATCTCCTTCGGCGTCGCCATCGCCGCCTACGGCGAGGCCCGCTTCGACCTCCGCGGCGTCG
CGCTCCAGCTCGCCGCCGTCGCCTTCGAGGCCACCAGGCTCGTCCTCATCCAGATCCTCCTCACCTCCAAGGGGATCTCG
CTCAACCCCATCACCTCGCTCTACTACGTCGCGCCCTGCTGCCTCGGCTTCCTCTTCCTGCCCTGGGTCTTCGTCGAGCT
GCCCAGGCTGCG---------CGCCGTGGGCATGTTCGAGCCTGACTTCTTCGTCTTCGGCACCAACTCCCTCTGCGCAT
TCGCGCTCAACCTGGCCGTCTTCCTGCTCGTGGGCAAGACGTCGGCGCTCACCATGAACGTCGCCGGCGTTGTCAAGGAC
TGGCTGCTCATCGCCTTCTCCTGGTCCGTGATCCGGGACACGGTGACCCCGATCAACCTCTTCGGCTACGGGATCGCCTT
CCTGGGCGTGGGCTACTACAACCACGTGAAGCTGCAGGCGCTCAAGGCCAAGGAGGCGCAGAAGAAGGTGGCGCAGGCGG
ACGAGGAAGCCGGCTCGCTGCTGCAGGAGCGCGACTCTCA---CGGCGAGCGCAAGACCGAGACCCAGTCATAGAGCTGC
TCATCTGATCCG--------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------
>chr3A_1020
--------------------------------------------------------------------------------
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-----------------------------------------------------------------TGTCGGAGTCGGTGC
TCCGCAAGGTGCTCGTCTCCTACTGCTACGTCGCGGTGTGGATCTTCCTCTCCTTCACCGTCATCGTCTACAACAAGTAC
ATCCTCGACCCCAAGATGTACAACTGGCCCTTCCCCATCTCGCTCACCATGGTGCACATGGCCTTCTGCTCCTCCCTCGC
CGTCGCGCTCGTCCGCGTCTTCCGGGTCGTCGACCTCCCGTCCTCACCCGCCATGACCACGCAGCTCTACACCAGCTCCG
TCCTCCCCATCGGCGCGCTCTACTCGCTCTCCCTCTGGTTCTCCAACTCCGCCTACATCTACCTCTCCGTCTCCTTCATC
CAGATGCTCAAGGCGCTCATGCCCGTCGCCGTCTACTCCATCGGGGTGCTCTTCAAGAAGGAGACCTTCCGCTCCTCCGC
CATGCTCAACATGCTCTCCATCTCCTTCGGCGTCGCCATCGCCGCCTACGGCGAGGCCCGCTTCGACCTCCGCGGCGTCG
CGCTCCAGCTCGCCGCCGTCGCCTTCGAGGCCACCAGGCTTGTCCTCATCCAGATCCTCCTCACCTCCAAGGGGATCTCG
CTCAACCCCATCACCTCGCTCTACTACGTCGCGCCCTGCTGCCTGGGGTTCCTCTTCCTGCCCTGGGTCTTCGTCGAGCT
GCCCAGGCTGCG---------CGCCGTGGGCATGTTCGAGCCCGACTTCTTCGTCTTCGGCACCAACTCCCTCTGCGCCT
TCGCGCTCAACCTGGCCGTCTTCCTGCTCGTGGGCAAGACGTCGGCGCTCACCATGAACGTGGCCGGCGTGGTCAAGGAC
TGGCTGCTCATCGCCTTCTCCTGGTCCGTGATCCGGGACACGGTGACCCCGATCAACCTCTTCGGCTACGGGATCGCCTT
CCTGGGCGTGGGCTACTACAACCACGTGAAGCTGCAGGCGCTCAAGGCCAAGGAGGCGCAGAAGAAGGTGGCGCAGGCGG
ACGAGGAGGCCGGCTCGCTGCTGCAGGAGCGCGACTCTCACGGCGGCGAGCGCAAGACCGAGACCCAGTCAT--------
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--------------------------------------------------------
>chr5D_1028
--------------------------------------------------------------------------------
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-------------------------------------------------------------------------TCGGTGC
TGAGGTCCGTGCTGCTGTCGTACGCGTACGTGGCGGTGTGGATCAGCCTGAGCTTCACGGTGATCGTCTACAACAAGTAC
ATCCTCGACCCAAAGATGTACGACTGGCCCTTCCCCATCTCGCTCACCATGATCCACATGGCCTTCTGCGCCTCCCTCGC
CGCCGCGCTCGTCCGCGTCTTCCGCTTCGTCGACCTCCCCGTCGACCCGCCCATGACGCCCTCGCTCTACGTCGCCACCG
TCGTCCCCATCGGCGCGCTCTACGCGCTCTCCCTCTGGTTCTCCAACTCCGCCTACATCTACCTCTCCGTCTCCTTCATC
CAGATGCTCAAGGCGCTCATGCCCGTCGCCGTCTACTCCCTCGCCATCGCCTTCCGCACCGAGACCTTCCGCAGGGCCTC
CATGCTCAACATGCTCGGCATCTCCGCGGGGGTCGCCGTCGCGGCCTTCGGGGAGGCGCGCTTCGACGTCTTCGGCGTCA
CTCTCCAGCTCGCCGCCGTCGCCGCCGAGGCCACGCGCCTCGTGCTCATCCAGATACTGCTCACCTCCAGGGGCATCAAG
CTCAACCCCATCACCTCGCTCTACTACATCGCCCCCTGCTGCCTGCTCTTCCTCACCGTGCCGTGGACGTTCGTCGAGCT
GCCGAGGCTGCAGGCGGCGTCCGCGGCCGGGATCGTCCGGCCAGACGTGGTCGTTTTCGGGACCAATTCGCTGTGCGCCT
TCGCGCTGAACCTGGCGGTGTTCCTGCTGGTGGGGAAGACGTCGGCGCTGACCATGAACGTGGCAGGGGTGGTCAAGGAC
TGGCTGCTCATCGCCTTCTCATGGTCGGTCATCCAGGACACCGTGACACCGGTGAACCTCGCCGGCTACGCCATTGCCTT
CCTTGGCGTCGCCTACTACAACCACGCCAAGTTGCAGGCGCTCAAGGCAAAGGAGGCCGAGAGGAAG-------------
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--------------------------------------------------------
>chr5A_1043
--------------------------------------------------------------------------------
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--------GTGCTGCTGTCCTACGCGTACGTGGCCGTGTGGATCAGCCTCAGCTTCACGGTGATCGTGTACAACAAGTAC
ATCCTCGACCCCAAGATGTACGACTGGCCCTTCCCCATCTCGCTCACCATGATCCACATGGCCTTCTGCGCCTCCCTCGC
CGCCGCGCTCGTCCGCGTCTTCCGCCTCGTCGACCTCCCCGCCGACCCGCCCATGACGCCCTCGCTCTACGTCGCCACCG
TCGTCCCCATCGGCGCGCTCTACGCGCTCTCCCTCTGGTTCTCCAACTCCGCCTACATCTACCTCTCCGTCTCCTTCATC
CAGATGCTCAAGGCGCTCATGCCCGTCGCCGTCTACTCCCTCGCCATCGCCTTCCGAACCGAGACCTTCCGCAGGGCCTC
CATGCTCAACATGCTCGGCATCTCCGCGGGGGTCGCCGTCGCGGCCTTCGGGGAGGCGCGCTTCGACGTCTTCGGCGTCA
CGCTCCAGCTCGCCGCCGTCGCCGCCGAGGCCACGCGCCTCGTGCTCATCCAGATACTGCTCACCTCCAGGGGCATCAAG
CTCAACCCCATCACCTCGCTCTACTACATCGCCCCCTGCTGCCTGCTCTTCCTCACCGTGCCGTGGACGTTCGTCGAGCT
GCCGAGGCTGCAGGCGGCGTCCGCGGCCGGGATCGTCCGGCCAGACGTGGTCGTTTTCGGGACCAATTCGCTGTGCGCCT
TCGCGCTGAACCTGGCGGTGTTCCTGCTGGTGGGGAAGACGTCGGCGCTGACCATGAACGTGGCAGGGGTGGTCAAGGAC
TGGCTGCTCATCGCCTTCTCATGGTCGGTCATCCAGGACACCGTGACACCAGTGAACCTCGCCGGCTACGCCATTGCCTT
CCTTGGCGTCGCCTACTACAACCACGCCAAGTTGCAGGCGCTCAAGGCAAAGGAGGCCGAGAGGAAG-------------
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--------------------------------------------------------------------------------
--------------------------------------------------------
>chr5B_1043
--------------------------------------------------------------------------------
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--------GTGCTGCTGTCCTACGCGTACGTGGCCGTGTGGATCAGCCTCAGCTTCACGGTGATCGTGTACAACAAGTAC
ATCCTCGACCCCAAGATGTACGACTGGCCCTTCCCCATCTCGCTCACCATGATCCACATGGCCTTCTGCGCCTCCCTCGC
CGCCGCGCTCGTCCGCGTCTTCCGCTTCGTCGACCTCCCCGCCGACCCGCCCATGACGCCCTCGCTCTACGTCGCCACCG
TCGTCCCCATCGGCGCGCTCTACGCGCTCTCCCTCTGGTTCTCCAACTCCGCCTACATCTACCTCTCCGTCTCCTTCATC
CAGATGCTCAAGGCGCTCATGCCCGTCGCCGTCTACTCCCTCGCCATCGCCTTCCGCACCGAGACCTTCCGCAGGGCCTC
CATGCTCAACATGCTCGGCATCTCCGCGGGGGTCGCCGTGGCGGCCTTCGGGGAGGCGCGCTTCGACGTCTTCGGCGTCA
CGCTCCAGCTCGCCGCCGTCGCCGCCGAGGCCACGCGCCTCGTGCTCATCCAGATACTGCTCACCTCCAGGGGCATCAAG
CTCAACCCCATCACCTCGCTCTACTACATCGCCCCCTGCTGCCTTCTCTTCCTCACCGTGCCGTGGACGTTCGTCGAGCT
GCCGAGGCTGCAGGCGGCGGCCGCGGCCGGGATCGTCCGGCCAGACGTGTTCGTTTTCGGGACCAATTCGCTGTGCGCCT
TCGCGCTGAACCTGGCGGTGTTCCTGCTGGTGGGGAAGACGTCGGCGCTGACCATGAACGTGGCAGGGGTGGTCAAGGAC
TGGCTGCTCATCGCCTTCTCATGGTCGGTCATCCAGGACACCGTGACACCGGTGAACCTCGCCGGCTACGCCATTGCCTT
CCTTGGCGTCGCCTACTACAACCACGCCAAGTTGCAGGCGCTAAAGGCAAAGGAGGCCGAGAGGAAG-------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------
>SNPs
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS---S-S-------------------S-----
S-----------S-----------------S---S-------S---------------SS--------------------
--------------S----------------S-SS-SS----------S--S-SSSSSSSSSSSSSSSSSSSS-------
--S-----S--------------S-------------------S------------------------------------
------------------------------------------------------------SS----------------S-
--------------------------------------------------------------------------------
---------------------------S----------------------------------S--S-S------------
---------------------------------S-----S------------S---------------------------
------------------S----------S-----------------------------SSSSSSSSSSSSSSSS-----
-S------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------------------S-------
-------------SS----SS--------S------S------------------S------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------S-------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------------------------S-S--S-----
------------------------------------------------------------------------S-------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------S-------------------------------------------------S---------
---------------------SSSSSSS-----S----------------------------------------S-----
-------------S-----------------S------------------------------------------------
--------------------------S---------------S--S----------------------------------
--------------------------------------------------------------------------------
-------------------------------------------S------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------S-----
-----------S-----------S------------------S--------------------S------------S---
-------------------------------S---------S--------------------------------------
----------SSS-------------------------------------------
>forward_415
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------------------------------AGAAC
CATGCCATTGCCACT-----------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------
>reverse_1752
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------------------------GTCATCCTC
CATGCTCAACA---------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------
>forward_524
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------GTGTCACTCAACGGTAGGTGT------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------
>reverse_2766
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------TGTTTGCTCACTATGCATCTTCC------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------
