>input_sequence_62009
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---------------------------------------------ATGAGCGGAGGACGCGTCCTTCACCGGAGGTCTCC
TGCCCCTCTCGTTCTGGCCTTGGCATGGGCCATGCTCTTCGTCGCATTGTCTGACGCGCAGCTGGAGGTCGGGTTCTACG
ACTACACCTGCCCGAGAGCGGAGCAGCTCGTCCGCACCGTCGTCCACGCCGCCATCCGCCGTGACCCCGGCATCGGCGCC
GGGCTAGTGCGCCTCTTCTTCCACGACTGCTTCGTCAGGGTCAGCTTCTTTCTGTTCTATCCGTCTTGTAT-GTTCCGTG
TCAACAACTTAATCCCAACGTTAGT--------------GTGCACT-------------------GTACAGGGGTGTGAT
GCATCCGTGCTCCTGGACGCGGT---------CCCGGGCAGCGACGACGCCGTGGAGAAGGCGTCGCAGGCGAACAGCCC
TAGCCTCAGGGGCTACGGCGTCATCGAGCGCGCCAAGCGCGTGGTCGAGCGGCGGTGCCGGCGC--------------CG
ACATCGTGGCCTTCGCCGCGCGCGACGCCAGCGGCCTCCTGGGGGGCATCGAGTACGAGGTGCCGGCGGGGCGGCGCGAC
GGCCGCGTCTCCAACGCGTCGGAGGTGCTCAACAGCCTGCCCCCGCCCTTCTCCAACGCCTCGCGGTTCGTCGACAGCTT
CGCCGCCAAGGGCCTCAATGCCGACGACATGGTCACGCTCTCGGGCGCGCACTCCTTCGGCCGCACCCACTGCTCAGCCA
TCGCCTTCCGGCTCTACCCGCGGGTCGCAGCAGACATGAACGCCACCTACGGCAGGTCCCTCCGGGCGCG---GTGCCCG
GCCGCGACGGGGCGCCGGGACCGGGTGGTGCACCTGGACCCGGTCACGGGGCTCCGGCTCGACAACCAGTACTACAGGAA
CGTGCAGACGCGCGAGGTGCCGTTCACGTCGGACGCGACGCTCCTGACGCGGGACGACACGGCGGCGCTCGTCGACCTCT
ACGCGCGCAACAGGACTGCGTGGATGTCGCGGTTCGCGGCCGCGATGGTGAAGATGGGCGACCTCGACGTGCTCACCGGC
ACCCAAGGAGAGATCAGGAGCCTTTGCAACAGAGTTAACTAG--------------------------------------
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>chr6B_1_TraesCS6B01G109000
CCTAAAAAATACCCTAA--AAGCTTGTTGCTTACCACCAAGTTGTTGTACCATTGATGTAGCATGTGGCGTCTCGGAAAG
AACCTCTTCATTGATGTCTCAAAGAACGTAGCTAGCCAGTTGATGCTGGTGAACCCGAAAAACCTCACTGCGAGAGGAGT
ACATAATCGGGGAAGGGCCTCAT---------------------GGCTTCCTCCCATGCTAGCAAGGAAGGAGGGACGAA
TGGATGAGAGAGTGGGGTGTGGTGATGGAGATTGGGGATTGTGAGAGTGATAGTCCGGAGCAGTACGTGTGTGCCTCCAA
GAATTTTCTCACAGGCAAAAGAGACAGCTCCCACAATACACATAGTTTTTTTAGTGAAAAAGATTCAGATTCATAATAAA
AGTTTACAAGGAATACAAAACACTTCAAACACAATA-AAAATTACATTGAGGTCTCTAGACTTTTGTATGACCACC---G
CCGTTAGAGCCCTTGAATAGATCTAATGACCATCGATGCGACTGTTCTTCTTGAGCCTCCTTCCTGGTGGGTTGAACACC
ATGACACTTTCATCTCTGCACGTTTCGATTCACGGCTCCCTGC-------------------------------------
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--CCCCACGACGAAGCATGGAGGG------GAAGTTTGCCCTTTCCGCCAAAG--GGGAAAACACGTCCATTTCGTCCAA
AGGCTGACCTACCCAACGGTAGCCTGCAGGGCAGTAGATAGTGCAGTAAACGTGGCACAAATGTCAATGGCGCAACGACT
AG---------TAGTAATACAGTACAGTGATGTCAGTTTGACCCGACAAACTGCGCGGAACACTAGCACTAGAAGAGCTC
GCAGCAACAGATATGCAAATAAACTTA-----------------------------------------------------
----------CCGGAGGTCAACTCTGATCA--------CTTCATGCACATC---TACCAG--------TTCAGTGCTCCG
GTTCACCCCGCTGCCGTTGGTCTCGAGACCAGTCGACGCGTATAAATTACCGCCATGGCCACACTCTCCTCTATTCCTAT
TCGAGCTCACAGAAATCAAAAGATCGAACACGGAGTCTCACAGATATGAGCGGAGGACGCGTCCTTCACCGGAGGTCTCC
TGCCCCTCTCGTTCTGGCCTTGGCATGGGCCATGCTCTTCGTCGCATTGTCTGACGCGCAGCTGGAGGTCGGGTTCTACG
ACTACACCTGCCCGAGAGCGGAGCAGCTCGTCCGCACCGTCGTCCACGCCGCCATCCGCCGTGACCCCGGCATCGGCGCC
GGGCTAGTGCGCCTCTTCTTCCACGACTGCTTCGTCAGGGTCAGCTTCTTTCTGTTCTATCCGTCTTGTAT-GTTCCGTG
TCAACAACTTAATCCCAACGTTAGT--------------GTGCACT-------------------GTACAGGGGTGTGAT
GCATCCGTGCTCCTGGACGCGGT---------CCCGGGCAGCGACGACGCCGTGGAGAAGGCGTCGCAGGCGAACAGCCC
TAGCCTCAGGGGCTACGGCGTCATCGAGCGCGCCAAGCGCGTGGTCGAGCGGCGGTGCCGGCGC--------------CG
ACATCGTGGCCTTCGCCGCGCGCGACGCCAGCGGCCTCCTGGGGGGCATCGAGTACGAGGTGCCGGCGGGGCGGCGCGAC
GGCCGCGTCTCCAACGCGTCGGAGGTGCTCAACAGCCTGCCCCCGCCCTTCTCCAACGCCTCGCGGTTCGTCGACAGCTT
CGCCGCCAAGGGCCTCAATGCCGACGACATGGTCACGCTCTCGGGCGCGCACTCCTTCGGCCGCACCCACTGCTCAGCCA
TCGCCTTCCGGCTCTACCCGCGGGTCGCAGCAGACATGAACGCCACCTACGGCAGGTCCCTCCGGGCGCG---GTGCCCG
GCCGCGACGGGGCGCCGGGACCGGGTGGTGCACCTGGACCCGGTCACGGGGCTCCGGCTCGACAACCAGTACTACAGGAA
CGTGCAGACGCGCGAGGTGCCGTTCACGTCGGACGCGACGCTCCTGACGCGGGACGACACGGCGGCGCTCGTCGACCTCT
ACGCGCGCAACAGGACTGCGTGGATGTCGCGGTTCGCGGCCGCGATGGTGAAGATGGGCGACCTCGACGTGCTCACCGGC
ACCCAAGGAGAGATCAGGAGCCTTTGCAACAGAGTTAACTAG--------TGCATTCTAGTATCTGCTAGCTGCTGCTTC
GACGAATAGCGACCTGCTGCAACCGTGGAACTAAACTGCTAGTAGTTCATCAGCTACAAGATTTTTTTTCTGTTTACATA
TGTTTATTCAAACGATTCATTATAGTAATGCCTTTTGGTGC---------ATGGAGCTGTTATTTTGAATCTTTTTTAAA
AAATGTTCCAATTATTCAAAATACTGTA-AAAAAATCCACATTATTACGGATGTACTCCTTCCGCCTGAAAATATTTGCC
AGAGAAATTGATATATCTAGACGTAATTTAGTTCTAGATAAATTCATTTTTACTCATTTCCGTGACAGGTAATTCTGCAT
GGAGAGAGTAATATATATTAACAACAAAGTCCTCACAAGGATCTATTCCTCATCAATTGGGATTACAACCATGGATTGAC
AAAGTTCTAACCATTATAGGGAAGGAGAAGAACAACCGAGGAGGAACAGACAGAAACATGAGAGGCCGAAGCCGTA----
--------------------------------------------------------------------------------
---------------------------------------------------------AGTTCCTAACCAAGTTGTTCGTA
GAAATCTCATGTGTATTTGTAGTCCTCTCAAGGCCTCATTGCAGCCCAAGCCCAGCAGCACATGGCCCATCCTACGCGAG
AGTAGGTTGGTCGCTAACAGTATAGTGTGTATGTGCAAATTTTCATGATGAAATCCATTGACATATAGTAAAAGGAACAA
ATTGATGATTTTGAATAAAGTGAACCATATGTGGACTGTTCGCTATGTAAAACCAATGGGTTTCGCCATTTTGTGTTGCT
CATGAATCATTGTATTTTGAGCCCCGCTTTGGTACACCCCCCCCCCCTCACAAAACATATAAAGGGTAATATCGACCTTT
TGGCAAATCGTATCCACTTACATATGTATTGTACATACGTCAATCGAGTAGTAGGCTCCGTCCTGGGTTCGGCCCATTCA
CA------------------------------------------------------------------------------
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-------------------------------------------------------------------TTTTCTTCTTTTT
GCCCATTTGCATTTTCTTTTTTTTTTAGCCTCGAAAAGTACTGCACCATTTGGG--------------------------
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-------------------------------------ATTCAAACA-TGT------------------------------
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>chr6A_1
CCTAAAAAATACCCTATGGAAGCTTGTTGCTAACCACCAAGTTTTTGTACCATTGATGTAGCATTTGGCGTCTCGGAAAG
AACCTCTTCATTGATGTCTCAAAGAACGTAGCTAGCCAGTTG---CTGGTGAACCCGAAAAACCTCACTGCGAGAGGAGT
ACATAATCGAGGAAGGGCCTCAT---------------------CGCTTCCTCCCATGCTAGCAAGGAAGGAGGGACGAA
TGGATGAGGGAGTGGGGTGTGGTGATGGAGATTTGGGAGTGTGAGAGTGATAGTCCGGAGCAGTACCTGTGTGCCTCCAA
GGATTTTCTCACAAGCAAAAGAGACAACTCCCACAATATACAT-GTTTTTTTAGTGAAAAGC-TTCAGATTTGTAATAAA
AGTTCACAAGGAATACAAAACATCTCAAATACACAATAAAATTACATTGATGTCTATAGACTATTGTATGACCACTACTG
CCGTTAGAACCTTTGAATAGATCTAATGACCATCAAAGCGGCTGTACTTCTCGATCCTCCTTCCTGGTGGGTTGAGCACC
ATGGCACTTTCATCTCTGCAGGTTTCAATTCACGACTCGCTGCTGGATCTGGAGCAGACGGAGGTTTGGTGGTATAGGAT
GGGGACTGGAGGAACTTTGGTCGGCTGGTTCGGCCTGACATCGACGACGTCCCTCGACGCCGTTACCCTCTCTGAAGGCG
AAGTCGAGGTCCCTCCTATCCACCTTCGAACCCCTCCCGGACGAAAGTCCAAAATTCCGTCTGGATTGGGCGGCGGCGGC
GTCTTGCGCGTCGTACCCTTCATGGAGGCGCCGTCTTGGGAGGCTCAGGTGTTCGAGGAAGAGTTGCTGTGGGTGGTGGG
TTCCGCGTAGCTCCAGCATCGGCGACGGTGTGGAGGTTGGCAGGAGGAGCGGCGTTGTATCTACCGCGTCGATGACGACG
AGTATTGGCGGTATGGTGCAGTTAGATCTCGACGACGGATGTGTCTGATGGATGAGCGCAGGGCGGTGGTGCCGTTTGGT
ACCGTGACGGCGCCGCCGACAGGCCTAACAAAGTCGATGCATCAGTACATGCTCTGAAGATGGATCGGTGGAAGACTGTG
ACGACAACCTATATATGAGAGTGTGTCGGACCGATCTGTGCCCCAGACCCGGTATGTGGCTTGGATGGGGCCTCCGGATT
TAGATGTTAGGCTTACGTAAGAGGTCAGGGTATTCGGCTCAGTATTTCTGCATCCCTTCATCAAGTTGTTAGGAGTAGCG
ACACATGTTGCCAAGATAACGGATTCACATATATTGATGCAATACTTTGTAAGGCCTTTGTGAATAATTGATAAAATTAT
TGCATGCATCTCCCAAATACAGAGGCCAAGGGTCCTCCTTATTTTCTAAAGAAAAAAGAAAAGAAAGATGAGTCCATAGC
CTCCCCACGGTGAA----GTATGGTGGGAAAGAGTTTGCCCTATCCGC----GGAGGGAAAACACGTCCACTTCGTCCCA
AGGCTGATCTACCCAACGGTAGCCGGCAGGGCGGTAGATACTGCAGTAAACGTGGCACAACTGTCAATGGCGCAACGACT
AG---------TA----------------ATGTCAGTTTGACCCGACAAACTGCGCGGAACACTAGCACTAGAAGAGCTC
GCAGCA-CAGAAATGCAAATAAACAATGAGATT-ACAGCTTTGACTCACTGATTAGTGTAGCTTGTGGACGCCCTTCCAC
GCGAATCCAT----AGGTCAACTCTGTTCTTCTCGTCGCTCCATGCACATCTACTACCAG--------CTCAGTGCTCCG
GTTCACCCTGTTGCCGTTGGTCCCGGGAGA--TCGACGCGTATAAATAACCGCCATGGCCACACTGTCCTCTAT------
--GAGCTCACAGAAATCAAAACATCGAAC--------TCAGAGACATGAGCGGAGGACGCGTCCTTCACTGGGGATCTCC
TTCCCATCTCCTTCTGGCCTTGGCATGGGCAGTGCTTTTCGTCCCATTGTCTGACGCGCAGCTGGAGGTCGGGTTTTACG
ACTACACCTGCCCGAGAGCGGAGCAGCTCGTCCGCACCGTCGTCCGCGCCGCCATCCGCCGCGACCCCGGCATCGGCGCC
GGGCTCGTGCGCCTCTTCTTCCACGACTGCTTCGTCAGGGTCAGCATCTCTCTGGCTTATCCGTCATGTAT-ATTCGGTG
TCAAGAGCTTAATGCCAACGTTATCGCCCTGTTTTTTTGGTGCACT-------------------GTACAGGGGTGTGAT
GCGTCCGTGCTCCTGGACGCGGT---------CCCTGGCAGCGACGACGCCGTGGAGAAGGCGTCGCAGGCGAACAGCCC
GAGCCTCAGGGGCTACGGCGTCATCGAGCGCGCCAAGCGCGTGGTCGAGCGGCGGTGCCGGCGCACCGTATCCTGCGCCG
ACATCGTGGCCTTCGCCGCGCGCGACGCCAGCGGCCTCCTGGGGGGCATCGACTACGACGTGCCGGCGGGGCGGCGCGAC
GGCCGCGTCTCCAACGCGTCGGAGGTGCTCAACAGCCTGCCCCCGCCCTTCTCCAACGCCTCGCGTCTCGTCGACAGCTT
CGCCGCCAAGGGCCTCACGGCCGACGACATGGTCACGCTCTCCGGCGCGCACTCCTTCGGCCGCACCCACTGCTCCGCCA
TTGCCTTCCGGCTCTACCCGCTGGTCGCGGCGGACATGGACGCCGCCTACGGCAGGTCCCTCCGGACGCG---GTGCCCG
GCGGCGACGGGGCGCCGGGACCGGGTGGTGCACCTGGACCCGGTCACGGGGCTCCGGCTCGACAACCAGTACTACAGGAA
CGTGCAGACGCGCGAGGTGCCGTTCACGTCGGACGTGACGCTGCTGACGCGGGATGACACGGCGGCGCTCGTAGACCTCT
ACGCGCGCAACAGGACGGTGTGGATGTCGCGGTTCGCGGCCGCGATGGTGAAGATGGGCAACCTCGACGTGCTCACCGGC
ACCCAAGGAGAGATCAGGAGGTTTTGCAACAGAGTTAACTAG--------TGCATTCG---ATCT----GCAGCTGCTTC
GGTGAATAGTGACCTGCTGCAACCATGGAAGTAAACTGCTAGTAGTTCAT---CTACAATATTTTCATTCTATTTATATA
TATTTATTCAAACGATTCATTATAGTAATGCCTTTTGGTGCTCGGGCTCCATGGAGCTGTTAA----------TTCTAAA
AAATGTTTCAATTATTCAAAAATCTGAAGAAAAAATCCACATTATTACAAATGTACTCCCTCTGCCCAGAAATATTTGTC
AGAGAAATGGATGTATCTAGACATATTTTAATTCAAA--------------------------------TAATTCTGCAT
GGAGGGAGTAGTATATATTAACAACAAAGTCCTCACAAGGATCTATTCCTCATCGATTGGGATTACAACCATGGATTGAT
GAAGTTCTAACCATTATAGGGGAGGAGAAAAACAATATAGGAGGAAGAGACACAAACATAGGAGGCCGAAGCAGTGGCGT
GGAGCCAGGAAAATCCTATCAGGGCGGCCAAGTGCTCTTAAAACTGATTGGGAAGGGCCAACTAATTGAAAAGTTGATTT
TGAGCAGCAAATCTTCACTAATTGTACATTGTTCATTAGCAAAAATGCAGCAAATCCAGTTCCTAGCCAAGTTGTTCGTA
GAAATCCCTTGTGTATTTGTAGTCCTCTCGAGGCCTCATTGCAGCCCAAGCCTAGCAGCACATGTCCCATCCCAGGCGAG
AGTAGGTTGGTCGCTAACAGTATATTGTATGTGTGTAAATTTTCATGACGATATACAATATACGATATACTATATGTGTG
TAAATTTTCCTTATCAGTCGAGCGGGGTTGAGGCGCTCGAGGATGTGCTCTTGCTCGAGGCGGAGCGCATCCGTTTCTAG
CTCGGACCTCGGAGATCCTCATCACCTTAAACCCTAAATCCTAAACAAACAAAAAAGAAAAATGTATCAAAAAAAGAGAA
AGATGAAGTATGACTTGCCGCAACTCGCACTGCCCAAATGGTATCAAACTAAGGCTCAAAAGAGTGAAAAGCAGAAAAAG
ATAAGGCCTCACTTAAACAAAGGCACAGACTCATATCAGCCCAACTCAAATAAAAATTTAGGAAGCCTAAAAATGATTGA
AAACTACTCAAAGAAGAAAACGGGGGCGAAGCAGGGGAGCTCCTATTCCAGACCCACGTGCGAATATAGGTGTTGCCGCA
AGCTGGCGCACCCCACCCCACCCCCGCGTGTTTTGATCGTTGCCCTGTGGGTCGCCCCATTTAAAGGTAGTCGTGGGTGT
TGGGGCGCTGATTTTGGGAAGCTTCCAACTGTTTTTTTGTTTGTTTCAGGTCCATCTGCTTTATTTGTTTTTTTCTGTTT
TCCTATTTCTTTATTTTTTTCCTTTTCAAATGCGTGAACTTTTTTTGGGTTTTTAAAACTATTTTCATTCCCATTTTTTT
GCTAATCTTTGAATTTGCTTCCAAAATCGATGATTGTTTTTAAATTTCTGAACTTTTTCCAAAATCTATGAACATTTTTC
AAATTTCATGAATTTTTCATAAAATTTCAAGAAAGTTTCTTCTTAATTTCCATAAGTTTTTATTATTTTTTGCAAATTTT
AAAAAATATACGATTTTTTTCTTCAAATTTGATGAACTTTCTTCAAATTCGTGAACCATTTTTTTTCAAAATCTATGAAC
TGTTTTCAAAATTGATGAAATTTTTTCACCTACATGGACTTTTTTCAACATACATGAACTCGTTTCAAATTGCATGAACC
TCTTCTCATCTTCGTGATTTTTTTGCAAAATCTATGAATATTTTTTAAAAATCATTAACATTTTTTTTCTATATCTACGA
ACTTTTTTCAAATTTCATGATATTTTTCAATTTTTGAACATTCTTCATTTCATAATTTTTTGCAATCTCTGGACATTTTT
TAAATCAATTTTATTTTCATTTTTAAGAACAAAAAATTTAAAATGGTCTACAGTTGACCGGTCAACAGTTTTCAGCTCAA
TGGTTGACCGGCAAATGATTGACTGATCGGCTTTCTATCGAGCGAAACCGAGAGAGGTGCGACCCCTTTTGATCGAGAGT
TTTTGGGTCACAACCATGCGTAACTAGCCTGGAGCTGCGAGGAGCATTTTTGAAACCGAAGGCGCCAAAGAGGAACACTC
TTAACTCACACCCCTCGCTCGCCTAGGCGCGACTTTGGGCTGGCCCATGTGGGGGCAAGGTGCCCCTGATTTTTCCTTTC
TTTTTGTTTCCTTCTTGTTTTTTTTTGCTGCATTAGAAAATGTTCATGATTTCAAATAAAATCAATTTCGAAATCTTCAT
GAATTTAACTAGTGCTTACGATCTACTGCTGCTTCGACGAATAGCGACCTGCTGCAACTGTGGAAGTAAACTGCTAGTAG
TTTATCAGCTACAAGATTTTTTTATTTATATATGTTTATTCAAACAATTCATTATAGTACCTATATGCCTTATGGTGCTC
GGGGTCCATGGAGCTGTTACTTTTAGAAATTCAAAAAACGTTTTACTTATTCAAAATTCTGAAAAAAATCACATTATTAG
GGATGTA
>chrUn_1
CCTAAAAAATACTTTACGGAAGCTTGTTGCTTACCACCAAGTTGTTGTACCAATGATGTAGCATATGGCCTCTTGGAAAG
AACCTCTTCACTGCA----CAAAGATCATAGCTAGCCAGTTGATGCTGGCGTACCCGAAAAACCTCACTGTAAGAGGAGT
ACATGGTCGAGGAAGGGCCTCGCCGCCACTGTCTACCGCATAGCGGCTTCCTCCCATGCTAGCAAGGAAGGGGGGACGAA
TGGACGAGGGAGTGGGGTGTGGTGATGAAGATTGGGGAGTGTGAGAGTGATAGTCCGAAGCAGTATGTGCGTGTCTCTAA
GGATTTTCTCGTAGGCAAAAGAGACAACTCCCAGAATACACAT-GTTTTTTTAGTGAAAAAGATTCATCATGAATACACG
CGTGTGTCTACA--------------------------------------------------------------------
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------------------------------------------------CCAAAGTTCCGTCGATTATGTATAAATGGACA
AACTTAAAGAGGATCGGAGCCTGAAAACAAAATCAACAAAGGATCACAGCCATCTGCCCGAGCGCCGAGCCCGCAAGAAC
TAAAAAGACCTAACATAAGCTATTAGCCGGAGCAAAGGCACCGGGATTTTCCTCCACATCATCGGCCATTGGAGCGACAG
GAAGAGGGC-----------------------------------------------------------------------
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-----------------------------------------------------------------AGGTGAATCCATAGG
CTCCCCACGGCGAA----GGAGGG------AGAGTTTGCCCTATCCGCCGAAGGAGGGAAAACACGTCCACTTCGTCCCA
AGGTTGATCTACCCAACGGTAGCCGGCAGGGCAGTAGATACCACAGTAAACCTGGCGCACATGTCAATGGCGCAACGACT
AGTAATACAGCTA----------------ATGTCAGTTTGACCCGACAAACTGCGCGGAACACTAGCACTAGAAGAGCCC
GCAGCAACGGAAATGCAAATAAACAATGAGATTTACAGCTTTGACTCACCGATTA---TAGCTTGTCCACGCCCTTCCAT
GCGAATCCGCCCGGAGGTCAACTCGGATCTTCTCGTCACTCCACCCGCACCTACCAGTTCAGACTGTTCTTAGTGCTCCG
GTTCACCCCGTTGCCGTTGGTCCCAAGATCAATGGACGCATATAAATAACCACCATGGCCACACTCTCCTCTATACCTAT
TCGAGCTCACAGAAATCAAAGGATCGAAC--------TCAGAGAAATGAGCGGAGGACGCGTCCTTCACCGGGGATCTCC
TTCCCCTCTCCTTCTGGTCTTGGCATGGGGCGTGCTTTTCGTCGCAGTGTCTGAAGCGCAGCTGGAGGTCGGGTTCTACG
ACTACACCTGCCCGAGAGCGGAGCAGCTTGTCCGCACCGTCGTCCGCGCCGCCATCCGCCGCGACCCCGGCATCGGCGCC
GGGCTCGTGCGCCTCTTCTTCCACGACTGCTTCGTCAGGGTCAGCTTCTTTCCGGCATGTCCGTCTCATATAATTCCGTG
TCAACAACCTAATCCCAACGTTA----------------GTGCACT-------------------GCGCAGGGGTGTGAC
GCGTCCGTGCTCCTGGACGCAGT---------CCCTGGCAGCGACGACGCCGTGGAGAAGGCGTCGCAGGCGAACAGCCC
CAGCCTCAGGGGCTACGGCGTCATCGAGCGCGCCAAGCGCGTGGTCGAGCGGCGGTGCCGGCGCACCGTCTCCTGCGCTG
ACATCGTGGCCTTTGCGGCGCGCGATGCCAGCAGCGTCCTGGGGGGCATTGACTACGAGGTACCGGCGGGGCGGCGCGAC
GGCCGCGTCTCCAACGCGTCGGAGGTACTCAACAGCCTGCCCCCGCCCTTCTCCAACGCCTCGCGGCTCGTCGACAGCTT
CGCCGCCAAGGGCCTCACGGCCGACGACATGGTCACGCTCTCCGGCGCGCACTCGTTCGGCCGCACCCACTGCTCCGCCA
TCGCCTTCCGTCTCTACCCGCGGGTCGCGGCCGACATGGACGCCGCCTACGGCAGGTCCCTCCGGGCGCG---GTGCCCG
GCGGCGACGGGGCGCCGGGACCGGGTTGTGCACCTGGACCCGGTCACGGGGCTCCGGCTCGACAACCAGTACTACAGGAA
CGTGCAGACGCGCGCGGTGCCGTTCACGTCGGACGTGACGCTGATGACGCGGGATGACACGGCGGCGCTCGTCGACCTCT
ACGCGCGCAACAGGACGGCGTGGATGTCGCGGTTCGCGGCCGCGATGGTGAAGATGGGCGACCTCGACGTGCTCACTGGC
ACCCAAGGAGAGATCAGGAGCCTTTGCAACAGAGTTAACTAGCTAGTGCATGCATTCC---ATCTGCTAGTGGCTGCTTC
GACAAACAGCGACCTGCAACAACCGTGGAAGTAAACTGCTAGTAGTTCATCAGCCACAAGATTTTTCC------------
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----------------------TATTTATATATGTTCATTCAAACA-TTCATTATAGTA---------------------
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>chr1D_1088
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----------------------------------------------------GACGCGCAGCTCAAGGTCGGGTACTACG
ACGCGACGTGCCCCGACGCCGAGTCCCTCATCACCACCATCGTCCACGCCTCCGTCCGCATGGACGCCGGCAACGGCCCC
GGCCTCGTCCGCCTCTTCTTCCACGACTGCTTCGTCAGGGTACGTGCTGCGCTCCACCGGACGAGCTCATGTCATG----
-------CTTAATTACGGTGCTAAT--------------GTAGCTGC-----------TGCATTCGCTCAGGGCTGCGAC
GCGTCGGTGCTGCTGGACGACCCGACGGGCAGCCCGGGCAACCGGA---CGGTGGAGAAGACGGCGGCGCCCAACTTCCC
CAGCCTCCGGGGCTTCGGCGTCATCGACCGCGCCAAGCGCGTCGTGGAGCGCCGCTGCCCGGGCGTCGTCTCCTGCGCCG
ACATCGTCGCCTTCGCCGCCCGCGACGCCTCCCGCATCATGGGCGGCATAATCTTCGCCATGCCCTCCGGCCGCCTCGAC
GGCCGCGTCTCCAACGCCACCGAGGCGCTCGCCAACCTGCCCCCCGCCAACTTCAACCTCACCCAGCTCATCACCCGCTT
CGCGTCCAAGAACCTCACCGCCGACGAGATGGTCACGCTCTCCGGCGCCCACTCCATCGGCCGCTCCCACTGCTCCTCCT
TCTCCAGCCACCTCTACCCGCAGATCGACCCCACGCTCAACAACACGCTCGCCAAGGCCCTCCGCGCCGGCAAGTGCCCG
GCGGCGACGGGGCGGCTCGACCGCGTCGTGCAGCTGGACGCCAAGACGCCGCTCCAGCTCGACAACCAGTACTACAAGAA
CATCGGCACCAACGAGGTGCTCTTCAACTCCGACCAGGCGCTGCTCGACCGGAGCGACACGGCGGCGCTCGTCGGCCAGT
ACGCCGCCAACCGGAAGCTGTGGTCGCAGAAGTTCGCGGACGCCATGGTGAAGATGGGCTACGCCGACGTGCTCACCGGG
CCGCCCGGGGAGATCAGGAAGGTCTGCAGCAGAGTGAACTAG--------T-----------------------------
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>chr1B_1088
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----------------------------------------------------GACGCGCAGCTCAAGGTCGGGTACTACG
ACGCGACGTGCCCTGACGCAGAGAGCCTCATCACCACCATCGTCCACGCCTCCGTCCGCATGGACGCCGGCAACGGCCCC
GGCCTCGTCCGCCTCTTCTTCCACGACTGCTTCGTCAGGGTACGTGCTGCGCTCGACCGGACGAGC-----TCATG----
-------CTTAATTACGACGCTAAT--------------GTAGCTGCATTCCCATTGGTGCTTTCGTGCAGGGCTGCGAC
GCGTCGGTGCTGCTGGACGACCCGACGGGCAGCCCGGGCAACCGTA---CGGTGGAGAAGACGGCGGCGCCCAACTTCCC
CAGCCTCCGCGGCTTCGGCGTCATCGACCGCGCCAAGCGCGTCGTGGAGCGCCGCTGCCCGGGCGTCGTCTCCTGCGCCG
ACATCGTCGCCTTCGCCGCCCGCGACGCCTCCCGCATCATGGGCGGCATAGTCTTCGCCATGCCCTCCGGCCGCCTCGAC
GGCCGCGTCTCCAACGCCACCGAGGCGCTCGCCAACCTGCCCCCCGCCAACTTCAACCTCACCCAGCTCATCACCCGCTT
CGCGTCCAAGAACCTCACCGCCGACGAGATGGTCACGCTCTCCGGGGCCCACTCCATCGGCCGCTCCCACTGCTCCTCCT
TCTCCAGCCGCCTCTACCCGCAGATCGACCCGACGCTCAACAACACGCTCGCCAAGGCCCTCCGCGCCGGCAAGTGCCCG
GCGGCGACGGGGCGGCTCGACCGCGTCGTGCAGCTGGACGCCAAGACGCCGCTCCAGCTCGACAACCAGTACTACAAGAA
CATCGGCACCAACGAGGTGCTCTTCAACTCCGACCAGGCGCTGCTCGACCGGAGCGACACGGCGGCGCTCGTCGGCCAGT
ACGCCGCCAACCGGAAGCTGTGGTCGCAGAAGTTCGCGGACGCCATGGTGAAGATGGGCTACGCCGACGTGCTCACGGGG
CCGCCCGGGGAGATCAGGAAGGTCTGCAGCAGAGTGAACTAG--------T-----------------------------
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>SNPs
----------------S-----------------------------------------------S---------------
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---------S----------------------------------------------------------------------
--------S-----------------------------S-----------------------------------------
-S------------------------S----------------S---------------------------S--------
----------------------SS-----S---SS---------------S----S------S------------S----
--------S--S----------------------S-S---S----S-----S--S--------------------S----
---S----------------S-----S-------S---S-----------------------------------------
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---------S----SSSS------------SS----------S------S--------------------S-------S-
-------S----------------S---------------S---------------------------------------
-------------SSSSSSSSSSSSSSSS---------------------------------------------------
-----------S------------SSS-----------------------------------------------------
-----------------------------S----------S---------------------------S-----------
----------S-----------S-----S--S---------------S--------------------------S-----
-----------------------------SSSSSSSS---S---S---------------------------S-S-----
-S--------S--------------------S----S-------------------------------------------
-------------------------------------------------------------S------------------
-----S------------------------------------------------SS----------------S-------
-----------------------S--------------------------------------------------------
--S-----------------------------------------------------------------------------
S-------------------------------------------------------------------------------
----------------------------------------------------S---------------------------
------------------------------------------------------------------S-------------
-----------------SS-----------------------S--------------------------------S----
----------------------------S--S------------------------------------------------
--S-----------------------------------------------------------------------------
-----------------------------------S------S-------------------------------------
----------------S---------------------------------------------------------------
---------------------------------------------------------SSSS----------S--------
------------------------------S-----------------------------------S----S----S---
-S------------------------------------------------------------SSSSSSSSSSS--S----
-------S-------------SS---S---------------------SS---------S--S---SSS---------S-
--------S---S---------S--S----S---S-SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS-----------
----S-----S-------------------------------------------S------------------------S
S--------------------S-------S-----SSS--------S-----S------SS-----------S--S----
--------------------------------------------------------------------------------
-----------------------------------------------------------------S--------------
------S-S--------------------S----------------------S-----------S-------S-S-----
------------------------S---S-S----S------------S--S--S--S-SSSSS---SSSS-SSSSSSSS
SSSSS-SSSS--SSSSSSS-S-SSSSS-SSSS-SS--SSSS-S-S--SSSSSS-SSSS--SSSS--SSS-SS--S-SSSS
-SS-S-S-SSS-SSS-SSSSSS-S-SS-SSSSSSS-SSS--SSSS-SSSSS----SSS-S--S-SS-S-S-SSS-SSSSS
S-SSS--SSS-SS-SSSSSS--SS-SSSSSSSS-SS-SSSSS---S-SSSSSS-SSSSSSSSSSS-SSSS-SSSS-SSSS
SS------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------------------------S----S---
S--S----SSS-S--S----SS----SSSS-SSSSS-SSSS-SSSSSSS--SSS--------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------SS------------------------------
--------------------------------------------------------------------------------
-------
>forward_322
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------GTACGTGTGTGCCTCCAA
GA------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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-------
>reverse_2752
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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-------------------------------AGACATGAACGCCACCTACG-----------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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-------
>forward_1692
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------------------AAGAGCTC
GCAGCAACAGAT--------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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-------
>reverse_3573
--------------------------------------------------------------------------------
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----------------------------------------------------GAAACATGAGAGGCCGAAGC--------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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-------
