>input_sequence_61992
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-------------------------------------------------------------------------GCAA---
----------------------------TAGCTCTACAGCCATACGGGGGACGGCAAAACATTCTTCTCTTGCCTCAGCA
CAGCTTGTTTATTCGGAATCCCTTGAACAGCTGCGACTGCAAACACCATGAGAGTAAGAAGTTCTTTGAGTCCAGTTTAT
GTTGATGATGCGTCCGTCTG------------TGTAGCTAACACGTCTGAACCGCCGGCGCAAATCTTTCAGAAGGAGAT
CATCATCCGGATGCAGCCGGGCTCGGACAAATACCACAAGAGAGCTCTCAAGGTGGCCGCAACCGTCAGCGGTAAGTACG
GACCCGGTGTTGATGGATTA-----TTCCTCTGCATGCAGTGAATTAAACTGGGTGGGTTTCAATTCAGGAGTGGTGTCG
ATCACGGTGGCCGGCAGGGACAGGGATCTGCTGGTGGTCATCGGCGACGGCGTGGACGAGAGCCATCTGACCAAGAAACT
GAAGAAGGAAGTCGGGGAGGCCGAGATAGTGCAGCTGCGGACGCTGCCCGAAGGCACCTCGGCGTCAGGGTATCTGCCGG
GCACGTCCAGGGACGTCGTCGGCGGACAGTCCCGGTCGCCGTACCACTTGCATCCCACGAACACTCCCGGCCGCGTCACG
TACCCGGTCTACGCGCCGTCGCCGGCGGCCAATCCCGGCGCTGCACGGTGGTCGGGAGACCACAGGCAAGCCGAAGCGGG
ATACTATCCCAGTGCGTCCAGCCCGTCCTTCTACCACGCGTCACCCGCGGCAGGGCACAGCGGGTACGGGGGCAGCAGCT
ATGCAAGCGCGGTGGCGTGCAGCCACCCGGCGAACTACTCCCCGATGATCGAGCGGCACCGGCACGACGACAGGAGCTGG
CGTCGGCACCACGGCGGGGGAAAGCCCAGCTGCTGCTCGATACAGTAGCAGTCGTTTCCATCGTGGTGCCAATGTTTGCC
GTTTCAAGTA-----TTTCAAATGAACCAACC-TGTGGCACTACGATGGAAACATTGGCACTAAATTGTGGTG-------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----TTCTTTGGTTCATTCGTACTTCTTCCTTGAATTTGAATTTAGTGCACAACGTTAGTTAGCGGCTTGTACACC---
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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------------------------------------------------------
>chr2D_1_TraesCS2D01G329800
AGAAAAGCAAGAAAAATATGTAAAGTTGAGGGCCCACGTTTTGATCTTGCACCGGGCCTCCGTTTTCTTAGATACAGCCC
TGGTTTGTTTGTCAGGTACATGATGAGATTTTGTACACATGCTTT-TTTTCTCTGAAATATCACGTACAGCTCTCCATTA
TGGTTCAAGAAAGAAAATCTAACCATTTGGTCAATTCAATCTAAAAAA-CAT-TAGTACCCTATTGTGTTGATTTCACCG
GCTATATATCTTTGTTTTGTTCTCCTTCAAACTCCCCAGAGTGGTTTCAGGTCAATTAACGACATCAG-AGACCACTGCT
TCATTAGGTAGGATAAACATGCCTACTC---TAGTAGAGCTGACCTGCAATTATAGAAGTGTTCACCCATCAAGTAG---
-----------------CCAACCATTTCGTTTTTCTTTTATTGGGCTCTACCCGCGATAAAGATGACAGGAGCATGACAA
GGCAGTGCTGTCGCAAGCAGGGGACGTCAAGCTAGCTTTGGTCAAACCAGTGCCATCTACTCCTACTAGTACCTCTCAAC
TGCTACAGTACATACGATCTAGTCACAGCCGCAGCTTTGATCGAAATGACACGCCACGAATCATGTTCCTGGATTCTACA
CTGATTCGGCAACGAATTTTCAATGGCACTATGATTGCTTTTTCCTTGAGAGCTCTTATTATGTCAACACTCCAGGGCAC
ATGTCTATATAATTTGCACCTTTGGCCAA-CTTTTTACTACTCCCTTCTACCAGCTCGATAGAAAAATGACGGGTGAGAT
GTCTTGCTTTGTGTGGCTTAC-GGTATCCTTTTTATGTTTGAATTGGGCAAAGTCTGAGGTGCCAAGTCACATTCTCAAG
TTTGT----AAACAAAAAATGTCGTTTTCTGAAACTGTCATGCAATTCTTGCCACGGCGGTCATCCGTAGCCCTTGTCAG
CGACCAGAAAAACGGAGAAATTTCCATCTCAAAGATAGGAGATCTATATGACCGGTCACCACCACACGTCCTAGCAA---
----------------------------TAGCTCTACAGCCATACGGGGGACGGCAAAACATTCTTCTCTTGCCTCAGCA
CAGCTTGTTTATTCGGAATCCCTTGAACAGCTGCGACTGCAAACACCATGAGAGTAAGAAGTTCTTTGAGTCCAGTTTAT
GTTGATGATGCGTCCGTCTG------------TGTAGCTAACACGTCTGAACCGCCGGCGCAAATCTTTCAGAAGGAGAT
CATCATCCGGATGCAGCCGGGCTCGGACAAATACCACAAGAGAGCTCTCAAGGTGGCCGCAACCGTCAGCGGTAAGTACG
GACCCGGTGTTGATGGATTA-----TTCCTCTGCATGCAGTGAATTAAACTGGGTGGGTTTCAATTCAGGAGTGGTGTCG
ATCACGGTGGCCGGCAGGGACAGGGATCTGCTGGTGGTCATCGGCGACGGCGTGGACGAGAGCCATCTGACCAAGAAACT
GAAGAAGGAAGTCGGGGAGGCCGAGATAGTGCAGCTGCGGACGCTGCCCGAAGGCACCTCGGCGTCAGGGTATCTGCCGG
GCACGTCCAGGGACGTCGTCGGCGGACAGTCCCGGTCGCCGTACCACTTGCATCCCACGAACACTCCCGGCCGCGTCACG
TACCCGGTCTACGCGCCGTCGCCGGCGGCCAATCCCGGCGCTGCACGGTGGTCGGGAGACCACAGGCAAGCCGAAGCGGG
ATACTATCCCAGTGCGTCCAGCCCGTCCTTCTACCACGCGTCACCCGCGGCAGGGCACAGCGGGTACGGGGGCAGCAGCT
ATGCAAGCGCGGTGGCGTGCAGCCACCCGGCGAACTACTCCCCGATGATCGAGCGGCACCGGCACGACGACAGGAGCTGG
CGTCGGCACCACGGCGGGGGAAAGCCCAGCTGCTGCTCGATACAGTAGCAGTCGTTTCCATCGTGGTGCCAATGTTTGCC
GTTTCAAGTA-----TTTCAAATGAACCAACC-TGTGGCACTACGATGGAAACATTGGCACTAAATTGTGGTG-------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----TTCTTTGGTTCATTCGTACTTCTTCCTTGAATTTGAATTTAGTGCACAACGTTAGTTAGCGGCTTGTACACCTCA
ACGAATTTTAAGATAAAGGTGTTATTGGTTTTTTGTGAAAACATTTTGGTTTTTGGAAAACTTCCGATCTATTCATCTTC
AATTATGGATGTACAACGAAAAACGGAAATAAT-AAAAATTAAATCAAGATCCGTAGACCACCTAGCGATGACTACAAGT
GCTAAAGCAAGCCGAAGGCGCACCACCGTCATCGCCCCTCCCTCACCGGAGCTGGGCAAAA-GTTGCTCTAGTATACAGT
TGGGAAGTCGTCGTGCTAAAGTCCCATAGGACCAGCGCACCAGATAAGCAA---CCAACGATGAAGAGGAGC---GTAGA
TCTAAAAGATCCAACCTGAAGACACACGAATATAGACAAACGACGAACACATCTAAGCAAATCCACCCAAGACAGATCCG
CCGGAGACACACCTCCACACGCCCACTGACGATGCTAGATGCACCACCGGAACAGTGGCTAGGCGGGGAGAATCTTA-TC
CA-TCTTCAGGGAGCCACCACCGTCTCGCCTTTCTGAATAAGACACAAACTCTAACAAATTTCAAAGACAC--ATCTAAA
AACGGAGCCCTCCCACCGGCAAGGGCCGGGATCCACCGCGCACC-CATGGCCCTAAGGCCACCGAAGACGAGGCAGACCG
GCGGCGGCACCGGTGGGACGCGGAGGAACCCTAGTTTTT-TAGGG-AGGAGGCTGATGCCTGAGGAGCGTGCCTATGCAT
GCTTTCGTGTTCCTATTGGGCTTGTGAAAACAAATTTGGAGCCACGAGAATTAGAG--AACCAATCTGTGATTGGATGGT
TAGAAGGATAGTGGTATCCTAGTCAATCAGTGATCAAACCTCATGTTGCCACTTTGATCTCTTATAAAGATTCATTGGGA
GGCGATGTTTTCATTGGTAGTAGTAATGCTTCCCCACTAGTGGCTAAGTGGTGTGGTGAACAAATTATAGTTGGGCAGCT
ATTAAATTGCAATATTTATATTTATAACTATGATCATTCATGGTATAATCTCAT
>chr2B_87
--------------------------------------------------------------------------------
------GTTTGTCAGGTACATTATGT-ATTTTGTACATATGTTTTCTTTTCTTTGAAATTTCACGAACAACTCTCCATTA
TGG---AAGAAAGAAAATCAAACCATTTGGTCAATTCAATCTAAAAAACATTGTAGTATCCTATTGTA-----TTCACCG
CCTATATATCTTTGTTTTGCTCTCCTTCAAACTCCCCAGAGTGGTTTCTGGTCAATTAACGACATCAGTGGACCACTGAT
TCAGTAGGCAGGATGAACATGCCTACTCACGTAGTAGAGCTGACCTGCAATTATAGAAGTGATCACCAATCAAGTAGCTC
TAAAACTACTAAAACTACCAACCATTTCCTTTTT-CTTTATTGGGCTCTACCCGTGATAAAGATGACATGAGCATGACAA
GGCGCTGCTTTCGCAAACTGGGGACGTCAACCCAGGTTTGGTCAAACCAGTGCCATCTAGTAGC------ACCTCTCAAA
TGCTACAGTACAGACGATCTAGTCACAGCCGCAGCTTTGATCGAAATGGCACGCCACGAATCATGTTCCTGGATTCCCCA
CTGATTCGGCAACGAATTTTCAATGGCACTCTGATTGCTTTTACCTTGAGTGCTCT---TATGTCAACACCCCAGGGCAC
ATGTCTATATAATTTGCAC-TTTAGTCGA-TTTTTTACTACTTCTTTCTTGCTCGAGA----AAAAAAGGCGGGTGAGAT
GTCCTGCTTTCTGTGGTTTTATGATATCCTCA-TGGGTTTGAATCGGGCAAAGTCTGCGGTGCCAAGTCACCATCTCAAG
TTTGTATGGAAACAAAAATTGTCGTTTTCTGAAACTGTCATGTAATTCTTGGCACGGCAGTCATCCGTGGCACTCGTCAG
CGACCAGAAAGACGGAGAAATTTCCATCTCAAAGATAGGAGATCTATATGACCGGTCACCACCACACGTCCTAGCAC---
----------------------------GAGCTCTACTGCCATACAGGGGACGGCAAAACATTCTTCTCTTGCCTCAGCA
CATCTTGTTTATTCGCAATCCCTTGAACAGCTGCAACCTCAAACACCATGAGAGTAAGAAGTTCTTCAAGT-CAGGTTAT
GTTATTGATGCGTCTGTCTGTTTATCTGTATATGTAACTAACACGTCTGAAGCGCCGGTGGAAATCGTTCAGAAGGAGAT
CATCATCCGGATGCAGCCGGGCTCGGACAAATACCACAAGAGAGCTCTGAAGGTGGCCGCTGCCATCAGCGGTAAGTACG
ACCCCGCTGTTGATTGATT-----CTTCCTCTGCATCCAGTGAATTAAACTGGGTGGGTTTCACTTCAGGAGTGGTGTCG
ATCACGGTGGCCGGCAGGGACAGGGATCTGCTGGTGGTCATCGGCGACGGCGTGGACGAGAGCCATCTGACTAAGAAACT
GAAGAAGGAGGTCGGGGAGGCCGAGATAGTGCAGCTGCGGACGCTACACGAAGGCACCTCGGCGTCAGGGTATCTGCCGG
GCACGTCCAGGGACGTCGGCGGCGGACAGTCCCGGTCGCCGTACCACCAGCATCCCATGAACACTCCCGGCCAGGTCGCA
TACCCGGTCTACGCGCCGTCGCCGGCGGCCAATCCCGGCGCTGCACGGTGGTCGGGAGACCAGAGGCATGCGGAGGCGGG
ATACTATCCTAGCGCGTCCAGCCCGTCCTTCTACCACGCGTCGCCCGCGGCCGGGCACGGCGGGTACGGGGGCAGCAGCT
ATGCAAGCGCGGTGGCGCGCAGCCACCCGGCGAACTACTCCCCGATGATCGAGCGGCACCGGCACGACGACGGGAGCTGG
CGTCGGCACCACGGCGGGGGAAAGCCCAGCTGCTGCTCGATACAGTAGCAGCTGTTTCCATCGCAGTGCCAATGTTTGCG
GTTTCAAGTA--GTATTTCAAATGAACCAACA-TGTGGCACTACGATGGAAACATTGGCACTACATTGTGGTGCGGCAAA
TTTGATAAATTTGACCTATAGACGCAATTAAATCACAAAATGAATTGTCCGTAAAATTATTTCACGCGGCTGACCCGTGG
CGCCTAGCTCTCAGGCGCTGTACTAGTGCAACGCCTGTGAGCTAGGCGCTGCACTAGTGCAACACCTAGGAGCTAGGCGA
TACACTGTATAGTGTGGCGCCTAGCTCTCAGACGCTGCACACGACTTAGTAATTTTCTGATCACACGTGTGCGACGCTGG
CCGTGTAACGCCTATCTGTGAGGCGTTGCACAGTGTAGTGTGGCGCCTTCGTGGCGGGCGTCACACAAAAAGGTCAGCCG
CGTTAAATAGTTTCACAGATAGTTCGTTCTATGATTTGATTCCGTCTATAGGTCAAATTTGTCAAATTTGCCTTGTGGTG
TGGTCTTCTTTGGTTCATTCGTACTTCTTCCTTGAATTTGAATTTAGTGCACAAAGTTAGTTAGCGGCTTGTACACCTGA
ACGAATTTTGAGATAAAGGTGTTACTGGTTTTTTGTGAAAACATATTT--------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------
>chr2A_87
--------------------------------------------------------------------------------
------GTTTGTCACGTACATGATGAGATTTTGTACACATGCTTT-TCTTCTCTAAAATTTCACGTACAGCTCTCCATTA
TGG---ATGAAAGAAAATCTAATCATTTGGTCAATTCAATCTAAAAAAACAT-TAGTATCCTATTGTATTGATTTCACCG
GCTATATATCTTTGTTTTGCTCTCCTTCAACCTCCCCAGAGTGGTTTCTGGTCAATTAACGACATCAGTAGACCACTGCT
TCATTAGGTAGGATAAACATACCTGCTC---TTGTAGAGCTGACCTGCAATTATAGAAGTGCTCACCCATCAAGTAG---
-----------------CCAACCGTTTCCTTTTTCCTTTATTGGGTTCTACCAGTGATAAAGATGACAGGAGCATGACAA
GGCATTGCTTTCGCAAGCAGGGGACGTCAAGGCAGCTTTGGTCAAACCAGTGCCATCTAGTAGC------ACCTCTCAAC
TGCTACAGTACAGACGATCTAGTCACAGCCGCAGCTTTGATCGAAATGACACGCCACGAATCATGTTCCTGGATT--CCA
CTGATTCGGCAACGAATTTTCAATGGCGCTATGATTGCTTTTTCCTTGAGAGCTCT---TATGTCAACACTCCAGGGCAC
ATGTCTATATAATTTGCACATTTCCTCAATTTTTTTACTACTC---------------------AAATGGCGGGTGAGAT
GTCTTGCTTTGTGTGGTTTAC-GATATCCTTA-TATGTTTGAATTGGGCAAAGTCTGCGGTGCCAAGTCACATTCTCAAG
TTTGT----AAACAAAAAATGTCGTTTTCTGAAACTGTCATGCAATTCTTGCCACGGCAGTCATCCGTAGCCCTCGTCAG
CGACCAGAAGAACGGAGAAATTTCCATCTCGAAGATAGGAGATGTATATGACCGGTCACCACGACGCGTCCTAGCACAGC
CAGCACTATCTATGCATGCGTAGCGCACGAGCTCTACAGCCATACGGGGGACGGCAAAACATTCTTCTCTTGCCTCAGCA
CATCTTGTTTATTCGGAATCCCTTGAACAGCTGCGACTGCAAACACCATGAGAGTAAGAAGTTCTTGGAGTCCAGTTTAT
GTTGGTGATGCGTCTGTCTGTTTATCTG--TATGTAACTAACACGTCTGAACCGCCGGTGCAAATCTTTCAGAAGGAGAT
CATCATCCGGATGCAGCCGGGCTCGGACAAATACCACAAGAGAGCTCTCAAGGTGGCCGCCGCCGTCAGCGGTAAGTACG
AGCCCCGCGGCTGATCGATTCTTCCTTCCTCTGCATCCGGTGAATTAAACTGGGTGGGTTCCAATTCAGGAGTGGTGTCG
ATCACGGTGGCCGGCAGGGACAGGGATCTGCTGGTGGTCATCGGCGACGGCGTGGACGAGAGCCATCTGACCAAGAAGCT
AAAGAAGGAGGTCGGGGAGGCCGAGATAGTGCAGCTGCGGACGCTACCCGAAGGCACCTCGGCGTCGGGGTATCTGCCGG
GCACGTCCAGGGACGTCGTCGGCGGACACTCCCGGTCGCCGTACCACTTGCATCCCACGGACACTCCCGGCCGCGTCACC
TACCCGGTCTACGCGCCGTCGCCGGCGGCCAATCCCGGGGCTGCACGGTGGTCGGGAGACCACAGGCAAGCCGAAGCGGG
GTACTATCCCAGCGCGTCCAGCCCGTCCTTCTACCACGCGTCGCCCGCGGCCGGGTACGGCGGGTACGGGGGCAGCAGCT
ATGCAAGCGCGGTGGCGCGCAGCCACCCGGCGAACTACTCCCCGATGATCGAGCGGCACCGGCACGACGACGGGAGCTGG
CGTCGGCACCACGGCGGGGGAAAGCCAAGCTGCTGCTCGATACAGTAGCAGTTGTTTCCATCGTGGTGCCAATGTTTGCC
GTTTCAAGTACTGTATTTCAAGTGAACCAACCTTGTGGCACTACGATGGAAACATTGGCACTACATTGTGGTG-------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----TTCTTTCGTTCATTCGTGCTTCTTCCTTGAATTTGAATTTAGTGCACAAAGTTAGTCAGCGGCTTGTACACCTGA
ACGAATTTTAAGATAAAGGTGTCAT---TTTTTTGTGAAAACATTTTTTTCA--AGAAAATTTCTAATCTATTCATCTCC
AATTATGGATGTACAACGAAAACCAAAAATAAT-AAAAATTACATCCAGATCCGTAAACCACCTAGCGACAACTA-----
----AAGCGAGCCGAAGACGCACCGCCGTCATCA-CCCTTCCTCACCGGAGTCGGACAAAA-CTTGTTGTGGTATACAGT
TGGGAGGTCATCGTGCTAAGACCCCATAGAACCAACGCATCAAATAAGCAATCTCCACTGATGAAGAGGAGC---AAAGA
TCTAAAGGATCCAACCTAAAGACACACAAACATAGACAAACGACGAACAGATCTAAGCAAATCCACCAAAGACAAATCCG
TCGGAGACACACCTCCACATGCCCATTGACGATGCCAGATCCACCATGGGGACAGGGGCTAGGCGGGGAGAACCTTA-TC
CA-TCTTCAGGGAGCCGCCACCGTCTCGCCTTCCTGAATAGGACACAAACCTTAACAAATCTCGAAGACAC--ATCTAAA
AACGGAGTCCTCCCACTGGCAACAGCCGGGATCCACCATGCACC-CATGGCTCTAACGCCACTGAAGACGAGGTGGACCG
GCGGCGGCATCGGTGGGACGCAGAGGAACCCTAGTTTTT-TGGGG-AGGAGGTTCATGCCTGAGGAGCATGC--------
--------------------CTTGTGAAAACAAATTTG-AGCCAGGAGAAGTAGAGAAAACCAATCTGTGCTTGGATTGT
TATAAGGATAGTGGTATCCTAGTCAATCAGGGATCAAACATCAGGTTGCCACTTTGATGTCTTATAAAGATTCAGTGGGA
GGCGATGTTTTCATTGGTAGTAGTAATGCTTCCCCACTAGTGGCTAAGTGGTGCGGTGAACAAATTACAGTTGGACAGCT
ATTAAATTGCAATATTTATATTTGTAACTATGAGCATTCATGGTATAATTTCAT
>chr2D_2111
--------------------------------------------------------------------------------
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----------------------------------------------TTTTTG--GGAAAACATCCAATCTATTAATCTTC
AATCATGGTGGTACAACAAACACTAAAAATAATAAAAAATTACATCCAGATCTGTAGACGACCTAGCGACGACTACAAGC
ACTAAAGTGAGCCGAAGGCGCGCCACCGTCATCGCCCCTTCATCACCGGAG-CGGGCAAAA-CTTGTTGTAGTAGACAAC
TCGGAAGTCGTCGTGGTAAGGCCCCATAGGACTAGCGCACCAGAACAGCAA---CCGCCGCCAATGAATAGTAGCGTAGA
TTGGAAGTATCCAACCTGAAAACCCACGAACGTAGATGAACGACGAACAGATCCGAGCAAATCCACCAAGGACAGATCCG
CCGGAGACACACATCCACACGCCCACCAGCAATGTTAGATGCACCACCGGAACGGGGGTTAGGCGGGGAGAACCTTA-TC
CTGTCTTCAGGGAGCCGTCACCGTCTCACCTTCCTGAGTTCGACACAAACCCTAACAAATCTCAAAGACAC--ATCTAAA
AACGAAGCCCTCCCACCGGCAAGGGCCGGGATCCGCCGCGCTCC-CATGACCCTAAGGCCATTGGAGACGAGGCGGACTG
GCGCCAGCGCCAGTGGGAGGCAGAGGGACCCTAGTT--------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------
>chr6D_2111
--------------------------------------------------------------------------------
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----------------------------------------------TTTTTG--GATAAATTTCCGATCTATCCATCTTC
AATTATGGTAGTACAACGAACACCAGAAATAAT-TAAAATTACATCCAGATCCGTAGACCACCTAGCGACGACTACAAGC
ACTGAAGCGAGCCGAAGACGCGCCGCTGTCATCGCCCCTCCCTCGCCGGAGCCGGGCAAGT-TTTGTTGTAGTAGACAGT
CGGGAAGTCGTCGTGCTAAGGCCCCGTAGAACCAACACACCAGAACAGCAA---CCGTCGCCGATGAAGAGT---GTAGA
TAAGAAGGATCCAACCTGAAGACACACGAACAAAGACGAACGACGAACAGATCCGAGCAAATCCACCAGAGACAGATCCA
CCGGAGACACACCTCCACACGCCCACCGACGATGCTAGACGTATCACCGAAACGGGGACTAGGCGGGGAGACCTTTATTC
CA-TCTTCAGAGAGTCGCCACCGTCTCGCCTTCCTGAGTAGGACACAAACCCTAACAAATCTCGAAAAAAATAATCTAAA
AACGGAGCCCTCCCACCGGCAAGGGCCGGGATCCACTCCGCCCC-CATGGCCCTAAGGCCACGGTAGACGGGGCGGACCG
ACGCCGGCGCCGGCGGGGGACAGAGAAACCCTAGTTTTT-----------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------
>chr7D_2111
TTTTTCGGA-----------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------AAAACTTTCAATCTATTCATCTTC
AATCATGGTAGTACAATGAACTCTAGAAATAAT-AAAAATTACATCCAGATCCGTAGACCACCTAGCGACGACTACAAAC
ACTGAAGCGAGCCGAAGGCGCGCCGCTGTCATCGCCCCTCTCTCACCGAAGCCGGGCAAAC-CTTGTTGTAGTAGACAGT
CGGGAAGTCGTCGTGCTAAGGTCCCATAGAACCAGCGCACCAGAACAGCAA---CCGTCGCGGATGAAGAGT---GTAGA
TCAAAAGGATCCAACCTGAAGACACACGAACGAAGACGAACGACGAACAGATCCGAGCAAATCCACCAAAGACAGATCCG
CCGGAGACACACCTCCACACGCCCACCGATGATGGTACACGCATCACCGGAACGGGGACTAGACGGGGAGACCTTCATTC
CA-TCTTTAGGGAGCCGCCGCCGTCTCGCCTTCCTGAGCAAAACACAAACCCTAACAAAGCTTGAAAAAAG--ATATGAA
AACGGAGCCCTCCCACCGGCAAGGGCTGAGATCCACTCCGCCTC-CATGGCCCTAAGGCCACCGAAGACGGGACGGACCG
GCGTTGGCACCGGTGGGAGGCAAAGAACCCTAGT----T-TTGGGGAGGTGGC---------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------
>chr2D_2116
GGATAA--------------------------------------------------------------------------
--------------------------------------------------------------------------------
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-----------------------------------------------------------ATTTCTGATTTATTCATCTTC
AATCATGATAGTACAATGAATATTAGAAATAAT-AAAAATTGCATTCAGATCCGTAGACCACCTAGCGGCGACTACAAGC
ACTGAAGCGAGCCGAAGGCGCGCCGCTGTCATCGCCCCTCCCTCGCCGGAGCCGGGCAAAC-CTTATTGTAGTAGACAGT
CGGGAAGTCGTCGTGCTAAGGCCCCGTAGAACCAACGCACCAGAACAGCAA---CCGCCGCCGAAGAAGAGT---GTAGA
TAAGAAGGATCCAACCTGAAGACACACGAACAAAGACGAACGACGAACAGATCCGAGCAAATCCACCAAAGACAAATCCA
CCAGAGACACACCTCCACACGCCCACCGACGATGCTAGACGCATCACCGGAACGGGGAGTAGGCGGGGAGACCTTTATTC
CA-TCTTCAGGGAGTCGCCGCCGTCTCGCCTTCCTGAGTAGGACACAAACCCTAACAAATCTCGAAAAAGATCT----AA
AAAGGAGCCCTCCCACCGGCAAGGGCCGGGATCCACTCCG-TCC-CATGGCCCTAAGGCCATCGTAGACGGGGCGGACCG
ACGCCGGCGCCGGCGGGAGGCAGAGAAACCCTAGTTTCT-TTGGGTAGGAGGC---------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------
>chr5B_2116
GGATAA--------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
-----------------------------------------------------------ACTTCCGATCTATTCATCTTC
AATCATGATGGTACAACGAACACTAGAAATAAT-GAAAATTACATCCAGATCCGTAGACCACCTAGCGACGACTACAAGC
ACTGAAGCGAGCCGAAGGCGCGCCGCTGTCATTGCCCCTCCCTCGCCGGAGCCGGGCAAAC-CTTGTTGTAGTAGACAGT
CGGGAAGTCGTCGTGCTAAGGCCCCGTAGAACCAACGCACCAGAACAGGAA---CCACCGCCGATGAAGAGT---GTAGA
TAAGAAGGATCCAACCTGAAGACACACGAACAAAGACGAACGACGAACAGATCCGAGCAAATCCACCAGAGACAGATCCA
CCGGAGACACACCTCCACACGCCCACCGACGATGCTAGACGCATCACCGGAACGGGGACTAGGCGGGGAGACCTTTATTC
CA-TCTTCAGGGAGTCGCCGCCGTCTCGCCTTCCTGAGTAGGACACAAACCCTAACAAATCTCGAAAAAAG--ATCCAAA
AATGGAGCCCTCCCACCGGCAAGGGCCGGGATCCACTCCG-TCCCCATGGCCCTAAGGCCACGGTAGACGGGGCGGACCG
ACGCCGGCGCCGGCAGGAGGCAGAGAAACCCTAGTTTCT-TGGGGTAGGAGG----------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------
>chr6D_2116
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
------------------------------------------------------GGAAAATATCCAATCTATTCACCTTC
AATCATGGCAGTACAATAAACAGCAGAAATAAT-AAAAATTACACCCAGATTCATAGACCACCTAGCGATGACTACAAGC
AGTGAAGCGAGCCAAAGGCACGCCGCCGCCATCGCCCCTTCCTCACCGGAGTCGGACAAAAACTTGTTATAGTAGACAGT
CGGGAAGTCGTCGTGCTAAGGCCTCATAGGACCAGCGTATCATAACAGCAA---CTGCCGCTGATAAAGAGTAACGTAGA
TCGGAAGGATCCAACTTGAAGACACACAAACATAAACGAACGACGAACAGATCTGAGCAAATCCACCAAAGACAGATCCG
CCGGAGACACACCTCCACACGCCCACCGACGATGCTAGATGCACCGCCGGAATGGGGGCTAGGAGAGAAGAACTTTATCC
CA-TCTTTAGGGAGCCGCCGCCGTCTCGTCTTTCTGAGCAGGACACAAACCCTAACAAAACTCGAAAACAC--ATCTAAA
AATGGAGCCCTCCCACCGGCAAGAGCCGGGATCCACCGCGCCCC-CATGGCCCTAAGGTCACCGGAGACGAGGCGGGCCG
GCGACGGCGCCGGTGGGAGGCGGGGGAACCCTAATTTTT-TAGGGGAGGAGGCGGCTGCGTGA-----------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------
>chr7D_2118
--------------------------------------------------------------------------------
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--------------------------------------------------------AAAACTTCCAATCTATTCATCTTC
AATTATGGCAATACAACGAACACCAGAAATAAT-AAAAATTACATCCAGGTCTGTAGACCACCTACCGATGACTACAAAC
ACTGAAGCGAGCCGAAGGCGCGCCGCTGTCATCGCCCGTCCCACACCAGAGCCGGGC-AAAACTTGTTGTAGTAGACAGT
CGGGAAGTCGTCGTGCTAAGGTCCCATAGGACCAGCACAGCAGAACAGCAA---CCGCCGCCGATGAAGAGTAGCGTAGA
TCGGTATGATCTAACCTAAAGAAACACAAACATAGACGAACTACGACCAGATCCGAGCAAATCCACCAAGGATAGATCCG
CCGGAGACACACCTCCACACGCCTACCGATGATGCTAGACACACCACCGGAACGGGGGCTAGACGGGGAGAACCTTATTC
CA-TCTTCAGGGAGCCACCGCCGTCTCGTCTTCCTGAGCAGGACACAAACCCTAACAAAAGTTGATGAAAC--ATCTAAA
AACGGAGCCCTCCCGCCGGCAAGGGCCGAGATCCACCGCACTGC-CATGGCCCTAAGACCACAGGAGACGAGGCGGACCG
GCGGCGGCGGCGGCGGGAGGCAAAGGAACCCAAAGTTTTCTTGGGGAGTAGGCCGAGCC---------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------
>chr7A_2128
--------------------------------------------------------------------------------
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------------------------------------------------------------------ATCTATTCATCTTC
AATCAAGGCGGTACAACAAACACCAAAAATAAT-AAAAATTACATCCAGATCCGTAGACCACCTAGCGATGACTACAAGC
ATTGAAGCGAGCCGAAGGCGCATCGCCGTCATCGCCCCTCCATTACGGGATCCGGGC-AAAACTTGTTGTAGTAGACAGT
CGGGAAGTCATCGTGCTAAGGCCCCATAAGACCAGCGCACCAGAACAGCAA---CCGCCACCCATAAAGAGTAGCGTAGA
TCGGAAGGATCTAACCTGAAAACACACGAACGTAGACGAACGATGAACAGATCCGAGCAAATCCATCAAGGACAGATCCG
CCGGAGACACACATCCACACGCCCACCGACGATGCTAAACGCGCCACCAGAACAAGGGCTAGGCGGGGAGAACCTTATTC
CA-TCTTCAGGGAGCCGCCACCGTCTCGCCTTCCTGAGTTAGACACAAACCCTAACAAATCTCAAAGACAC--ATCTAAA
AACGGAGCCCTCTCACCGGCAAGGGCCGGGATCCGCCGTGCTCC-CATGACCCCAAGGCCACCGGAGACGAGGCGGACCA
GTGACGGTGTCGATGGGAGGCAGAGGAACCCTAGTT------GGGGAGGAGGCGGGTGCCTGAG----------------
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>chr7A_2128
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------------------------------------------------------------------ATCTATTCATCTTC
AATCATGGCGGTACAACAAACACCAAAAATAAT-AAAAACTACATCCAGATCCGTAGACCACCTAGCGATGACTACAAGC
ATTGAAGCGAGCCGAAGGCGCGTCGCCGTCATCGCCCCTCCATTACGGGATCCGGGC-AAAACTTGTTTTAGTAGACAGT
CGGGAAGTCGTCGTGCTAAGGCCCCATAAGACCAGCGCACAAGAACAGCAA---CCGCCACCCATAAAGAGTAGCGTAGA
TCGGAAGGATCTAACCTGAAAACACACGAACGTAGACGAACGATGAACAGATCCGAGCAAATCCATCAAGGACAAATCCG
CCGGAGACACACATCCACACGCCCACCGACGATGCTAAACGCGCCACCAGAACAGGGGCTAGGCGGGAAGAACCTTATTC
CA-TCTTCAGGGAGCCGCCACCGTCTCGCCTTCCTGAGTTAGACACAAACCCTAACAAATCTCAAAGACAC--ATCTAAA
AACGAAGCCCTCTCACCGGCAGGGGCCGGGATCCGCCGCGCTCC-CATGACCCCAAGGCCACCGGAGACGAGGCGGACCA
GTGACGGTGTCGATGGGAGGCAGAGGAACCCTAGTT------GGGGAGGAGGCGGCTGCCTGAG----------------
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>SNPs
S--S---S-SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSS-----------------------------------------------------S--------------------
---SSS----------------------------------------------------S--------S------------
-------------------S----------------------------S-------------------------------
-------------------------------------------------------------S------------------
----------------------------S------S------------------S-------------------------
----S----S----------------------S--------------------------S-SSSSSSSSS----------
------------S---------------------------------------------------------------SS--
--------------------------------------------------------SSS---------------------
-------------------S---S-S----S-------------S----SS-SSSSSSSSSS-------S----------
----------------S------S-------SS------------------------S----------------------
----------------------------------------------------------S---------------S-----
----------------------------------------------------------------------------S---
----------------------------S---------------------------------------------------
--S---------------------------------------------------------------S-------------
----S---------S---------------------S---------------------S---------------------
------------------------------------------------------------SS------------------
SS------------S----S----------------S-------------------------------------------
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---------S-----------------------------------S----------------------------------
-------------------------------------------------------------------------------S
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------------S-----------------------------S--------S------S---------------------
-----------------S-----------------------------------------------------S--------
----------------------------------------------------S---------------------------
---------------------------------------------------------------S----------------
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------------------------------------------------------S-----------------------S-
-----------------------------------------------SS--SSS--------------------------
----------------------S-S-----------------S---S--------------------------------S
S-------S-------------------------------------------S---------S---S-S-----------
-------------------S-------------------------------------S----------------------
------S-----------------------S------------------S-----------------S------------
-------------------------------------------------------S----------------S-------
--------------------------------------------------S---------S-------------------
--------------------------------------------------------------------------S-----
--------------------------------------------------------------------S---SSSSSSSS
SSSSSSSSSSSSSSSSSSSS------------------S-----S-----S-------------------S------S--
--S---------------------------S--------S---S--------------S---------------S-----
-----------------------------------------------------S-------------S------S-----
-----------------------S---------S---------------S----
>forward_56
------------------------------------CGTTTTGATCTTGCACCGGG------------------------
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>reverse_1205
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----ATGATGCGTCCGTCTGTGTA--------------------------------------------------------
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>forward_1069
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---------CCACCACACGTCCTAGCAAT---------------------------------------------------
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>reverse_3281
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GCTTTCGTGTTCCTATTGGGC-----------------------------------------------------------
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