>input_sequence_61942
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----------ATGCTCGATTTTCATGCCTTATTATCTCCAAACTT----AAACAAATCAGCAAAGCAAAGCATT-----G
AGGAAACTAACCGGGATCCG----TCCCAATCCAAACTGTTGTGGGAGCAGATGGGGGACGTGGCCAAGGACCTGGCCGC
CGGCACGGTGGGCGGCGCGGCGCAGCTGGTCGTCGGCCACCCGTTCGACACCATCAAGGTGAAGCTGCAGAGCCAGCCCA
CGCCGCCGCCCGGCCAGCCGCCCAAGTTCGCCGGCGCCATGGACGCCGTCAAGCAGACCATCTCGGCCGAGGGCCCCCGG
GGCCTCTACAAGGGCATGGGCGCCCCGCTCGCCACCGTCGCCGCCTTCAACGCCGTGCTCTTCACCGTCCGGGGCCAGAT
GGAGGCCCTGCTGCGCTCCGAGCCCGGCGCCGCGCTCACCGTCGGCCAGCAGGTCGTCGCCGGCGCTGGGGCCGGCGTCG
CCGTCTCCTTCCTCGCCTGCCCCACCGAGCTCATCAAGTGCAGGCTGCAGGCGCAGAGCGCGCTGGCCACAGCCGCTCCT
GCCGCCGCCGCCGCAGCCGCT------CCCGCGGGCGGCGCGGCTGCC--------------------------------
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-------------------------ACCGTCACCGCCACGGCCAATGCTGCCGCGGTCAAGTACGGCGGGCCGCTGGACG
TGGCGAGGCACGTGCTGCGGTCGGAGGGCGGCGTGCGGGGCCTCTTCAAGGGCCTGGTCCCCACAATGGCGCGCGAGATC
CCCGGCAACGCGCTCATGTTCGGCGTCTACGAGGCCACGAAGCAGTTCATTGCCGGCGGGCAGGACACGTCGGAGCTGGG
CAGGGGCTCCCTGATCCTCGCCGGCGGGGTCGCGGGGGCGGCGTTCTGGGGGTCCGTGTACCCGACCGACGTGGTGAAGA
GCAAGCTCCAGGTGGACGACTTCAAGAACCCAAAGTACTCGGGCTCCATGGACGCGTTCAAGAAGATCCTCGCCGCCGAC
GGGGCCAGGGGTCTGTACAGGGGGTTCGGGCCGGCCATGGCCCGCAGCGTCCCGGCCAACGGCGCCTGCTTCCTCGCCTA
CGAGGTGACCAGGTCCCTGCTCTAG-------------------------------------------------------
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>chr1D_1_TraesCS1D01G195400
GAACCTTGCAATGACTGGCAGCAATGGCAGAATCATTGGTGATAATAAAGGTTGAGCTTTACATGTGCTGTGCATGTGTG
TTATGTGTGGAGTGAGCGAGTGTAGTAGTTGGTGATTTGGCTTGTGGTAATGGTTGGCTGGGAGTGGATTGGCCATCCGA
CGGCGATCCAGTGGTGAGGGAGCGATTGTCTGACGGCGATGTGGGTGCGCCTTTGTGG-TTTGTTGGGTTGCAGCGTCTG
GTGAGGGGGTGGGTGGGTGGTTCTGGGCTTGCTTGGCATCTGAACCACCTCACCCTTCTTCCTGGCCTGTATTTTTTTGC
TGCTGGGTAGTGGTGTGTTCTCTTCTCATCTTTCTTCTTTGTGGAGGGGCGGATTGAGTGCAGCTCCATTTCGCCTCGGA
GTCAAAGGTAATTCTCTTCCGTTTTGTCCTGTGAATGCCCGCTCTTCATGTTCATGTGCAGACCGTGGATAGTTGGGTGG
GGTTGCAGTTCTTCAGAT----TCATCGGATGCGATG------------------------ATCTTTTTAAGTTCTTGCT
GAATGTGCCTTGTGATTCTTGAGGCACAGACAAAATCCAAAGCTTTGGTGATCTAGTTGAGAC--------------AGG
CTGTCCTGTTGCATTGCTGTGCTGACTGCGTATGTGTCAGGATTGCGATGATACGGTTGAAACTTGTCGCGCGTCTGTGG
TTTATATATTCTCGG--TATTTTTTTTAATGATCATTAGGG---GAGAGTGCCCACCT--GAATTTCATTTAAAAGTGCC
AAAGCCAGAGTTTGACAGCAGTTTTTGGGGGACAGGGGATACAGATAAGTATATTTTTTTCAGTTACTTACACGGAGTAG
TTTAGTGTCGTGCTTCTGTGGTTTCGCTCTCGCCAGTGGTTTTGGCATAGAGATTTGTGGCGATGCTGCAAGGCTGCCAG
GATGGCGCTGCTGGTCTTTGTGGTTTGACAGGATCTTTTCCCGTCAAACAGTATCGTATCGTATAGGATGCGAACATTGA
CAGGCTGTTGATGCTCGATTTTCATGCCTTATTATCTCCAAACTT----AAACAAATCAGCAAAGCAAAGCATT-----G
AGGAAACTAACCGGGATCCG----TCCCAATCCAAACTGTTGTGGGAGCAGATGGGGGACGTGGCCAAGGACCTGGCCGC
CGGCACGGTGGGCGGCGCGGCGCAGCTGGTCGTCGGCCACCCGTTCGACACCATCAAGGTGAAGCTGCAGAGCCAGCCCA
CGCCGCCGCCCGGCCAGCCGCCCAAGTTCGCCGGCGCCATGGACGCCGTCAAGCAGACCATCTCGGCCGAGGGCCCCCGG
GGCCTCTACAAGGGCATGGGCGCCCCGCTCGCCACCGTCGCCGCCTTCAACGCCGTGCTCTTCACCGTCCGGGGCCAGAT
GGAGGCCCTGCTGCGCTCCGAGCCCGGCGCCGCGCTCACCGTCGGCCAGCAGGTCGTCGCCGGCGCTGGGGCCGGCGTCG
CCGTCTCCTTCCTCGCCTGCCCCACCGAGCTCATCAAGTGCAGGCTGCAGGCGCAGAGCGCGCTGGCCACAGCCGCTCCT
GCCGCCGCCGCCGCAGCCGCT------CCCGCGGGCGGCGCGGCTGCC--------------------------------
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-------------------------ACCGTCACCGCCACGGCCAATGCTGCCGCGGTCAAGTACGGCGGGCCGCTGGACG
TGGCGAGGCACGTGCTGCGGTCGGAGGGCGGCGTGCGGGGCCTCTTCAAGGGCCTGGTCCCCACAATGGCGCGCGAGATC
CCCGGCAACGCGCTCATGTTCGGCGTCTACGAGGCCACGAAGCAGTTCATTGCCGGCGGGCAGGACACGTCGGAGCTGGG
CAGGGGCTCCCTGATCCTCGCCGGCGGGGTCGCGGGGGCGGCGTTCTGGGGGTCCGTGTACCCGACCGACGTGGTGAAGA
GCAAGCTCCAGGTGGACGACTTCAAGAACCCAAAGTACTCGGGCTCCATGGACGCGTTCAAGAAGATCCTCGCCGCCGAC
GGGGCCAGGGGTCTGTACAGGGGGTTCGGGCCGGCCATGGCCCGCAGCGTCCCGGCCAACGGCGCCTGCTTCCTCGCCTA
CGAGGTGACCAGGTCCCTGCTCTAGGCGGCCAGCGGGCTGCCTTGTTTCTACACATGGATCGCCATTCTTAACTTCGTTC
TTGTTCCTCCACTCTGATGATTCAGTTATCGTCGTCCGGACAGTCCTGTCTCT--GTAACAGAAAACCAAGCCATGTGTG
TGAATCGAACGAAATTTCATTCCT--------------TTTCTTTTTGCGAGAAGGCCAAGGTCAT--------------
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-------------------------------------------------------------------ATATTAAAATTAG
GAACCCTCTAGCTCGCAACCGTTC---GCGAGCTAGGGGTGGCATTTGCAAACTGCCGGGTGACAGTCTTAGTGTTTTTG
GATGGCAATTTTTGCACAAAAGCATGGCATTTTGTTTATTTTGGCGCAGTTTTCATCCAGAAACTGCCACCGTCAAATCT
TAATTGTGTGGCGTCTGGGACGT------------TGTTCCTAGCAACCGTTAGTCAGGTAACATTGCCGTAAAATTATT
TGACCTTTAAAAAGAAGACCCTAATATCTGGCTGACAGATGCCATGGGAGGTGGTCCTGACGAACGATTCATTTGCCCTG
CAAACTAAATCATTCGCTGGGGCAAAAAAAAAAAAAACAACGAACCCCTCCCTCTCCACGACAATAGTTAAGACATCCAG
TTGGGCCAAAAAAAAACGTTTTCCTGACACACTACAAAACTAAAAAATTGCTACTTGGACCTCATTTCAAATGGCTAAAA
AACAAACAGAAAAAATACATAGCAGCATACTGTTTTGATAGAAATGCCATGACAAACGCAAAATTGTTTGAAAACTCTCA
TACAGAAAAACTT-----AGAACACATGAAATTTACAACATGGCATGCCCTAGATGAT--AAAAATTGGCATGCCATGCT
AATTTATGAACTATAAAATTGGCATGGCTGTGAAACAGACATACCAGTGGAATAGACATAGGAAACAAC---ATTTTTTT
CATAAATTGACATGCTAGCTACTATGGCTATGCTCTAAGAACATCTAATGGGGACATGCTAGCTACCTAGGAATAGACAT
AAAATTACCATGGGAAGATGTCGAAAA
>chr1A_2
-AACCTTGCATAGACTGGCAGCAATGGCAGGATCGTTGGTGATAATAAAGGTTGAGCTTTACCTGCGCA-------TGTG
TCATGTGTGAGTGTA------GTAGTGGCTGGTAATTTGGCTTGTCGGAATGGTTGGCTGGGAGTGGATTGGCCATCCGA
CGGCGATCCAATGGTGAGGGAGCGATTGTCTGACGGCGATGTGGGTGCGCCTTTGTGGTTTTGTTTGGTTGCAGCGTCTG
GTGAGGGGGTGGGTGGGTGGTTCTGGGCTTGCTTGGCATCTGAACCACCTAACCCTTCTTCCTGGCCTGTATTTTTGCCG
CTGGCT-TAGTGGTGTGTTCTCTCCTCATCTTTGTTCTGGGTGGAAGGGCGGATTGAGTCCAGCTCCATTTCGCCTCGGA
GTCAA-GGTAATTCTCTTCCATTTCGTCCTGTGAATGCCCGCTTTTCCTGTTCATCTGCAGACCATGGAAAGTTTGGAAA
CTTGTTGGGTGGGGTTGTAGGATCATCGGATGCGATGGTCTTTTTAAGTTCTTGCGTGATGATCTTTTTAAGTTCTTGCT
GAATGTGCCTTGTGATTCTTGATGCACAAACAAAATCCAAAGCTTTTGTGATCCAGTTGAGAC-------TTGAGACAGG
CTGTCATGTTGCATTGCTGTGGTGACTGCGTGTGTGTCAGGATTGCGATGATACGGTTGAAACTTGTCGGGCGTCTGT-A
TTTATATATTCTTGG--TTTTTTTTTGAATGATCGTTTAGGGGAGAGATTGCCCGTCT--GAATTTCATTTAAAAGTGCC
AAAGCCAGAGTTTGACAGCAGTTTTTGGGGGACAGGGGATACAGAGTATTTTTTTTTTACTCAC----------------
---AGTGTCGTGCTTCCGTGGTTTCGCTCTCGCCAGCGGTTTTCGCATAGAGATTTGTGTCGATGCTGCAAGGTTGCCAG
GATGGCGCTGCCGGTCTTCGTGGTTTGACAGGATCTTTTCCCGTCAAACGGTATCGTATCGTATAGGATGCGAACATTGA
CAGGCTGTTGATGCTCGATTTTCATGCCTTATTATCTCCAAAAAACTTAAAACAAATCAGCAAAGCAAAGCATT-----G
AGGAAACTAATCGGGATCCATCCTTCCCAATCCAAACTGTTGTGGGAGCAGATGGGGGACGTGGCCAAGGACCTGGCCGC
CGGCACGGTGGGCGGCGCGGCGCAGCTGGTCGTCGGCCACCCGTTCGACACCATCAAGGTGAAGCTGCAGAGCCAGCCCA
CGCCGCCGCCCGGCCAGCCGCCCAAGTTCGCCGGCGCCATGGACGCCGTCAAGCAGACCATCTCGGCCGAGGGCCCCCGG
GGTCTCTACAAGGGCATGGGCGCCCCGCTCGCCACCGTCGCCGCCTTCAACGCCGTGCTCTTCACCGTCCGGGGCCAGAT
GGAGGCCCTGCTGCGCTCCGAGCCCGGCGCCGCGCTCACCGTCGGCCAGCAGGTCGTCGCCGGCGCCGGGGCCGGCGTCG
CCGTCTCCTTCCTCGCCTGCCCCACCGAGCTCATCAAGTGCAGGCTGCAGGCGCAGAGCGCGCTGGCCACCGCCGCTCCT
GCCGCCGCCGCCGCCGCTGCTGCTCCTGCCGCAGGCGGCGCGGCTGCC--------------------------------
--------------------------------------------------------------------------------
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-------------------------ACCGTCACCACCACGGCCAGCGCTGCCGCGGTGAAGTACGGCGGGCCGCTGGACG
TGGCGAGGCACGTGTTGCGGTCGGAGGGCGGCGTGCGGGGCCTCTTCAAGGGCCTCGTCCCCACAATGGCGCGCGAGATC
CCCGGCAACGCGCTCATGTTCGGCGTCTACGAGGCCACGAAGCAGTTCATTGCCGGCGGGCAGGACACGTCGGAGCTGGG
CAGGGGCTCCCTGATCCTCGCCGGCGGGGTCGCGGGGGCGGCGTTCTGGGGGTCCGTGTACCCGACCGACGTGGTGAAGA
GCAAGCTCCAGGTGGACGACTTCAAGAACCCAAAGTACTCGGGCTCCATGGACGCGTTCAAGAAGATCCTCGCCGCCGAC
GGGGCCAGGGGTCTGTACAGGGGGTTCGGGCCGGCCATGGCGCGCAGCGTTCCGGCCAACGGCGCCTGCTTCCTCGCGTA
CGAGGTGACCAGGTCCCTGCTCTAGGCGACCTGCAGGCTGCTG------------------GTCATTCTTGACTTCGTTC
TTGTTCCTCCACCCTGATGGTTCAGTTATCGTCGTCGGGACAGTCCTCTGTCTCTGTAACAGAAAACCAAGCCATGTGTG
TGAATCGAACGAAATTTGCATTTGCA---TTTTCTTTCTTTCTTTCTG-GAGAAGGTCAAGGTCATCTATACCCCTGTAT
AGTGTGCGCATAACTTTAACAGATGGTCGGATAAAGCCAATCCGACGGTGCAGAGATGGCAAATCAAAGCATTGCTGGCC
GTTGGATATCATCTACATTTTATCAGATTTTATCACATGTACAATCTAGAAGACTCCATGGAAACTTAAGAATAATGCAC
AAATCTCAAAACACGAGCACTTCTTCTTTGTTCTACAATCTTCCGTATCATAATTATCTAAATTTTTTTCTACATGAATT
GCCATTATTTATTTTTACTTTATGCTTTACAACGCACAATTTCATGAATCTTAAAATAGATCAGTTTTTTATAAAAACTA
AATGATTTTGAATGAGATGAACTATAAGAATTAAACGAACATCTACATCATGCATATATGACTTAAAACTTACATACTAT
AATATGATATTTATTCATAATTTAGTTGCCAAATCTCATGCGTGTAATGCACGTGTACCTTACTAGTATATTAAAATTAG
GAACCCTCTAGCTAGCGACCGTTCATTGCGAGGTAGGAGTGGCATTTGCGAACTGA---GTAACAGTTTTAGTGTT----
-----------------------------------TTATTTTGGTGCCGTTTTCTTCCACAAACTGCCACCGTCAGATCT
TGATTGTGTAGGGTGTGGAATGTTCACTTAGGAGGTGTTCCTAGCAACCGTTTGT-AGCTAACATTACCGTAAAATTATT
CGACCTTTAAAAGAAGACACC-AATATCTAGTTGACGAAAGCCAGGGGAAGTGGTCCTGACGAACAAGCA----------
------------------------------------------AACCCCTCCCTCTTCACGACAATCCCTAAGACT--CAG
TTGGGCCC--AAAAAACATTTTACTGAAATACAACAAAACTTAAAAAGTGCTACTCGGACCTCATTTTAAATAGCTAAAA
ACGA-----AAAAAATACATAGCGG-------------------TGCCATGACAGAAGC-AATTTTTTTGAAACATATCA
TACGGAAGGAATAAACGAAGAACACGTGGAATTTACGACATGACATGCTTTAGATGATAAAAAAAATTACATGTCATGCT
AATTTATGAACTATATAATTGTCATGGCTGTGAAATAGACTTACCAGAGGAATAGATATAGAGAACACCATTATTTTTTT
CATAAATTGACATGCTAGCTACTATGGCCGTGCTCTAAAAACATGTAAGGGGGACATGCTAGCTTCCTAGGAATAGACAT
AAAATTACCATGGGTACATGTCAAA--
>chr1B_2
-AACCTTGCATAGACTGGCAGCAATGGCGGGATTGTTGATGA-AATAAAGGTTGAGCTTTACCTGTCCTGTGCGTGTGTC
AC--GTTTGGAGTGAGCAAGTGTAGTAGTTGGTGATTTGGCTTGTGGTAATGGTTGGCTGGGAGTGGATTGGCCATCCGA
CGGCGATCCAATGGTGAGGGAGCGATTGTCTGACGGCGATGTGGGTGCGCCTTTGTGGTTTTGTTTGGTTGCAGCGTCTG
GTGAGGGGGTGGGTGGGTGGTTCTGGGCTTGCTTGGCATCTGAACCACCTCTCCCTTCTTCCTGGCCTGTATTTTTTTGC
CGCTGGGTAGTGGTGTGTTCTCTTCTCATCTTTGTTCTGGGTGGAAGGGCGGATTGAGTCCAGCTCCATTTCGCCTCGGA
GTCAA-GGTAATTCTCTTCCATTTCCTCCTGTGAATGCCCGCGC------------------------------------
----------CTTCAGAT----TCATCGGATGCGATGGTCTTTTCAAGTTCTTGC------------------------T
GAATGTGCCTTGTCCTTCTTGAGGCACAAACAAA-TCCAAAGCTTTGTTGATCTAGTTGAGACTTGAGAGTTGAGACAGG
CTGTCATGTTGCATTGCTGTGCTGACTGCGTATGTGTCAGGATTGTGATGATAGGGTTGAAACTTGTTGGGCGTCTGT-G
TTTATATATTCTCGGATTTTTTTTTTGAATGATCGTTAGGG---GAGAGATTGCCCACCCGAATTTGATTTAAAAGTGCC
AAAGCCACAGTTTGACAGCAGCTTTTGGGGGACAGGGGATACAGAGAAGTTTATTTTTTAA----ACTTACACGGAGTAG
TTTACTGTCGTGCTTCTGTGGTTTCGCTCTCGCCAGCGGTTTTCGCATAGAGATTTGTGTCGATGCTGCAAGGTTGCCAG
GATGGCGCTACTGGTCTTTGTGGTTTGACAGGATCGTATCCCGTCAAACGGTATCGTACCGTATAGGATGCGAACATTGA
CAGGCTGTTGATGCTCGATTTTCATGTCTTATTATCTCCAAACTT----AAACAAATCAGCAAAGCAAAGCAAAGCAGCG
ACGAAACTAACCGGGATCCA----TCCCAACCCAAATCGCTGTGGGAGCAGATGGGGGACGTGGCCAAGGACCTGGCCGC
CGGCACGGTGGGCGGCGCGGCGCAGCTGGTCGTCGGCCACCCGTTCGACACCATCAAGGTGAAGCTGCAGAGCCAGCCCA
CGCCGCCGCCCGGCCAGCCGCCCAAGTTCGCCGGCGCCATGGACGCCGTCAAGCAGACCATCTCGGCCGAGGGCCCCCGG
GGCCTGTACAAGGGCATGGGCGCCCCGCTCGCCACCGTCGCCGCCTTCAACGCCGTGCTCTTCACCGTCAGGGGCCAGAT
GGAGGCCCTGCTGCGCTCCGAGCCCGGCGCCGCGCTCACCGTCGGCCAGCAGGTCGTCGCCGGCGCCGGGGCCGGCGTCG
CCGTCTCCTTCCTCGCCTGCCCCACCGAGCTCATCAAGTGCAGGCTGCAGGCGCAGAGCGCGCTTGCCACCGCCGCTCCT
GCCGCCGCCGCTG------------CTCCCGCGGGCGGCGCGGCCGCC--------------------------------
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-------------------------ACCGTGACCGCCACGGC---CGCTGCCGCGGTGAAGTATGGCGGGCCGCTGGACG
TGGCGAGGCACGTGCTGCGGTCGGAGGGCGGCGTGCGGGGCCTCTTCAAGGGCCTCGTCCCCACAATGGCGCGCGAGATC
CCCGGCAACGCGCTCATGTTCGGCGTCTACGAGGCCACGAAGCAGTTCATTGCCGGCGGGCAGGACACGTCGGGGCTGGG
CAGGGGCTCCCTGATCCTCGCCGGCGGGGTCGCCGGCGCGGCGTTCTGGGGATCCGTGTACCCGACCGACGTGGTGAAGA
GCAAGCTCCAGGTGGACGACTTCAAGAACCCAAAGTACTCGGGCTCCATGGACGCGTTCAAGAAGATCCTCGCCGCCGAC
GGGGCCAGGGGTCTGTACAGGGGGTTCGGACCGGCCATGGCGCGCAGCGTCCCGGCCAACGGCGCCTGCTTCCTCGCCTA
CGAGGTGACAAGGTCCCTGCTCTAGGCGACCTGCAGGCTGCTG------------------GCCATTCTTGACTTCGTTC
TTGTTCCTCCACCCTGATGATTCAGTTATCGTCGTCGGGACAGTC--CTGTCTCTGTAACAGAAAACCAAGCCATGTGTG
TGAATCGAACGAAATTTGCATTCCTTTCCTTTTCTTTCTTTCTTTTTGCGAGAAGGCCAAGGTCAT--------------
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-------------------------------------------------------------------ATAT---------
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>chr1D_1151
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-------------GGCGCGGCGCAGCTGGTCGTCGGCCACCCGTTCGACACCATCAAGGTGAAGCTGCAGAGCCAGCCCA
CGCCGCCGCCCGGCCAGCCGCCCAAGTTCGCCGGCGCCATGGACGCCGTCAAGCAGACCATCTCAGCCGAGGGCCCCCGG
GGCCTTTACAAGGGCATGGGCGCCCCGCTCGCCACCGTCGCCGCCTTCAACGCCGTGCTCTTCACCGTCCGGGGCCAGAC
GGAGGCCCTGCTGCGCTCCGAGCCCGGCGCCGCGCTCACCGTCGGCCAGCAGGTCGTCGCCGGCGCTGGGGCCGGCGTCG
CCGTCTCCTTCCTCGCCTGCCCCACTGAGCTCATCAAGTGCAGGCTGCAGGCGCAGAGCGCGCTGGCCACAGCCGCTCCT
GCCGCCGCCGCCG------------CTCCCGCGGGCGGCGCGGCTGCC--------------------------------
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-------------------------ACCGTCACCGCCACGGCCAATGCTGCCGCGGTCAAGTACGGCGGGTCGCTGGACG
TGGCGAGGCACGTGCTGCGGTCGGATGGCAGCA-----------------------------------------------
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-----------------------------------GCGCGGCGGC-----------------------------------
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>chr1D_1151
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-------------GGCGCGGCGCAGCTGGTCGTCGGCCACCCGTTCGACACCATCAAGGTGAAGCTGCAGAGCCAGCCCA
CGCCGCCGCCCGGCCAGCCGCCCAAGTTCGCCGGCGCCATGGACGCCGTCAAGCAGACCATCTCGGCCGAGGGCCCCCGG
GGCCTCTACAAGGGCATGGGCGCCCCGCTCGCCACCGTCGCCGCCTTCAACGCCGTGCTCTTCATCGTCCGGGGCCAGAT
GGAGGCCCTACTGCGCTCCGAGCCCGGCGCCGCGGTCACCGTCGGCCAGCAGGTCGTCGCCGGCGCTGGGGCCGGCGTCG
CCGTCTCCTTCCTCGCCTGCCCCACCGAGCTCATCAAGTGCAGGCTGCAGGCGCAGAGCGCGCTGGCCACAGCCGCTCCT
GCCGCCGCCGCCGCAGCCGCT------CCCGCGGGCGGCGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNACCGTCACCGCCACGGCCAATGCTGCCGCGGTCAAGTACGGCGGGCCGCTGGACG
TGGCGAGGCACGTGCTGCGGTCGGATGGCAGCA-----------------------------------------------
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-----------------------------------GCGCGGCGGC-----------------------------------
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>SNPs
S---------SS------------------S---S---------------------------S----------S------
-S---------------S--------------------------------------------------------------
----------S------------------------------------------------------S--------------
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S--------------------------------S----SS-----S-------------S--------------------
-----S--------------S---S----------------------S-------S--------S----S----S--SSS
SS-SSSS-S-----------------------------------------------------------------------
----------------------------S---------------------------------------------------
-----S---------------------------------------------------------------S--------S-
------------------S-------S-------S-------------------S-------------------------
---------------------------------------------S----S--------SSSSSS---------------
------------------------------------S------S---------------S-------------S------
-------------------------------------------------S------------------------------
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-------------------S------------------------------------------------------------
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-------------------------------------------------------S------------------------
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-----------------------------------------S--------------------------------------
----------------------------S--S--S------SSSSSSSSSSSSSSSSSSSS---------S---------
------------S-----------------------S----------S-S------------------------------
-----------------SSS-S-S--------------------------------------------------------
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-------------S--S---------------S----S-----------S-----SSSS--S-----S--------SSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS---------S--S------S----S---------------S----
-S-------S-S--S---S-S-------------------------------S--S--S-------S-------------
S-----------SS-SSSS--S-------S-S----SS-S----S----S---------------S-SSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS-------------S---------SSS------SSS---
-------SSS-------S----S----S-S--S--------S-----S-------S-----------S----S-------
-SS-SSSSS--------------S-SSSSSSSSSSSSSSSSSSS----------S-S--S--S--S-------SS-S---
---S---SS-S-S------------S--S-------S-----S-----SS---------------S-SS----S------
---------------S-----S-------------S----S------S--------S----SS----S------------
----------------------------SS--------S-----S---S---------------S---------------
--------------S-S-----S--SS
>forward_487
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-------------------------------------------------------------------GATAGTTGGGTGG
GGTTGCA-------------------------------------------------------------------------
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>reverse_3295
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--------------CTGGGACGTTGTTCCTAGCA----------------------------------------------
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