>input_sequence_61935
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-----------------------------------CCATGATAAAGAAACCAATGCACATTAGCAGGAGCAGTATCAAAC
AAGCACATCCTGATCCGTCTGACCTCCTCGTCCAAAGCTA---CCCGAGGCCATGGGGCTCTGCGCGTCGATGCTGCAGC
GGAGGACGGAGAGGCGGTACCCCGAGCCGAGGCGCGGCACGGCGGAGGCGCTGTTCGTCGTCAGAGGCGACCGCCGGCCG
GCGAACCCAGAGGCGCTGGTGGTCCGGGTGCAGGACTCCGGTCGAACACAGCTCCGGAGACATGGCA------GGGAGGA
GAGTGGAGGACG---CGGGGGGTGCTGGCGACAAGGCACCGACGCGCTGGACTGGATGATCGCCCGCGCTCGGATGCCCC
GGCTGCCTTGCGCGGGCACCGGGACCGTCGGGGTCGAGCCGGACGCGGCGTTGCGCACGCGTG-----------------
----AGACGACGGCGGCGGGCCGAGGTGCCCCGCCAGGGCACGGGGTCGAGCCGGATGCGCCGTTGCTCACGCGCAAGAC
GACGGCGGCGGCGGGCCGAGGGGCCCCGCCAGGGACGCGCTGGACGCCACCAACGGCCCCGGTGACGCCGACGCCGCCCT
CGCCGGCCATGACGCCCATGGGCGGGGCGCCGGCGGCACCGAGTACGCCGGCCTCGGCAGCCATGACGCCGGGCCGGCCG
GTGTGGCAGAGGAGGATACTGATGGGTATGCGGTGCGAGCTGCCGCGGTTCAGCGGGCTCGTGCTGTACGACGAGCACGG
CCGGCCCATCCAGGTCGGCACCCCGGGCAGAAGAAACCACCGCCAGGTACGCAGCAGGCAGCCGGGCAGAGTAAGCTTAG
CTCGACAGA--TAGTTAGTAGTTTCTCCTGAGCAATACAGGAGTTCAGATTAATGTACGCTTTTGACCTGTTTTTCTCCA
GGGGAAGAAGAAGACTGCCAGGACATCTTCCACCACAACTCTCAGGGACCTCCTGTAGGCTGT----AGCTAGTTGCGAT
TCATTGACAGAGAAGCTGAACGAATGCTTCTCCGCCGAATGCTCTGCTGTAAAGCGGCAAATACTTCTCATGCGAATATA
TCAATGT-------------------TTGGAGG-----------------------------------------------
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---------------------------------------------
>chr5D_1_TraesCS5D01G263600
ACATTGTCAAACATAGAAAGTAGTGTTTAATGGGCACCAATTATATAGCACTAGAAATACAACCAAGTATTTTAAAAATT
GTATATACTCATGTATAGGAACAAAAAAATCGGTTGCGGTAACGACACCAATATGAACTTTCTTTCCTAGAAAGGAGATT
GAAACCTTGATCTACGCATCAATGTGCACAATCATTTTTTAT-ATTGAAGTTGATACAAAACATCGAGGCCATTACAAGA
TATGAATATACCATCTACGACCAAGTCAGACTTTTTTCTGCAACAAGGACGACAATGTTCCATGTACCATCTTCATGATG
GGTCTTCTGAACCCGAAGACGACACCATGAACATGG--------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------TGACTTGTTTCAAGCTTGTACGCACCTTTGTTTCAAAAAATATATAT---AGTGGAACATTTGTTT
CAAGCTTTCACGTACCTATTGATGCATAGCTAGCAATGCTAAATAACTAATGAAACATATACTTTAGTAGTACGTCAATG
TATAAATAACTAGTGAAACATATACTTTAGTACGTACCTATTGATACATTTGTTTCAAGCTTGTACGTACCTTTGTTCCA
TCATGCAAG---------TTTTCCTTTTGACACATTTCATTAGCATGACAGTTCATATACATAAATAACTAATGAGACAT
ATGCTTTAG-TAGTACGTCAATGTGAAGCCAAATACATCGTGAACCTATTGCTTGTGGCTCCGTACCTATATATATCTTG
AGAGTCCCTTGATCGGAGTTAATGGACAGCCACCGCGAAAAA--AAACCCGACCGACCACGCTAAACACAGATCACTTAT
TTCGCAAGCAACAAGCAATTCTTGTCTTACCCCCGTCGACGAAGCAATTCTATCGACCGAAACCCAGGATTATTCCTTAG
CATCGCGCGGGAGATATCACTCCGATGCAAGGAAGAAAAAAGAAGATTGTTAAACCATCCTTCCTTTTACTTCCCAACCC
AGCTCACTCCATCCCGCTCTA-GCTTGCTCGCCACCCATGATAAAGAAACCAATGCACATTAGCAGGAGCAGTATCAAAC
AAGCACATCCTGATCCGTCTGACCTCCTCGTCCAAAGCTA---CCCGAGGCCATGGGGCTCTGCGCGTCGATGCTGCAGC
GGAGGACGGAGAGGCGGTACCCCGAGCCGAGGCGCGGCACGGCGGAGGCGCTGTTCGTCGTCAGAGGCGACCGCCGGCCG
GCGAACCCAGAGGCGCTGGTGGTCCGGGTGCAGGACTCCGGTCGAACACAGCTCCGGAGACATGGCA------GGGAGGA
GAGTGGAGGACG---CGGGGGGTGCTGGCGACAAGGCACCGACGCGCTGGACTGGATGATCGCCCGCGCTCGGATGCCCC
GGCTGCCTTGCGCGGGCACCGGGACCGTCGGGGTCGAGCCGGACGCGGCGTTGCGCACGCGTG-----------------
----AGACGACGGCGGCGGGCCGAGGTGCCCCGCCAGGGCACGGGGTCGAGCCGGATGCGCCGTTGCTCACGCGCAAGAC
GACGGCGGCGGCGGGCCGAGGGGCCCCGCCAGGGACGCGCTGGACGCCACCAACGGCCCCGGTGACGCCGACGCCGCCCT
CGCCGGCCATGACGCCCATGGGCGGGGCGCCGGCGGCACCGAGTACGCCGGCCTCGGCAGCCATGACGCCGGGCCGGCCG
GTGTGGCAGAGGAGGATACTGATGGGTATGCGGTGCGAGCTGCCGCGGTTCAGCGGGCTCGTGCTGTACGACGAGCACGG
CCGGCCCATCCAGGTCGGCACCCCGGGCAGAAGAAACCACCGCCAGGTACGCAGCAGGCAGCCGGGCAGAGTAAGCTTAG
CTCGACAGA--TAGTTAGTAGTTTCTCCTGAGCAATACAGGAGTTCAGATTAATGTACGCTTTTGACCTGTTTTTCTCCA
GGGGAAGAAGAAGACTGCCAGGACATCTTCCACCACAACTCTCAGGGACCTCCTGTAGGCTGT----AGCTAGTTGCGAT
TCATTGACAGAGAAGCTGAACGAATGCTTCTCCGCCGAATGCTCTGCTGTAAAGCGGCAAATACTTCTCATGCGAATATA
TCAATGT-------------------TTGGAGGTCTTCACTGTAACATTGCGACTTAC---ATTGTTGGGAAAATTGACC
GGCCCGTGGACACTGATGCGGGAGCCGGCCATCTAACCATG-CCCCGAATTATCTGTATTTTTTT-CTTCTAATTCCATA
GCACTC-AAAATAATTATAGAAAATAGCATAATTCATC---AAA-AAAATGCAAATGTCCTTAGTATAACACTAGTTCA-
------------------GGATGTTCAACAAGAATTCATTGATTTTGAATTCAGCGATACTAGAGTCAAAACTGACACAT
GTCATTCCACCCGTAGTTCCTCTTGAGCTTCGCCTCACAA-GTATGAGCGTAAATAGCTTGCCTTCAGCCTTGTAGTACA
GGGCGACAATGCGTCCGGGCTATACAATCTGATGATTATCCAGTTGCAAAATTGAGTGAATCGATAAAATTGACCAACAT
CTAG-------------------------------AACAACAAGAAAGCA----AAACTTATGGGTTGACGAGCCCAGTG
GTCACATTGTCTCCACTCGTGCAATCACATCGCAAAACTTCATGACAACGTTGGAGATGGTGTACCACCA-ATACGT--T
AGTGACTTTGCATTACGTTCATGGATGACGTGCATGTCGTAGGGCGCGGAGTATTTTTTTCTCATGAAACGAAGTATGCA
CGTTTTG-CCAAAAGGCCGAGCCCTT---GTTCATGCCTATAAAGTCCACAAATACAACAAACCACGCATCACACAACAA
CTCATCCTCAATCACCGGTTACCCCGCCATCATGCTTACTCCAGAAAACAACAAGAAGTTCT--ACGAAAAAA--GCTCA
ATGA-CATTTGACGGAAGACCTACGGGAGGTGGTGTCTGCCATGGACGTCATCGGGAGGGGGGCAGATGGTACCTGGCTG
CGGAGGGATTCTGG-TGGACTGCG---------------GGCA-------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------------------------GGCGCGTGGG
TGGGGGCTGTAGATGTTCCAGGATGCCTGGGCAGCGGCCAGAGAGGTACAACGACGGAG------------GATGCAGAT
GAAAGCAAGGGGGAGCAGGGGCAAAATGGAAGAAAAGTGGACTGG
>chr5A_1
ACATTGTCAAACATAGAAAGCAGTGTTTACTGGGCACCAATTACATAGCACTAGAAATACAACCAAGTATTTAAAAAATT
CTATATACTCATGCATAG----AAAAAAATTGGTTGCGGTAATGACACTAGTATAAACTTTCTTTCGTAGAAAGGATATT
GAAATCCCGATCTACGCATCAATGTGCACAATCATTTTTTTATATTAAAGTTGATACAAAGCATCCAGCCGATTACAAGA
TATGAATATACCATCTATGACTAAGTCAGACTTTTCCC-GCAACAAGGACGACAATGTTCCACTTACCATCTTCATGATG
GGTCTTCTCAACCCGGAGACGACACCATGAACATGGAGAAAATATCAGGTGCTACCAGCTCTTATATGCTACCATGATAC
CAAATTCAAAAATTCAAATTTAAACTTGTCAAAAATTCTGAAAAAATCATAAATGTTCACAACATATATGGCGACAATCC
CCTAAAAAATCAGATAAAAAATCGACATACACATAGAGAAACAAAAAAGACAAATCCATGATTAATAGTCTTTTTGTTTC
TCCGTGTATATTTTGAATTTTGATCTAAATATTTTAGTCGTTGTCAACATATATGTCATGAACATCCATGATTTTTTCCA
GATTTTTTTGACAAGTTTAAATTTGAATTTTTTAAATTGGTATCATGGTAGCATATAAGATATGGTATCATCTGATATTT
TCCCATGAACATGGTGACTTGTTTCAAGCTTGTACCTACCTTTGTCTCAAGTTTTTT-TTTTTGAGTGGAACATTTGTTT
CAAGCTTGTACGTACCTATTGATGCATAGCAAGCAATGCTAAATTCCGTCTCGT--------------------------
------------------------------------------------------------------------------CA
TCATGCAAGTTTTCTCTCTTTTCCTTTTGACATATTTCATTGGCATGACAGCTCATG--TATAAATAACTAATGAAACAT
ACTTTAGTTTTAGTACGTCAATGTGAAGCCAAATGCATCGCGAACCTATTGCTTGTGGCTCCGTACCTATAT----CTTG
AGAATCCCTTGATCGGAGTTAATGGACAGCCGCCGCGAAAAAC---ACCCGACCGACCACGCTAAACACAGATCACTTAT
TTCACAAGCAACCAGCAATTCTTGTCTTACCCCCGTCCACGAAGCAATTCTATCAACCAAAACCCGCGATTATTCCTTAG
CATGTCGCGAGAGATATCACTCAGATGCAAGCAAGAAAA-AGAAGATTGTTAAACCTTCCCTCCTTTTACTTCCCAACCC
GGCTCACTCCATCCCGCTCTA-GCTTGCTCGCCACCCATGATAAAGAAACCGATGCACATTAGCAGGAGCAGTATCGAAC
AAGCACATCCCGATCCATCTGAGCTCCTGATTCGAAGCTACCGCCCGAGGCCATGGGGCTCTGCGCGTCGATGCTGCAGC
GGAGGACGGAGGGGCGGTACCCCGAGCCGAGGCGCGGCACGGCGAGGGCGCTGTTCGTCGTCAGAAGCGACCGCCGGCCG
TCGAACCCAGAGGCGCTGGTGGTCCGGGTGCAGGACTCCGGTCGGACACAGCTCCGGAGACATGGCACTGGCAGGGCGGA
GAGTGGAGGACG---CGGGGGGTGCTGGCAGCAAGGCACGGACGCGCTGGACAGGATGATCACTCGCGCTCGGATGCCCC
GGCTGCCTTGCGCGGGCAGCGGGACCGTCGGGGTCGAGCCGGACGCGGCGTTGCGCACGCGTCAGACGGCGTTGCGCACG
CGTCAGACGGCGTCGGCGGAGCGAGGTGCCCCACCAGGGCTCGGGGTCGAGCCGGACGCGCCGTTGTATACGCGCAAGAC
GACGGCGGCGGCAGACCGAGGGGGCCTGCCAGGGCCGCGCTGGACGCCACCAACGGCCCCAGCGACGGCGACGC------
---CGGCCATGACACCCATGGGTGGGGCGCCAGCGGCACCGAGTACGCCGGCCTCGGCAGCCATGACGCCGGGCCGGCCG
GTGTGGCAGAGGAGGATACTGATGGGGATGCGGTGCGAGCTGCCGCGGTTCAGCGGGCTCGTGCTGTACGACGAGCACGG
CCGGCCCATCCAGGTCGGCACCCCGGGCAGAAGGAACCACCGCCAGGTACGCAGCAGGCAGCCAGGCAGACTAAGCTTAG
CTCGACAGG--TAGTTAGTTTCT--TCCTGAGCAATACAGGAGTTCAGATTAATGTACGCTTTTGACCTGTTTTTCTCCA
GGGGAAGAAGAAGACTGCCAGGACATCTTCCACCACAACTCTCAGGGACCTCTTATAGGCTAG----AGCTAGCTGCGAT
TCATTGACAGA----------GAATGCTTCTCTGTCGAATGCTCTGTTGTAAAGCGGCAAATACTTCTCATGCGAGTATA
TCAATGTTCTAGTGTCGAGAAATTGTTTGGAGGCCTTCACTGTAACATTGCAACTTACTACATTGTTGGAAAAATTGATG
ATAGGGCGCGGACG------------------CTGACCATGTCCCCTAATTGTCTGTATTTCTTT---TCTAATTCCGCA
ACACTC-AAAATAATAATAGAAAATAGCACAATTCATCCACTTTTTTTTC---AATATCCCTAGTATAATAATAGTTCA-
------------------GGATGTTC-ACAAGAATTCACTGATTTTGAATTCAGCGGTACTCGAGTCAAAACTGACACAT
GTCGTTTCGTACATAGTTTCTCTTGAACTTCACCTAACAATGTATGAGCGTAAATAGCTCGCCCTTGGTCTTGTAGTACA
GGGTGACAA-GCGTCCAGGCTATACAACCTGATGGTTATCAAGTTGCAAAACTGAGTGAATCAATAAACTGACCAA--CT
TCCTGCCCAAAAAAAAGATCAACATTATGTAGAATAAC-------AAGCA----AAACTTACGGGTTGACGAGCCCGATG
GTCACATTGTCTCCTCTCGTGCAATCACACCACAAAACTTCATGACATCGTTGGAGATGATGTACAACCTGATACGT--T
AGTGACTTTGCATTGCGTTTATAGATGATGTGCATGTCGTTGGGTGCGGAGT-TTTTTTGCTCATGAAATGAAGCCTGCA
CGTTTTG-CCAAAATGTCGAGCCCTT---GTTCATGCCTATAAAGTCCGCAGATACGACAAACCACGCATCACACAACAA
CTCATCATCAATAACCGAGTACACCGCCATCGTGCTTACTCCAGAAAACAACAAGT-----TCAAC-AAAAAA--GCTCA
ATAA-CATTTGACTAAAGACCTGTCGGGCGTGGTGTCTGCCGTAGACGGCGTCGAGAGGGGG-CGGATGATACCTGGCTG
CAGAGGGATCCTGGGTGGACCGCA---------------TGTA-------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------------------------GGCGCGTGGG
TGGGGGCTGTAAACGTCTGAGGATGCCTGGGCGGCGACCGGAGAGGTACAACGGCGGAT------------GGTGCAGAT
GAAAGCAAGGGGGAGCAAGGGTGGAGTGGAAGAAAAGTGGACTGG
>chr5B_4
---TTGTCAAACATAGAAAGTAGTGTTTACTGGGCACCAATTATATAGCACTAGAAATACAACCAAGTATTTTAAGAATT
GTATATATTAATGTACAGAAACAAAAAAACT-GTTGCGATAACGACACCAATATGAACTTTCTTTCCTAGAAAGGAGATT
GAAACCCCGATCTACACATCAATGTGCACAATCATTTTTTATTATGAAAGTTGATACAAAGCATCGAGCCCATTACAAGA
TATGAATATACCATCTATGACTAAGTCAGACTTTTTCC-ACAACAAGGACGACAATGTTCCACTTACCATCTTCATGATG
GGTCTTCTGAACCCGGAGACGACGCCAC----------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------GAACATGGTGACTTGTTTCAAGTTTGTATGTACCTTTCTTTTAAGCTCTTCCTTTTTGAGTGGAACATTTGTTT
CAAGCTTGTACATACCTGTTGATGCATAGCTAGCAATTTTAAATTCCATCTCGT--------------------------
------------------------------------------------------------------------------CA
TCATGCAAG---------TTTTCCTTTTGACACATTTCATTAGCATGACAGTTCAGATATATAAATAACTAATGAAACAT
ACTTTAGT---AGTACGTCAATGCCAAGCCAAATGCATTGTGAACCTGTTGCTTGTGGCTCCGAACCTATAT----CTTG
AGAATCCCTTGATCGGAGTTAATGGACAGCCACCGCGAAAAAAAAAACCCGGCCGACCACGCTAAACATAGATCACTTAT
TTCACAAGCAACAAGCAATTCTTGTCTTACCCCCGTCCACGAAGCAATTCTATCGACGGAAACCCACGATTATTCTTTAG
CATCGCGTAGGAGATATCACTCCCATGCAAGGAAGAAAAAAGAAGATTGTTAAACCTTCCTTCCTTTTACTTCCCAACCC
AGCTCACTCCATCGCGCTCTAAGCTTGCTCGCCACCCATGATAAAGAAACCAATGCAGATTAGCAGGAGCAGTATCACAC
AAGCACATCCTGATCGATCTGAACTACTCACCCAAAGCTA---CCCGAGGCCATGGGGCTCTGCGCGTCGTTGCTGCAGC
GGAGGACGGAAAGGCGGTACCCCGAGCCGAGGCGCGGCACGGCGAAGGCGCTGTTCGTCGTCAGAGGCGACCGCCGGCCG
TCGAACCCAGATGCGCTGGTGGTCCGGGTGCAGGACTCCGGTCGAACACAGCTCCGGAGACATGGCA------GGGAGGA
GTGTGGAGGAGGACACGGGGGGTGCTGGCGACAAGGCACCAACGCGCTGGACTGCATGATCACCCGCGCTCGGATGCCCC
GGCTGCCTTGCGCCGGCACCGGAACCGTCGGGGTCGAGCCGGACGCAGCGTTGCGCACGCGTG-----------------
----AGACGACGGCGGCGGGCCGAGGTGCCCCGCCAGGGCTCGGGGTCGCGCCGGACGCACCGTTGTATACGCGCAAGAT
GACGGCCGCGG---ACGGAGGGTCCCCGCCACGGACGCGTAGGACGCCACCAACGGCCCCGGTGACGCCGACGCTGCCCT
CGCCGGCCATGACACCCATGAGCGGGGCACCGGCGGCACCGAGCACGCCGGCCTCGGCAGCCATGACGCCGGGCCGGCCG
GTGTGGCAGAGGAGGATACTGATGGGGATGCGGTGCGAGCTGCCGCGATTCAGCGGGCTCGTGCTGTACGACGAGCACGG
CCGGCCCATCCCGGTCGGCACCCCGGGCAGAAGAAACCACCGCCAGGTACGC---AGGCAGCCAGGCAGAGTAAGCTTAG
CTCGACAGGAGTAGTTAGTTTCT--TCATGAGCAATGCCGGAGTTCAGATTAATGTACGCTTTTGACCTGTTTTTCTCCA
GGGGAAGAAGAAGACTGCCAGGACATCTTCCACCACAACTCTCAGGGACCTCCTATAGGCTAGCAGCAGCTAGTTGCGAT
TCATTGACAGAGAAGCTGAACGAATGCTTCTGTGTCGAATGCTCTGTTGTAAAGCGGCAAATACTTCTCATGCGAATATA
TCAATGTTCTAGTGTCGAAAGATTGTTTGGAGGTCTTCACCGTAACATTGCAACTTAC---ATTGTTGGAAAAATTGATG
AGAGGGCGCGGGTCCTGATG------GGCCATCTAACAATGCCCCCTAATTGTCCGCATATTTTTCCTTCTAATTTCGCA
ACACTC-AAAATAACTATAGAAAATAACA---------------------------------------------------
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>chr5B_2014
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-----------------------------------------------TGTAAAGCGGCAAATACTTCTCATGCGAGTATA
TCAATGTTGTAGTGTCGAAAAATTGTTTGGAGGTCTTCACTGTAACATTGCAACTTAC---ATTGTTGGGAAAATTGATT
GGCCCGTGGACACTGATGCGGGAGCCGGTCATCTAACCATG-CCCCTAATTATCTGTATTTTTTT-CTTCTAATTTCGTA
ACACTC-AAAATAATTATAAAAAATAGCAGAGTTCATCCAAAAA-AACATGCAAATGTCCTCAGTATAACAATAGTTCA-
------------------GGATGTTCAACAAGAATTCATAGATTTTGAATTCAACGGTACTAGAGTCAAAACCGACACAT
GTCATTCCACCCATAGTTCCTCTTGAGCTTCACCTCACAA-GTATGAGCGTAAATAGCTTGCCTTCAGCCTTGTAGTACA
AGGCGGCAACGAGTCCGGGCTATACAACCCGATGATTATCTAGTTGCAAAATTGAGTGAATCAATAAAATTGACCAACAT
TTAG-------------------------------AACAACAAGAAAGCA----AAACTTATGGGTTGATGAGCCCGGTG
GTCACATTGTCTCCACTCGTGCAATCACATCGCAAAACTTCATGACAACATTGGAGATGGTGTACCACCA-AAACGT--T
AGTGACTTTGCATTACATTCATGGATGACGTGCATGTCGTAGGGCGCAGAGTATTTTTTTCTCATGAAACGAAGCTTGCA
CGTTTTG-CCAAAAGTCCGAGCCCTT---GTTCATGCCTATAAAGTCCACAAATACAACAAACCACGCATCGCACAACAA
CTCATCCTCAATCACCGATTACCCCGCCATCATGCTTACCCCGGAAAACAACAAGAAGTTCT--AC-AAAAAA--GCTCA
ATGAACATTTGACGAAAGANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGGGCGCGTGGG
TGGGGGCTGCAGATGTTCCAGGATGCCTGGGCAGCGGTCAGAGAGGTACAACGACCGAG------------GATGCAGAT
GAAAGCAAGGGGGAGCAGGGGCAGAGTGGAAAAAAAGTGGACTGG
>chr3D_2109
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----CGTGGACATTGATGCGGGAGCCGGCCATCCAACCCTATTCTCTAACTGTCCGCCTGTTTGTA----TAAGACCGCA
CCACTCAAAAATAATTATAGAAAATGACACGATTCATTCATAAATAACATGCAAATATCCCTAGTATAACAATAATTCAA
ATGTAAATAGAGATAATTGGATGTTCAACAAGTT--------TTTTGAATTCAGCGATACTAGAGTCAAAAGCGGCACAT
GTCGTCCCACACATACTAACTCTTGAGCTTCATCCGACAACGTATGTGCGTGAATGGCCTGCCCCCGGTCCCCTTGTACA
TCTTTGCAGCACGTGGAGTCTATAAAATGTGTAGAGAC----------ATATTGAGTGAATGAATGAATTAACCAA--C-
--------------------------ATGTAGGGCAATAGAAACCAAAACTTACGATCC--TTGGTTGA------CGATG
CCTATATTGTCTTCACTCGTGCAACTGCACCACAAAACTTCATCACGGAGTTGCAGATGGTGTACCATCA-ATGTGG--T
ATCGACTTTACATTGCGTTGATGGATGACGTGCATGTCGTAGGGCACGAACT-TCTTTCAG-CATGATATAAAGCATGCA
CGCACTG-CCAAAAAATCGAGCCCCTTGAGTTCGTGCCTACAAATTGTGCAGATACGACCAACCACGCATCACACAACAA
CTCATTTTCGGACAACGAGTACCCCGCCATCGTGCTTACTCTAGAAAACAAAAAAAAGTTCA--AC-AAAAAA--GCTCA
ATGA-CATTTAAGAGAACACCTATTGGGCGTGGTGTCCGCCATGTACGTTGTTGGCAGGGTGGTGGAGGGTACCTGGCTG
CGAAGGGATCCT--------------------------------------------------------------------
--------------------------------------------------------------------------------
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---------------------------------------------
>chr4D_2270
--------------------------------------------------------------------------------
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-------------------------------GAATTCATCGATTTCAAATTCGACGATACTTGTGTAAGAATCCGCACAT
GTCGTTCCACACACTATGTCCCTTGACCTTCATTCAACAACGTATGAACGTAAATGGCCCGCCCTTGGCTCTATGGTACA
ACACGACATCGCGTCCGGGCTATAAAATGTGATGATTGTCAAGTTGCAACACTGAATGAATCAATGAATTGGCCAA--CT
ATAG-------------------------------AGCAACAATCAAAACTAACAATCTTCTTGGTTGATGAGCCCGGTG
GCCACCTTCTCTCCACTTGTGCAATCACACCGCAATACTTCATGACG-CATTGGAGATTGTGTATCACCG-ATGGGCTAT
AGTGACTTCACATTATGTTTATGAATCATGTGCAAGTCGTAGGGTGCAAAGT-GCTTTTGCTTGTGAAATGAAGAACACA
TGTTTTG-GTAAAAGGTGGACCCCCCTTGCCTCATGCCTACAAAGTCCACATATACGACCAACCACGCATCACACAACAA
CTCATCCTCCATCATCGAGTACCCCGCCATTGTGCTTACTCCAGGAAAGAACAAGAGGT------A-AAAAAAAAGCTCA
ACAG-AATTTGACCGACCACCTGCCGCGCGTGGTGTCTGCGATGGACGACATCGGCAGGGGG-TGGAGGGTACCCGGCTG
TGGA----------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------
>chr4B_2270
--------------------------------------------------------------------------------
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-------------------------------GAATTCATCGATTTCAAATTCAATGATACTCGTGTCAGAATCCGCACAT
GTCGTTCCACACACTATGTCCCTTGACCTTCATTCAACAATGTATGAACGTAAATGACCCGCCCTTGGTTCTATGGTACA
ACACGACATCGCGTCCGGACTATAAAACGTGATGATTATCAAGTTGCAACACTGAATGAATCAATGAATTGGCCAA--AT
GTAG-------------------------------AGCAACAAGAAAAACTAACGATCTTCTTGGTTGATGAGCCA----
----------------TTGTGCAATCACACCGCAATACTTCATGACG-CATTGGAGATTCTGTATCACCG-ATGGGC--T
AGTGACTTCACATTATGTTCATAAATCATGTGCAAGTCGTAGAGTGCAAAGT-GCTTTTGCTTGTGAAATGAAGAACACA
TGTTTTG-GTAAAAGGTCGACCCCCCTTGCTTCATGCCTACAAAGTCCACAAATACGACCAACCACGCATCACACAACAA
CTCATCCTCCATCGTCGAGTACCCCGTCATTGTGCTTACTCCAAGAAAGAACAAGAGGT------A-AAAAAA--GCTCA
ACGG-AATTTGACCGACCACCTGCCGTGTGTGGTGTTCGCGATGGACGACATCGGCAGGGAG-CGGAGGGTACCTG----
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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---------------------------------------------
>chr2D_2444
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----------------------------------------------CAACATTGAGTGAATGAATAAATTAATCAA--C-
--------------------------ATGTAGACTAACAGGAAGCAACACTTACGATCTCGATGGTTGACGAGCCCAATG
GCCACCTTGTCTCAACTTGGTGAATCACACTGCAAAACTTCATGACGGAGTTGCAGATGGTGTACCGCCG-GTGTGT--T
AGCGACTTCATATTGTGTGCATGGATGACATGCATGTTGTAGGGCACGAAGT-TCTTTCGCTCATGAAACAAAGCATGCA
ATTTTTTTCCAAAAGGTCGGGCCCTT---GTTCATGCTTACAAAGTCCTCATAAACGGCCAACCACGCATCACACAACAA
CTCATCCTCGTAC-ACGAGTACCCCGCCATCCTGATT-CTCTAGAAAACAATAAGT-----T--AA-AAAAAA--GCTCA
ATGG-CATTTGATCGAACACCTGACGAGCGCGGTGTCCGCCATGGATGGTGTTGTCAGGGATGTAGAGGGAT--------
--------TCCTGGGTGGACAACGACGTTGTCCAAGGTCGACA-------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------------------------GTCAGGTGGG
TGCGGTCTGCGGACGTCCGAAGATGCCTGGGCGGCGGCCACAGAGGTACAACGACGACGACAGATGATGACGATGCGGAT
GAAAGGAAGGGGGAGCAGGGGTGGACTGGAAGAAAA---------
>SNPs
-----------------------------S--------------------------------------------------
------------------S-----------S-------------------------------------------------
------SS--------------------------------------S-------------S-------S-----------
-----------------S---S--------------S-S-----------------------SS----------------
---------------S----------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------S-------------SSSS-S-S-S--------------------
-------SS-----------------------------------SS-SSS-SSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS--
-----------------------------------------------------------S---------------S----
-SSS-SSSS-------------------------S-------------------------------------SSSS----
---S----------------------------------------------------------------------------
---S---------------------------------S----------------------------S-------------
--------------------------------------------------------S-----------------------
--------------------------------------------------------------------------------
----------------S-----S------S--------------------------------------------------
--------------------------------------------S-----------------------------------
S-------------------------------------------------------------------------------
-------------------------------------------------------------S------------------
--------------------------------------------------------------------------------
----------------------------------------S---------------S---------SSS-----------
------------S-S-----------------------------------------------------------S-----
-------------S------------------------------------------------------------------
--------------------------S-----------------------------------------------------
---------------------------------------------------------------S----------------
--------S----------SSS-SS-------------------------------------------------------
------------------------------------------------------S------SS-----------------
--------------------------------S-S-----------S---------------------------------
---------------------------------------------------S--------------------------SS
----------------------------------------------S------------------------------S--
S----------------------------S-----------------S-----------------------S--------
--------------------------------------------------------------------------------
------------S------------------S------------------------------------------------
---------S------------------------------S---------------------S-----------------
S-------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------S-----
--------------------------------------------------------------------------------
-----------------S------------------------------------------------S-------------
------------------------S--SS---------------------------------------------------
---------S----------S-----------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------S-S-------------------
>forward_1238
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------------------TTCTTGTCTTACCCCCGTCG------------------------------------------
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---------------------------------------------
>reverse_2890
--------------------------------------------------------------------------------
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---------TGCGTCCGGGCTATACAATC---------------------------------------------------
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