>input_sequence_61868
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----------------------------------------------------------------------ATGGCGTCGT
CGTGGGCGCTTCTGGCAGCGGTGCTGCTGGCGACCCACGGCGTGGCGGCGGTGTCTGGCGCCCGGGCGGCGGCGGACGCT
ACACGGCTGCCGTCGTCGGGGCCGGGGTTCCGGGAGGCGCCCGCGTTCCGGAACGGCGACGGGTGCCCGCCGCGGGGGGC
GGGGGAGCGCGTGCACATCGCCATGACGCTGGACGCCAACTACCTGCGCGGCACCGTCGCGGCCGTCTTCTCCATCCTGC
AGCACACGGCGTGCCCGGAGGACGTGTCCTTCCACTTCCTGGCGGCGCGGCGGCGGGAC------GCCGACGCCGTGCGC
GCCACGTTCCCGTACCTGGACCCCAGCGTGTACCTCTTCGACCCGGCCCGCGTCAGCGGCCGCATCTCCCGCTCCGTGCG
CCACGCGCTGGACCAGCCGCTCAACTACGCGCGCATCTACCTCGCCGACACGCTGCCCCGCGCCGTGCGCCGCGTCATCT
ACCTCGACTCCGACGTGGTGGTCGTGGACGACGTGCGCAAGCTCTGGTCCGTGGACCTCGACGCCGGCGGCGGCCACGTG
GTGGCGGCGCCCGAGTACTGCCACACCAACTTCACCAAGTACTTCACCGACGCCTTCTGGTCGGACCCGCGGCTCAGCGC
CACGTTCCGGCAGGGCCCGCATCGGCGCCGGCGGCCGTGCTACTTCAACACGGGCGTGATGGTGATCGACGTGGCGCGGT
GGCGCGCGGGGGGATACTCGCGGCGGGTGGAGGAGTGGATGGCGATCCAGAAGGAGGAGAA---GCGGATCTACAGCCTG
GGGTCGCTGCCGCCGTTCCTGCTGGTGCTCGCCGGGGAGATCATGCCGGTGGACCACCGGTGGAACCAGCACGGGCTCGG
CGGGGACAACGCGGAGGGGAGGTGCCGGAGCCTCCACCCGGGCCCCATCAGCCTGCTGCACTGGAGCGGGAAGGGGAAGC
CGTGGCTGCGGCTCGACACCCGGAAGCCGTGCACCGTCGACTACCTCTGGGAGCCCTACGACCTCTACAAGGCCGCCGCG
GCCACCGCGATCGAGGAGTGA-----------------------------------------------------------
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>chr2D_1_TraesCS2D01G142400
ATCAAGCTGCTGCAACCGTTGCAAGGCCGCCATAGTTTTGTGGCGCAAACAACAACACTGGGAGCGACAACACAAACAAC
TCCGTGCTGCCTGCCGCGGTGAAATCCCTGGTGCACCGGCGCACTTCCCATGAAGCGGAGAACATATCCCACTGTCACCG
TCTTCG---------TGCCCGCTGAAGGCTACCGATGACGGCAAGAGGGAGGAGGAGCTGGCCGGGAAGGTATGGTCCCC
GCCCATGTCGCCATGGTCGAGATTTCTACCCACATTTGAATTTTCATGAAGAAATGACATCCATTGTGTGTATGAAAAAA
AA-AGACAAAATAGTGTTCTAAAAAGCTTCAATTTTGAAAGCATTTTACCCAGAGCTGTGAACAGCTAGCCCGCTGCCTG
CCAACCACCGGTGCGGCGCATGCACGCCACGCTGGCGGCAACGTGCGTGATGGAGCCCCTCGATCGTCCTCCACGCGC-A
AAACACAAGCTGGCCGGAGCACGGATGGACGGACGGAGTACCACCCAACACGAAACGTACCTGCACACCTACACCCGCTC
CTTCCTCCCGGATTCCCTTCTGATTTTCCCTCTGTAAAAAAACGTGGGTCGCGCACCGACATCGTCGGTCGA--------
----GGCAATCATCGCCCCTGTCCGATGTCCTTTCTCTGCACACCTGGAGTTGAAAGGCGTACTATATAATCTGATGCGC
ATGTGGTCATGTGCCGTTGCGTGATCCGAGTACAGAGTGCCGCTGTCGGTCGCCGCCGTCGTCTCCATTGCCATTGCCAA
AGGAGGCTCTAGCTCGCGTGTGCCTCCTACCCTA-----CCGGCCTCTAGTCCTGCTCCTGCCCCGGCAAGCTGCCAGGT
TACTCGGCTAATCCTCGCTCGCCTCCTCCTCCCTCTCACC-GGGCACGGTCCCGGCGTCCTAGCTAGCCACCCTTCCCGT
GTGCGCCGGCGTACAGTCCTTGTCGCCGCGCTCA-CCCGCCGCGCGCGCGTTCTGGTGGTGCGAAGCGCGATGGCGTCGT
CGTGGGCGCTTCTGGCAGCGGTGCTGCTGGCGACCCACGGCGTGGCGGCGGTGTCTGGCGCCCGGGCGGCGGCGGACGCT
ACACGGCTGCCGTCGTCGGGGCCGGGGTTCCGGGAGGCGCCCGCGTTCCGGAACGGCGACGGGTGCCCGCCGCGGGGGGC
GGGGGAGCGCGTGCACATCGCCATGACGCTGGACGCCAACTACCTGCGCGGCACCGTCGCGGCCGTCTTCTCCATCCTGC
AGCACACGGCGTGCCCGGAGGACGTGTCCTTCCACTTCCTGGCGGCGCGGCGGCGGGAC------GCCGACGCCGTGCGC
GCCACGTTCCCGTACCTGGACCCCAGCGTGTACCTCTTCGACCCGGCCCGCGTCAGCGGCCGCATCTCCCGCTCCGTGCG
CCACGCGCTGGACCAGCCGCTCAACTACGCGCGCATCTACCTCGCCGACACGCTGCCCCGCGCCGTGCGCCGCGTCATCT
ACCTCGACTCCGACGTGGTGGTCGTGGACGACGTGCGCAAGCTCTGGTCCGTGGACCTCGACGCCGGCGGCGGCCACGTG
GTGGCGGCGCCCGAGTACTGCCACACCAACTTCACCAAGTACTTCACCGACGCCTTCTGGTCGGACCCGCGGCTCAGCGC
CACGTTCCGGCAGGGCCCGCATCGGCGCCGGCGGCCGTGCTACTTCAACACGGGCGTGATGGTGATCGACGTGGCGCGGT
GGCGCGCGGGGGGATACTCGCGGCGGGTGGAGGAGTGGATGGCGATCCAGAAGGAGGAGAA---GCGGATCTACAGCCTG
GGGTCGCTGCCGCCGTTCCTGCTGGTGCTCGCCGGGGAGATCATGCCGGTGGACCACCGGTGGAACCAGCACGGGCTCGG
CGGGGACAACGCGGAGGGGAGGTGCCGGAGCCTCCACCCGGGCCCCATCAGCCTGCTGCACTGGAGCGGGAAGGGGAAGC
CGTGGCTGCGGCTCGACACCCGGAAGCCGTGCACCGTCGACTACCTCTGGGAGCCCTACGACCTCTACAAGGCCGCCGCG
GCCACCGCGATCGAGGAGTGAGCCGCCGCCGC---CGCCGCGGTCGAGGAATGAGCCGCCATGACCAGTCGATCGGTTCG
ACTGAGAGCTGGCACTGGTCGAGCTGAGAGGCAGGCAGATCGAAGAGGAAACACGACGTATCATACGGGCGCGAGGATCG
GAGAGCAAGTTTGTCATTCGGGA-------GAGCTCGAAGAA--------------------------------------
-TTTTGCGAGGGAAGCAGAGGGGATCGAATTCCCATTTTTT---------------------------------------
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---------------------------------------------------------------------------TTCTT
GGGGGTGGTCATCGTGCAATTGACATTTCTGCCCTTGGATTGTATATATATATACAGGACACGTCACACGTGGGTGGGTC
GGGCCGCAGGTTTTGTACTCCAGC--------------------------------------------------------
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--------------------------------------------------------------------AAATGTGTACAT
GTATACGTGCGAATGTACTAGGTACAGTGTCGACG--------CGATAATTCATACGTTTCTTTCTCGAAAATGTGAGGT
TTGTTCTCCTCTGATTTAAAGCAGAAACCGGGTGGACTACAAATAGAGCATCTCCAAGAGGCGCCCAAAAACTGGGCCGC
GTACTAAATTTTAGGTTTTTTGACGTCGGATAGCTCCAACAAAAGCTGTAAAACAGTGCGCGCGTAAAAAAAATTTAGAC
GCGCGCTGAAAAATGCTATCAAAACCAGTAAATTTGAGGCGCCGGATTGCGCGCGCTTCACAATTTACACTGCGTGTTCT
ATTAGCCGCACGTTTTGGGCATCTGCTAAGAGCATCTCCAACAGCCGCCCAACGCGTGGCGTGCTAAAAATCAGTTTGCA
GCACGCCGATCGCCTACTTTAACGCAGCGGGAGCGCTGGCTCCAGCGGCCGCAATAAATTTAGCGCGCGCGTAGCTCCAG
GAGGCGCGCTAAAATGCAGCGCGCGCGAGCAGCCGGCGCATGCCATATGTTGCATTTTGGACACAAAATGAATTTCAAGC
ATCAAAACAAAGACATGACATAATTTAAATCATAGAAACAAGTTCATGATGACATAAAAGTTCATGCCCACAAGTTCAAA
TTCATGCCCACAAGTTCAAAATCTGAACCAAGTTCA
>chr2A_3
--CAAGCTGCTGCCAACGTTGCAAGGCCACCATAGTTCCGTGGCGCAAACA---------------ACAATACAAACAAC
GCCACGTCGCCTCCCGCAGTGAGATCCCTAGCCCACCGGCGCACTTCACACGAAGCGGAGAACATATCCCACCATCACCG
TTTTCGCGCAGGCTTTGCCCGACGAAGGCTACCG-----GGCAAGAGGGAGGAGGAGCTGGCCGGGAAGGTATGGTCCCC
TCCCATGTCGCCCTGGTCGAGAGTTCCACCCACATTTGAATTTTCGTGAAGAAATGACATCCGTTGT--GTATGAAAAAA
AG-GGACAAAATAGTGTTCTAAAAAGATTCAATTTTGAAAGCATTTCACCCAGAGCTGTGAACAGCTAGCTCGCCGCCTG
CCAACCACCGGTGCGGCGCATGCACGCCACGCTGGCCGCAACGTGCGTGATGGAGCCCCTCGATCGTCCTCCACGCGCAA
ACACACAAGCTGGCCGGAGCTCAGATGGACGGACGGAGTACCACCCAACACGAAACGTACCTGCACACCTACACCCGCTC
CTTCCTCCCGGATTCCCTTCTGATTTTCCCTCTGTAAATAAACGTGGGAAGCGCACCGACATCGTCGGTCGTCACGCACA
AGCGGGCAATCATCGCCCCTGTCCGATGTCCTTTCCCTGCACACCTGGAGTTGAAAGGCGTAGTATATAATCCGATGCGC
ATGTGGTCATGTGCCGTTGCGTGATCCGAGCACAGAGTGCCGCTGTCGGTCGCCGCCGTCGTCTCCATTGCCATTGCCAA
GGGACGCTCTAGCTCGCGCGCGCCTCCTACCCTGC--------------------------CCCCGGCAAGCTGCCAGGT
T--------TCTCCTCGCTCACCTCCTCCCCCCTCTCACCGGGGCACGGTCCCGGCATCCTAGCCAGCCACCCTTCCCGT
GCGCGCCGGCGTGCAGTCCTTGTCGCCGCGCTCA-CCCGCCGCGCGCGCGTTCTGGTGGTGCGAAGCGCGATGGCGTCGT
CGTGGGCGCTTCTGGCAGCGGTGCTGCTGGCGACCCACGGCGTGGCGGCGGTGTCTGGCGCCCGGGCGGCGGCGGACGCT
ACACGGCTGCCGTCGTCGGGGCCGGGGTTCAGGGAGGCGCCCGCGTTCCGGAACGGCGACGGGTGCCCGCCGCGGGGGGC
GGGGGAGCGCGTGCACATCGCCATGACGCTGGACGCCAACTACCTCCGCGGCACCGTCGCGGCCGTCTTCTCCATCCTGC
AGCACACGGCGTGCCCGGAGGACGTGTCGTTCCACTTCCTGGCGGCGCGGCGGCGGGAC------GCCGACGCCGTGCGC
GCCACGTTCCCGTACCTGGACCCCAGCGTGCACCTCTTCGACCCGGCCCGCGTCAGCGGCCGCATCTCCCGCTCCGTGCG
CCACGCGCTGGACCAGCCGCTCAACTACGCGCGCATCTACCTCGCCGACACGCTGCCCCGGTCCGTGCGCCGCGTCATCT
ACCTCGACTCCGACGTGGTGGTCGTGGACGACGTGCGCAAGCTCTGGTCCGTGGACCTCGACGCCGGCGGCGGCCACGTG
GTGGCGGCGCCCGAGTACTGCCACACCAACTTCACCAAGTACTTCACCGACGCCTTCTGGTCGGACCCGCGGCTCAGCGC
CACGTTCCGGCAGGGCCCGCACCGGCGCCGGCGGCCGTGCTACTTCAACACGGGCGTGATGGTGATCGACGTGGCGCGGT
GGCGCGCGGGGGGGTACTCGAGGCGGGTGGAGGAGTGGATGGCGGTGCAGAAGGAGGAGAA---GCGGATCTACAGCCTG
GGGTCGCTGCCGCCGTTCCTGCTGGTGCTCGCCGGCGAGATCATGCCGGTGGACCACCGGTGGAACCAGCACGGGCTCGG
CGGGGACAACGCGGAGGGGAGGTGCCGGAGCCTCCACCCGGGCCCCATCAGCCTGCTGCACTGGAGCGGGAAGGGCAAGC
CGTGGCTGCGGCTCGACACCCGGAAGCCGTGCACCGTCGACTACCTCTGGGAGCCATACGACCTCTACAAGGCCGCCGCC
ACCACCGCGATCGAGGAGTGAGCTGCCGCCGCCGCCGCCGCGGTCGAGGAATGAGCCGCCATGACCAGTCGATCGATTCG
ACTGAGAGCCGGCACTAGTCGAGCTGAGAGGCAGGCAGATCGAAGAGGAAACACGACGAACCATACTGGCGCGAGGATCG
GAGAACAAGTTTGTCGCTCGGGA-------GTTCTCGAAGAATTTTATCGGATGTCCCCGAAGGGACGAGTGCTCGAAGA
ATTTTGCGAGGGAAGCAGAGGGGATCGAATTCCCATTTTTTCTTC-----------------------------------
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---------------------------------------------------------------------------TTCTT
CGGGGTGGTCATCGTGCAATTGACATTTCTGCCCTTGGATTGTATATAC--ATACAGGACACGTCACACGTGGGTGGGTC
GGGCCGCAGGTTTTGTATTTTTTTTTGCAATGGCGCAGGTTTTGTATTTTTTATGGTAATACGTGTCTCATTCATATCAT
AAAAAACAAAGTACAAGTCACGTAAAGACCGACATGACAAAACTGAAAAAATAGCAGAACATCTCTGAGCTTGACATCAA
CGCCCGTCACCTACCTCCGGCACCACCATAGTAGCCACCGAAGAAAAGAATGACGAATCATCTTCTCATCCGAACTCGAC
GCGGCTCCATCGCTGTATGCAGCTTTGCGGACCTTCAAGGTTTTGTACTCGACCAGAGGTGTATGCATAAATGCGTATAT
GTATACGTGCGAATGTACTAGGTACAACATTGAGTCGTTGACTCGATAATTCATGTACGTTTTTTTCTCTAATGAGAGGT
TTTCCA-CCTCTGATTT---------------------------------------------------------------
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>chr2B_67
------------------------------------------------------------------ACAATACAAACAGC
GCCACGCCGCCTCCCGCAGTGAGATCTCTGGCCCACCGGCGCACTTCCCACGAAGCGGGGAACATATCCCACAGTCACCG
TCTTCGCGCGGGCTTTGCCCGCCGAAGGCTACCGGCGACGGCAAGAGGGAGGCGGCGGCGGCCGGGAAGGTATGGTCCCC
GCCCATGCCGGCATGGTCGAGAGTTCTACCCACATTTGAATTTTGGCCAAGAAATGGCATCCGTTGT--GTATGAAAAAA
AGAAGACAAAATAGCGTTCTAAAAAGCATCAATTTTGAAAGCATTTTACCCAGAGCTGTGAACAGCTAGCCCGCTGCCTG
CCAACCACCGGTGCGGCGCATGCACGCCACGCTGGCCGCAACGTGCGTGATGGAGCCCCTCGATCGTCCTCCACGCGCAA
ACACACAAGCTGGCCGGAGCACGGACGGACGGGCGGAGTACCACCCAACACGAAACGTACCT--------ACACCAGCTG
CTTCCTCCCGGATTCCCTTCTGATTTTCCCTCTGTAAATAAACGTGGGTCGCGCACCGACATCGTCGGTCGA--------
----GGCAATCATCAACCCTGTCCGATGTCCTTTCCCTGCACACCTGGAGTTGAAAGGCGTACTATATAATCCGATGCGC
ATGTGGCCATGTGCCGTTGCGTGATCCGAGCACAGAGTGCCGCTGTCGGTCGCCGCCGTCGTCTCCATTGCCATTGCCAA
AGGAGGCTCTAGCTCGCGCGCGCCTCCTATCCTACCCTGCCGGCCTCCAGTCCCGCTCCTACCCCGGCAAGCTGCCAGGT
T--------AATCCTCGCTCACCTCCTCCACCTT-TCACC-GGGCACGGTCCCGGCATCCTAGCTAGCCACCCTTCCCGT
GCGCGCCGGCGTACAGCCCTTGTCGCCGCGCTCACCCCGCCGCGCGCGCGTTCTGGAGAAAA-AAGCGCGATGGCGTCGT
CGTGGGCGCTTCTGGCCGCGGTGCTGGTGGCAACCCACGGCGTGGCGGTGGTGTCTGGCACCCGGGCGGCGGCGGACGCT
ACACGGCTGCCGTCGTCGGGGCCGGGGTTCAGGGAGGCGCCTGCGTTCCGGAACGGCGACGGGTGCCCGCCGCGGGGGGC
GGGGGAGCGCGTGCACATCGCCATGACGCTGGACGCCAACTACCTCCGCGGCACCATCGCCGCCGTCTTCTCCATCCTGC
AGCACACGGCGTGCCCGGAGGACGTGTCCTTCCACTTCCTGGCGGCGCGGCGGCGGGAC------GCCGACGCCGTGCGC
GCCACCTTCCCGTACCTGGACCCCAGCGTGTACCTCTTCGACCCGGCCCGCGTCAGCGGCCGCATCTCCCGCTCCGTGCG
CCACGCGCTGGACCAGCCGCTCAACTACGCTCGCATCTACCTCGCCGACACGCTGCCCCGCGCCGTGCGCCGGGTCATCT
ACCTCGACTCCGACGTGGTGGTCGTCGACGACGTCCGGAAGCTCTGGTCCGTGGACCTCGACGCCGGCGGCGGCCACGTG
GTGGCGGCGCCCGAGTACTGCCACACCAACTTCACCAAGTACTTCACCGACGCCTTCTGGTCGGACCCGCGGCTCAGCGC
CACGTTCCGGCAGGGCCCGCACCGGCGGCGCCGGCCGTGCTACTTCAACACGGGCGTGATGGTGATCGACGTGGCGCGGT
GGCGCGCGGGGGGCTACTCGAGGCGGGTGGAGGAGTGGATGGCGATCCAGAAGGAGGAGAA---GCGGATCTACAGCCTG
GGGTCGCTGCCGCCGTTCCTGCTGGTGCTCGCCGGCGAGATCATGCCGGTGGACCACCGGTGGAACCAGCACGGGCTCGG
CGGGGACAACGCGGAGGGGAGGTGCCGGAGCCTCCACCCGGGCCCCATCAGCCTGCTGCACTGGAGCGGGAAGGGGAAGC
CGTGGCTGCGGCTCGACACCCGGAAGCCGTGCACCGTCGACTACCTCTGGGAACCCTACGACCTCTACAAGGCCGCCGCC
GCCACCGCGATCGAGGAGTGAGCCGCCGCA---GCCGCCGCGGTCGAGGAATGAGCCGCCATGACCAGTCGATCGATTCG
ACTGAGAGCTGGCACTAGTCGAGCTGAGGGGCAGGCAGATCGAAGAGGAAACACGACGTATCATACTGGCGCGAGGATCG
GAGAACAAGTTTGTCACTCGGGACTCGGGAGAGCTCGAAGAA--------------------------------------
-TTTTGCGAGGGAAGCAGAGGGGATCGAATTCCCATTTTTTCTTGGGGGTGGTCATCATGCAATTGACAGTTCTGCCCTT
GGATTGTATATATATATACAGGACACGTCACACGTTGGTGGGTCGGGCCGCAGGTTTTATACTTTTTTTTCATGTAGCTA
ACCATCTCAATCGTCATCTAAATATTATCATGATCTTCCTTTTTTGTTTAGCCTAGCAAAGGTCAATTTGTTTCTTCTTT
TCAAAAAGTAAATTTTGTTGTCTGAAGTTCGTTTGGAACACTAATTAGGAATTTACTATCAGTTCACAGCTTCTTAATTA
TCTATAGCCTACTCTGCCACGTAGTTATCGTGTCAATTTGTTCCTCAGGTTGTCGTTTGCTCATTGTTGTCCTGGTTGTG
CTTCTTCCTTCTGATAATGCACTACTCCTTAGCTTCTTTCTTTCCATTTCTTGTGAGTCCTGAGTTTTGCATATGTTGCT
GCCTCTGAAATTGATAGTATGTGCTTTTTTTGCTTGGTATAATTTGGCGGGTGTATTTTCTGGTTCTAGGCCTACTTTTG
TGTATGGTTTAGCTGTCTGCATATACCATGGGTTGTGTGCTTGTGTGATGATGATGATGTTGGCATGGTTTATTGTCTAT
TCTTTCCACTAGATTAGCTTACAATCAGATTGGAGTAGTGGAGATAAGAGCATCTCCAATAGCATGTGTATATTTGGATG
TCTATATATTCATATAGACAATGGTCTAAAAAGATTCTCTCATATACACATCCAGTTTTGCATCAGAACGTCTATATGCA
GGGACCATGACAGGTGGGCCGTTGCTAGGGAGAGGAAGAAATCATGACTACAACTGAGTTTAGACAACGTCTTCACATTG
TCCAGGCGTGGACATTGTCGAGGTCGATTTAGAGGACGTGTATATTTGGACAACCATATAGACAAGCTGTTGGACGCCTA
TTTTGGGCTCGCGTCGTGGAAAACGAGTATAGACATCCATATAGACAAGCTATTGGAGATGCTCTAAGGCCCTTCCCAGT
GCTCCACCGTGGACAGGTGCTAAGTATGCTACATAAGCAAAAAAGTGACATGGCATAACATTTAAGGAGGGGAGAGAGTA
CTTTGGTGACCCCAGAAAGAACCAATGCCAAGCGCGAGAACCTAGGAAAACCACTTAAATGAAACAATTTGGCGCGAGGA
TCGGAGAACAAGTTTGTCACTCGGGAGAGCTCGAAGAATTTCGCGAGGGAAGCAGAGGGGATCGAATTCCATTTTTTCTT
GGGGGTGGTCATCATGCAATTGACAGTTCTGCCCTTGGATTGTATATAT--ATACAGGACACGTCACACGTTGGTGGGTC
GGGCCGCAGGTTTTGTACT-------------------------------------------------------------
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>chr4D_1117
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--------------------------GTTCCGCGAGGCGCCCGCCTTCCGAAACGGCGCCGAGTGCGCCGGCGGTGACAA
G---------GTGAACGTCGCCATGACGCTGGACGCTAACTACCTCCGCGGCACCATGGCCGGCGTGCTCTCCATCCTGC
AGCACACAGCGTGCCCGGAGAACGTGGTGTTTCACTTCCTCGCCGCCCGGACGGACGGTGACCTCGTCGCCATGCTGCGC
GCGACCTTCCCTTACCTGGACCTCCGCGTGTACCGATTCGATCCGTCGCGCGTCCGGGGACGTATCTCCCGGTCCATCCG
CCACGCTCTGGACCAGCCGCTCAACTATGCGCGCATCTACCTTGCCGACACGCTTCCCCCCGACGTGCGCCGGGTGATCT
ACCTCGACTCCGACGTGATCGTCGTCGATGACATCCGCACGCTCTTCTCCGTGGACCTCG---------CGGGCCACGTA
GTGGGCGCACCGGAGTACTGCCACGCCAACTTCACCAACTACTTCACGGACACATTTTGGATGGACCCGGCGCTCAGCGG
GACGTTCCACGGG---------------CGGCGCCCGTGCTACTTCAACACCGGCGTGATGGTGATGGACGTGGACCAGT
GGCGCACCGGCGGGTACACGAGGCGGGTGGAAGGGTGGATGGCCGTGCAGAAGCAGAAGA------GAATCTACCACCTC
GGCTCTCTGCCGCCGTTCCTTCTGGTGCTCGCCGGGGACATCCAGGCCGTGGACCACCGGTGGAACCAGCACGGGCTCGG
CGGCGACAATGTCAAAGGGCGGTGCCGGGGCCTGCACCCGGGACCCATCAGCCTGCTGCACTGGAGCGGCAAGGGAAAGC
CGTGGCACCGGCTCGATGCCCGGCGGCCGTGCACGGTCGACTACCTCTGGGCGCCCTACGACCTCTAC------------
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>chr4A_1177
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------GCTCGTCCACATCGCCATTACTCTGGACGAGGGCTACCTGAGGGGCTCGGTCGCCGCCGTCCATTCCGTGGTCC
AGCACGCCATGTGCCCGGAGAGCGTCTTCTTCCACTTCCTCGTCTCCGACCCCAG------CCTGGGCGACCTCGTCCGC
GCCGTCTTCCCGCAGCTCCGGTTCAAAGTCTACTACTTCGACCCCGCGCGCGTCCGGGGGCTCATCTCGTCGTCGGTGCG
CCAGGCGCTGGAGGAGCCGCTCAACTACGCCCGCAACTACCTCGCCGACCTCCTGGAGCCCTGCGTGCGCCGCGTCATCT
ACCTCGACTCCGACCTCGTGCTCGTCGACGACGTGGCCAAGCTCTGGCGCACCGACCTCG---------GCGGCCGCACC
GTCGGCGCGCCGGAGTACTGCCACGCCAACTTCACCAAGTACTTCACCGACCGGTTCTGGTCGGAGGAGCAGTTCGCCGG
GACGTTCGAGGGC---------------AGGCGGCCGTGCTACTTCAACACGGGCGTGATGGTGCTGGACCTGGCGCGGT
GGCGGCGCGCGGGCTACACCCGGCTTATCGAGCGGTGGATGGAGATACAGAAGTCGGCGCCCGGGCGCATCTACGAGCTG
GGGTCGCTGCCGCCGTTCCTGCTGGTGTTCGCGGGGCACGTGGCGGCGATCGAGCACCGGTGGAACCAGCACGGCCTGGG
CGGCGACAACATCCTGGGCAGCTGCCGCGACCTCCACCCGGGGCCGGTGAGCCTGCTGCATTGGTCGGGGTCCGGCAAGC
CGTGGGCGCGGCTGGGCGGCGGGCGGCCGTGCCCGCTGGACGCGCTCTGGGCGCCGTTCGACCTGTAC------------
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>chr4B_1180
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---------CGTCCACATCGCGATTACTCTGGACGAGGGCTACCTGAGGGGCTCGGTCGCCGCGGTCCATTCCGTGGTTC
AGCACGCCATGTGCCCGGAGAGCGTCTTCTTCCACTTCCTCGTCTCTGACCCGAG------CCTGGGCGACCTCGTCCGC
GCCGTGTTCCCGCAGCTCCGGTTCAAAGTCTACTTCTTCGACCCCGCGCGCGTCCGGGGGCTCATCTCGTCGTCGGTGCG
GCAGGCGCTGGAGGAGCCGCTCAACTACGCCCGCAACTACCTCGCCGACCTCCTGGAGCCCTGCGTGCGCCGCGTCATCT
ACCTGGACTCCGACCTCGTGCTCGTCGACGACGTGGCCAAGCTCTGGCGCACCGACCTCG---------GCGGCCGCACC
GTCGGCGCGCCGGAGTACTGCCACGCCAACTTCACCAAGTACTTCACCGCCCGGTTCTGGTCGGAGGAGCAGTTCGCCGG
GACGTTCGAGGGG---------------AGGCGGCCGTGCTACTTCAACACGGGCGTGATGGTGCTCGACCTCGCGCGGT
GGCGGCGCGCGGGCTACACGCAGCGCATCGAGCGGTGGATGGAGATACAGAAGTCGCCGCCTGGGCGCATCTACGAGCTG
GGGTCGCTGCCGCCGTTCCTGCTGGTGTTCGCGGGGCACGTGGCGGCGATCGAGCACCGGTGGAACCAGCACGGCCTCGG
CGGCGACAACATCCTGGGCAGCTGCCGCGACCTCCACCCGGGGCCGGTGAGCCTGCTGCATTGGTCGGGGTCCGGCAAAC
CGTGGGCGCGGCTGGGCGGCGGGCGGCCGTGCCCGCTGGACGCGCTCTGGGCGCCGTTCGACCTGTAC------------
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>chr4A_1181
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----------GTGAACGTCGCCATGACGCTGGACGCTAACTACCTCCGCGGCACCATGGCCGGCGTGCTCTCCATCCTGC
AGCACACAGCGTGCCCCGAGAACGTGGTGTTTCACTTCCTCGCCGCCCGGATGGACGGTGACCTCGTCGCCATGCTGCGC
GCGACCTTCCCTTACCTGGACCTCCGCGTGTACCGATTCGATCCATCGCGCGTCCGGGGACGTATCTCCCGGTCCATCCG
CCACGCGCTAGACCAGCCGCTCAACTACGCGCGCATCTACCTTGCCGACACGTTTCCCCCCGACGTGCGCCGGGTGATCT
ACCTCGACTCCGACGTGATCGTCGTCGACGACATCCGCACGCTCTTCTCCGTGGACCTCG---------CGGGCCACGTG
GTGGGCGCACCGGAGTACTGCCATGCCAACTTCACCAACTACTTCACGGACACATTTTGGATGGACCCGGCGCTCAGCGG
GACGTTCCACGGG---------------CGGCGTCCGTGCTACTTCAACACCGGCGTGATGGTGATGGACGTGGACCAGT
GGCGCACCGGCGGGTACACGAGGCGGGTGGAAGGGTGGATGGCCGTGCAGAAGCAGAAGA------GGATCTACCACCTC
GGCTCTTTGCCGCCCTTCCTTCTGGTGCTCGCCGGAGACATCCAGGGCGTGGACCACCGGTGGAACCAGCACGGGCTTGG
CGGCGACAATGTCAAAGGGCGGTGCCGGGGCCTGCACCCGGGACCCATCAGCCTGCTGCACTGGAGCGGCAAGGGAAAGC
CGTGGCACCGGCTCGATGCCCGGCGGCCGTGCACCGTCGACTACCTCTGGGCGCCCTACGATCTCTAC------------
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>chr4B_1181
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----------GTGAACGTCGCCATGACGCTGGACGCTAACTACCTCCGTGGCACCATGGCCGGCGTGCTCTCCATCCTGC
AGCACACAGCGTGCCCGGAGAACGTGGTGTTTCACTTCCTCGCCGCCCGGATGGACGGTGACCTCGTCGCCATGCTGCGC
GCGACCTTCCCTTACCTGGACCTCCGCGTGTACCGATTCGACCCGTCGCGCGTCCGGGGACGTATCTCCCGGTCGATCCG
CCATGCGCTAGACCAGCCGCTCAACTACGCGCGCATCTACCTTGCCGACACGCTTCCCCCTGATGTGCGCCGGGTTATCT
ACCTCGACTCCGACGTGATCGTCGCCGACGACATCCGCACACTCTTCTCTGTGGACCTCG---------CGGGCCACGTG
GTGGGCGCACCGGAGTACTGCCACGCCAACTTCACCAACTACTTCACGGACACATTTTGGATGGACCGGGCGCTCAGCGG
AACATTCCACGGG---------------CGGCGCCCGTGCTACTTCAACACCGGCGTGATGGTGATGGACGTGGACCAGT
GGCGCACCGGCGGGTACACGAGGCGGGTGGAAGGGTGGATGGCCGTGCAGAAGCAGAAGA------GAATCTACCACCTC
GGCTCTCTGCCGCCGTTCCTTCTGGTGCTCGCCGGGGATATCCAGGCCGTGGACCACCGGTGGAACCAGCACGGGCTAGG
CGGCGACAATGTCAAAGGGCGGTGCCGGGGCCTGCACCCGGGACCCATCAGCCTGCTGCACTGGAGCGGCAAGGGAAAGC
CCTGGCACCGTCTCGATGCCCGGCGGCCGTGCACCGTCGACTACCTCTGGGCGCCCTACGACCTCTAC------------
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>chr4D_1360
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-----------------------------------CTTCGACCCCGCGCGCGTCCGGGGGCTCATCTCGTCGTCGGTGCG
GCAGGCGCTGGAGGAGCCGCTCAACTACGCCCGCAACTACCTCGCCGACCTCCTGGAGCCCTGCGTGCGCCGCGTCATCT
ACCTGGACTCCGACCTCGTGCTCGTCGACGACGTGGCCAAGCTCTGGCGCACCGACCTCG---------GCGGCCGCACC
GTGGGCGCGCCGGAGTACTGCCACGCCAACTTCACCAAGTACTTCACCGACCGGTTCTGGTCGGAGGAGCAGTTCGCCGG
GACGTTCGAGGGC---------------AGGCGGCCGTGCTACTTCAACACCGGCGTGATGGTGCTCGACCTGGCGCGGT
GGCGGCGCGCGGGCTACACCCGGCGCATCGAGCGGTGGATGGAGATACAGAAGTCGCCGCCTGGGCGCATCTACGAGCTG
GGGTCGCTGCCGCCGTTCCTGCTGGTGTTCGCGGGGCAGGTGGCGGCGATCGAGCACCGGTGGAACCAGCACGGCCTGGG
CGGCGACAACATCCTGGGCAGCTGCCGCGACCTCCACCCGGGGCCGGTGAGCCTGCTGCATTGGTCGGGGTCCGGCAAGC
CGTGGGCGCGGCTGGGCGGCGGGCGGCCGTGCCCGCTGGACGCGCTCTGGGCGCCCTTCGACCTGTAC------------
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>SNPs
SS-----------S-S------------S--------SS------------SSSSSSSSSSSSSSS----S---------
S--SS--S----S----S----S--------SS-----------------S---------------------S-------
----------------------S-----------SS--------------------------------------------
----------------------S----------------------S----------------S----SS-----------
-S------------------------------------------------------------------------------
------------------------------------S-------------------------------------------
-S------------------------------------------------------------------------------
--------------------------------------S-----------------------------------------
-----------------------------------S------------------------------------S-------
------------------------------S-------------------------------------------------
------------------S-S--------------------------S-----S------S-------------------
-SSSSSSSS-----------S--------S--------------------------S-----------------------
-S------------------------------------------------------------------------------
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---------------------S----------------------------------------------------------
-------------S------------------------------------------------------------------
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-------------------------------------------------------------------------------S
---------------------------------------------------------------------------S----
----------------S-------------------------------------------------S-------------
----S-----------S---------------------------------------------------------------
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-------------------------------------------------SS-----------------------------
-------------------SSSSS--------------------------------------------------------
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-------------------------------------------------------------------------S---S--
--------------------------SSS-S--SS-------------------SSSSS-S---S--SSS----S-----
--SSSSS----------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
>forward_57
-------------------------------------TTGTGGCGCAAACAACAACA-----------------------
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>reverse_2156
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---------------------------------------------------------------------------GTTCG
ACTGAGAGCTGGCAC-----------------------------------------------------------------
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------------------------------------
