>input_sequence_61819
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--------------------------------------------ATGGCAAAAGGTACCCT-------------------
--------------------------------------------------ATTGCCTCTTTTT-CAATTTTCGGTGATTG
CTTACCAAGCAAAGCAAGCCGCTTGGTGTACCCTATTGCCTCTGTTTTCCAAACTTTTGAATTTCAT-AAGTCCAAGCAA
AATGTAAAATCTACTTTTGGATACTAATTCATACGCATGAATCTAAGTATTCAATCTAAATATTTCTAAGATATCAATAG
TCAAAATTTGAAATTA-GACTCTATCCTTGACGATA------------------------------------------TT
CTTAGATGCTATCAAAT---------------------------------------------------------------
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------------------------------------------------------------TAATCTAACTATTTGTACAT
ATGATCACACTAAAATTTCAAAAGTTAGATTGTGCTCATTGGGATATACAAATATTTTTGAGAAGTTTTAAATTGAAGAT
ATTC--ATAGCTGCAGCTCAATCCATATTTCAATTCAGACATCAAAATTTCATCTCCTTTATATCATTATAATAAATACC
GTCTG---------------------------------------------------------------------------
GCATGCAGGAGGAATCAACCAG----------------------------------------------------------
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------------------------------CTTACAAGGAGCCTTGCTACAGAATGGGCCCAGAACAAGATCCGGGTGAA
CTGTGTCGCCCCTAGCGCGACTAAGACCGACATGTTAAACAGTGTACGCACCATCAGGTTCTA----CATGAAAATATGT
TATAGAAATGAATAGGTTGAACTGCTTTACATAAGTAGTTATATGA-------TGTACTCCCTCCATTTTTAAATATAAG
TCTTTTTACAGATTTCAATATGAACTACATATGGATGTATATGACGTAGTTTAGAGTGTAGATTCATTCATTTTGCTCCA
TATGTAGTCCATATTGGAATATCTTAAAAGACTTATATTTAGGAACGGAGGGAGTATATGCAATAGAATACTCTTTTACT
ATCGTTTTCGAGGAAACAATTTAACT-AAGCCAACTGATATTGCTGCCACGCATGGCAAAATGTCGACAACTGATCACTA
TACCT-------------------GGAGATCATAGAAAACGAGTTGGCCAGGACTCCGATGCGGCGAGCAGGCGAGCCAG
CCGAGGTGGCGATTGTGGTGTCATTTCTATGTATGCCGGCGGCATCCTTCGTCACCGGCCAAGTCATCACCGTCGATGGT
GGTAGGACCATTAGTGGTTAG-----------------------------------------------------------
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>chr1D_1_TraesCS1D01G391900
CCGGTGAAAACCGAGCCGATGGCGGGTGATGGCGGCGTTCTGACCCACTCGTATTACTCCAGGGGAAACCCTAGGATCTG
GTGCTCCAGACCGGACGATGGCGGCACTGCGGTGTCGTTTCTCTCTTGGAAGCATCGTT-TTGTGGAGCAGCGATGGAAG
TCAGAGGCAGGAGGTGGAGCGGCTTCGTCTTGCACGGAGCTTCGGTGGAGATGTCAAGTCATGCCTGACCGACAGGTGCT
ACGCTTGGTCATGCCTGGTCGGCAGGTGCTACGCACGACAGATCCTCCAAGGGCTTCAAGCTGTGTCGGCTGGTGGTACT
TGGCAGCATGACGCTGAGGTGTATCAGTGACGACCGCGACTGTGTTCAGTTGTTTGCGCGCAGGGAGGAGGTGACGTTGG
GCGCCGTGATGGCGTCGACGATAGCTGGACCGAGCAAGGTTGATGCATCAGTACAGTTCTGAAGATGGAGCGGTGGCAGT
TGGCGGCGGCGGCCTCTGGGAGCACGCCGGATCAGTGTGTGCCCCGGACCCGGCAAATGGCTAGGTTGGGGTCTCAGGTC
TTAGATGTTAGGCTTGGCTGCGATATCTGTTTGGTATTAGGCTCAGACTATCTACGCACCTTCATCAATTGAATAGGTGT
AGCGACAGTTTGTTACTTAGACGGTGGCTTTAGTCTTACTGTTATATGACTTTGTAAGGTCTTGTGAGAATAATTAATAA
AGTGGCCGTATGCATCGCCCAGATGCAGAGGCCGGGGATAATCCTTCTTTAAAAAAAATGCTATGCAGGTGAACAACGCG
GCGCAGATTGTTGCCAAGGTGAGCGTGGAGTGGACATC---GGAGTACTCACACCTGATGGCGACCAACTAAGAGTCGTA
CTTCCACCTCAGCCAGCTCGCGCACCCTTTCCTCCTCAACGCCTCCGTCGCCGGAGCAGGTAGCATCGTCAACATATCCT
CCCATGCCGGCTCACTTGGCTTCCCTGGCCTCGCGCTCTACAGTATGGCAAAAGGTACCCT-------------------
--------------------------------------------------ATTGCCTCTTTTT-CAATTTTCGGTGATTG
CTTACCAAGCAAAGCAAGCCGCTTGGTGTACCCTATTGCCTCTGTTTTCCAAACTTTTGAATTTCAT-AAGTCCAAGCAA
AATGTAAAATCTACTTTTGGATACTAATTCATACGCATGAATCTAAGTATTCAATCTAAATATTTCTAAGATATCAATAG
TCAAAATTTGAAATTA-GACTCTATCCTTGACGATA------------------------------------------TT
CTTAGATGCTATCAAAT---------------------------------------------------------------
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------------------------------------------------------------TAATCTAACTATTTGTACAT
ATGATCACACTAAAATTTCAAAAGTTAGATTGTGCTCATTGGGATATACAAATATTTTTGAGAAGTTTTAAATTGAAGAT
ATTC--ATAGCTGCAGCTCAATCCATATTTCAATTCAGACATCAAAATTTCATCTCCTTTATATCATTATAATAAATACC
GTCTG---------------------------------------------------------------------------
GCATGCAGGAGGAATCAACCAG----------------------------------------------------------
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------------------------------CTTACAAGGAGCCTTGCTACAGAATGGGCCCAGAACAAGATCCGGGTGAA
CTGTGTCGCCCCTAGCGCGACTAAGACCGACATGTTAAACAGTGTACGCACCATCAGGTTCTA----CATGAAAATATGT
TATAGAAATGAATAGGTTGAACTGCTTTACATAAGTAGTTATATGA-------TGTACTCCCTCCATTTTTAAATATAAG
TCTTTTTACAGATTTCAATATGAACTACATATGGATGTATATGACGTAGTTTAGAGTGTAGATTCATTCATTTTGCTCCA
TATGTAGTCCATATTGGAATATCTTAAAAGACTTATATTTAGGAACGGAGGGAGTATATGCAATAGAATACTCTTTTACT
ATCGTTTTCGAGGAAACAATTTAACT-AAGCCAACTGATATTGCTGCCACGCATGGCAAAATGTCGACAACTGATCACTA
TACCT-------------------GGAGATCATAGAAAACGAGTTGGCCAGGACTCCGATGCGGCGAGCAGGCGAGCCAG
CCGAGGTGGCGATTGTGGTGTCATTTCTATGTATGCCGGCGGCATCCTTCGTCACCGGCCAAGTCATCACCGTCGATGGT
GGTAGGACCATTAGTGGTTAGTCAATTAAGAGTACCTTGCGAATAAACTCCTGTGTGTGTTGATCACAAAGAGCGACAAA
ATCCAACAATCCAAAGACATTTCGTGGTACGTAGGCAGATCGAAAAGCATGTGTAACAGCGTGAGGTAACTTTTTTATTG
AAGTGAAAGAAAGGCAATCCGTATAAATAATGGCTACATGGGTGTTAATTAGTTGTTACTAGGATTTTTTTTCTTAAACG
CGGCTTTGCCCTTTTCTATT-AGTTAACCTTGTATTTCCTATGCAT--ATATCTCTAATCGTTGGGATGAAATACACGAA
CATGATTTTTTGGACAAAAGATATGATTTTATTCATTAATTAAATAAAATCACAACAAAGTAGAGCGCACACAAAGAGCA
AAGATCATTGGTACAACCAAAAGTTACATAAAAAATTTCGAAGTGAAGTCCTTACCTCTGGCCTGGCTCTATGAACACTC
CCACGAGGTCCACGACACGACACGCCACCCTGCCTAATTCCGCCAGTCCTCCCTGTCTACTTATGCTTGATATCGCTCTC
TTCTCTCGGCCCCTTCATTGTTGGCCGGGATGATCCAGTTATCACACCACTCCCGCCAACCGGACCACTCCCATGCGTTC
CCAGCCACGCCATCCCTCCTCCTCATGAACGTGAACATGCTGTCGCGCCTCCTCTCCTCCGCACATAGCTCTGGCCGGTT
GACGCCATTGACGCACACAAGGTGTTACCTCTTTTATTCTTAGATAGTATGCTACCTCTTTTTGTTTTCTTTTTCCCCAG
CAATTAGATCATGTTTAAATGAGTAAGGACGTTGGCGTTGTTCAATGACATTGGTGTCAATGAAAAATCATCCGAGGAGG
AATGTTTATGATCCATTACCCGAAGGATGGTCATGAAATCCTTGAGGATGATGATGATTTGGGCATGGTGGCTCTTTTGC
TTGCGGAGATGGACGAGGGCAACAACCGAAAGCATGCATGTTCTCAACCGGGGTGTGTTATGAT
>chr1D_42
-----------------------------------------GACCCACTCGTATTGCTCCGGGGGAAACCCTAGGATCTG
GTGTTCCAGACCGGACGATGGCGGCACTGCGGTGTCGTTTCTCTCTTGGGAGCGTCGTT-TTGTGGAGCAGTGCTGGAAG
TCAGAGGCAGGAGGTGGAGCGGCTTCGTCTTGCACGGAGCTTCGGTGGAGATGTCAAGTCATGCCTGACCGACAGGTGCT
ACGCTTGGTCATGCCTGGTCGGCAGGTGCTACGCACGAGAGATCCTCCAAGGGCTTCAAGCTGTGTCGGCTGGTGGTACG
TGGCAGCATGGCGCTGAGGTGTATCAGTGGCGACCGCGAC-GTGTACAGGTGTTTGCGCGCAGGGAGGAGGTGCCGTTGG
GCACCGTGGTGGCGTCGACGATAGCTGGACCGAGCAAGGTTGATGCATCAGTACAGTTCTGAAGATGGAGCGGTGGCAGT
TGGCGGCGGCGGCCTCTGAGAGCACGCCGGACCAGTGTGTGTCCCAGACCCGACAAGTGGCTAGGTTGGGGTCTCAGGTC
TTAGATGTTAGGCTTGGCTGCGATGTCTGTTTGGTATTAGGCCCAGGCTATCTGCGCCCCTTCATCAACTGGATAGGTGT
AGCGACAGTTTGTTGCTTAGACGGCGGCTTTAGTCTTACTGTTGTATGACTTTGTAAGGTCTTTTGAGAATAATTAATAA
AGTGGACGTATGCATCGCCCAGATGCAGAGGCCGGGGGTCATCCTCCTTTTCTAAAAAAA--------------------
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>chr2D_42
-----------------------------------------GACCCACTCGTATTGCTCCGGGAGAAACCCTAGGATCTG
GTGTTCCAGACCGGACGATGGCGGCACTGCGGTGTCGTTTCTCTCTTGGGAGCATCGTT-TTGTGGGGCAGCGCTGGAAG
ACAGAGGCAGGAGGTGGAGCGGCTTCGTCTTGCACGGAGCTTCGGTGGAGATGTCAAGTCATGCCTGACCGACAGGTGCT
ACGCTTGGTCATGCCTGGTCGGCAGGTGCTACGCACGACAGATCCTCCAAGGGCTTCAAGCTGTGTCGGCTGGTGCTACT
TGGCAGCATGGCGCTGAGGTGTATCAGTGGCGACCGCGAC-GTGTTCAGCTGTTTGCGTGCAGGGAGGAGGTGCCGTTGG
GCGCCATGGTGGCGTCGACGATAGCTGGACCGAGCAAGGTTGATGCATTAGTACAGTTCTGAAGATGGAGCGGTGGCAGT
TGGCGGCGGCGGCCTTTGAGAGCACGCCGGACCAGTGTGTGCCCCAGACCCGGCAAGTGGCTAGGTTGGGGTCTCAGGTC
TTAGATGTTAGGCTTGGCTGCGATGTCTGTTTGGTATTAGGCCCAGGCTATCTGCGCCCCTTCATCAACTGGATAGGTGT
AGCGACAGTTTGTTGCTTAGACGGCGGTTTTAGTCTTACTGTTGTATGACTTTGTAAGGTCTTGTGAGAATAATTAATAA
AGTGGCCGTATGCATCGCCCAGATGCAGAGGCCGGGG-TCATCCTTCTTT------------------------------
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>chr5D_42
-----------------------------------------GACCCACTCGTACTGCTCCGGGGGAAACCCTAGGATCTG
GTGTTCCAGACCGGATGATGGCGGCACTGCGGTGTCGTTTCTCTCTTGTGAGCATCG-T-TTGTGGAGCAGTGCTGGAAG
TCAGAGGCAGGAGGTGGAGCGGCTTCGTCTTGCACGGAGCTTCGGTGGAGATGTCAAGTCATGCCTGATCGACAGGTGCT
ACGCTTGGTCATGCCTGGTCGGCAGGTGCTACGCACGACAGATCCTCCAAGGACTTCAAGCTGTGTCGGCTGGTGGTACT
TGGCAGCATGGCGCTGAGGTGTATCAGTGGCGACCGCGAC-GTGTTCAGCTGTTTGCGCGCAGGGAGGAGGTGCCGTTGG
GCGCCGTGGTGGCGTCGACGATAGCTGGACCGAGCAAGGTTGATGCATCAGTACAATTCTGAAGATGGAGCGGTGGCAGT
TGGCGGCGGCGGCCTCTGAGAGCACGCCGGACCAGTGTGTGCCCCAGACCCAGCAAGTGGCTAGGTTGGGGTCTCAGGTC
TTAGATGTTAGGCTTGGCTGCGATGTCTGTTTGGTATTAGGCCCAGGCTATCTGCGCCCCTTCATCAACTGGATAGGTGT
AGCGACAGTTTGTTGCTTAGACGGCGGCTTTAGTCTTACTGTTATATGACTTTGTAAGGTCTTGTGAGAATAATTAATAA
AGTGGCCGTATGCATCGCCCAGATGCAAAGGCCGGGGGTCATCCTCCTTTTCTAAAAAAAA-------------------
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>chrUn_42
-----------------------------------------GACCCACTCGTATTGCTCCGGGGGAAACCCTAGGATCTG
GTGTTCCAAACAGGACTATGGCGGCACTGCGGTGTCGTTTCTCTCTTGGGAGCATCGTT-TTGTGGAGCAGCGCTGGAAG
TCAGAGGCAGGAGGTGGAGCGGCTTCGTCTTGCACGGAGCTTCGGTGGAGATGTCAATTCATGCCTGACCGACAGGTGCT
ACGCTTGGTCATGCCTGGTCGGCAGGTGCTACGCACGACAGATCCTCCAAGGGCTTCAAGCTGTGTCGGCTGGTGGTACT
TGGCAGCATGGCGCTGAGGTGAATCAGTGGCGACCGTGAC-GTGTTCAGCTGTTTGTGCGCAGGGAGGAGGTGTCGTTGG
GCGCCGTGGTGGCGTCGATGATAGCTGGACCGAGCAAGGTTGATGCATCAGTACAGTTCTGAAGATGGAGTGGTGGCAGT
TGGCGGCGGCGGCCTCTGAGAGCACGTCGGACCAGTGTGTGCCCCAGACCCGGCAAGTGGCTAGGTTGGGGTCTCAGGTC
TTAGATGGTAGGCTTGGCTGCGATGTCTGTTTGGTATTAGGCCCAGGCTATCTACGCCCCTTCATCAACTGGATAGGTGT
AGCGACAGTTTGTTGCTTAGACGGCGGCTTTAGTCTTACTGTTGTATGACTTTGTAAGGT-TTGTGAGAGTAATTAATAA
AGTGGCCGTATGCATCGCCCAGATGCAGAGGCCGGGGGTCATCCTCCTTTAAAAAAAA----------------------
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>chr7D_42
-----------------------------------------GACCCACTCGTATTGCTCCGGGGGAAACCCTAGGATCTG
GTGTTCCAGGCCGGACGATGGCGGCACTGCGGTGTCGTTTATCTCTTGGGAGCGTCGTT-TTGTGGAGCAACGCTGGAAG
TCAGAGGCAGGAGGTGGAGCGGCTTCGTCTTGCACGGAGCTTCGGTGGAGATGTCAAGTCATGCCTGACTGACAGGTGCT
ACGCTTGGTCATGCCTGGTCGGCAGGTGCTACGCACGACAGATCCTCCAAGGGCTTCAAGCTGTGTCGGCTGGTGGTACG
TGGCAGCATGGCGCTGAGGTGTATCAGTGGCGACCGCGAC-GTGTCCAGCTGTTTGCGCGCAGGGAGGAGGTGCCGTTAG
GCGCCGTGGTGGCGTCGACGATAGCTGGACCGAGCAAGGTTGATGCATCAGTACAGTTCTGAAGATGGAGCGGTGGCAGT
TGGCGGCGGCGGCCTCTGAGAGCACGCCGGACCAGTGTGTGCCCCAGACCCGGCAAGTGGCTAGGTTGGGGTCTCAGGTC
TTAGATGTTAGGCTTGGCTGCGATGTCTGTTTGGTATTAGGCCCAGGCTATCTGCGCCCCTTCATCAACTGGATAGGTGT
AGTGACAGTTTCTTGCTTAGACGGCGGCTTTAGTCTTACTGTTGTATGACTTTGTAAGGTCTTGTGAGAATAATTAATAA
AGTGGCCGTATGCATCGCCCAGATGCAGAGGCCGGGGGTCATCCTCCTTTTCTAAAAAAAA-------------------
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>chr4D_42
-----------------------------------------GACCCACTCGTACTGCTCCGGGGGAAACCCTAGGATCTG
GTGTTCCAGACCGGATGATGGCGGCACTGCGGTGTCGTTTCTCTCTTGGGAGCATCG-T-TTGTGGAGCAGTGCTGGAAG
TCAGAGGCAGGAGGTGGAGCGGCTTCGTCTTGCACGGAGCTTCGGTGGAGATGTCAAGTCATGCCTGATCGACAGGTGCT
ACGCTTGGTCATGCCTGGTTGGCAGGTGCTACGCACGACAGATCCTCCAAGGACTTCAAGCTGTGTCGGCTGGTGGTACT
TGGCAGCATGGCGCTGAGGTGTATCAGTGGCGACCGCGAC-GTGTTCAGCTGTTTGCGCGCAGGGAGGAGGTGTCGTTGG
GCGCCGTGGTGGCGTCGACGATAGCTGGACCGAGCAAGGTTGATGCATCAGTACAGTTCTGAAGATGGAGCGGTGGCAAT
TGGCGGCGGCGGCCTCTGAGAGCACGCCGGGCCAGTGTGTGTCCCAGACCCGGCAAGTGGCTAGGTTGGGGTCTCGGGTC
TTAGATGTTAGGCTTGGCTGCGATGTCTGTTTGGTATTAGGCTCAGGCTATCTGCGCCCCTTCATCAACTGGATAGGTGT
AGCGACAGTTTGTTGCTTAGACGGCGGCTTTAGTCTTACTGTTGTATGACTTTGTAAGGTCTTGTGAGAATAATTAATAA
AGTGGCCGTATGCATCGCCCGGATGCAGAGGCCGGGGGTCATCCTCCTTTCTAAAAAAAA--------------------
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>chr1B_42
-----------------------------------------GACCCACTCGTATTGCTCCCGGGGAA-CCCTAGAATCTG
GTGTTCCAGACCGGACGATGGCGGCACTGCGGTGTCGTTTCTCTCTTGGGAGCATCG-TTTTGTGGAGCAGCGCTGGAAG
TCAGAGGCAGGAGGTGGAGCAGCTTCGTCTTGCATGGAGCTTCGGTGGAGATGTCAAGTCATGCCTGACCGACAGATGCT
ACGCTTGGTCATGCCTGGTCGGCAGGTGCTACGCACGACAGATCCTCCAAGGGCTTCAAGCTGTGTCGGCTGGTGGTACT
TGGCAGCATGGCGCTGAGGTGTATCAGTGGTGACCGCGAC-GTGTTCAGCTGTTTGCGCGCAGGGAGGAGGTGTCGTTGG
GCGCCGTGGTGGCGTCGATGATAGCTGGACCGAGCAAGGTTGATGCATCAGTACAGTTCTGAAGATGGAGCGGTGGCAGT
TGGCGGCGGCGGCCTCTGAGAGCACGCCGGACCAGTGTGTGCCCCAGACCCGGCAAGTGGCTAGGTTGGGGTCTCAGGTC
TTAGATGTTAGGCTTGGCTGCGATGTCTGGTTGGTATTAGGCCCAGGCTATCTGCGCCCCTTCATCAACTGGATAGGTGT
AGCGACAGTTTGTTGCTTAGACGGCGGCTTTAGTCTTACTGTTGTGTGACTTTGTAAGGTCTTGTGAGAATAATTAATAA
AATGGCCGTATGCATCGCCCAGATGCAGAGGCCGGAGGTCATCCTCTTTTTCTAAAAAAAA-------------------
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>chr1B_42
-----------------------------------------GACCCACTCGTATTGCTCCGGGGGAA-CCCTAGAATCTG
GTGTTCCAGACCGGACGATGGCGGCACTGCGTTGTCGTTTCTCTCTTGGGAGCATCG-TTTTGTGGAGCAGCGCTGGAAG
TCAGAGGCAGGAGGTGGAGCGGCTTCGTCTTGCACGGAGCTTCGGTGGAGATGTCAAGTCATGCCTGACCGACAGATGCT
ACGCTTGGTCATGCCTGGTCGGCAGGTGCTACGCACGACAGATCCTCCAAGGGCTTCAAGCTGTGTCGGCTGGTGGTACT
TGGCAGCATGGCGCTGAGGTGTATCAGTGGCGACCGCGAC-GTGTTCAGCTGTTTGCGCGCAGGGAGGAGGTGCCGTTGG
GCGCCGTGGTGGCGTCGACGATAGCTGGACCGAGCAAGGTTGATGCATCAGTACAGTTCTGAAGATGGAGCGGTGGCAGT
TGGCGGCGGCGGCCTCTGAGAGCACGCCGGACCAGTGTGTGCCCTAGACCCGGCAAGTGGCTAGGTTGGGATCTCAGGTC
TTAGATGTTAGGCTTGGCTGCGATGTCTGGTTGGTATTAGGCCCAGGCTATCTGCGCCCCTTCATCAACTGGATAGGTGT
AGCGACAGTTTGTTGCTTAGACGGCGGATTTAGTCTTACTGTTGTGTGACTTTGTAAGGTCTTGTGAAAATAATTAATAA
AGTGGCCGTATGCATCGCCCAGATGCAGAGGCCGGAGGTCATCCTCTTTTTCTAAAAAAAA-------------------
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>chr3B_42
-----------------------------------------GACCCACTCGTATTGCTCCGGGGGAAACCCTAGGATCTG
GTGTTCCAGACCGGACGATGGCGGCACTGCGGTGTCGTTTCTTTCTTGGGAGCATCG-TTTTGTGGAGCAGCGCTGGAAG
TCAGAGGCAGGAGGTGGAGCGGCTTCGTCTTGCTC-GAGCTTCGGTGGAGATGTCAAGTCATGCCTGACCGACAGGTGCT
ACGCTTGGTCATGCCTGGTCGGCAGGTGCTACGCACGACGGATCCTCCAAGGGCTTCAAGCTGTGTCGGCTGGTGGTACT
TGGCAGCATGGCGCTGAGGTGTGTCAGTGGCGACCGCGAC-GTGTTCAGCTGTTTGCGCGCAGGGAGGAGGTGCCGTTGG
GCGCCGTGGTGGCGTCGACGATAGCTGGACCGAGCAAGGTTGATGCATCAGTACAGTTCTGAAGAGGGAGCGGTGGCAGT
TGGCGGCGGCGGCCTCTGAGAGCACGCCGGACTAGTGTATGCCCCAGACCCGGCAAGTGGCTAGGTTGGGGTCTCAGGTC
TTAGATGTTAGGTTTGGCTGCGATGTCTGTTTGGTATTAGGCCCAGGCTATCTGCGCCCCTTCATTAACTAGATAGGTAT
AGCGACAGTTTGTTGCTTAGACGGCGGCTTTAGTCTTACTGTTGTATGACTTTGTAAGGTCTTGTGAGAATAATTAATAA
AGTGGCCGTATGCATCGCCCAGATGCAGAGGCCGGGGGTCATCCTCCTTTTCTAAAAAAAAACTATG-------------
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>chr1A_779
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-----------------------------------------------------------GCTATGCAGGTGAACAACGCA
GCTCAGATTCTTGCTAAGGCGAGCGTGGAATGGACATCGGAGGAGTACTCACACCTAATGACGACCAACCAAGAGTCATA
CTTCCACCTCAGCCAGCTCGCGCACCCCTTCCTCCTTAACGCCTCCGTCTCCGGGGGAGGTAGCATTGTCAACATATCCT
CCCATGCCGGCTCACTTGGTTCCTGGCATATCAAAGAAGGAGTGCCAAATCCAGAGGTCCTGTGGGGCTACCGCCTCAAG
CACCACACTGCAACCGCCTTTGGCGCCTTTGTACATCCCCTGCCAATCAAATGGGCAATTCTT-CCATTTCCAATGCATG
CAGTCGATGCTTCCAAGCATCTCAGGAAATCCTCTTGCTGCATTCTGGGCTAGGATCCGAGCAGTGTCTTCCGCATTGGG
TGTTCTCAAGTATTGTGGCCCAAACACTGCCATCACTGCCC--------------------------------------G
ACAGAACTTGTAGAAA-CACTCTATGCTGGTGGACTCGGCCATGCGCCCATAGTCGTCGAGTGAATCACTGGGAGCTCCA
TATGCAAGCATCCTCATCGC------------------------------------------------------------
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-------------------------------------------------------TGTCGTGCACTTCTGAATGGAGGTG
AATCCAATAGTGCCAGTGCAATCCATCTTGCACTTGAAGTAGTTGTCAAACTCCCGGATGAAATTCACAATCCTGAGGAA
GAGCTTTCGGCTCATCCGATAACGGCGCCGAAATGTTTTCTCGCCATGAAGTGGAGCATCGGCGAAGTAGTCGGAGTAGA
GCATGCAGTAGCCTTCGAGACGATGCCGGTTCTTTGCTTTCACCCGCCCCGGCGCCGAGCCACCTCACCGCGGCTTTTCA
TTGCTCGCCATCAGCTGGGCGAGGGCGGCGAGCACCATGAGATGCTCTTCTTCCTGGACGTTGTCCGCGGCTTCCTCCTC
TAGCAGCGCGGCGAGCTCTTCCTCGTCATCCGAGTCCATCTTCGAGTCAGGCAAAACGCCGAACACCTTGCGCTCGGTGG
GCGTGTACCCGCCGCTAAACCGCGCCTCCGCGGCCGGAAACGGCAGCCGGAAACGCCCAGCTGCCGTGGAAGGGGCTGCC
GCGGTGAAGCGCTGCTATTTTCCGGCAGGGAATGGCTATCTAGCGGAGTAGGGCGGCGGCCGTCGCCGGGATATAGCTAG
TGGTGGCCGAGGGCGCGGGGGGTGCGGGGCGAGTCGGGGGAAGAAAACCTTGACTTTTCCCCTGTTGGTGTGGGCCAGGC
GTGCTTTTCCCTAGCGCCGGAGCCCCCAACTGCTCCCCAGCGCGCCGGGTTCGGCCTTTGACCGCCAGGCGGAAAAAAGG
TCCGAACCGTCGATTTTCGGCGTCCTAGGGGCGTGACTGGGCCGTTTTTTCGGCGCCGGCGCCGAAAAAGTGGCCTGGTG
GGGCCTGTTGGGGGCACGGCTGGAGATGCCCTTACAAGGAGCCTTGCTACAGAGTGGGCCCAGAACAAGATCCGGGTGAA
CTGTGTCGCCCCTAGCGCGACTAAGACCGACATGTTAAACAGTGCACGCACCATCAGATTCTA----CATGAAAATATGT
TATAGAAATGAATAGGTTGAACTGCTTTACGTAAGTAGTTATATGA-------TGTAC----------------------
--------------------------------------------------------------------------------
---------------------------------------------------------ATGCAATAGAATACTCTTTTACT
ATCGTTTTCGAGGAAACAATTTAACT-AAGCCAACTGATATTGCTGCCACGCATGGCAAAATGTCGATAACTGATCATTA
TACCTGAATGAAACAGCTAGGACCGGAGATCATAGAAAACGAGTTGGCCAGGACTCCGATGCGGCGAGCAGGCGAGCCGG
CCGAGGTGGCGACTGTGGTGTCATTTCTATGCATGCCGGCGGCGTCCTTCGTCACCGGCCAAGTCATCACCGTCGATGGT
GGTCGGACCATTAGTGGTTAGTCAATTAAGAGTACCTTGCGAATAAACTCATGTTTGTGTTGATCACAAAGAGTGACAAA
-TCCAATAGTCCAGAGACATTTCGTTGTACGTAGGCAGGTCGAAAATCATGTGTAACAGCGTGAGGAAACTTTTGTATTG
AAGTGAAAGAAAGGCAATCCGTATAAACAATTGCTACATGGGTGTTAATTAGTTGTTACTAGTATA--TTTTCTTAAACG
CGTGTTTGCCCTTGTCTATTAAGTTAACCGTGTATTTCCTATGGATGCATATCTCTAATCGTTAGGCTGAAATACAGGAA
CATTATTTGTTGAATAAAATATATGATTTTATTCATTAATTAAATAAAATCACAGCAACCTAAAGCACAAACAAAGAACA
AAGATCATTGGTA--------AGTTAGATAAAAAAA-TCGAAGTGAAGTCCTTACCGCTGGCCTGGCTTTATGAACGCTG
CAACAAGGTCG---------CACGCCACCCCACCTAATTCTGCTGGTCCTTCCCGCCTACTTATGCTCGGTATCGCCATC
TTCTCTCCGCCCTTTCATTGCTGCCCCGGATGATCCAGTTATCGCACTACTCCCGCCATCGC-ACCACTCCCACGCATTC
CCAACCACACCATCCCTCCTCCCCATGAACATGAACATGCTGTCACGCCTCCTCTCCACCGCACATAGCTCTGGCTGGTT
GACGCCATTGATGCACACAAGGTGTTGCCTCTCTTT--------------------------------------------
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>chr1B_779
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-----------------------------------------------------------GCTATGCAGGTGAACAACGCG
GCGCAGATTCTTGCTAAGGCCAGCGTGGAGTGGACATCGGAGGAGTACTCACATCTGATGGCGACCAACCAAGAGTCGTA
CTTCCACCTCAGCCAGCTCGCGCACCCCTTCCTCCTCAATGCCACCATAGCCGGAGGAGGTAGCATCGTCAACATATCCT
CCCATGCCGGCTCACTCGGCTTCCCTGGCCTCGCGCTCTACAGTATGGCAAAAGGTGCCCT-------------------
--------------------------------------------------ATTGCCTCTTTTTTCAATTTTTGGCGATTG
CTTCCCTAGCAAATCAAGCCGCTTGGTGTACCCTATTGCCTCTGTTCTCCAAACTTTTGAATTTTATAAAGTCCAAGGGA
AATGTAAAATCTACTTTTGAATACAAAT----------------------TCAATCTATATATTTCTAAGATATCAATAG
TCAAAATTTGAAATTATGACTCTATCCTTGCCCCGGGACGACAATGTTCTTAGGACTGCAAAAAATGCTTCGGGAGGTTT
CTAAGAGGCTATCTCGGGTAGCAAATGAAGTATACAGAAGAGCGTATGTGTGGAATCCTTCTGCTCAAAGGCTGAGTTTT
GTGTGTACCTGAGATGGGGCTACTATGTAGTATGTTTTGATTTTAGACTTGCTTATTGCTTTGGCTGATGTGCAATCTGT
AAAAAGATGTTTAAAAAGTCTGCTCTCTCTCTCCGGTAGTGGGTGATTTGGCATCTTATAGATGTGGTTATATGTCTAGG
ATGTAGGTTGCTTATCAGTTGATGAGGTGATGCATCAGGTCTGATGAAAAAAGTGATGTGGTGGTGTGTTTTGTTGTATC
CAGACTCCTATTTTCATAATGAAAATGGGAGCCATGTGGCCCCTCTTATCGAAAAAATAATAATCTAACTATTTGTAAAG
ATAATCATACTAAAATATCATAAGTTAGAATGTGCTAATTGGGATATACAGATATTTTTGAGAAGTTTTGAATTGAAGGT
ATTC--AGAACTGCAACTCAATCC----TTCAATTCAGGCATCAAAATTACATCTCCTTTATATCATTAAT----ATACC
GTCTT---------------------------------------------------------------------------
GCATGCAGGAGGAATCAACCAG----------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------CTTACAAGGAGCCTTGCTACAGAGTGGGCCCAGAACAAGATCCGCGTGAA
CTGTGTCGCCCCTAGCGCGACTAAGACCGACATGTTAAACAGTGTACGCTCCGTCAAATTCTATCTACATAAAAATATGT
TATAGAAATGAATAAGCTGGACTGCTTTACAGTAGTAGTTATATGAACTTTTTTGTAC----------------------
--------------------------------------------------------------------------------
---------------------------------------------------------ATGTAGTAGGATAATTTTCTACT
ATCGTTTTCGAAGTAACAGTTTAACTCAAGCCAACTGATACTGCTGCCACGCATGGCAAAATGCCGATAACTGATCACTA
TACCTGAATGAAACAGCTAGGACCGGAGATCATAGAAAACGAGTTGGCCAGGACTCCGATGCGGCGAGCAGGCGAGCCAG
CCGAGGTGGCGACTGTGGTGTCATTTCTCTGCATGCCGGCGGCGTCCTTCGTCACCGGCCAAGTCATCACCGTCGATGGT
GGTCGGACCATTAGTGGTTAGTCAATTAAGAGTACCTTGCGAATAAACTCTC-TGTGTGTTGATCACAAAGAGCGACAAA
ATCCAACAGTCGAAAGACATTTCGTTGTACGTAGGCAGGTCGAAAAGCATGTGTGGCAGCATGAGGAAACTTTTGTATTG
AAGTGAAAGAAAAGCAATCCGTATTAA-AACTGCTACATGGGTGTTAGTTAGTTGTCACTTA------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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----------------------------------------------------GGTGTCAATGCAAAATCATCTAAGGAGG
AATGTTTAGGATTCATTGCCCGGAGGATGGTGATGAAATTCTTGAGGCTAATGATGATTTGGGCATGGTGGCTCTTTTGC
TTGCGGAGATGGATGAGGGCAACAACTGAAAGCACACATGTTCTCAACCGGGGTGTGTTATGAT
>SNPs
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS--------------S----S-------------------
---S---------------------------------------------S-----------------------S------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------S------------------S----------S--------S-----------------------S------
--------S-----------------------------------------------------------------------
------------------S------------S-------------S----------S-----------------------
------------------------S---------------------S----------S----------S--S--------
--------------S---------S-------------------------------------------------------
-------------------------------------S-S------------------S---------------------
---------S----S----S-------------------------------------------------S----------
---------------------------S----------------------------S-----------------------
--------------------------------------------------------S-----------------------
--------------------------------------------------------------------------------
---S---------S--------------------------------S-----------------S------------SS-
-------------------S----S---S-SSS-S-SSSSSSSSSSSSSS--------S---------------------
------------------------------S---SS--------------------------------------------
------S------SS-----------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------------------------------S-S
--S----S--------S---S--------S------S-------------S------------------S--------S-
--------------------------S-----------S----------S-------------------SSSSSS-----
----S---------------------------------------------------------------------------
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-----------------------------------------------------S--------------------------
---------------------------------------------------------S----------------------
----------------------------------------------------------SSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS-----------------------
-------------------------------------------------------------------S------------
--------------------------------------------------------------------------------
------------S------------------S-----------S------------------------------------
---S----------------------------------------------S-----------------------------
--------S----------------S------------S---------------------------S-------S-----
---------------------------S---S------------------------------S--SSS------------
--SS---------S---------------S-------------S-------------------S--S---------S---
---S----S---S-S----S----------------------------------S---SS--S---S--S-------S--
-------------SSSSSSSS-----S--------SS-------------------S-----------S-------S--S
-S--S-----SSSSSSSSSS----------SS--------S--SS-----S--S-S-----------S-S------SS--
-------S----S-------S--S--S----------------S---S----------S-SSS----------S--S---
---S----S-------------S-------S-------------S------------S-----------------S----
-----------S--------------S-----S--SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS----------S---------SS------
--------S---S----S----S--------S-------S-------S-S------------------------------
-------------S------------S-------SS----------------------------
>forward_331
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-----------------------------------------------------------------------GGTGGTACT
TGGCAGCATGA---------------------------------------------------------------------
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>reverse_2694
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-----------------------------------------------------ATGGGCCCAGAACAAGATCC-------
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----------------------------------------------------------------
>forward_585
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-----TGTTAGGCTTGGCTGCGATA-------------------------------------------------------
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----------------------------------------------------------------
>reverse_3663
--------------------------------------------------------------------------------
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--------------------------------------------------------------GAGCGCACACAAAGAGCA
AA------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------------------
