>input_sequence_61787
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-----------------------------ATGCATCCCAAGGCTCGCATCCACGCGGACCCGGCGGCTCCG---GAGCTA
GACCGGATCGACTGCCTGCCGGACTCGCTCGTCCTGCTCATCCTCAACAAGCTGGAGGACGTGCACTCGCTCGGCCGCTG
CGCCGCCGTGTCCAAGCGCTTCAACGACCTGGTCCCGCTCGTCCACGACGTGTACGTCAAGATCGACCGCGTCGTCGCCG
TGGACGGCGACCCCGACGACGCGCTCAACCTGTCGTCCGCCAAGCCC---CGGCACATCTTCTCCCACCTCTTCAAGCTC
ATGCTCTTCACCATCGCCAAGCCGTTTCACGGCATGCG---CGGCCCGGGCGGCGCGGG---CGGCAGGCCTCTGTTCCC
GCGGCTCGCGCAGCACTCGCCCGTGCAGGTGCTGAGGGGCTTCTCCCACGTCCGGAACCTCCGGGTGGAGCTCCCCTCGG
GGGACGTCGGGACGGAGGAGGGCGTCCTGCTCAAGTGGCGGGCCAGGTATGGCAGCACGCTCCAGAGCTGCGTGATCCTT
GGCGGCACCCTGGTCGACCGCAAGCCCGCCGG---------GCACGAGCCGTC---GGCG--------------------
-------------------GAGGACGGCGGGAGCATGCCGGAGTCCTTCTACACCAACGGCGGGCTGAAGCTCCGCGTGG
TGTGGACCATCAGCTCCCTGATCGCCGCGTCGACGCGGCACTACCTCCTCCGGTCGATCATCAAGGAGCATCCGACGCTG
CGAAGCCTGGTGTTGGCGGACGCCGACGGGCAGGGGACGCTGTGCATGGGGGCGGAGCAGCTCGCGGAGTTCAGGGAGAA
CCGGCTGTCGGCCTCGGCGTGCTCCAACAGGACGCAGGTCCCGGCGTGCAGCATGAAGCTCAAGTACGCGCCGTACCTCG
AGCTGCCCGGCGGCCTGGGGCTGCAGGGCGCGACCCTGGTCGTCATCAAGCCCTCCGGCGATGGGGCTGGTGGCTGTCAC
GTTGGCCGGAAGGAGACTGATGCTTTTGTCTCGGGCGCGTTCGATGGGCCTTTCAGGTTCGCGGCCAAGGCGCTGATGAA
GCGGCGCACCTATCTGCTGGAGATGAACGGGTTCTAG-------------------------------------------
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-------------------------------------------------------------------------
>chr3B_1_TraesCS3B01G368000
TCCGCGATCGCCTCTCGGTCGCCTCTTAGGGAAACAGAAACGTGGTGGACCCGTCCCAGCATAACTACCGTCCGCCTTAT
CTTTCTGCCACGTCCTCTGTTTCTGATCGCTTATTAGTGCTCAATC-TTTCTCGTAGTAAAAGCGAAGGGGAAATTAGCT
TGCCGACCAGGCAAAAGCGCAAAGGCGCAGGCGCGTGCGTGA---CGTGAGTGACCCGGTCACCGTGCGTCGACCCGAGT
CTATCCAC---------------GTAAAACGGCGTTATTAAATTAAC------GTAGGCCCGTGCGCGCGCCGCAGCGAC
ACCGTCGCCTCCCT-CCAAGGCAGTA--------CTATTCCCCAAGCCACGCCCACACCCAGTGGC------GAGCAGCA
CGCTTCCCCTCCTATAGAAAACGTCCCCGGGACGAGACCCCGAGACCAG-AAATTCCCCACAGCAAAGCAAACCACATCC
TCTTCCCCTCCCCTCCCCTTCCCTGCTCGCGCTAGTTCACTGCCCGAATCCAAAGCTCCCGGCTGCCCGCGT--------
-------GGGGTGCTGTCGTTA----------GTTCGCGCTCG----------CCGGAGCTGGGATCCGGCCGGG-TTCT
GGGCGGAAGGCCGGATTTGGGGCCGGCCGGTTTCACCTCGTTCCATTGTTTTCGCCGCCGCCAAGCTGCCCGTAGCCGTC
CTCGTGGTAAGTACTACAGCCTTC----------TTGGTTCATCTGCCCCGGTTCGGTTTCTAGTCTTAGCACGATGGCA
GTACTGCTCCATGGATGGA-----------------------TTTTTGCTCGTCCCGCACGCCTGTTTGTGTTTTGTGTG
GAGAGATTCAGTCGCATTGTAG---------------AGACAATTTTTCTGGCGTCGGATTGGATGTGTCTTGCTGG---
--CTCAGCTCAGGCCGTTTGCGCACCAAGTTTGTGTGACAAATGAAATGCTGCCTTGCGCAGCTCAGCTCCTCCCCCGTC
AAATTCGTTTTCTTAGCTCTTACCATAGCTATTGTTTTTGTTTCAGAAAAGAA---------------------------
------------------------------------------------------------------------ATTGCTGG
TTCGTTCGTAGCAGTTCAGAGTCTGAAAAATGCATCCCAAGGCTCGCATCCACGCGGACCCGGCGGCTCCG---GAGCTA
GACCGGATCGACTGCCTGCCGGACTCGCTCGTCCTGCTCATCCTCAACAAGCTGGAGGACGTGCACTCGCTCGGCCGCTG
CGCCGCCGTGTCCAAGCGCTTCAACGACCTGGTCCCGCTCGTCCACGACGTGTACGTCAAGATCGACCGCGTCGTCGCCG
TGGACGGCGACCCCGACGACGCGCTCAACCTGTCGTCCGCCAAGCCC---CGGCACATCTTCTCCCACCTCTTCAAGCTC
ATGCTCTTCACCATCGCCAAGCCGTTTCACGGCATGCG---CGGCCCGGGCGGCGCGGG---CGGCAGGCCTCTGTTCCC
GCGGCTCGCGCAGCACTCGCCCGTGCAGGTGCTGAGGGGCTTCTCCCACGTCCGGAACCTCCGGGTGGAGCTCCCCTCGG
GGGACGTCGGGACGGAGGAGGGCGTCCTGCTCAAGTGGCGGGCCAGGTATGGCAGCACGCTCCAGAGCTGCGTGATCCTT
GGCGGCACCCTGGTCGACCGCAAGCCCGCCGG---------GCACGAGCCGTC---GGCG--------------------
-------------------GAGGACGGCGGGAGCATGCCGGAGTCCTTCTACACCAACGGCGGGCTGAAGCTCCGCGTGG
TGTGGACCATCAGCTCCCTGATCGCCGCGTCGACGCGGCACTACCTCCTCCGGTCGATCATCAAGGAGCATCCGACGCTG
CGAAGCCTGGTGTTGGCGGACGCCGACGGGCAGGGGACGCTGTGCATGGGGGCGGAGCAGCTCGCGGAGTTCAGGGAGAA
CCGGCTGTCGGCCTCGGCGTGCTCCAACAGGACGCAGGTCCCGGCGTGCAGCATGAAGCTCAAGTACGCGCCGTACCTCG
AGCTGCCCGGCGGCCTGGGGCTGCAGGGCGCGACCCTGGTCGTCATCAAGCCCTCCGGCGATGGGGCTGGTGGCTGTCAC
GTTGGCCGGAAGGAGACTGATGCTTTTGTCTCGGGCGCGTTCGATGGGCCTTTCAGGTTCGCGGCCAAGGCGCTGATGAA
GCGGCGCACCTATCTGCTGGAGATGAACGGGTTCTAGATGCCGTTGAGGTGTTTGTGGATGGACATC-----TTGCTTTT
GCAGTGCTTCTCATGGAC--AACTGTTTTCTGCTCGGGCAAATGCAGCTTCTGAATTGTAGTG---------TTGCATAT
AATCTGCTGCATTACTAGTTGACAGATGGGTTTACATATATGCTCATCAGCTCATGGGCAGAGTGCTGGCGTCTTATCTG
TGGCGTTTGGGTGCAATCTGTCTTGACTCTTGCTCGCACAATCCACTCTTCCAATAGTAATGGAAA-----------TTT
CCGGAGAATTATTTACATATATGCTTCCAATGTAAA--------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------TAACTAGTCAGATATATTTTAAAGA
GACCAGCTCTAGGAAGAAATCAGGCCAATAGATTCCGACTGCACATGCATTGACGCTCTCTACGGCATTTTACAGTAGCT
TCTATACTGCAGCTATTGACGAGAGCGGCGAAAGAACACACGAGCTCGCTTGCTCTCGGTACCTAGACCAACGGCTGAAC
GACGCGTCGCTACAAGAATTAAATGCGATCGTATAGGCTGAGAAGGATACAACCGGTCGGACAATATTGTAGAGTGACGG
CTCCATCCAACCTGACGACGCGATGACGGTACACTTCGGACATGTTCTGTCAGTACATGTATC-----------ACATAA
TGATTTGCGACTGGGGGTCCGTCTC-------------------------------------------------------
--------------------------------------------CGGACACCGCATGAGTCAGAGAAGCTCAAAGCTATG
GCGACGAGCCGACGACGGAGGCAACAGGCTATGGATTTAAGTTCTCATGAGATGCGGTTGATAGCTCTGTTCCTCGCGCC
GCCTTTTGCTGCTAATGACAACCGCTGTTACTAGATGCGCAGCTTCATAATCTTTTTCTACGTTTGAGCAGATTCCCTGT
AAGACAATAAGTTTTGGGGAACCAGCACAACCCTCTAGGGGTGGCTTATCTCATTATATATAATGGTTGTGTTACAATAT
GTACCATATACGTACATAGGTACAGAAGCTATACATAGTCTAACACCCTCAATCTTAGCCACTTTCTAAAGAA
>chr3D_87
--------------------------------------------------------------------------------
------GCCACGTCCTCTGTTTCCGATCGCTTATCAGTGCTCA-TC-TTTCTCGTGGTAAAAGCGAAGGGGAAATTAGCT
TGCCGACCAGGGCAAAGCGCAAAGGCGCAGGCGCGTGCGC--------GAGTGACCCGGTCACCGTGCGTCCACCCGAGT
CTATCCAC---------------GTAAAACGGCGTTATTAAACTAAAATTAAAGTAGGCCCGTGCGCGCGCCGCAGCGAC
ACCGTCGCCTCCCTCCCAAGGCAGTA--------CTATTCCCCAAGCCACGCCCACACCCAGTCCCAGTGGTGAGCAGCA
CGCTTCCCCTCCTATAGAAAACGTCCCCGGGACGAGACCCCGAGACCGG-AAATTCTCCAAAGCAAA-----CCACATCC
TCTTCCCCTCCCCTCCCCTTCCCTGCTCGCGCGACCTCACTGCCCGAATCC-AAGCTCCCGTCTGGGCGGCTGCTCCTGC
TCGTGTGGGTGTGCCGTCGTTA----------GTCTGCGCTCGGGTTCGT---CCGGAGCTGGGATCCGGTTGGGTTTCC
GGGCGGAAGGCCGGATTTGGGGCCGGCCGGCTTCATCTCGGCCCATTGTTTT---CGCCGCCGAGCTCTCCGTAGCCATT
CTCCTGGTAAGCACA---GCCTTCCCGGGTTAGCTTGCTTCGTGTTCTGCAGTGCGTCTCCTAGTCTTTGCATAATGGTA
CTAC----CCATGGATGAATTTTTGTTCGTCTCGCC----------TG------------------------TTTGTGCG
GAGAGATTCAGTTGCATTGTGAATAAGTATGT-----------TTTGTCTAGCG-----TTGGATGTGTCTTGCTGGCTC
TT-----CTCGGGTCGTTTGCGCACCAAGTTTGTGTGACCAATTCTG-------------------------CCCCCGTC
AAATTCTTCTTCTTACCATAGCTCTTG--------TTTTGTTCCAGAAAGTAAAAATTAGCTTCAGTTTGAGGGGTTCTC
CCGCCGGCTCAAGTCATCCGAAGAACCGGACGCTCTGTTAGCGCTAGCGTTTCCTGCTGCAACAGACAACGGATTGCTGG
TTCGTTCGTAGCAGTCCAGAGTCTGAAAAATGCATCCCAAGGCTCGCATCCACGCGGACCCGGCGGCACCG---GAGCCG
GACCGGATCGACGGCCTGCCGGACTCGCTCGTGCTGCTCATCCTCAACAAGCTGGAGGACGTGCACTCGCTGGGCCGCTG
CGCCGCCGTGTCCAGGCGCTTCAACGACCTGGTCCCGCTCGTCCACGACGTGTACGTCAAGATCGACCGCGTGGTGGCCG
TGGACGGCGACCCCGACGACGCGCTCAACCTGTCGTCCCCCAAGCCC---CGCCACATCTTCTCCCACCTCTTCAAGCTC
ATGCTCTTCACCATCGCCAAGCCGTTCCAAGGCATGCG---CGGCCCGGGCGGCGCGGG---CGGCCGGCCGCTGTTCCC
GCGGCTCGCCCAGCACTCGCCCGTGCAGGTGCTCAGGGGCTTCTCCCACGTCCGCAACCTCCGGGTGGAGCTCCCCTCGG
GGGACGTCGGGACGGAGGAGGGGGTTCTGCTCAAGTGGCGGGCCAGGTACGGCAGCACGCTCCAGAGCTGCGTCATCCTG
GGCGGCACCCTGGTCGACCGCAAGCCCGCCGGCG------GGCACGAGCCGTCGGCGGCG--------------------
-------------------GAGGACGGCGGGAGCATGCCGGAGTCCTTCTACACCAACGGCGGGCTGAAGCTGCGCGTGG
TGTGGACCATCAGCTCCCTGATCGCCGCGTCGACGCGGCACTACCTGCTCCGGTCTATCATCAAGGAGCATCCGACGCTG
CGAAGCCTGGTGCTGGCGGACGCCGACGGGCAGGGGACGCTGTGCATGGGGGCGGAGCAGCTCGCGGAGTTCAGGGAGAG
CCGGCTGTCGGCCTCGGCGTGCTCCAACAGGACGCAGGTCCCGGCGTGCAGCATGAAGCTCAAGTACGCCCCCTACCTCG
AGCTGCCCGGCGGCCTGGGGCTGCAGGGCGCGACCCTGGTCGTCATCAAGCCCTCCGGCGACGGGGCTGGCGGGTGTCAC
GTTGGCCGGAAGGAGACCGAAGCCTTTGTCTCGGGTGCGTTCGATGGGCCGTTCAGGTTCGCGGCCAAGGCGCTGATGAA
GCGGCGCACCTATCTGCTGGAGATGAACGGGTTCTAGATGCTGTTGAGGTGTTTGTGGATGGATATC-----TTGCATTT
GCAGTGCTTCTCATGAGTATAACTGTTTTCTGCTTGGGCAAATGCAGTTTCTGAATTGTAGTG---------TTGCATAT
AAGCTGGTGCGATATTAGTTGACAG----------------------------------------------TCTTATCTG
TAGCGTTTGGGTGCAATCTG-------TCTTGCTCGCACAATCCACTCTTCCAATAGTAATGGAAAGAAATTTGAAATTT
CCAGAAAAATATTTACATATATGCTTCTACATTATGGGAACGTTTAGAAATATAAGAACGTTTAGATCACTTAAGTATCA
GAAATATAAGAAATATAAGAACGTTTAGATCACTAAAGTATTAGAGAGAGTAAATACTACTCCCTCCGTCCCATAATGTT
GGACGTTTTTTGATACTATAGTCAAAAAACGTTCTACCTTATGGGACGGAGGGAGTAACTAGTAAGACATATTTTGAAGA
GACAAGCTCTAGGAAGAAATCAGGTCAGTAGATTCAGACTGAATATGCATTGACGCTCTCTACGGCATTTTACAG-----
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-------------------------------------------------------------------------
>chr3A_109
--------------------------------------------------------------------------------
----------------------------GCTTATTAGTGCTCA-TCTTTTCTCGTAGTAAAAGCGAAGGGGAAATTAGCT
TGCCGACCAGG-------GCAAAGGCGAAGGCGCGTGCGTGCGTGCGTGAGTGACCCGGTCACCGTGCGTCCACCCGAGT
CTATCTATCTATCCACGTGTAGAGTAAAACGGCGTTATTATTAAATTAGAGG---AGGCCCGTGCGCGCGCCGCAGCGAC
ACCGTCGCCTCCCTCCGAGGCAGTCTCCGCGGCGCTATTCCCCAAGCCAC------ACCCAGACCCAGTGGTGAGCAGCA
CGCTTCCCCTCCTATACAATACGTCCCCCGGACGAGACCCCGAGGCCAGAAAATTCCCCAAACCAAA-----CCACATCC
CCTCCCCTTCCC-----------TGCTCCCGCGAGCTCACCGCCCGAATCC-AAGCTCCCGGCTGCTCGCGT--------
-------GCGGTGCTGTCTGGAGCAGCTGCTTGTTCGCGCTCGGGTTGGGTCACCGGAGCTGGGATCCGGGCGGAACT--
----------CCGGATTTGGGGCCGGCCGGTTTCATCCCGGTCCATTGTTTTCGCCGCCGCCAAGCTGCCCGCAGCCGTC
CTCGTGGTAAGT-------------------------GTTCATCTGCCCCGGTTCAGTTTCTAGTCTTACCACGATAGCA
GTACTGTTCCATGGATGAA-----------------------TTTGTG------------------------TGTGTGTG
GAGTGATTCAGTTGCATTGTAGGAGTACTAGTTGTAGAGACAATTTTCCTGGCGTTGGATTGGATGTGTCTTGCTGGCTC
AGCTCAGCTCAGGCCGTTCGCGCACCAAGTTTGTGTGACAAATGCTG-------------------------CCGC----
--------CTTCTTAGCTCTTACAATAGCTACTGTTCTTGTTTCAGAAAAGAA---------------------------
------------------------------------------------------------------------GTTGCTGG
TTCGTTCGCAGCGGTCTACAGTCTGAAAAATGCATCCCAAGGCTCGCATCCACGCGGACCCGGCGGCGCCG---GAGCCG
GACCGGATCGACGGCCTGCCGGACTCGCTCGTGCTGCTCATCCTCAACAAGCTGGAGGACGTGCACTCGCTGGGCCGCTG
CGCCGCCGTGTGCAGGCGCTTCAGCGACCTGGTCCCGCTCGTCCACGACGTCTACGTCAAGATCGACCGCGTGGTGGCCG
TGGACGGCGACCCCGACGACGCGCTCAACCTCTCGCCCCCCAAGCCC---CGCCACATCTTCTCCCACCTCCTCAAGCTC
ATGCTCTTCACCATCGCCAAGCCGTTCCACGGCATGCG---CGGCCCGGGCGGCGCGGGCGGCGGCCGGCCGCTGTTCCC
GCGGCTCGCCCAGCACTCGCCCGTACAGGTGCTCAGGGGCTTCTCCCACGTCCGCAACCTCCGGGTGGAGCTCCCCTCGG
GCGACGTCGGCACGGAGGAGGGGGTGCTGCTCAGGTGGCGCGCCAGGTACGGCAGCACGCTCCAGAGCTGCGTCATCCTC
GGCGGCACCCTCGTCGACCGCAAGCCCGCCGGCGCTGCCGGGCACGAGGCGTCGGCGGCG--------------------
-------------------GAGGACGGCGGGAGCATGCCGGAGTCCTTCTACACCAACGGCGGGCTGAAGCTGCGCGTGG
TGTGGACCATCAGCTCCCTCATCGCCGCGTCGACGCGGCACTACCTGCTCCGGTCGATCGTCAAGGAGCATCCGACGCTG
CGGAGCCTGGTGCTGGCGGACGCCGACGGCCAGGGGACGCTGTGCATGGGCGCGGAGCAGCTCGCGGAGTTCAGGGAGAA
CCGGCTGGCGGCCTTGGCGTGCTCCAACAGGACGCAGGTGCCGGCGTGCAGCATGAAGCTCAAGTACGCGCCGTACCTCG
AGCTGCCCGGCGGCCTGGGGCTGCAGGGCGCGACCCTGGTCGTCATCAAGCCGTCCAGCGATGGAGCCGGCGGGTGTCAC
GTTGGCCGGAAGGAGACCGAAGCCTTTGTGTCCGGCGCGTTCGATGGGCCGTTCAGGTTCGCGGCCAAGGCGCTGATGAA
GCGGCGCACCTATCTGCTGGAGATGAACGGATTCTAGATGCCGTTGAGGTGTTTGTGGATGGATATCATATCTTGCTTTT
GCAGTGCTTCTCATGAGCATAACTGTTTTCTGCTCGGGCAAATGCAGCTTCTGAATTGCGGTGTTGCTTGCATTGCATAT
AAGCTGCTGCATTACTCGTTGACAGATG----------------------------------------------------
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>chr7B_548
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---------------------------------------------------------------GATCCGGCCAGG-TTCT
GGGCGCAAGGCTGGATTTGGGGCCGGCCGGTGTCATCTCGGTCCATTGTTTTCGCCGCCGCCAAGCTGCCCGTAGCCGTC
CTCGTGGTAAGTACT---GCCTTC----------TTGGTTCATCTGCCCCGGTTCAGTTTATAGTCTTAGCACGATAGCA
GTACTATTCCATGGATGGATTTTTGTTCGTGCCGCACGGCTGTTTGTG------------------------TTCGTGTC
GAGAGATTCAGTTGCATTGTAGTTG---TATTTGTAGCGACAATTTTTCTAGCGCTGGATTGGATGTGTCTTGCTGGCTC
AA-----CTCAGGTCGTTTGCGCACCAAGTTTGTGTGACAAATGAAATGCTGCCTTGCGCAACTCAGCTCCTCCCCCGTC
AAATTCGTCTTCTTACTTCTTACCATGGCTACTGTTTTTGTTTCAGAAAAGAA---------------------------
------------------------------------------------------------------------ATTGTTGG
TTCGTTCGTAGCAGTCTAGAGTCTGG-AAATGCATCCCAAGGCTCGCATCCACGCGGACCCAGCAGCTCCG---GAGCTG
GACCGGATTGACTGCCTGCCGGACTCACTCCTCCTGCTTATCCTCAACAAGTTGGAGGACGTGCACTCGCTCGGCCGCTG
CGCCGCCGTGTCCAAGCGCTTCAACGACCTGGTCCCACTCGTCCACGACATGTACGTCAAGATCGACC------------
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>chr3D_1000
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----------------------------AATGCTTCCCAAGGCCCGAATCCACGCCGACCCGGCGCCTGACTTCGAGGTC
GACCGCTTCGACTGCCTGCCGGCCTCGCTCGTCCTGCTCATCCTCAACAAGGTCGAGGACGTGCGGTCGCTCGGCCGCTG
CTCCGCGGCGTCCAAGCGGCTCTACGGCCTCGTTCCCCTCGTCCACGACGTGTGCGTCAAGATTGACTGCGTCGTGGCGG
TGGACGGCGACGCGGAGGACGCGCTCAACCTGTCCTCGCCCAAGCCC---CGGAACATCCTCTCCAACTTCTTCAAGCTG
ATGCTGTCCACAATCGTCAAGCCGTTCCACAGCATGCG---CAGCCCCAATGGCGC------TGGACGGCCGCTCTTCCC
GCAACTCGCGCAGCACTCGCCAGCGCAGGTGCTCCGGAACTTCACCCACATACGGAACCTTCAGATCGAGCTCCCTTCGG
GTGATGTTGGGACCGAGGACGGGGTTCTACTGAAATGGCGGGCGGAGTACGGGAGTACGCT----------GTGATTCTC
GGGGGTACCAGGGTCGACCGCAAGCCTGTGGGTGCAGA---GAACGAGCCGTC---CTCG--------------------
-------------------GAGGACAATGGAAGCATGCCAGAGTCTTTCTACACCAACGGCGGACTCAAACTCCGTGTCG
TGTGGACAATCAGCTCTCTAATCGCGGCATCGACGAGGCATTATCTTCTCCGGTCAATCATCAAGGACCACCCCACATTT
GTGAGCTTGGTGCTGACCGATGCCGATGGCCAGGGCACACTGTGCATGGGAGCAGAGCAACTGAAGGAGTTTAGAGAGAA
CCAATTGTCCACCTCAGCATGCTCCAACAGGACTCAGGTCCCAGCCTGCAACATGAAGCTCAAATACACTCCGTATCTCG
AACTGCCGGGAGGAATTGCATTGCAGGGTGCTACACTGGTTGTTATCAAGCCCTCGACCGATGGAACCGATGGCTGCCAT
ATCAGCTGCAAGGAAACGGATGCGTTCATCTCTGGAGCATTTGATGGACCATTCAAATTTGCTGCGAAGGCGCTGATGAA
GAGGCGCACATACCTTCTGGAGATGAATGGCTTCTAGA------------------------------------------
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>chr1B_1001
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-----------------------------ATGCTTCCCAAGGCCCGAATCCACGCGGACCCGGCGCTCGAGCTCGAGCTC
GACCTGTTCGACTGCCTGCCGGACTCGCTCGTCCTGCTCATCCTCAACAAGGTGGAGGACGTGCGTTCCCTCGGCCGCTG
CTCCGCCGCGTCCAAGCGGTTCAACGGGCTCGTGCCCCACGTCCACGACGTCTGCGTCAAGATCGACCGCGTCGTGGCGG
TCGACGGCGACGGCGAGGACGCCCTCAACCTGACCTCGCCCAAGCCC---CGGAACATCCTCTCCCACTTCCTCAAGCTG
ATGCTCTTCACGATCATCAAGCCCTTCCACAACGCGCG---CGGCCCCAACGGCGC------CGGGCGGCCGCTCTTCCC
GCAGCTCGCGCACCACTCGCCGGCGCAGGTGCTACGGAGCTTCACGCACGTTCGGAACCTTCACATCGAGCTCCCTTCCG
GGGATGTCGGGACCGAGGACGGGGTGCTCCTGAAATGGCGGGCAGAGTACGGGAGCACGCTTCAGAACTGCGTGATCCTC
GGGGGCACCAGGGTTGACCGCAAGCCTGTTGGCGCAGA---GCACGAGCCGTC---TTCG--------------------
-------------------GAGGACAATGGGAGCATGCCGGAGTCTTTCTATACCAATGGCGGGCTCAAGCTCCGTGTCG
TGTGGACAATCAGCTCCCTCATCGCAGCATCGACGAGGCATTATCTTCTCCGGTCGATCATCAAGGAGCACGCCACACTT
GTGAGCTTGGTGCTGACCGATGCCGATGGTCAGGGCACGCTGACCATGGGAGCAGAGCAGCTGAAGGAGTTCAGAGAGAA
CCAACTGTCGGCCTCAGCATGCTCCAACAGGACCCAGGTCCCGGCCTGCAACATGAAGCTGAAATACGCGCCATATCTCG
AGCTGCCCGGAGGAATCGCGTTGCAGGGTGCTACACTGGTTGCTATCAAGCCCTCCACCGAGGGAAGCAATGGCGGCCAT
GTCAGCCGCAAGGAAACGGACGCGTTCATCTCTGGAGCATTTGATGGGCCATTCAAATTCGCTGCCAAGGCGCTGATGAA
GAGGCGCACATACCTTCTGGAGATGAATGGCTTCTAG-------------------------------------------
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-------------------------------------------------------------------------
>chr1D_1001
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-----------------------------ATGCTTCCCAAGGCCCGAATCCACGCGGACCCGGCGCTCGACTTCGAGCTC
GACCTCTTCGACTGCCTGCCGGACTCGCTCGTCCTTCTCATCCTCAACAAGGTGGAGGACGTGCGTTCCCTCGGCCGCTG
CTCCGCCGCGTCCAAGCGGCTCAACGGGCTCGTGCCCCACGTCCACGACGTCTGCGTCAAGATCGACCGCGTCGTGGCGG
TCGACGGCGACGGCGAGGACGCCCTCAACCTGACCTCGCCCAAGCCC---CGGAACATCCTCTCCCACTTCCTCAAGCTG
ATGCTCTTCACGATCATCAAGCCCTTCCACAACGCGCG---CGGCCCCAACGGCGC------CGGCCGGCCGCTCTTCCC
GCAGCTCGCGCACCACTCGCCGGCGCAGGTGCTCCGGAGCTTCACGCACGTGCGGAACCTCCACATCGAGCTCCCTTCCG
GGGATGTCGGCACCGAGGACGGGGTGCTCCTGAAATGGCGGGCAGAGTACGGGAGCACGCTTCAGAACTGTGTGATCCTC
GGGGGCACCAGGGTTGACCGCAAGCCTGTTGGCGCAGA---GCATGAGCCGTC---TTCG--------------------
-------------------GAGGACAATGGGAGCATGCCGGAGTCTTTCTATACCAATGGCGGGCTCAAGCTCCGCGTCG
TGTGGACGATCAGCTCCCTCATCGCGGCATCGACGAGGCATTATCTTCTCCGGTCGATCATCAAGGAGCACCCCACACTT
GTGAGCTTGGTGCTGACTGATGCCGATGGCCAGGGCACGCTGACCATGGGAGCAGAGCAGCTGAAGGAGTTCAGAGAGAA
CCAACTGTCGGCCTCGGCATGCTCCAACAGAACCCAGGTCCCGGCCTGCAACATGAAGCTGAAATACGCGCCATATCTCG
AGCTGCCCGGAGGAATTGCGCTGCAGGGTGCTACACTGGTTGCTATCAAGCCCTCCACCGAGGGAAGCAATGGCGGCCAT
GTCAGCCGCAAGGAAACGGACGCATTCATCTCTGGAGCATTTGATGGGCCATTCAAATTCGCCGCGAAGGCGCTGATGAA
GAGGCGCACATACCTTCTGGAGATGAATGGCTTCTAG-------------------------------------------
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>chr1A_1001
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-----------------------------ATGCTTCCCAAGGCCCGAATCCACGCGGACCCGGCGCTCGACTTCGAGCTC
GATCTCTTCGACTGCCTGCCGGACTCGCTCGTCCTGCTCATCCTCAACAAAGTGGAGGACGTGCGTTCCCTCGGCCGCTG
CTCCGCGGCGTCCAAGCGGTTCAACGGGCTCGTGCCCCACGTCCACGACGTCTGCGTCAAGATCGACCGCGTCGTGGCGG
TCGACGGCGACGGCGAGGACGCCCTCAACCTGATCTCGCCCAAGCCC---CGGAACATCCTCTCCCACTTCCTCAAGCTG
ATGCTCTTCACGATCATCAAGCCCTTCCACAGCGCGCG---CGGCCCCAACGGCGC------CGGGCGGCCGCTCTTCCC
GCAGCTCGCGCACCACTCGCCGGCGCAGGTGCTCCGGAGCTTCACGCACGTGCGGAACCTCCACATCGAGCTCCCTTCCG
GGGATGTCGGCACCGAGGACGGGGTGCTCCTGAAATGGCGGGCAGAGTACGGGAGCACGCTTCAGAACTGTGTCATCCTT
GGGGGCACCAGGGTTGACCGCAAGCCTGTTGGCGCAGA---GCATGAGCCGTC---TTCG--------------------
-------------------GAGGACAACGGGAGCATGCCGGAGTCTTTCTATACCAATGGCGGGCTCAAGCTCCGCGTCG
TGTGGACGATCAGCTCCCTCATCGCTGCGTCGACGAGGCATTATCTTCTCCGGTCGATCATCAAGGAGCACCCCACACTT
GTGAGCTTGGTGCTGACTGATGCCGATGGCCAGGGCACGCTGACCATGGGAGCAGAGCAGCTGAAGGAGTTCAGAGAGAA
CCAACTGTCGGCCTCGGCATGCTCCAACAGGACCCAGGTCCCGGCCTGCAACATGAAGCTGAAATACGCGCCATATCTCG
AGCTGCCTGGAGGAATTGCGCTGCAGGGTGCTACACTGGTTGCTATCAAGCCCTCCACCGAGGGAAGCAATGGCGGCCAT
ATCAGCCGCAAGGAAACCGACGCATTCATCTCTGGAGCATTTGATGGGCCATTCAAATTCGCCCTGAAGGCGCTGATGAA
GAGGCGCACATACCTTCTGGAGATGAATGGCTTCTAG-------------------------------------------
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-------------------------------------------------------------------------
>chr4D_1056
--------------------------------------------------------------------------------
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-------TCGACAGCGTGCCGGACTCGCTCGTGCTCCTCATCTTCAACAAGCTCGCCGACGCGCGTTCCCTCGGCCGCTG
CTCCGCCGTCTCGCGCCGCTTCAACGCGCTCGTCCCGCTCGTCGACGACGCCTGCCTCCACATCGACCGCGTCATCGC--
-CGCCGGCGACGCCGACGACGCGCTCGGCGCCTCGGGCGGCCCGCGCCAGCGCGGCGTCCTCTCCAGCCTCCTCAAGACC
GTGCTCCTCGCCGTGCTCAAGCCCTTCGGCCACTGCGACGCCGGCGCCAGGCCCGC------CGGCCACGCGGGAGGCAA
GCACGCGCCGCACCACTCCCCCGCGCAGGTGCTCAAGAACTTCAGCAGCATCCGCAACCTCCGCATGGAGCTCCCCGTCT
CCGACGTCGGCACCGACGACGGCGTCCTCCTTAGGTGGAAGGCCGTCTTCGGCACCACGCTCCAGAGCTGCGTCATCCTC
GGCGGGACAAGGCTGGACCA------CGCCTC---------GCACGCGCCCTC---CGCCTCCGTGGCCCCGGAAGAACA
CGACGCCTCGCAGGGGGACGACGACAATGGGAGCATACCGGAGTCCTTCTACACCAACGGCGGGCTGAAGCTGCGCGTGG
TGTGGACCATCAGCTCGCTCATCGCCGCGGCCACCAGGCACTACCTCCTCCGCGAGATCGTCAAGGAGCACCCCACCCTG
GAGCGCGTGGAGCTGACGGACGCGCACGGCCAGGGCATGCTCTGCATGGAGCGCCCGCAGCTCAAGGAGTTCACCGACAA
GCCGCTCGCCGCCGCCGCCGCCGCCAACCGCACGCAGGTGCCGGCCTGCAACATGAAGCTCCGGTACGCGCCGATGCTGG
AGCTGTCGGACGGGACGAGGATCCAGGGCGCCACTCTGGTGGTGATCAAGCCCGTGGGCGAGG---CCGGCGGCATCGGC
GGTGGGCGCAAGGAGCTGGACGAGTTCGTGGCCGGCGCCTTCGACGGGCCCTTCAGGGAGGCCGTGGCGATGCTCAGCAA
GCGCCGCACCTACCTGCTAGAGATGAACGGCTTCTA--------------------------------------------
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-------------------------------------------------------------------------
>chr3D_2482
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-------------------CGAGAGTGGCGAAAAAACAGACGAGCTCGCTTGCTCTCGGTACGTAGACCAACGGCTGAAC
GACGCGTCGTTAGAAGAATTAAATGCGATCGTATAGGCTGAGAAGGATACAACCGGTGGG-CACTACTGTATGGTGACGG
CTCCATCCAACATGACGACGCGATGACGGTACATTTCGGACATGTTCTGTTGGTACATGTATCGATACGTCCTTACATAA
TGATTTGTGACGGGGGGTCCGTCTCATAAACGGCTGTGCATAATAACAGATAAACATATATCACACCATCAGTCCACGCC
CGCCCCTCGTTTAATAATAAATATAAAAAGTAAATCTATCCCTTCAGACGCCGCACGAGTCAGAGAAACTCAAAGCTATG
GCGAT--------GACGGAGGCAAGAGGCTATGGATTCAAGTTCTCATCAGGTTCTGTTGATAGCTCTGTTCCTCGCGCC
GCTTTTTGCTGCTAATGACAACCGCTGTTACTAGATGCGCAGCCTCATAATCTTTTCCTACGTTTGAGCAGATTCCC---
--------------------------------------------------------------------------------
-------------------------------------------------------------------------
>chr2B_2483
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--------------------GAGAATGGCGAAAGAACAGACAAGCTCACTTGCTCTCGGTACGTAGACCAACGGCTGAAC
GACGCGTCGCTAGAAGAATTAAATGCGATCGTATAGGCTGAGAAGGATACAACCGATCGGACACTACTGTACGGTGACGG
TTCCATGCAACATGACGACGCAATGATGGTACATTTCGAACATAGTCTGTTAGTACATGTATCGATACGTCGTTACATAA
TGATTTGCGACGGGGGGCT-GTCTCATAAACGGCGTGTGCTC--AACAGATAAACATATATCACACTATCAGTCCACGCC
CGCCCCTCGTTTAACAATAGATATAAAAAGTAAATCTACCCCTTCGGACGCCGCACGAGTCAGAGAAGCTCAAAGCTATG
GCGA--------CGACGGAGGCAAGAGGCTATGGATTCAAGTTCTCATCAGGTGCGGTTGATAGCTCTGTTCCTCGCGCG
GCTTTTTGCTGCTAATGACAACCGCTGTTACTAGATGCGCGGCCTCATAATCTTTTCCTACGTTTGCGCAGATTCCC---
--------------------------------------------------------------------------------
-------------------------------------------------------------------------
>SNPs
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSS-----------------S-------------------S------------------------------------
-----------SS----------------------------S-----------------------------S--------
------------------------------------------S---S---------------------------------
---------------------------------------------------------------SS---------------
------------------------------------------------------------S------SSSSS--------
--------------------------------S--S---------------S--------------S-------------
--------------------------------------------------------------------------------
-----------------------------------S----S---------------------------------------
---------------SSS--------------------------------------------------------------
------S--------------------------------------S--SSSSSSSSSSSSSSSSSSSSSSSS--------
------------S------------------------------------------S------------------------
-------------------------------------------------------------S------------------
--------S----------------------S------------------------------------------------
--------------------------------------------------------------------------------
---------------S---------------------------------------------------------------S
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------S---------------------------------------S----S--------
---------------------------------S----------------------------------------------
-------------------------------------------------S------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------S-------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------S-----S--------------------------S-----------------------------
---------------------------------------------------------------S----------------
---------------SS---------------------------------------------------------------
--S-------------------------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS---------
-S------------------SSSSSSS-----------------------------------------------------
--S--S--S------------------S-SSS--SS--------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------------------S---S-------S----
---S--------------------S--S-------S-----S-S-------------------------------SSSSS
SSSSSSSSSSSSSSSSSSS------S------------S-----------------------S-----------------
------------S--------------------------------------------------S--S----SS-------
-----------S---------------------S----------------S-----------------------------
-----------S--------------------------------------------------------------------
-------------------------------------------------S-----S------------------------
----SSSSSSSS------------S------------S----------S--S----------------------------
--S----------------------------------------S------------S--------------------SSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
>forward_104
--------------------------------------------------------------------------------
----CTGCCACGTCCTCTGTTTCT--------------------------------------------------------
--------------------------------------------------------------------------------
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>reverse_2258
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-----------------TGATGCTTTTGTCTCGGGCG-------------------------------------------
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-------------------------------------------------------------------------
>forward_1049
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--------------------------------------------------------------------------------
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---------------------------------------------------------------------CCTCCCCCGTC
AAATTCGTT-----------------------------------------------------------------------
--------------------------------------------------------------------------------
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>reverse_2586
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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-------------------------ACTCTTGCTCGCACAATCCA-----------------------------------
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-------------------------------------------------------------------------
