>input_sequence_61766
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---------------------ATGGTAGAGTAGTAGAC------ATATAT----------AGGACTTTTGTTTCCTATGT
TGTTACCTTTTGTACTTGTTCTTCCTTGGTGCACTATCACATAGTTG----TACTGACAACTCTCTTGTTGCAGGCAGAG
GCATCGAATGGGCGAACTTCAAAGGTCAAGAAAGCAGTGGTGGAGGAGAAGCTAGAACCCAAGAACAAGGTAAACAAACT
GAATGATATTGCAGGCAGCCAGGTTCTCATCGGGGAAATTAAAGGACCAAGAAGAAAACCAGAGAGGACTTAATTACTAT
TCTCTTGTTGCAGGGAAAGGCATCGAATGCCCAAAGTTCGAATGGCGCACAAGGCTCTGACAACAGAGAACTAAAGAGGA
CTATTGAAGACCTGGTGGGCAAGATTAACACACTGAATGTTGACATTGAAGCATCCCAGAAGCTCATCGAGAAAATGACC
AGGGAGAAAAATAAAGTGGGAGAGGAGATCACAAAGCAGCAGAAGAAGAAAACGGAGACGGGAACAGAGATTGAAGAGCT
GGACTTGAAGAAAGGAGAGTTGGTGGGGAAGAAAGGAAAGCTGGGAGAGGATATTAGAAATCTAGACCTGCAGAAAGAAG
AACTCGTGAAGGAGAAAAGAAAGCTGCGACAGGATATTGAAAATCTAGACTTGAAGAAAAAAGAACTGGTGGATGAGAAT
AGAAAGCTGGGAGAGGATATCACAGAGCTGGAGAAGAAGGAAATAATGACTCAAACTGAGATTGCAACTCTGAATAAGGC
GGAAACTGAACTGGTGGTGAAGAAAGGAAACTTTGCGAAGGAGCTAGACGAGAAAATAAAGATGAGGTTTGATAACCTGG
AGAAGGGGAAGCAGGAAGTGGTGGAGGAGAATCAGGAGCTGATTAAGGACAAAAGGAAGCTGGCCAAGGACAACGAGAAA
CTGAGGAAGGACAACGAGAAACTCAAGAAGGACAAAGAGGAGCTGGTGGGTCAAGAAGGAAAGACGAGAGAGGAGATGCA
AAAGAGGTACGACAAGCTGCAGGACAAATACGATGGGAGATGCTGCAGCTGTTGCTCAATTTGTTAA-------------
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>chr7D_1_TraesCS7D01G519700
TCTACCTATCACTGAAATAGCTATCGTTCGTCACTTTGAGAACGTACGACA-GAATGCCAGCAGGCGGACGGACCGGCTG
CCCGTTTGAATGCAGTAGATATCAGTCCCTTCTCGTCCTCTCCTTGCTCCG-CATTGAACAGGCAGGAGACCGGAACGTG
AAGCCGCCGGCATTCTCGGCCGTTGCTCATGTTCAATGCCGGAGCGACGTGAAAGATCGCGTCCACTCTAGG-CCGCGTG
AATGCGGCATTAATGCTTTTGGGCGGCATGAATAAGCGGCAACTACTTCAGACGGGAAAGGGCACGGGGTGAGAGAGAGG
CTTTAGAGTGGGATTGG-----CAGACGCGTGCAAGGCAGCGGTCCCGATGACTGCAAAGCCCACCGCTTCTAATTTGCG
GACCGGTCCGGGGACGAATACGGAGAAGTGTTGGTTCAAACGGGCTAGTCCGGGTGGACAGGAGTGGTTTGAGGGTCAGT
GTTGAAGATGCCCTAATGGCCATATGTGCGTAGCCGAGGCAAGTGTTTGCTTCCTCGCGTGCCGAAGGCGACAGAGGGTA
TTCAGGTCTCCTCCACATGCACGCACGCATGCAGCCTCCGCTTTCGTTCTCACTCCGACACCCCATCACCACTTGGTAGT
ACTATTTTTCTAGCAACGCTGGTGAAAAAGTGTTTTCGGTGC-------TGTAGTACTAAATTCCTGACATC---GAACC
TTTAATCATGTCGTAGTACGTACTAAATTCATACAT--TACAAATCCATCAATTTACGCGTGTTGACGAACTTGCCTAGT
C--------G-TCATCTAATATGACCTGCAAAAGGAAATGGAGC------------------------ATGGCAACGAGC
CTTTTGATCTAAGAAAATAGGAGTGGGCGTAGCTGGGAAACCGCAGGGAATATTACAA----AGACGGGACATTGAGCTA
CAGATCGCGGCTATATAAGGGATGGCCGGCCAGGATTCATTGATCAAACCAGGAAGCAAAGGTTCAAGG----ACACAGA
CACACATCACAAATACACACAATGGTAGAGTAGTAGAC------ATATAT----------AGGACTTTTGTTTCCTATGT
TGTTACCTTTTGTACTTGTTCTTCCTTGGTGCACTATCACATAGTTG----TACTGACAACTCTCTTGTTGCAGGCAGAG
GCATCGAATGGGCGAACTTCAAAGGTCAAGAAAGCAGTGGTGGAGGAGAAGCTAGAACCCAAGAACAAGGTAAACAAACT
GAATGATATTGCAGGCAGCCAGGTTCTCATCGGGGAAATTAAAGGACCAAGAAGAAAACCAGAGAGGACTTAATTACTAT
TCTCTTGTTGCAGGGAAAGGCATCGAATGCCCAAAGTTCGAATGGCGCACAAGGCTCTGACAACAGAGAACTAAAGAGGA
CTATTGAAGACCTGGTGGGCAAGATTAACACACTGAATGTTGACATTGAAGCATCCCAGAAGCTCATCGAGAAAATGACC
AGGGAGAAAAATAAAGTGGGAGAGGAGATCACAAAGCAGCAGAAGAAGAAAACGGAGACGGGAACAGAGATTGAAGAGCT
GGACTTGAAGAAAGGAGAGTTGGTGGGGAAGAAAGGAAAGCTGGGAGAGGATATTAGAAATCTAGACCTGCAGAAAGAAG
AACTCGTGAAGGAGAAAAGAAAGCTGCGACAGGATATTGAAAATCTAGACTTGAAGAAAAAAGAACTGGTGGATGAGAAT
AGAAAGCTGGGAGAGGATATCACAGAGCTGGAGAAGAAGGAAATAATGACTCAAACTGAGATTGCAACTCTGAATAAGGC
GGAAACTGAACTGGTGGTGAAGAAAGGAAACTTTGCGAAGGAGCTAGACGAGAAAATAAAGATGAGGTTTGATAACCTGG
AGAAGGGGAAGCAGGAAGTGGTGGAGGAGAATCAGGAGCTGATTAAGGACAAAAGGAAGCTGGCCAAGGACAACGAGAAA
CTGAGGAAGGACAACGAGAAACTCAAGAAGGACAAAGAGGAGCTGGTGGGTCAAGAAGGAAAGACGAGAGAGGAGATGCA
AAAGAGGTACGACAAGCTGCAGGACAAATACGATGGGAGATGCTGCAGCTGTTGCTCAATTTGTTAACAGTCTCAGTACG
CGCTATTACTACGTGATTTCGACATATGTACTAGTGATGCTGCTGTGTACGCAACATGGGTACTTGTCCCTTTTAATTTT
CGTCTACGCATGGCTATGCGTTTCTTTCCACGTATTGTAAGCTCCTTCAAAAATTGTTGTCTACCACTTTATTTATCTAT
CCTTTGGGTGTAGTAATACCTTGTGCTTTCATTAAGACAAATGGGCTGGACTGAACTGATGAATTCCTACATACATAACT
GAACTCCAAGTCAATTGTACTGCATTTATCATCTGATGAAGCCCTCAGTTGCATCGTGCTCGTGGCTCGCCGGATTCGGC
CTAGTATACGGTCGTTTTAACCAGCAGGGAGCAGTACTGCCCATACTGGTACTTTGGGGCGTCGGCCGTCTCGGGTAGCA
TGCTAGATGACCCGGCAGCACCGGGGTGCCAGTGAGCGGAGACATCCACAGGGGCTTATAGCTCCTGTGTGACACATTTC
AC-------------------------------------------GTGAAACGCTTCAGAAGCCCAAATAGCCAAGGCCC
ACTCGGGCGATTAAAATGGTCGTCAACGGGAGTGAGATTATGTTTAAGACATGTGGATCCCACTTGACAGAGCATCTAGT
TACGGCCCCATTTGGCAGTGCATCAGGTGAGATGTGGCTCCGTGCCTGTCTGAATCAGGTGAGCAGTGACCCGTTGCTCC
CTCCTCTTCGTTCTCGGCGGTGAGACGGCG------CCGGAGC-TTTTTTTCTCGGTGACAGCAACGGCGGACCTGTCGT
TCTCGGCGACGGCGGCGGCTGTGGTGAGTAAATCCTGAACCCTTGTCCTGTTCCCCTCCTTGTCGAGTTAGATCTCACCG
CATCGCCTCTGTTTCCTCTGTTTTTGGTCGATTTGATCCAGATTT-GGGTGCGGGGGAGGGGGGCTGACCGCGATGGAGC
CGCCAGAGACAACAACGTCGACTAGGTATGTGCATCCTTTCCAACCTATACGATTTGTGCGTTGTCTGCTTCCGCTAG
>chr7B_4
---ACCTTTCACTGAAGTAGCTACCATTCGTCACTTTGAAAACCTACACCAGGAATGCCAGTGGGCGGATGGACGGGCTG
CCCATTTGAATGCAGTAAATAGCAGGCCCTTCCCGTCTTCTCATTGCTCCGACATTCAACAGGCGGGAGAGCGGGACGCA
AAGCGGGCGGC--TCTCGGCCTTCGCTCATGTTCAATGTCGGAGCGATGTGAGAGGTCGTGTCCACTTTAGGTCAGCATG
GATACGGCGGTAAAGCTCCTGG----------------------ACTTCAGGTGGGAAAGGGCGCGGAGTGAGGGAGGGG
GTTTTGGGTGGGTCTAGATTATCAGACGCGTCCAAGGCAGCGGTCCGGATGACCGCAAAG-CCCCTGCTTCCGATTTGCG
GACCGGTCCGTGGACAGGTAAGGGAAAGTGTTGGTTCAAACGAGCTGGTCCGGACAGACAAGAGTGGTTTGACGGTCAGC
GTTGAAGATGCCCTAATGACCATATGCTCGTAGCCGAGACACGTGCTTGCTTCCTCGCGTGCGGAAGGCGACAGAGGC-A
TTCAGGTCTCCTCCGCATGCATGCACTTATGCAGCCTCTGCTTTCGTTCTCTCTCCGACTCCCCATCACCACTTGCTA--
-CTACTTTTCTAGCAAGCTCGTGAAAAAAGTGTTTTCCGCTC-------TGTAGTACTAAATTCCTGACATT---GAACC
TTTAATTACATCGTAGTATGTACTA-ATTCATACAT--TACATATCCACCAATTTGCGCGTGTTGACGAACTTGCCTAGT
C--------G-TCATCTAGTATGACCAGCAAAAGGAAGTGGAGC------------------------ATGGCGGCGAGC
CTTTTGATTTAAGAAAATAGTAGTGGGCGTAGCTAGGAAACCGCAGCGAATAGTACAA----AGAAGGAACATTGAGCTA
CAGATTGCAGCTATATAAGTGATGGCCCGCCAGGCTTCATTGATCAAAGCAGGAAGCAAAGGTTCAAGG----ACACAGA
CACACATCACAAATATACACAATGGTAGAGTACTAGCCATATGTATCTAT----------AGGACTTTTCTTCCCTATGT
TGTTACCTTTTTTACTTGTTCTTCCTTGGTGCACTATCACATATATAGTTTTACTGACAATTCTCTTGTTGTAGGCAGAG
GCATCGAATAAGAGCAAG---------AAGAAAGCAGTGGTGGAGGAGAAGAAAGAACCGACGAACAAGGTTAACAAACT
GAATGATATTGCAGGCACCCAGGATCTCATCAAGGAA-----AGGACCAAGAAGAAAACCA-------------------
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>chr7A_369
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--------------------------------------------------------AAAGCCCCCTGCTTCCGATTTGCG
GACCGGTCCGGGGACGAATACGGGAAAGTGTTGATTCAAACTGACTGGCCCGGACGGACACTAGTGGTTTGACGGTGAGG
ATGCT-------CTAATGGCTATATGCGCGTAGCCGAGACACGTGTTTGCTTCCT-GCGTGCGGAAGGCGACAGAGAC-A
TTCATGTCTCTTCCACATGCATGCACGCATGCAGCCTCCACTTTCGTTCTCTCTCGGACTCCCCATCACCACTTGGTA--
-CTACTTTTCTAGGAACGCGCGTGAAAAAGTGTTTTCGGTTCTGTAGTGTGTAGTACTAAATTCCTGACATTATTGAACC
TTTAATCATGTCATAGTACGTACTAAATTCATACATTATACATATCCACCATTTTGCATGTATTGACGAACTTGCCTAGT
TATTGCTTTG-TCATCTAATATGACCTGCAAAAGGAAGTGGAGCTGCT---TTCTTATGAAATGGAACATGACGACGAGC
CTTTTGATCTAGAAAAATAGTAGTGGGCGTAGCTAGGAAACCGCAGCGAATATTACAA----AGACGGGACATTGACCTA
CAGATTGCGGCTATATAAGTGATGGCC-GCCAGGCTTCATTGATCAAAGCAGGAAGCAAAGGTTCAAGGACACACACACA
CACACATCACAAATACACACAATGGTAGAGTTGTAGAT------A-----------------------------------
--------TTCGTACTCATTCTTCCGTAGTGCACTATCACATAGTTG----TACTGACAACTCTCTTGTTGTAGGAAGAG
GCATCGAATGGCCGAACTTCGAAGGGCAAGAAAGCAGTGG---------AGCAAGAACCGAAAAACAAGGTTAACAAATC
GAATGATATTGAAGGCACCCAGTATCTCACCGGGGAA-----TGGACCAAGAAGAAAACCACAAAGG-------------
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>chr1A_634
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-CTATTTTTCTAGCAACGCCCGTGAAGAAGTAGTGCTTTCGGT----TGCGTTGTACTAAATTCCTGACATC---GAACC
TTTAATCATGTTGTAGTACGTACTAAATGCATACGTTATACATATCCACTAATTTGCGCGTGTTGACGAACTTGCCTAGT
TATTGCTTTGGTCATCTAA-ATGACTTGCAAAAGGAAGTGGAGCTGCTTTCTTCTTATGAAATGGAACATGACGATGAGC
CTTTTGATCTAAGAAAATAGTAGTGGGCGTAGCTAGGAAACCGCAGCGAATATTACACACATAGACGGGGCGTTGACCTA
CAGATTGCGGCTATATAAGTG-TGGCCGGCCAGGCTTCATTGATCAAAGCAGGAATCAAAGGTTCAAGG----GCACGGA
CACACACCACAAATACACACAATGGTAGAGTAGTGGACCTTTTGTTATATATATAGAGAGAGAACTTTTGTTCATTATCT
TGTTACCTTTCGTACTTGTTCTTCCTTGGTGCACTATCACATAGTTG----TACTGACAATTCTCTTGTTGCAGGCAGAG
GCACCGAATAAGAGCAAG---------AAGAAAGCAGTGGTGGAGGAGAAGAAAGAACCGAAGAACAAGGTTAACAAACT
GAATGATATTACAGGCA---------------------------------------------------------------
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>chr5D_2530
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--------------------------------------------------GGGGCCAATAGCTCCTGTGTGACACATTTC
ACGTGAATTGGAAGGAGTGCGACGTGGTTGACGAAAATAGTTGTAGTGCAACGCTTCAGAAGCCCAAATAGCCAAGGCCC
ACTCGGGCGATTAAAATGGTCGTCAACGGGAGTGAGATTATGTTTAAGACATGTGGGTCCCACTTGACAGAGCATCTAGT
TACGGCCCCACTTGGCAGTGCATCAGGTGAGATGTGGCTCTGTGCCTGTCTGAATCAGGTGAGCAGTGACCCGTTGCTCC
CTCCTCTTCGTTCTCAACGGTGAGCCGGCGACGGCGCCGGAGTTTTTTTTTCTCGGTGACAGCAGCGGCGGAGCTGTCGT
TCTCGGCGACGGCGGCGGCTATGGTGAGTAAATACCGAACCCTTGTCCTGTTCCCCTCCTTGTCGAGTTAGATCTCACCG
CATCGCCTCTGTTTCCTCTATTTTTGGTCGATTTGATCCAGATTT-GGGTGCGGGGCAAGGGGGCTGACCGCGATGGAGC
CGCCAGAGACAACAACGTCAACTAGGTATGTGCATCCTTTCCAACCTATGTGATTTGTGTGTCGTCTACTTCCGCTAG
>chr7D_2562
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---------------------------------------------GTGCAACGCTTCAGAAGCCCAAATAGCCAAGGCCC
ACTCGGCCGATTAAAATGGTCGTCAACGGGAGTGAGATTATGTTTAAGACATGTGGGTCCCACTTGACAGAGCATCTAGT
TACGGCCCCACTTGGCAGTGCATCAGGTGAGATGTGGCTCCGTGCCTGTCTGAATCAGGTGAGTAGTGACCTATTGCTCC
CTCCTCTTCATTCTCAGCGGTGAGCCGGCGACAGCGCCGGAGC-TTTTTTTCTCGGTGACAGCAGCGGCGGAGCTGTCGT
TCTCGGCGACGGCAGCGGCTGTGGTGAGTAAATCCTGTACCCTTGTCCTGTTCCCCTCCTTGTCGAATTAGATCTCACCG
CATCGCCTCTGTTTCCTCTGTTTTTGGTCGATTTGATCCAGATTT-GGGTGCGGGGGAGGGGGGCTGACCGCGATGGAGC
CGCCAGAGACAACAACGTCGACTAGGTATGTGCATCCTTTCCAACCTATGCGATTTGTGCGTCGTCTGCTTCCGCTAG
>chr7D_2562
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---------------------------------------------GTGCAACACTTCAGAAGCCCAAATAGCCAAAGCCC
ACTCGGGCGATTAAAATGGTCGTCAACGGGAGTGAGATTATGTTTAAGACATGTGGGTCCCACTTGACAGAGCATCTAGT
TACGGCCCCACTTGGCAGTGCATCAGGTGAGATGTGGCTCCATGCTTGTCTGAATCAGGTGAGCAGTGACCTGTTGCTCC
CTCCTGTTCGTTCTCGGCGGTGAGCCGGTGACGGCGCCGGAAC-TTTTTTTCTCGGTGACAGCAGCGGTGGAACTGTCGT
TCTCGGCGACGGCGGCGGCTGTGGTGAGTAAATCCTAAACCCTTGTCATGTTCCCCTCCTTGTCGAGTTAGATCTCACCG
CATCGCCTTTGTTTCCTCTGTTTTTGGTCGATTTGATCCAGATTTTGGGTGCGGGGGAGGGGGGCTGACCGCGATGGAGC
CGCCAGAGACAACAACGTCGACTAGGTATGTGCATCCTTTCCAACCTATGCGATTTGTGCGTCGTCTGCTTCTGCTAG
>chr7D_2562
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---------------------------------------------GTGCAACACTTCAGAAGCCCAAATAGTCAAGGCCC
ACTCGGGCGATTAAAATGGTCGTCAACGGGAGTGAGATTATGTTTAAGCCATGTGGGTCTCACTTGACAGAGCATCTAGG
TACGGTCCCACTTGGCAGTGCATCAGGTGAGATGTGGCTTCGTGCTTGTCTGAATCAGGTGAGCAGTGACCCGTTGCTCC
CTCCTCTTCGTTCTCGGCGGTGAGCCGGCGACGACGCCGGAGC-TTTTTTTCTCGGTGACAGCAGCAGCGGAGCTGTCGT
TCTCAGCGACGGCGGCGGCTGTGGTGAGTAAATCCTAAACCCTTGTCCTGTTCCCCTCCTTGTCGAGTTAGATCTCACCG
TATCGCCTCTGTTTCCTCTGTTTTTGGTCGATTTGATCCAGATTT-GGGTGCGGGGGAGGGGAGCTGACCACGATGGAGC
CGCCAGAGACAACAACGTCGACTAGGTATGTGCATCCTTTCCAACCTATGCGATTTGTGCGTCGTCTGCTTCAGCTAG
>chr5D_2562
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---------------------------------------------GTGCAACGCTTCAGAAGCCCAAATAGCCAAGGCCC
ACTCGGGCGATTAAAATGGTCGTCAACGGGAGTGAGATTATGTTTAAGACATGTGGGTCCCACTTGACAGAGCATCTAGT
CACGACCCCACTTGGCAGTGCATCAGGTGAGATGTGGCTCCGTGCCTGTCTGAATCAGGTGAGCAGTGACCCGTTGCTCC
CTCCTCTTCGTTCTCGGCGGTGAGCCGACGACGGCGCCGGAGC-TTTTTTTCTCGGTGACAGCAGCGGCGGAGCTGTCGT
TCTCGGTGACGGCGGCGGCTGTGGTGAGTAAATCCTGAACCCTTGTCCTGTTCCCCTCCTTGTCGAGTTAGATCTCACCG
CATCGCCTCTGTTTCCTCTGTTTTTGGTCGATTTGATCCAGATTT-GGGTGCGGGGGAGGGGGGCTGACTGCGATGGAGC
CGCCAGAGACAACAACGTCGACTAGGTATGTGCATCCTTTCCAACCTATGCGATTTGTGCGTCGTCTGCTTCCGCTAG
>chr3D_2562
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---------------------------------------------GTGCAACGCTTCAGAAGCCCAAATAGCCAAGGCCC
ACTCGGGCGATTAAAATGGTCGTCAACGGGTGTGAGATTATGTTTAAGACATGTGGGTCCCACTTGACAGAGCATCTAGT
TACGGCCCCACTTGGCAGTGCATCAGGTGAGATGTGGCTCCGTGCCTGTCTGAATCAGGTGAGCAGTGACTCGTTGCTCC
CTCCTCTTCGTTCTCGGTGGTGAGCCGGCGACGGCGCCGGAGC-TTTTTTTCTCAGTGACAGCAGCGGCGGAGCTGTCGT
TCTCGGCGACAGCGGTGGCTGTGGTGAGTAAATCCTGAACCCTTGTCCTGTTCCCCTCCTTGTCGAGTTAGATCTCACCG
CATCGCCTCTGTTTCCTCTGTTTTTGGTCGATTTGATCCAGATTT-GGGTGCGGGGGAGGGGGGCTGACCGCGATGGAGC
CGCCAGAGACAACAGCGTCGACTAGGTATGTGCATCCTTTCCAACCTATGCGATTTGTGCGTCGTCTGCTTCCGCTAG
>chr3D_2562
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---------------------------------------------GTGCAACGCTTCAGAAGCCCAAATAGCCAAGGCCC
ACTCGGGCGATTAAAATGGTCATCAACGGGAGTGAGATTATGTTTAAGACATGTGGGTCCCACTTGAAAGAGCATCTAGT
TAGGGCCCCAGTTGGCAGTGCATCAGGTGAGATGTGCCTCCGTGCCTGTCTGAATCAGGTGAGCAGTGACCCGTTGCTCC
CTCCTCTTCGTTCTCGGCGGTGAGCTGGCGACGGCGCCAGAGC-TTTTTTTCTCGGTGACAGCAGCGGCGGAGCTGTCGT
TCTCGGCGACGGCGGCGGCTGTGGTGAGTAAATCCTGAACCCTTGTCCTGTTCCCCTCCTTGTCGAGTTAGATCTCACCG
CATAGCCTCTATTTCCTCTGTTTTTGGCCGATTTGATCCAGATTT-GGGTGCAGGGGAGGGGGGCTGACCGCGATGGAGC
TGCCAGAGACAACAACATCGACTAGGTATGTGCATCTTTTCCAACCTATGTGATTTGTGCGTCGTCTGCTTCCGCTAG
>chr6B_2562
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---------------------------------------------GTGCAACGCTTCAGAAGCCCAAATAGCCAAGGCCC
ACTCGGGCGATTAAAATGGTCGTCAACGGGAGTGAGATTATGTTTAAGATATGTGGGTCCCACTTGACAGAGCATCTAGT
TACGGCCCCACTTGGCAGTGCATCAGGTGAGATGTGGCTCCGTGCCTGTCTGAATCAGGTGAGCAATGACCCGTTGCTCC
CTCCTGTTCGTTCTCGGTGGTGAGCCGACGACGGTGCCGGAGC-TTTTTTTCTCGGTGACAGCAGCGGCGGAGCTGTCAT
TCTCGGCGACGGCGGCGGCTGTGGTGAGTAAATCCTGAACCCTTGTCCTGTTCCCC---TTGTCGAGTTAGATCTCACCG
CATCGCCTCTGTTTCCTATGTTTTTGGTCGATTTGATCCAGATTT-GGGTGCGGGGGAGGGGGGCTGACCGCGATGGAGC
CGCCAGAGACAACAACGTCGACTAGGTAT-TGCATCCTTTGCACCCTATGCGATTTGTGCGCCGTCTGCTTCCGCTAG
>chr3D_2563
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----------------------------------------------TGCAACGCTTCAGAAGCCCAAATAGCCAAGGCCC
ACTCGGGCGATTAAAATGGTCGTCAACGGGAGTGAGATTATGTTTAAGACATGTGGGTCCCAGTTGACAGAGCATCTAGT
TACGGCCCCACTTGACAGTGCATCAGGTGAGACGTGGCTCCGTGCCTGTCTGAATCAGGTGAGCAGTGACCCGTTGCTCC
CTCCTCTTCGTTCTCGGCGGTGAGCCGGCAACGGCGCCGAAGC-TTTTTTTCTCGGTGACAGCAGCGGCGGAGCTGTCGT
TCTCGGTGACGGCGGCGGCTGTGGTGAGTAAATCCTGAACCCTTGTCCTGTTCCCCTCCTTGTCGAGTTAGATCTCACTG
CATCGCCTCTGTTTCCTCTGTTTTTGGTCGATTTGATCCAGATTT-GGGTGCGGGGGAGGCGGGCTGACCGCGATGGAGC
CGCCAGAGACAACAAGGTCGACTAGGTATGTGCATCCTTTCCAACCTATGCGATTTGTGTGTCGTCCGCTTCCGCTAG
>SNPs
SSS----S--------S------S-S-------------S---S---SS------------SS------S----S-----
---S-------------S---S---S------S----S----S-------------S-------S-----S---S---SS
----S-S----SS--------S-S--------------S--------S----S--S---S-------S------S--S--
S--S----SS---S---SS---SSSSSSSSSSSSSSSSSSSSSS-------SS----------S---S-----S---S--
S---S-S-----SS-S---------------S--------------S------S---------S-S-----SS-------
-----------------------SS---------------------S------SS-----S-----------S------S
--------------------------S-----------S--S--------------------S--------------SS-
---------------------S-----------------------------S-------S------------------SS
S------------------S------------------------------------------------------------
------------------------------------------S-----S------S------------------------
-------------------------------------S-----------------------------------S------
--------------------S-------------S-----------S---------------------------------
-----S-------------S--------------S-------------S-------------------------------
------------------------------------------------------------------------S-------
--------------------------------------------------------------------------------
--------------------S----S--------------------------S------S-----------S--------
-----------------S-----S-------------SSSSS-------------------S-S---SSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS-----SS-----------------------
------------------------------------------------S-------------------------------
--------------------------------------------------------S-----------------------
----------S---------------------------------------------------------------------
------------------------S---------------------------------------S-------S-------
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-------------------------------------------------S------------S---------------
>forward_123
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-----------------------AGTCCCTTCTCGTCCTCTCC-------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------------------------
>reverse_1369
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------TGCAGGGAAAGGCATCGAAT----------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------------------------
>forward_270
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------TAATGCTTTTGGGCGGCATG--------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------------------------
>reverse_1392
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------CAAAGTTCGAATGGCGCACA-----------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------------------------
>forward_1388
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------TGCAGGGAAAGGCATCGAAT----------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------------------------
>reverse_2547
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------------CGTCTCGGGTAGCA
TGCTAG--------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------------------------
