>input_sequence_61758
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-----------------------------------------ATGGAGCGCCTGCCGGCGGAACTCGTCTCGGCGGCGTTC
GCCGGCACCACGCCACGTGACGCCGGTCGTGCCGCCATGGTCTCCACAGCATTCCGCGCTGCAGCCGACTCCGACATCGT
TTGGGCCCGCTTCCTGCCGCCCCTCGAGCCGCTGGCCCCCGAGCCGCAGTCAAAAAAGGACATGTTCTTACGCCTCTTGG
ACGGCCCCGTCCTCCTCCGAGACAGGCTCATGG----------TACGTGCATGCCCATGGCGCCCAACTCCGAGACATAT
TCATCGCACTAACTGATTGCTTTGCTTTGGTGATGCGCAGACTATGTGGCTGGACAGGGAGACCTTCGCCAAATGCTACA
TGCTGTCGGCGAGGAATCTGTTCATCGCGTCGGGCCACATGCCGCAGCACTGGAGCTGGATCCCTCTCTCCGACTCCATG
TTCGCGCTCGCTCTTCACACCTTCCTATAGTATTCCGTTATTTGATGCCCTTATTATTACAGCCAACGATATCTATATGT
ACGTACGGAGCTACGTCAAGAATAGTCTTGAAAAGT--------------------------------------------
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-------------------------------TAAGAGTACCAAGTTATAAAATTTTGCTTTCTAACACTTTTGCCTCTGA
TTGGTTTTTCGTCCTGATTACAGATGATAACCCTAGCTA----TGTGTGCCACAGGTTCTCTGAAGGGGCTCAACTAAAC
AGTGTGACATGGCTGGAAATCCGTGGAGGCATACACACCGACATGCTCACCCCAGACTCCAAGTACGGGGCTTACCTCGT
GTTTAAGAGGACCCAAAATTTCAGTGGGTTCAATTATCCAATCCAGAAGGCCACGCTCTACTTTGGACAAATAATGGAAT
ATACCAGTCCGGTTCTCCTTGGTGAGAATTGGACGCCGCCGCCAGAACTGGGTGTAGCTCAGCCTCAGCGCAGAGCCGAC
GGTTGGATGGAGATATCGCTGGGTCACTTCCACACGAGCGGGAATGAATTATATGCTGAGATGTCCTTCAGCCTGATGGA
GACGGAAGGAGAAGTGACACAGAAGCGTGGTCTGATCGTGCATGGCATTGAGATCAGACGTGAGAAATCAGGATGA----
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>chr4A_1_TraesCS4A01G320400
ACCTTGATGATGCCATCATAGGAGGAGGAGATGTTCAGGACTGAATCCTCACTGGTCTCATCGCTCCACGACACCATGGC
ACCGGGGAGCAGCAGAATGGCGGTCGGTGGTGTGGCGGCGCCGGGGAGGAAGAACAGAGTAAGGAGAGGGCGAGGCAGAG
GCGAGAGTGTGAGCAGAGAGCTGGATCGATCCAATTTTTACCCACACGGCGGAGCAGTAGCGGCCGCCACGCCGTTGCCA
CTGTAGCACCGTCAGACGGCGTGAGCTTGCGGCCGTGACGCCACATAGACAAAACAAGGCCCCGCCTATCATAATAGAGG
TTAAACTGCCCAAACAGACGGTTAGGTGTTTTCTGCAAATGATTAGGCGTGAAATCAGCATTTTCTGGCACAAAAACGTA
GAAGAGTCTTTTCTGCAACCCTAGGCTTCAATGTGGTGATTTTTTGCAATTCACTCCTCTCGATGCCTGGTTGGCTGGT-
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-----------------------------------------------------------------------TGGCATTTG
AACGTGAGTGGTCGATTTGAGGCTGAGTGCAAAAGATAGCACAT-ATCACATGCACGCGTGCCTTTGAGGTTGAGTGCCA
AAGCTAGCGAATAAAGCATGCAGTGGAGGATTTGATGGCGCCGATGGTGTGGT--GTCAAAACAACGGCCGATGTATCTG
TCGATT-TGAGGTGAATTTGTGAGTTTGTGGGCAGCACTGGACTGGATGAGAGATTGGATCCGTGGTGCATGCTACAACT
GCCGATATGGGCATCGCATCCAGTTCGTCCTGTTGGAGCAGAATCATATTCCGCGCGTGATCTCCAATGAATCCAATCCA
ACTGCCGAAAAGCTAGCTAGGCTTGCTTGTCCGTCCCTCTCTCACAGTGCAGCTCTCTCCAAGTCGGTTGTAGACACTAG
CTATAAAGGGACATACAC-----AGGAGCTCCAAGTTCTATCCAACACACACAGTACGTGTAGCTAGATAGCTAGTGCAG
CTCGCACAGGCCTTATCCAAGAGAAGAGACCAATCGAACCGATGGAGCGCCTGCCGGCGGAACTCGTCTCGGCGGCGTTC
GCCGGCACCACGCCACGTGACGCCGGTCGTGCCGCCATGGTCTCCACAGCATTCCGCGCTGCAGCCGACTCCGACATCGT
TTGGGCCCGCTTCCTGCCGCCCCTCGAGCCGCTGGCCCCCGAGCCGCAGTCAAAAAAGGACATGTTCTTACGCCTCTTGG
ACGGCCCCGTCCTCCTCCGAGACAGGCTCATGG----------TACGTGCATGCCCATGGCGCCCAACTCCGAGACATAT
TCATCGCACTAACTGATTGCTTTGCTTTGGTGATGCGCAGACTATGTGGCTGGACAGGGAGACCTTCGCCAAATGCTACA
TGCTGTCGGCGAGGAATCTGTTCATCGCGTCGGGCCACATGCCGCAGCACTGGAGCTGGATCCCTCTCTCCGACTCCATG
TTCGCGCTCGCTCTTCACACCTTCCTATAGTATTCCGTTATTTGATGCCCTTATTATTACAGCCAACGATATCTATATGT
ACGTACGGAGCTACGTCAAGAATAGTCTTGAAAAGT--------------------------------------------
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-------------------------------TAAGAGTACCAAGTTATAAAATTTTGCTTTCTAACACTTTTGCCTCTGA
TTGGTTTTTCGTCCTGATTACAGATGATAACCCTAGCTA----TGTGTGCCACAGGTTCTCTGAAGGGGCTCAACTAAAC
AGTGTGACATGGCTGGAAATCCGTGGAGGCATACACACCGACATGCTCACCCCAGACTCCAAGTACGGGGCTTACCTCGT
GTTTAAGAGGACCCAAAATTTCAGTGGGTTCAATTATCCAATCCAGAAGGCCACGCTCTACTTTGGACAAATAATGGAAT
ATACCAGTCCGGTTCTCCTTGGTGAGAATTGGACGCCGCCGCCAGAACTGGGTGTAGCTCAGCCTCAGCGCAGAGCCGAC
GGTTGGATGGAGATATCGCTGGGTCACTTCCACACGAGCGGGAATGAATTATATGCTGAGATGTCCTTCAGCCTGATGGA
GACGGAAGGAGAAGTGACACAGAAGCGTGGTCTGATCGTGCATGGCATTGAGATCAGACGTGAGAAATCAGGATGAACGC
GTGCTGCTTCAGACTTACGCATCTACTTCTATTTACCTTACTTCCAAAAGCAAGGGCATCGCTATTAGAACTCGATACCG
TAATGTAAATTTCAACTTGAGTGGCATTGAAACATTGTGTATTTTTTAATTCGTATATTTTTGGGAAAAAAAATCATGTT
TTAATTATATACTTATTGTGAACTTGGTTAAGGCTTGCAATCAACAAGTTACCCTGATCTCAGCACTCTAGGGGCATTTC
TGCTTTTTCACCAGCCCACAGTCATTTTCACAACTACATTGTTAAACAACTAACCTTAACTGTAGAAACTTCCTCAGCAC
AGCAGCTTTGCCATCACAGTCCATAGCTGGTTCTATCGAAGCTGCAGCCGAAACAAACAAGACCTTATTCCTGTTGGCCA
AAGCTTGGTCTTGGGCACATTGCCTATTTTCTCGTGCCCTTTTCCCCTTGTGTGCGCCTCACAGTCTCTAGTGTTAACTG
ATCAACAGCTTGACATGCTATAAACTGTTCCTCCCCTTTCGCATGTTTAATTGTCACGACCATGGTTTGTCTTCGTTTTT
TCTCCCTCACATGTGTGTCAGCATGTCACCTCAGAAGTGTCATCTTCTTATCGCTGAGATTGTGGATGTAGCAATCATAG
GTTGTGCTTCTTTTGTGCCTCCTTTCAACCACACCACGCACCATGGTAATAGCCTATCATCACTTCTTTCCCCGTGATTT
ATATGTAAACATATCAAATAGGATGTTTATATGTAAAATTTGCAAATCTCGTACACTGTGGAACATAGTCTACTCCTGGC
CGGGTAAGGAAAGTATAGATGCACGCATTGTGATGTGATGTAGACTATGGTGGATATGATAACAACTGGTTTGTTTCATT
TCTATCCAGCCGAGGGGAAACAATAGGTTCTGATGCCCGCCAAAAAGAAGTTGACACGTAAAATAAGGTTCTGATGTGAT
GTAGCACTACATAGCCAAGTGTTAACTAATTGGTCC
>chr5B_475
ATTGCCTATTTCCCTGTGCCATTTTCCCCTTGTGTGGGCCTCACCGTCTATAGTGTTAACAGATGAACACCTTGACATGC
TGGAAGCCATTCCTTCCCTTTTGCATGTTTAATTGTCATGACCATGGTTTGTCTTTTTGTTTCCCTTACATGTGTGTCAG
CATCTCACCTCAGAAGTGTCATTTTCTTATCGCTGAGATTGTGGATGTAGCAATCGCAGGTTGTGCTTCCTTTGTACATA
GCCTATCATCACTTCTTTCTCGTACACTGTGGTACGTCGTAGTCTACTCCTGGCCGGGTAAGGAAAGTATAGATGCACGT
ATTGTGATGTGATGTAGACTACGGTGGATATGATAACAACCGATCCGTTTCATTTCTAATCCAGCTGAGGGGAAACAATA
GGTTCTGATTCCCGCCAAAAAGAACTTGACAGGTAACATAAGGTTCTGATGTGATGTAGCACTACATAGCCAAGTGTTAA
CTAATTGGTCTCGATTCTTCCTCGACGCTTTCCGGCTCCTTATTAGCTAGCGCATGGGCGCATGGGAGTACTTGCTAATC
GCAATCAAAATAGTTTAATCCTGTAATTCACCGGAGATAAAACTGTCCGTGTCAATTTGTATTCGATTCAGTAAGACGTG
TAATTATCCCAAAAGTGAATTTTTCTCGAGAAATTCACTTTGACTCATAGGTGTAGATGCACCCATTGTCTAAATACACA
TTTTAAAAAATAAAAAAAAATCAAGAAAAATCCCACGTGTACATCCAGACATTATATGTTCGTGCACAAAGTTTCGGTGA
AAAGGAATTTTTTTGTTGCCTGTGCAAAAAAGACAATTCTCGATGCTTGATTATAACTATTCAGGAGAAATTTTTTTATC
TTTTTTATACATGCCACAAAAAATGTTCTTTCGTTGCAAAATTTTGTGTGCGAACATAGAATGTCCAGAAGTACACACGA
AATTATTTTTCTGAATTTTTTAACATTATCAAATATGTTATATATATATATATATATATATATATATATATATATATATA
TATATAGGGAAAATGCATCCTACTACCGAGTGTAGTTACACCCATTTCTCATATACTAACATGTGGTACTATATACTCTA
CTTTATTATTTTTAATATGTTTATATACTATAACTAAGATACTGCAAAGCGAATTATATGAAAAATTGCAAGTGAGCCCA
TAATTTTATTGTATTTGTGAAATACGTACATATTTATACGTGAAATGAAGTATGCACAAAATATGGTACATACTACCAAA
AAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNACCTATGAGCCAA
AACAGCACTCTGTGATATTAAATTAATTATGGGCAAATCATGATCCGTTTATTCTTTCCAACAAATCCTTTTTTGTGTGC
ATCTTTCTAACAAATCCAGATATTTGTAATTACGCAAAAACAAAAAATCTAGATACTTGTAAATTTCTTAAATGACCTCT
AACATGGAATAGACGAGTTATCACCTAAAAATTACATCGAGTCATTCTTACTTTTAGAACAAAGCAATATGGTAATATTA
ATTAATTATTTTTTCCAATAACTTCCGATAAAAAAAATGTATGGTTAGAAAATACTCCCTCCGTCCTAAAATACTTGTCA
GAGAAATGAATAAAAATGGATGTATCTAGAACTAAAATACGTTTAGATGTATCAGTTTCTTCAATAAGTATTTTCGGACG
GATCCGGGAGGGGGTACACACTTCAGTGACCTTCAGACCGGTTCACAGCTGTGACCGGAGACGGCCAACTCTCACACCAA
AGATTGTGAAATCGTTTCTCCAGCACTCAAGACAAAATCATGAAGAAAAATGAGTCATGATAAGTACTACTCCCTCCGTC
CCGTAATAAGAACGTTTTTAACACTAATGTTGTGTCAAAAACGTTTTTATATTATAGGACAGAGGGAGTAGCTGCGTGGA
GCCACAGTGAACATAGACGATGTCACCACAACCAGGTGGATCCGTGATTCCCTTGCCTCTCGATGCCTGGTTGGCATTTG
AAT----GTGGTCGATTTGAGGTTGAGTGCAAACGATAGCACATCATCACATGCACGCGTGCCTTTGAGGTTGAGTGCCA
AAGCAAGCGAATAAAGAATGCAGTGGAGGATTTGATGGCAGCGGCAGCGGTTGCCGTCGAAACAACGGCCTA-GTATCTG
TCGATTGTGAGGTGAATTTGTGAGTTTGTGGGCAGCACTGGAGTGGATGAGAGATTGGATCCGTGGTGCATGCTACTACT
AGCGATATGGGCATCGCATCCAGTTGGTCCGGTTGGAGCAGAACCATATTCCGCACGTGATCTCCAATGAATCCAATCCA
ACTGCCG--AAGCTAGCTGGGCTTGCTTGCCCGTCCCTCTCTCACAGTCACA----------------------------
CTATAAAGGGACATACACTACACAGGAGCTCCAAGTTGTATCCAACACACACACA--GTGTAGCTAGATAGCTAGTGTAG
CTCG--CAGGCCTTATCCAAGAGAAGAGACCAAGCGAACCGATGGAGCGCCTGCCGGCGGAACTCGTCTCGGCGGCGTTC
GCCGGCACCACGCCACGTGACGCCGGCCGTGCCGCCATGGTCTCCACAGCATTCCGTGCTGCAGCCGACTCCGACGCCGT
TTGGGCCCGCTTCCTGCCGCCCCTCGAGCTGGTGACCCCCGAGCCGCAGTCAAAAAAGGACATGTTCTTACGCCTCTTGG
ACGGCCCCGTCCTCCTCCGAGACAGGCTCATGGACATGGTACGTACGTGCATGCTGATGGCGCCCAACTCCGAGACAGAT
TCATTG--CTAACTGATTGC-TTGCTTTGGTAACGCGCAGACTATGTGGCTGGACAGGGAGACCTTCGCCAAATGCTACA
TGCTGTCCGCGCGGAAGCTGTTCATCGCGTCGAGCCACATGCCGCAGCACTGGAGCTGGATCCCTCTCTCCGACTCCATG
TTCGCGCTCGTTATCAGTTTG-----------------------------------------------------------
---------------------ATAGTCTTGAAAAGAATAATTGCCTGGTTAAGGCTCTGTTCGGCAATCCTCCGCTCCTT
CGCCAGGGAGCGGAGCTGGCGGAGCACCCCTTCGGACGCTCGCCAAAATTGAACTGTACGCCGCTCCGCTCCGCGGCGGA
GTTACAGAGTGGAGTGATTCCGAACGGCCTCTAAGAGTACCAAGTTATAGAATTTTGCTTTCTACAACTTTTACCTCTGA
TTGGTTTT-CGTCCTGGTTACAAATGATAACCCTAGCTAGCTATGTGTGCCACAGGTTCTCTGAAGGGGCTCAACTAAAC
AGTGTGACATGGTTGGAAATCAGTGGAAGCATACACACCGACATGCTCACCCCAGACTCCAAGTACGGGGCTTACCTCGT
GTTTAAGAGGACCCAAAATTTCAGTGGGTTCAATTATCCAATCCAGAAGGCCACGCTCTACTTTGGACAAATAATGGAAT
ATACCAGTCCGGTTCTCCTTGGTGAGAATTGGACGCCGCCGCCAGAACTGGGTGTAGCTCAGCCTCAGCGCAGAGCCGAC
GGTTGGATGGAGATATCGCTGGGTCACTTCCACACGAGCGGGAATCCATTCTATGCTGTGATGTCCTTCAGCCTGATGGA
GACGGAAGGAGAAGTGACACAGAAGCGTGGTCTCATCGTGCATGGCATTGAGATCAGACGTGAGAAATCAGGATGAACGC
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>SNPs
-SSSSSSSSS-S--SSSSSSSSSSSSSSSSSSSS-SS-SSSSSSSSS--SSSSS--SSSSSSSSSSSSSSSSSSSSSS--
SSSSS-SSSSSS-SSSSSSSSS-SSS--SSSS-S-SSSS-S-SSS-SSSSSSSSSSSS--SSSSSSSSSSS-S-SSSS--
SSSSSSSSS-S--S--S-SSS-SSSSSS---SSSSSSS-SSSSSSSSSSSSS-S-SSSS-SS-SSSSSS-SSS--SSSS-
SSS--S--S-SSSSSSSSSSSSS-SSS--S--SSSSSSSSSSS-SSSSS-SSSS-SS-SSSSSSSSSSSS-S-SSSSS-S
S-SSSSSSSSS-SSS----SSSSSS-SS-S-SS-SSS--SSSS-SS-SS-S-SS--SSSSSSSS---SSSSS---SSS--
-SSSSSSS--SS-SS---SSSS-SSS-SSS-S--SSSSSSSSS--SSS--SSSS-SSSSSSSSSSSSS-SSSS-SSSSS-
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--SSSSS---------------S----------S----------------------------------------------
----S-----------S----------------------SS--SSS-S-SSSS-----S-----------S-S-------
------------------------------------------S---------------------------------S---
SS-----------------------S----S------------S----------S-------------------------
-------SS---------S----------S------------------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
-------------------------------------S---------------SSSS--------------------S--
----SS---------------------------S----------------------------------------------
--------------------------S-----------------------------S------------------SS---
-----------------------------S-S--S---------------------------------------------
------------------------------------------------------SS---------------------S--
----S-SS------------S----------S-S----------------------------------------------
-------S---S----S---------------S-----------------------------------------------
----------S-S-SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSS--------------S--------------------------------------------
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-------------------------------------------------S--------------SS------S-------
--------S-------S-----S---------------------------------------------------------
------------S--------S-----S----------------------------------------------------
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---------------------------------------------SS---S-------S---------------------
---------------------------------S----------------------------------------------
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
>forward_2405
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-----------------------------------------------------------------GCTGGTTGGCATTTG
AACGT---------------------------------------------------------------------------
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>reverse_4518
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-------------------------------------GAAGCTGCAGCCGAAACAAA-----------------------
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