>input_sequence_61734
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--------------------------------ATGGCGCCCAATGCGGCCGTTGCCCGAGTGCCCCTGGCGGTGACCATC
TTCGTGGCGGTCGCGACGAGCATGCTGCTGGCGCCCGCGGAGGCTGGCCTGTACAGCGACCGTGACGCGCTCTTGGCCCT
GCGGGGCGGCCTACAGGACCCTGACGGCGCGCTGCGTTCCTGGATCCTGGAGGTGAACCCCT------------GCGAGT
GGACCCAGGTCACCTGCGACCGCGTGGCCAACCGCGTCACCGAGATGTGAGTGAGGCC---ACACC---GATCCTTCTTC
CCTTCCATACTCCTTCCCTCGTATATTTCATTATTTCTGGACGCCTCGTCTTCTTCATCCCATTTTCAG--------TAC
------------------------AATCGGCCATGCGAACCTGTCCGGACCTCTGTCGCCGGAGCTGGGCAAGCTGGACC
AGCTAACCAAACTGTGAGCCTCTC------TCTCTGA--CCCATCTGTTTCTGCCCGT----------------------
---------TGATGGATCAAAATGTTTTAGCTCTTATACGTATATGGCATGTAATGAGCACAGGTGGATTTCGTGGACCA
ATATCCAAGGAACGATCCCTGAAGAGCTGGGTAACTTGGAGAACCTGAACTCCCTGCACTTGCACAACAACAGCCTCTCG
GGGCAGATACCCGCATCGCTCGGGAAACTCAAGTCTCTGAAACAGCTGTGAGTCC---ATGATCTCCCGATGT------T
TTCCG---TCATGTTTTTTGTTTTT------CAAGCGTCCAGTTGCTCATAGTTCCTACAG-------------------
--------------------------------------------------------AAACAAGTTTGGATCTGAACATTT
ATATATACCCTCCTAATACACGGACTGCATGGTAGGCACCTTCAACAGAACCACTTGACCGGCCCGATCCCCAGCGAGCT
GGATGGGCTGTCCGACCAGACGAGTGTGTAAGTAGGACGATTTTCTCAGC----ATTCCAGTTGTTCTCTTCTCTCTCGA
CGATCAATTAATCCAGTGATCATCATCTCGATCGTTTTCCCGTCCTGTTTCGACTGCAGGAACCTCTCAAGCAACGATCT
GTGCGGCCAGATTCCGACAGATGGTCCCTTCAAGAACATCAATTCCAGCCTCGCCGACAACCCACGGCTGGGTGGCAACT
GCTAG---------------------------------------------------------------------------
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>chr1A_1_TraesCS1A01G309100
TTATTGTATATGTTAATATTTTTGTCTATAAATTTAGTAAACTTAACAAAGCTTGACTTTGACCAAAGCTAATACGTGGA
GTAAATAAGAACGGATGGAGTAGTTATTTTAGTTAATAATACCCATAAAAACATAGATGTTCGGTACTGTAGAAAAAGAA
ATTACTATGTACTCCCTCCATTCCTAAATATATGTATTTTTTAGAGATTTTAATATGAACTACATATGGATGTATATAGA
TATACTTTAGACTGTAGATTCACTCATTTTGCTCCGCATGTAGTCCATATTGAAATATCTAAAAAGACTTATATTTACGA
ATGGATGGAGTATTTCACCAAAATATATACATGGACAGGGATATAACTCCATGAATATATACATGGACAGGAATATATAC
ATTGCTTCACAGCTTCAGATGCGTTGTAAGAT--------GCCATGTTCACATATGACTCAGACAACAGAAATATTTTGC
TATCGACTATTGTCCAAGATTTTTGAGGTTATATATGAAGCCATGCATACGGAGCAAAATGA-------------GTGCA
TGACTTCACGGAGTACACTT----CAATAACTGTCAAAAAACT--ACTATGCATATTGCATAATGGATGCGATCAAAATG
GCAACAGTTATATATGACCGGACATAT--TACTCTAACAACGATGATAAGTCCAAATTAAACCGGTGTTTCCGGAGGAAA
AGGTGGCCAACTGCCATTGTCCAAAAAGTTCACCATTTCGTAGCATTTCAAAGGTGGCCAGCTGCCA--TTGGCCAAAAC
TTATCCATTTTGGGCTGCACGTAGCATTTGATTTCCCATGCCA------CAGTGTTGACAAGGAGGCGGAGTAGGA----
----GTTCACACGCGTACTACCACCACCCCGTCGCCAGCACCTTCCTTCCCCTATAAACCCCCCGCCCCCCATCAAA---
---------CCAAAGCACAGCTCGCAAGTTCACAAGTCATAAGACCGGCCGTGCTCGTCCCACACTCCCCTCAGATCACC
TCC---------------CCGCCCCAGTCCCCATGGCGCCCAATGCGGCCGTTGCCCGAGTGCCCCTGGCGGTGACCATC
TTCGTGGCGGTCGCGACGAGCATGCTGCTGGCGCCCGCGGAGGCTGGCCTGTACAGCGACCGTGACGCGCTCTTGGCCCT
GCGGGGCGGCCTACAGGACCCTGACGGCGCGCTGCGTTCCTGGATCCTGGAGGTGAACCCCT------------GCGAGT
GGACCCAGGTCACCTGCGACCGCGTGGCCAACCGCGTCACCGAGATGTGAGTGAGGCC---ACACC---GATCCTTCTTC
CCTTCCATACTCCTTCCCTCGTATATTTCATTATTTCTGGACGCCTCGTCTTCTTCATCCCATTTTCAG--------TAC
------------------------AATCGGCCATGCGAACCTGTCCGGACCTCTGTCGCCGGAGCTGGGCAAGCTGGACC
AGCTAACCAAACTGTGAGCCTCTC------TCTCTGA--CCCATCTGTTTCTGCCCGT----------------------
---------TGATGGATCAAAATGTTTTAGCTCTTATACGTATATGGCATGTAATGAGCACAGGTGGATTTCGTGGACCA
ATATCCAAGGAACGATCCCTGAAGAGCTGGGTAACTTGGAGAACCTGAACTCCCTGCACTTGCACAACAACAGCCTCTCG
GGGCAGATACCCGCATCGCTCGGGAAACTCAAGTCTCTGAAACAGCTGTGAGTCC---ATGATCTCCCGATGT------T
TTCCG---TCATGTTTTTTGTTTTT------CAAGCGTCCAGTTGCTCATAGTTCCTACAG-------------------
--------------------------------------------------------AAACAAGTTTGGATCTGAACATTT
ATATATACCCTCCTAATACACGGACTGCATGGTAGGCACCTTCAACAGAACCACTTGACCGGCCCGATCCCCAGCGAGCT
GGATGGGCTGTCCGACCAGACGAGTGTGTAAGTAGGACGATTTTCTCAGC----ATTCCAGTTGTTCTCTTCTCTCTCGA
CGATCAATTAATCCAGTGATCATCATCTCGATCGTTTTCCCGTCCTGTTTCGACTGCAGGAACCTCTCAAGCAACGATCT
GTGCGGCCAGATTCCGACAGATGGTCCCTTCAAGAACATCAATTCCAGCCTCGCCGACAACCCACGGCTGGGTGGCAACT
GCTAGACCGATGCAAGATGCACCATGCACGGCGGCCCGCCGGAGTGAAGAATAAACTAGCAGT----ACTACTACTA---
CTAGCGTGCAGCCAGAGAATCGGGTGGCGCC--------------------------GGTTCATGCATGCACTACTTAGG
TGGATTCGTGAGGGTGGTTAATTAGCTGA-------------------------------------GCAGGCCAATTTAT
GGA--TGTTGTGTACAAACCGAGATCGATCGTTGTGGGCTTGTTTCTGGCTGTTGCCATCAATGGGATGAATTACATATA
TACT---------------------------------------------------------------TTCCCGTACCTAA
TGGAATCGCGATTAAGTTGCTGCTCTGCTCGATCGAATCTGTTCACG-----------------------GAGTTGACTG
CATTCGTTCGTTCTCTGTTCCTGTCG-----------------CGCGTTCAGTACCGCTTCAAAGCTGACCTATATGATC
ACAGGTCAAATTTAACGAATA-TTTTAGTAGTACTTCACAACAGAAAATTGAGTTATGTTTTGAGTACTTTGCTCTAGAG
TTAGACAAACAAACAAA--AAAAACTTTGAGTTAGAAAATTTTAATTACACGCCTCAACGGTGTGGATGCTACTTGGTAG
TACAGTACCCCTTTTGAG--TTTTTTTTTGAGCGGGCACTGCCTTTTGAGTTAG--------------------------
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----------------------------------------------------------CAGCCATTGTGCAATCAGACCG
TGATGAACATGTGTCTTTTAATGAATGGATGTTATTTCCCTTTAATAAGACAAAAATCCAAAAAATTAACTCTCAAAAGC
CTCACGCGCCTC-GACAATAGGCATGTCTGTTGTGCTGTGAATCAGTCGAGTCCTAAATTTTGACGTGAAAAGAGTAAGA
GCATCTTTAGCAGACCCCGTGTAATGCCGATCCACAAAATGCGTTTATAGTTCGCTGAAAAATGGATTTGCGGGTCGACA
CGGTGCTCTTTTACAGGTCAGCTACACGGGGTCTGCTCGGCCGCAGCCCACGTCGACCCGCAAATCGAAAACCCCGCATA
AGCGAATTTGACAGCGATTTCAACAATTGAGTTCAATTTTGAACAATAAATCATAGTTCGCGCGCAAATA
>chr1A_399
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------------------------------------------------------------------------------AC
ATTGCTTCACAGCTTCAGACGCGTTGTAAGATACTAAGATGCCATCTTCACATATGACTC-GACAACAGGAATATTTTGC
AATCCAATATTGTCCAAGATT-TTCAGATTATATATCAAACCATGCATA---------------TATCTATCATGGTGCA
TGACGACACAGAGTATATATAGTCTAATATCTGTCCAAAAGCT--GCTATGCATAATGCATAATGGATGTGATCAAAACG
GCAAAAGCTATATATGACCGGACATATATAATTATAGCATAGACGATAAGTCCAAGTTAAACCGGCAGTTCCAGAGCAAA
AGGTGGCCAACTGCCATTGTCCAAAAAC-TCACCATTTCGTAGCATTTCAAAGGTGGCCAGCTGCCA--TTGTCCAAAAC
CCTACCTTCTTGAGCAGCACATTGCATTTGAGTTCCCATGCCG------CAGTGTTGACAAAGAGGTGGAGTAGGA----
----GTTCACACGCG---CACCACCACCCCGTCGCCCACGCCTTCCTTCCCCTATAAAACCCCCCATCAAACCACGGCAT
GACGATCATCCAAAGCACAGCTCGAAAGTTCACAAGTCACAACACCGGCCGTGCTCGTCCCAC-----------------
TCC---------------CCGCCCCAGTCCCCATGGCGCCCAAGGCGGCCGGAGCCCGAGTGCCCCTGGCGGTGACCGTC
TTCATGGCGGTCGTGACGACCATGCTGCTGCAGCCCGCGGCGGCTGGCCTGTACGGCGACCGTGACGCGCTCATGGCCCT
GCGGAGAGGCCTACAGGACCCTGACGGTGCGCTGTATACCTGGATCCCGGAG---------GTGAGCCCCTGCAGCAACT
GGTCCCACGTCACCTGCAACGGCCAGGCCAACCGCGTCACCGAGATGTGAGTGAGGCG---ACACC---GATCCTTCTTC
CCTTCCATACTGCTTCCGTTCCGTCGTATA----------------------CTTCATCCGATTTTCAA--------TAC
GGGGTTTCTTTGTTCTGTCAGAGTAATCGGCTTTGTGAACCTGACCGGACCTCTGTCGCCGGAGCTGGGCAAGCTGGACC
AGCTAACCAAACTGTGAGCCTCTC------TCTCTAA--CCCATCTGTTTCTGCCCGTAGCG----ATTGTTCCGTT---
-GACGCGGTTGATGGATCAAAATGTACTATAAACTCT-----TATGGCATCTAATGA--ACAGGTGGATTTCGTACACCA
ATATCCAAGGAACGATCCCTGAAGAGCTGGGCAACTTGGAGAACCTGAACACCATGCACCTGCACAACAACAGCCTCTCG
GGGCAGATACCTGCATCGCTCGCGAAACTCAAGTCTCTGAAACAGCTGTGAGTCC---ATGATCTCCAGTTTTTTTTTCT
TCTTCTCTTCATGTTTTTTGTTTTTGCTTTTCAAGCATCGAATTGCCTCGTAGTACAATATTGGATTTGAAGTCTGAAGT
CTGGTAAACAAGTTTCATGATAAAACAAAAACAAAAAATTTTGAATTCTCATGATAAAACAAGTTTGGCTCTGATGTCTG
AACATTTGCATGATGATT-----------TGGCAGGCACCTTCAACAGAACCGCTTGACCGGCCCGATCCCCAGCGAGCT
GGATGGGCTGTCCGACCAGACGAGCGTGTACGTAGGACGATTTTCT------------CAGTTGTTCTCTTCTCTCTCGA
CGATCAATTAATCCAGTGATCTTCATCTCCAT-------------TGTTTTGCTTGCAGTAATCTGTCAAACAACGATCT
GTGCGGCCCGATTCCGACGGATGGTCCCTTCAAGAACATCAATTCCAGCCTCGCCGACAACCCGCGGCTGGGCAGCAACT
GCTAGGCCGATGCACGGCGTT--------GGCTGCCCGCCGGAGTGAAGAATAAACTGGGTACTCCTACTCCTACTA---
CTAGCATGCAGCCAGAGAATCGGGTGGCGCC--------------------------GGTTCATGCATGCACGACTTAGG
TGGATTCGTGAGCGAGGTTAATTTAGCTGTGTGCCAGTGCCAG----AG------------AGCAGGCAGGCTAATTTAT
GTATGTGTTGTGTACAAGCCGAGATCGATCGTTGTGGGCTTGTTTCTGGCTGTTGCCATCGATGGGATGAGTTACATATA
TGCT---------------------------------------------------------------TCCCGTGCC----
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>chr1D_399
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------------------------------------------------------------------------------AC
ATTGCTTCACAGATTCAGACGCGTTGTAAGAT--------GCCATTTGCACATATGACTCGGACAACAGAAATATTTTGC
AATCCAATATTGTTCAAGATT-TTTAGATTATATATCAAGCCATGCATACATATAAATCCTATATATCTACCATGGTGCT
TGACTTCACGGAGTACACTT----TAATAACCGTAAAAAAACTACACTACGCATACTGCATAATGGATGCGATCAAAATG
GCAAAAGCTATAG------------AT--GACTCTAACAACGACGATAAGTCCAAGTTAAACCGGCAGTTCCGGAGGAAA
AGGTGGCCAACTGCCATTGTCCAAAAAC-TCACCATTTCGTAGCATTTCAAAGGTGGCCAGCTGCCA--TTGTCCAAAAC
CTTACCTTCTTGGGCAGCACATAGCAATTCATTTCCCATGCGGTCATCCCAGTGTTGACAAGGAGGTGGAGTAGGACTGT
AGGAGTTCACACTCG---TACCACCACCCCGTCGCCCGCGCCCTCCTTCCCCTATAAAACCCCGGAGCAAACCA------
--------------------------AGATCACAAGTCACAACTCCG----TGCTCGTTCCAC--TCCCCTCAGATCACC
GCG---------------CCACCCCAGCCCCCATGGCGCCCACGGCGGCCGGAGCCCGACTGCCCCTGTCGCTGACCGTC
TTCATGGCGGTCGCGACGACCATGCTGCTGGCGCCCGCGGAGGCTGGCCTGTACGGCGACCGTGACGCGCTCATGGCCCT
GCGGAGAGGCCTACAGGACCCTGACGGCGCGCTGCGTTCCTGGAGCCCGGAGCTGGGGAACATGAACCCCTGCATCAACT
GGTCCCACGTCACCTGCGACCGCGTGGCCAACCGCGTCACCGAGATGTGAGTGAGGCG---GCACC---GATCCTTGTTC
CCCTCCATACTGCTTCCGTTCCGTCCC-------------------------CTTCATCCGATTTTCAAAATTTCAATA-
CGGTGTTTCTTGTTCTGTCAGAGTAATCGGGTTTGTGAACCTGTCCGGACCTCTGTCGCCGGAGCTGGGCAAGCTGGGCC
AGCTAACCAAACTGTGAGCCTCTC------T----AT--CCCATCTGTTTCTGCCTGTAGCG----ATTGTTCCGTT---
-GACGCCGCTGATGGATCAAA------------------GTATATGGCATGTAATGAACACAGGTGGATTTCGTACACCA
ATATCCAAGGAACAATCCCTGAAGAGCTGGGCAACTTGGAGAACCTGAACTCCATGCACCTGCACAACAACAGCCTCTCG
GGGCAGATACCCGCATCGCTCGGGAAACTCAAGTCTCTGAAACAGCTGTGAGTCC---ATGATCTCCTCCCGATA-----
---------------------TTTTTCTTTTCAAGCATGTTCGGCTCGTACAGTGATTC---------------------
---------------------------------------------TTCTCATGATAAAACAAGTCTGGCTCTGAAGTCTC
AACATTTGCATGATGATT-----------TGACAGGCACCTTCAACAGAACCGCTTGACCGGCCCGATCCCCAGCGAGCT
GGATGGGCTGTCCGACCAGACGAGTGTGTAAGTAGGACGATTTTCTCAGCGTTAATTCCAGTTGTTCTCTTCTCTCTCGA
CGATCAATGAATCCAGTGATCTTCATCTGCAT-------------TGTTTTGCTTGCAGGAATCTCTCAAGCAACGATCT
GTGCGGCCCGATTCCGACAGATGGTCCCTTCAAGAACATGAATTCCAGCCTCGCCGACAACCCGCGGCTGGGCGGCAACT
GCTAGACCGATGCACGGCGTT--------GGCGGCCCGCCGGAGTGAAGAATAAACTGGCAGC----ACTACTACTA---
CTAGCATGCAGCCAGAGAATCGGGCGGCGC-CAGTTCATGCATGTACTAGCTACTTAGGT-------------------G
TGGATTCGTGAGCGAGGTTAATTTAGCTGCGTGCCAGTGCCAGTGCCAG------------AGCAGGCAGGCTAATTTAT
GTATGT--TGTGCACAAGCCGAGATCGACCGTTGTG-----------GGCTGTTGCCATCGATGGGATGAGTTTTATATA
TATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATACTTCCGGTACCTAA
TGGAATCACGCTTAAGTTGCTGCTCGATCGAATCA---ATTTTCACCGAGTTGCTTTGCTTTGGGTGCTTGAGTTGACCG
CATTCGTTCGTTTTCTGTTCCTGTCG-----------------CGTGTCCAGTACCGC--------------------TC
ACAGGTCAAATTTGACCAATGTTTTTAGGAGTACTTCAGAACAGAAAATTTAGTTATGTTTTGAGTACTTTGCTCTAGAG
TTAGACAAACAAACAAACAAAAATCTTTGAGTTAGAAAATTTTCATCACATGACTCAACGGTGTGGATGCTACTTGGTAG
TACCCACTACA--------------TTTTGAGCGGGCACTACCTTTTGACTTAGGGCACTGATCTGCGCCGGTCGACCGG
CCGAAGCGCTCCGCCGGTCATACCAGGACCGCAGGATGACTCCATTTGTGGCCGTTAGATTAGAATCCCACGTCATCTTT
TCCCTTCCCCACCGCCTCGTCTCAGATCAGATCGAGATAGATGGGAACAACGTTGACCTTCTGTAGACAAACTGCCCCTC
GCAGGTTGCCTCGTCGGCGGCAACACACCATCTCGCCATGGCCGTCGACGCATCACCGGCGCCTTTGCGGCCGTCGCCTT
CACCACGTCCACCCTCTCGCCATCCGTTCGTGATCTACGCATCAAACCACGCCGTTGTGGCCCTTGCCGTCGCCGGTTGC
AACATATTGTACACTCGCCGTCGCAGCCCTCCTGTCCGTCTCTGGTGCAGCTTCGCCGTCCCAGCAAAAAGATGAGCAGC
CATCACCGTCCCAGCAAGAAACTCGGCCGGTCCCAGCAAAAAATCGCCGCCGGTCCCATCAAAAAACAAACTCGCCGGTC
ATAGCTTTTTCTCTGCCGCCGGTGGTGCGTAGTAGCAAATGGCAACGCCGGTTGTAGCAAAAAAACGATGCCCGTGGTGC
GTGGTAGCAAAACAAATTGCGGGTTGGACCAAAAAGCGAGCGTGGTTGTGGCAAAAAATCGACGCCGGTGATGCGTTGTA
GCAAAAATCCGGTGTGGTTGTAGCAAAACGAGATGCATATTGTAGCATCACGTACAGTACTTGTAGCAGGGAAGTGCAGG
CCGGAGCAGCGCTGCCGTCCTTGAACCGCCGATGCCGGTGGTGCGCTGTAGCAAAACGAAGTGCCGGTTGTAGCAAAAGC
TAGCATGGATGTAGCAAAAACCTCCAACGGTAGTAGCAAAAAGCCTGCTACGGTTGCAGCAAAAAAATCATTGTCGTCCT
CGCGAGGTCGTAGCTCTGCCTGATGGATGTAGCAAAAAGCTTTGCCGGTAGTAGCAAAATCCAACAACGGTTGCAGCTTT
CCCTTTTTGTGCAGTGCCATTGAAGCTTTCTATGTCTATGGTTGAAGCTTTTTTCAACGGGTGTTGAAGCTTTTCTAGGT
GACGGTTGCAACACTTGTATACGCGGGAGGATCCGGGCGTGGCTGCAGGCAGCCATGGCGGCCGGCGAGGGAGCGCTTCA
CCGGCTGCGACCCCGTAATGACGATGACGCCGTTTTGCTGCAACCGTAGTAGATTTTTGCTACCACCGGCGATTGAATTC
GCTACAACCGGTTCCAGCAAAAGTTCACCATGAGGGGTAGTCTGCCATGGCTGGTTGCAGCTCCGGCGTGGCCGGGTCCG
GCGAGGTAGGCAGAGCTCCGATGCATGCGAGGAAGGCGTCGCCGTGGTAGCACTCCGGTTGCAGCATCTCCCGTTGTCAC
CGCCCCTCGGTCACCAGCAAGATGGGATGGTCGCCGGCGAGCTTCGAGCGGGGAGGGGAGCGCGTGGCGCTGCGACCGGG
GGGCGGGGGGGAGGAGGGGGAAGGGATGGGGAAGGGGTGGGGAGGAGAGGGCAGAAGAAGAGGGCGGCGCGACGCGAGGA
AGAGGAAGAGGAAGAAGGGGATCGGGAGGAGCGCGAGGCGTATGATGCGCTGCGCGTCGCTTCGATCGAGTGGCCCGCGT
GGGACCGGCGGAACGGTTCGGCCGGTGCGCCGTTCCTAAACACTTCCCTTTGACTTAGCAGCCATTGTGA-------CTG
TGATAAACATGTGTTTTTTAATGAATGGATGCTATTTTCCCCTAGTAGGAC-AAAATCCAAAAAATTAACTCTCAAAAGC
CTCATGCGCCATGGACAACACGCATGTCTGCTGTGG-----ATCAGCTGAGTCCTAAATTTTGTTGTGAAAAGAGTAAG-
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>chr1D_400
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-------------------------------------------------------------------------------C
ATTGCTTCACAGCTTCAAACGCGTTGTAAGAT--------GCCATCTTCATATATGACTCGGACAACAAAAATATTTTCT
AATCCATTATTGTCCAAGATT-TTTATGTTATATATCAAGCCATGCATACATATAAATCCTATATATCTACCATGGTGCT
TGACTTCACGGAGTACACTT----TAATAACCGTAAAAAAACTACACTACGCATACTGCATAATGGATGCCAACAAAATG
GCAAAAGCTATATATTACCGGACATATATAATTATAACAACGACGATAAGTCCAAGTTAAACCGGCAGTTCCGGAGGAAA
AGGTGGCCAACTGCCATTGTCCAAAAAC-TCACCATTTCGTAGCATTTCAAAGGTGGCCAGCTGCCA--TTGTCCAAAAC
CCTACCTTATTGAGCAGCACATTGCATTTGATTTCCCATGCCA------CAGTGTTGACAAGGAGGTGGAGTAGGA----
----GTTCACACGCGTAC---CATCACCCCGTCGCCCGCACCTTCCTTCCCCTATAAAACCCCCCATCAAACCACGGCAT
GACGATCATCCAAAGCACAGCTCGCAAGTTCACAAGTCACAACACCGGCCGTGCTCGTCCCAC-----------------
TCCCCTCAGATCACCTCCCCAACCCAGTCCCCATGGCGCCCAATGCGGCCGTTGCCCGAGTGCCCCTGGCGGTGACCGTC
TTCATGGCGGTCACGACGAGCATGCTGCTGGCGCCCGCGGAGGCTGGCCTGTACAGCGACCGTGACGCGCTCTTGGCCCT
GCGAGGCGGCCTACAGGACCCCGACGGCGCGCTGCGTTCCTGGATCCTGGAGGTGAACCCCT------------GCGAGT
GGACCCAGGTCACCTGCGACCGCGTGGCCAACCGCGTCACCGAGATGTGAGTGAGGCCGCCACACC---GGTCCTTCTTC
CCTTCCATACTGCTTCCATCGTATATTTCAATATTTCTGGACGCCTCGTCCTCTTCATCCGATTTTCAG--------TAC
------------------------AATCGGCCATGCGAACCTGTCCGGACCTCTGTCGCCGGAGCTGGGCAAGCTGGACC
AGCTAACCAAACTGTGAGCCTCTCCCTCTCT----AA--CCCATCTGTTTCTGCCCGT----------------------
---------TGATGGATCAAAATGTATTAACTCTTA----TATATGGCATCTAATGAACACAGGTGGATTTCGTACACCA
ATATCCAAGGAACAATCCCTGAAGAGCTGGGCAACTTGGAGAACCTGAACTCCATGCACCTGCACAACAACAGCCTCTCG
GGGCAGATACCCGCATCGCTCGGGAAACTCAAGTCTCTGAAACAGCTGTGAGTCC---ACGATCTCCAGATTTGTTTTCT
TTCCG---TCATGTTTTTTTGTTTT------CAAGT--------------------------------------------
------------------------------------------------------------AAGTTTGGCTCTGAGGTCTG
AACATTTGCATGATGAAT-----------TGATAGGCACCTTCAACAGAACCGCTTGACCGGCCCGATCCCAAGCGAGCT
GGATGGGATGTCCGAACAGACGAGTGTGTAAGTTAGACGA---------------------TTGTTCTCTTCTCTGTCGA
CGATCAATTAATCCAGTGATCTTCATGTCGATCGTTTTCCCGTCCTGTTTTGCTTGCAGTAATCTATCAAGCAACGATCT
GTGCGGCCCGATTCCGACAGATGGTCCCTTCAAGAACATCAATTCCAGCCTCGCCGACAACCCACGGCTGGGCGGCAACT
GCTAGACCGATGCATGGCGTT--------GGCGGCCCGCCGGAGTGAAGAATAAACTGGCAGT----ACTACTACTA---
CTAGCATGCAGCCAGAGAATCGGGCGGCGCC--------------------------GGT--------------------
-GTATTCGTGAGTGAGTTTAATTTAGCTGCGTGCC------------AG------------AGCAGGCAGGCTAATTTAT
GTATGT--TGTGCACAAGCCGAT---------------------------------------------------------
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-------------------------------ATCGAATCTATTCACAGAGTTACGTTGCTTTGGGTGCTTGAGTTGACTG
CATTCGTTCGTTTTTCGTTCCTGTCG-----------------CGAC-----------------GCTGACATATATGATA
ACAGGGCAAATTTGACAA-------------------------------------ATGTTTTTAGTACTTTGCTCTAGAG
TTAGACAAACAAACAAA--AAAAACCTTCAAGTTAGAAATTTTAATTACATGACTCAACGGTGTGGATGCTACTTGGCAG
TACCCACTACCTCTGGAGTTTTTTTTTTTCAGCGGGCACTACCTTTTGAGTTAG--------------------------
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----------------------------------------------------------CAGACATTGTGCGATCAGGCTG
TGATGAACATGTGTTTTCTAATGAACGTATGCTATTTTCCCCTAATAAGACAAAA-------------------------
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>chr1B_481
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--------ATTGTCCAAGATT-TTTAGATTATATATCAAACCATGCATAC---------------ATCCATCATGGTGCA
TGACAACACAGTGTATATATAGTTTAGTATCTGTCCAAAAACT--ACTATGCATAATGCATAATGGATGCGATCAGAATG
GCAAAAGCTATATATGACCGGACATATATAATTATAACATAGACGATAAGTCCAAGTTAAAACGGCAGTTC--GAGGAAA
AGGTGGCCAACTGCCATTGTCCAAAAAC-TCACCATTTCGTAGCATTTCAAAGGTAACCAGCTGCCA--TTGTCCAAAAC
CTTACCTTCTTGAGCAGCACATTGCATTTGATTTCCCATGGCA------CAGTGTTGACAAGGAGGTGGAGCAGGA----
----CTTCACACGCGTAC---CACCACCCCGTCGCCCGCGCCTTCCTTCCCCTATAAAACCCCGCATCTAACCACGGCAT
GACGATCATCCAAAGCACAGCTCGCAAGTTCACAAGTCACAACACCG----TGCT------------CCCTTAGATTACC
GCG---------------CCACCCCAGCCCCCAGTC--CCCATGGCGGCCGGAGCCCGAGTGCCCCTGGCGGCGACCGTC
TTCGTGGCGGTCGCGTCGACCATGCTGCTGGCTGCCGCGGCGGCTGACCTGGACGGTGACCGTGACGCGCTCATGGCCCT
CCGGAGAGGCCTACAGGACCCTGACGGCGCGCTGCGTTCCTGGAGCCCGGAGCTGGGGAACGTGAACCCCTGCAGCAACT
GGTCCCACGTCACCTGCAACAGCCAGGCCAACCGCGTCACCGAGATGTGAGTGAGGCG---ACACC---GATCCTTCTTC
CTTTCCGTACTGCTTCTGTTCCATCGT---ATATTTCTGACCGCCTCGTCTTCTTCATCCGATTTTCAA--------TAC
GGGGTTTCTTTGTTCTGTCAGAGTAATCGGCTTTGTGAACCTGTCCGGACCTCTGTCGCCGGAGCTGGGCAAGCTGGGCC
AGCTAACCAGACTGTGAGCCTCTC------T----AA--CCCATCTGTTTCTGCCTGTGGCGATTAATTGTTCCGTC---
-GACGCCGTTGATGGATCAAAATGTATT---AACTCT-----TATGGCATCTAATGA--ACAGGTGGATTTCGTACACCA
ATATCCAAGGAACGATCCCTGAAGAACTGGGCAACTTGGAGAACCTGAACACCATGCACCTGCACACCAACAGCCTCTCG
GGGCACACCAACAGCCC-CTCGGGAAACTCAAGTCTCTGAAACAGCTGTGAGTCC---ATGATCTCCTCCCGATG-----
---------------------TTTTTCTTTTCAAGCATGTTCTGCTCGTACAGTGCATG---------------------
--------------------------------------------ATTCTCATGATAAAACAAGTTTGGCTCTGAAGTCTG
AACATTTGCATGATGATT-----------TGACAGGCACCTTCAACAGAACCGCTTGACCGGCCCGATCCCAAGCGAGCT
GGATGGGCTGTCCGACCAGACGAGCGTGTAACTAGGACGATTTTCTCAG------------TTGCTCTCTTCTCTCTCGA
CGATCAATTAATCCAGTGATCTTCATCTCCAT-------------TGTCTTGGTTGCAGTAACCTCTCAAACAACGATCT
GTGCGGCCCGATTCCGACAGATGGTCCCTTCAAGAACATCAATTCCAGCCTCGCCGACAACCCGCGGTTGGGCGGCAACT
GCTAGACCTAGGCACGGCGTT--------GGCTGCCCGCCGGAGTGAAGAATAAACTGGCA-------------------
------TGCAGCCAGAGAAGCCGGCGGCGC-CGGTTCATGCATGTACGTACTGCTTAGGT--------------------
-GGATTCGTGAGCGAGTTTAATTTAGCTGCGTGCC------------AGTGCCAGTGCCAGAGCAGGCAGGCTAATTTAC
GTATGA--TGTGTACAAGCCGAGATCGATCGTTGTGGGCTTGTTTCTGGCCGTTGCCATCGATGGGATGAGT--------
-------------------------------------------------------------------------TACCTAA
TGGAATCGCTATGAAGTTGCTGTTCTGCTCGATCGAATCCATTCACA-----------------------GAGTTGACTG
CATTCGTTTGTTCT-----------GTGCGTTCAGTACCGTTTCGAC-----------------GCTGACATATATGATC
ACAGCTCAAATTTGACGAATG-TTTT--TAGTACTTCAGAACAGAAAGTTGTGTTATGTTTTGAGTACGTTGCTCTAGAG
TTAGAAAAAAAAATC---------CTTTGAGTTAGAAAATTTTAGGTACATGACTCAACGGTGTGG--------------
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>chr1B_590
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--------------------------------------------------------TGCATAATGGATGCGATCAAAATG
GCAAAAGCTGTATATGACCGGGC--ATATGACTCTAACAACGACGGTAAGTCCAAATTAAACCGGCAGTTCCGGAGGAAA
AGGTGGCCAGCTGCCATTGTCCAAAA-GTTCACCATTTCTTAGCATTTCAAAGGTGGCCAGCTGCCACATTGTTCAAAAC
CTTACTTTCTTGAGCAGCACATTGCATTTGATTTCCCATGCCA------CAGTGTTGACAAGGAGGTGGAGCAGGA----
----CTTCACACGCGTAC---CACCACC--------------TTCTTTCCCCTATAAAACCCCGCAGCAAACCACGGCAT
GAAGATCATCCAAAGCACAGCTCGCAAGTTCACTAGTCACAACACCGGCCGGGCTCGTCCCAC-----------------
TCCCCTCAGATCAGCTCCCCACC-------CCAGTC--CCCATGGCGGCCGGAGCCCGAGTGCCCCTGGCGGTGACCGTC
TTCGTTGTGGTCGGGTCGACCATGCTGCTGGCAGCCGCGGCGGCTGACCTGGACGACGACCGTAGCGCGCTCGTGGACCA
GTGGACCCGCCTACAGGACCCTGACGGCGCGCTGGGTATCTGGAACCCGGAGCTGAGCCCCT------------GCGACT
GGCCCCACGTCACCTGCGACGGCCAGGGCAACCGCGTCACCGAGATGTGAGTGAGGCC---ACACCAACGATCCTTCTTC
CCTTCCATACTGCTTCTGTCGTATA---------TTCTGGACGCTTCGTCCTCTTCATCCGATTTTCAA--------TA-
GGGGTTTCTTTGATCTGATAGAAAAATCGGCCATGCGAACCTGTCCGGACCTCTGTCGCCGGAGCTTGGCAAGCTGGACC
AGCTAACCAAACTGTGAGCCTCTC------T----ATAACCCATCTGTTTCTGCCTCTATTG----ATTGTTACTTTCCT
TGACGAGGTTGATGGAT-----------------------TATATGGCATCTAATGAACACAGGTGGATTTCGTGGACCA
ATATCCAAGGAACGATTCCTGAAGAGCTGGGAAACTTGGAGAACCTGAATTCCATGCACTTGCACAACAATAGCCTCTCA
GGGCAGATACCCGCATCGCTCGGGAAACTCAAGTCTCTGAAACAGCTGTGAGTCCGTCATGATCTCCTCCCGATG-----
---------------------TTTTTCTTTTCAAGCATGTTCTGCTCGTACAGTGAC-----------------------
----------------------------------------------TCTCATGATAAAACAAGTCTGGCTCTGAAGTCTG
AACATTTGCATGATGATT-----------TGACAGGCACCTTCAACAGAACCGCATGACCGGCCCGATCCCCAGCGAGCT
GGATGGGCTGTCCGACCAGACGAGTGTGTAAGTTGGACGAGTTTCTCAGCGTTAATTCCAGTTGTTCTCTTCTCTCTCGA
CGATCAATTAATCCAATGATCTTCATCTCTATCGTTTTCCCATCCTATTTTGCTTGCAGTAACCTCTCAAACAACGATCT
GTGCGGCTCGATTCCGACAAATGGTCCCTTCAAGAACATCAATTCCAGCCTCGCCGACAACCCGCGGCTGGGCAGCAACT
GCTAGACCGATGCACGGCGGCCC----------GCCCGCCGGAGTGAAGAATAAACTGGCAGT----ACTACTACTACTA
CTAGCAAGCAGCCAGAGAATCGGGCGGCGCCCGGTTCATGCATGTATTA----CTTGGGT--------------------
-GGATTCGTGAGTGAGTTTAATTTAGCTGCGTGCC------------A--------------------------------
----------------------------------------------------------TCCATGGAATGAGTTACATATA
TAT--------------------------------------------------------------ACTTCCCGTACCTAA
CGGAATCGCGATTAAGTTGCTGCTCTGCTCGATCGAATATATTCACAGAGTTGCATTGCTCTGGGTGCTTGAGTTGACTG
CACTCGTTCGTTCTCTGTTCCTGTCGTGCGTTCAGAACAGCTTCGAC-----------------GCTGACATATATGATC
ACAGGTCAAATTTGACGAATG-TTTG--CAGTACTTCAGAACAGAAAATT-AGTTATGTTTTGAGTACTTTGCTCTAGAG
TTAGACAAACAAACAAA--AAAACATTTGAGTTAGAAAATTATAATTACATGCCTCAACGGTGTGGATGCTATTTGGCAG
TACAGTACCCTTTTGAGA----TTTTTTTGAGCGGGCACTACCTTTTG--------------------------------
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>SNPs
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS--
-------------------S-------------------------S--------------S-------------------
S---S-S--------------S--S-----------S-------------SS-SS--SSSS-------------------
------------------------S------------------------------S------------------------
----S--S---------------------S-------------S---------------------SSS------------
------------------------------------------------------------------------S-------
S-SS--S-S------S----S---------------------------------------------S-------------
------------------------------------S---------------------S------SS-SSSSSSSSS---
---------------------------------------S--S--------------------SS---------------
-----------------------------------------------------------------------------S--
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------S-----S------------S-----------------------------S-------------------
--------------------------------------------------------------------------------
-----------------------------------S--------------------------------------------
-------------------------S---S-------SS------------------S----------------------
-------------------------------S---------------------S--------------------------
-------------------------------------------------------------------S------------
------------------------------------S--S-S----SSSSSSS-S-----S-------------------
--------------------------------------------------------------------S------SSS-S
-SSSS-SS-S-SS-S--SSSSSSSSSSSS-----------------------S---------------------------
--------------------------------------------------------------------------------
---------------------S----------------------------S-SS--------------------------
--------S---------------------------------------------------------------S-------
--------------S-SS-SS--SSSSSS----------------------------S----------------------
-----S------------------------------------------------------------------S-------
------------S-S--------SSSSSS-------------------------------------------S-------
-S---------------S------------------------------------------S---------S---------
--------------------------------------------------------------------------------
----------------------------------------S-----S---------------------------------
---------------------------------------------S--S---------SSSSSS------S---------
-------------S------S-----------------S-----------------------------------------
--------------------------------------------------S-----------------------------
--------------S-------------------------S---------------------------------------
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----------------------------------------------------------------------S-----S-S-
--------------S----------------S-----S--SS--------------------------------------
----S-----SS------S-S---------S----SSSSSS-----SS---------------SS--------------S
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
>forward_287
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---------------------------TTTGCTCCGCATGTAGTCCA---------------------------------
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>reverse_2214
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-----------------------------------------------------CTGCAGGAACCTCTCAAGCA-------
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>forward_1890
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------------------------------TCAAGCGTCCAGTTGCTCAT------------------------------
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>reverse_4901
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--------------------GGCATGTCTGTTGTGCTGTG----------------------------------------
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----------------------------------------------------------------------
