>input_sequence_61711
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--------------ATGGCCACGAGCATAACGGCAGCGGCGGCGGCGTCGCTGCGTTCCGGCTACGTCCTCCTCGCCGCC
CTGGCCGCGCTGCTCGCCGTGGCGGCCGGTGGCGACCCGGGGAAGATCGGGGTGTGCTACGGCCGCGTGGGCGGCAACCT
CCCCGCGCCCGAGGCGGCCGCGGCGCTGCTGAGGAGTAACGGGATCACCAAGGCGCGGCTCTTCCTGCCGGACCAGGCCG
TGCTCCCCGCCTTCGCCGCGGCCGGCATCGACCTCACGGTCGGCGTGCCCAACGAGAACCTCACCTTCCTCTCCGCGGCC
GGGCCCGAGGGCGCGCTGCAGTGGCTGCGCTCCAACGGACTCGCCAGCGGCCCCGTCGCCGGCCGGCTCCGCTACCTCGC
TGTCGGCAACGAGGTGCTCTACAACAACCAGTTCTACGCGCCGCACCTGGTGCCGGCCATGCGGAACCTGCACGCCGCGC
TGGCCTCCCTCGGGCTCGACGGCGCCGTCAAGGTCTCCTCGGCGCACGCCTCGTCGGTGCTCGCGTCCTCCTACCCGCCC
TCGGCCGGCGCCTTCGACGCCGCCCAGATGGACGTGCTCCGGCCCATGCTGCGGCTCCTTGCCGACACCGGCGCCCCCTT
CATGCTCAACGCCTACCCGTTCATCAGCCACGTCGGCGACCCGGCCAACGTGCCGCTCGCCTACGCGCTCGGCGCCTCCG
ACGAGCCCGTGGTGCGCGACGGCGCGCTGGCGTACGCGGGCCTGTTCGACGCGACGGTGGACGCGGTGGTGGCGGCGCTC
GAGCGGGAGGGCTTCGGCGGGGTGCCCGTGGCGGTGACCGAGACCGGGTGGCCCACCGCGGGGCACCCGGCCGCGACGCC
GGAGAACGCCGCGGCGTACAACGGGAGGATGGCTGAGAGGGCGGCGCGGGGCGCCGGCACGCCGCGCCGGCCCGGGGCGC
CCGTGGAGGTGTTCCTGTTCGACCTCTACGACGAGGACGGCAAGACCGGCGCCGAGTTCGAGCGCCACTTCGGCATCTTC
AGGGCAGACGGCGTCAAGGCCTACAACATCAACTTTGCCTAG--------------------------------------
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>chr5A_1_TraesCS5A01G320700
CTCTGCAGACTGATACAGATCTGCATTGGATGACACAACACATCTGGATCACACAGTCAAGATGGTTATTATTTACGTGT
CGATGTTGGAGATGCCTTAACGGGGCAAATAAAGAGTGGATTATACTCCTTCCACAAAAGCTCCTGATTTACGGTCACGG
TCACCAGAATACGTCAAACAATTAAATTAGACCCAGAACGACAACTATTACTATGAAAAGATGGAATACATATATCCCAA
ACGAAAAGAGTAATTGTTGGTCAAATGCCCCAACTTCGCAAACGAAAAGAGTAATTGTTGGTCAAACGAATTCCACCGTG
ACAGAGTCACCCATAGAGATGAGCCGCGCCCGACGAGCCAAGGACTCCCAGACGGCGCCTTCAGAAAGGTAACAATGCCG
GAGCGCTGCCACCACCCGATCCAAATGATTAAGGTTTTCACTCGAAGCAAGACGAGGGACAGAGAGTCGCCGCGAATTAT
GTGATATTATGATCTAAATTAATTGGAATGATCCTACGATTACAATTAGTATAATGTGTTGATAGTTATGATACAACGAT
TTGTGATTGAACCG--------------------------------------------------------------TAGA
GGGTAACACTGCCAAGATGGCAGCTCGCTCTGCT-------------------CAATGCATCTCCTCCTCCAGCCCCACT
CACCGCCAGCAGTCTTTTGGGGTGCAATAGTGGCAGCTCCAGCAACACCTGCGGGGTGACACATGGCCAGGACAGC----
---------------GCACCAGATCATTTGATGTGCAGCTCGATCGCCATTCAAAAGCCAACGGCTATAATATGCTCTAA
CGGCTACCCGTCCG----ATCAATCGTACCGCCCC-----GGCAACCGTCAAAAGCAACTCAGATCAGATTCGCGCCAAC
GTCCCCACCCAGGTCAGGCCTGCACCAACGTAC-------------------CCTGCCATTCTTGTCAACACAAGCTCTA
TATAACCGACGA------GGGCAGAGTCCAACACTCCACAGACAAACATCACGAGATCAACACCGCCGAATCGCAACGTA
CTCACAAAGTCACAATGGCCACGAGCATAACGGCAGCGGCGGCGGCGTCGCTGCGTTCCGGCTACGTCCTCCTCGCCGCC
CTGGCCGCGCTGCTCGCCGTGGCGGCCGGTGGCGACCCGGGGAAGATCGGGGTGTGCTACGGCCGCGTGGGCGGCAACCT
CCCCGCGCCCGAGGCGGCCGCGGCGCTGCTGAGGAGTAACGGGATCACCAAGGCGCGGCTCTTCCTGCCGGACCAGGCCG
TGCTCCCCGCCTTCGCCGCGGCCGGCATCGACCTCACGGTCGGCGTGCCCAACGAGAACCTCACCTTCCTCTCCGCGGCC
GGGCCCGAGGGCGCGCTGCAGTGGCTGCGCTCCAACGGACTCGCCAGCGGCCCCGTCGCCGGCCGGCTCCGCTACCTCGC
TGTCGGCAACGAGGTGCTCTACAACAACCAGTTCTACGCGCCGCACCTGGTGCCGGCCATGCGGAACCTGCACGCCGCGC
TGGCCTCCCTCGGGCTCGACGGCGCCGTCAAGGTCTCCTCGGCGCACGCCTCGTCGGTGCTCGCGTCCTCCTACCCGCCC
TCGGCCGGCGCCTTCGACGCCGCCCAGATGGACGTGCTCCGGCCCATGCTGCGGCTCCTTGCCGACACCGGCGCCCCCTT
CATGCTCAACGCCTACCCGTTCATCAGCCACGTCGGCGACCCGGCCAACGTGCCGCTCGCCTACGCGCTCGGCGCCTCCG
ACGAGCCCGTGGTGCGCGACGGCGCGCTGGCGTACGCGGGCCTGTTCGACGCGACGGTGGACGCGGTGGTGGCGGCGCTC
GAGCGGGAGGGCTTCGGCGGGGTGCCCGTGGCGGTGACCGAGACCGGGTGGCCCACCGCGGGGCACCCGGCCGCGACGCC
GGAGAACGCCGCGGCGTACAACGGGAGGATGGCTGAGAGGGCGGCGCGGGGCGCCGGCACGCCGCGCCGGCCCGGGGCGC
CCGTGGAGGTGTTCCTGTTCGACCTCTACGACGAGGACGGCAAGACCGGCGCCGAGTTCGAGCGCCACTTCGGCATCTTC
AGGGCAGACGGCGTCAAGGCCTACAACATCAACTTTGCCTAG----AGTAGAGCTGCTTGTATGGAGATGATCGGCACGC
TGTTGATCTGTGGATCAACTGGCCGATATGCTAGCGTGAA---------------------------------------C
TGTCCATGTATCTCCCGTTATGTTAATTGCTGCGACTTGAACTTTATGATTTCATAAGCATTCTCCTGTTGATCCGGGCA
TTGCCGATAAGTAGA--GACATCATGATCTCACAAGGCTGAAGAAACTGAATCAAAGAAACTTAAACTGAATCCTCACTG
TTCATTCTGAAAAATGTTGTTCTCTCAAACTCTTTCT-----TATGTTGCAACACCCTGGCTGGCACAGCACCATCTTAG
GGAAAAAATGACACTAC-----TTTGACTAACTCCGTCTACGC-TGTCTCAACATAGCCGATCTCAAGCCCAGTAGGTAA
AGGAGCAGCGTTGTGATAAGCTTGGCGAGCCAACGTCAAAACAACCCTTCTATGAAGATGAAACCCAAGGGCAAGTGGTA
TCTTAGGACACCTTTCAATATTTTGGGCCAATGCTACGGAAGAATAGAGATATCAACAAAGATGTGAGCAATTGAATCAA
AGCTGTGTGAGCCATCGAATCAAAGCCGGATGGATGAAGTGGCACAAACCTTCTTTCATTCTCTATGACAAGAGTGCCAC
AAAAGCTAAAAGAAAGGTTTATAGAACGGTGATTCGAACCGCAATGGGGTATGCCACTAAGATGGTATGGGCATGTACAC
CGAGGCCACTGCATAGGAGAGGGCTAAAACGTGTTGATGGATCAAGGTAGACCAAACTTGACATGAGAGGAGTCCCTAAA
GAGACTAAAGAGATATCTTAAGGGCTCGTATATAACCAAAGAACTAGCCAGAACTAGCCATGGACAAGGCACGTGAATGT
TACCTATCCACATGCCAAAATCATGAGTTGGTTTCAAGATCTTAATGGAACAAGGCTATCCCAACTTATTTGGGACTAAA
GCCTTTGTTGTTGTTGTGGACACTACTTTGACCGAGGAGTATTTTCTATAGTGTGAGA
>chr5D_312
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-----------------------------------------------------------------------TCCACCGTG
ACAGAGTCAT-CATAGAGATGAGCCGCGCCCGACGAGCCGAGGACTCCCAGACGGCGCCTTCAGAAAGGTAACAACGCCG
GAGCGCTGCCACCACCCGATCCAAAGGTTCAAGGTTTTCACCCGGAGCAAGACGAGGGACAGAGGGTCACCGCGAATTAT
GTGATATTACGATCTGAATTGATTGGAATGATTCTACAATTACAATTAGTAGAATGTGCTTATCGTTATGATAAAACGAT
TCGTGATTGAACCGTATTGCCATTATAATTCCGATCCAATTCAAAATCGTGATTCGGACAACCTTGTTGCAGACCATAGA
GGGTAACACTGCCAAGACGGCAGCTCGCTCTGCTCTGCTGACACCTCGTCTGGCAATGCATCTCCTCCATCCTCG---CT
CACCGCCGGCAGTCTTGTGGGGTGCAATAGTGGCGGCTCCAGCAACATCGGCGGGGTGCCACATGGACCAACGTGTCCTC
CTCCAGGCCAGGACAGCACCAAATCGTTTGATGTGCAGCTCGATCGCCATTCAAAAGCCAACGGCTATAATATGCTCTAA
CGGCTACCCGTCCA----ATCGATCGTACCGCCCC-----GGCAACCGTCAAAAGCAACTCAGATCAGATTCGCGCCAAC
GTCCCCACC-----CAGGCCTGCACCAACGTACTACGTGAC-----CCCCCTCCTGCCATTCTTGGCAACACAAGCTCTA
TATAACCGACGA------GGGAAGAGTCCAACACTCCAAACACAAACATCACGAGATCAACACCGACGAATCGTAACGTA
CGCG------CACAATGGCCA---------------------------CGCTGCGTTTCGGCTGCGTCCTCCTCGCTGCC
CTGGCCGCGCTCCTCGCCGCGGCGGCCGGCGGCGACCCGGGGAAGATCGGGGTGTGCCACGGCCGCGTGGGCGGCAACCT
CCCCGCGCCGGAGGCGGCCGCGGCGCTGCTGAGGAGTAACGGGATCACCAAGGCGCGGCTCTTCCTCCCCGACCCGGCCG
TGCTCCCGGCCTTCGCCGCGGCCGGCATCGACCTCACGGTCGGCGTGCCCAACGAGAACCTCACCTTCCTCTCCGCGGCC
GGGCCCGAGGGCGCGCTCCAGTGGCTGCGGTCCAACGGACTCGCTGCGGGCCCCGTTGCCGGCCGGCTCCGCTACCTCGC
CGTCGGCAACGAGGTGCTCTACAACAACCAGTTCTACGCGCCGCACCTGGTGCCGGCCATGCGGAACCTGCACGCCGCAC
TGGCCTCCCTGGGGCTCGACGGCGCCGTCAAGGTCTCCTCCGCGCACGCCTCGTCAGTGCTCGCGTCCTCCTACCCGCCC
TCGGCCGGCGCGTTCGACGCCGCCCAGATGGACGTGCTCCGGCCCATGCTGCGGCTCCTGGCCGACACCGGCGCGCCATT
CATGCTCAACGCCTACCCGTTCATCAGCCACGTGGGCGACCCGGCCAACGTGCCGCTCGCCTACGCGCTCGGCGCCTCCG
ACGAGCCCGTGGTGCGCGACGGCGCGCTGGCGTACGCGGGCCTGTTCGACGCGACGGTGGACGCGGTGGTGGCGGCGCTC
GAGCGGGAGGGCTTCGGCGGCGTGCCCGTGGCGGTGACCGAGACCGGGTGGCCCACCGCGGGGCACCCGGCCGCGACGCC
GGAGAACGCGGCGGCGTACAACGGGAGGATGGCGGAGCGGGCGGCGCGGGGCGTCGGCACGCCGCGCCGGCCAGGGGCGC
CCGTGGAGGTTTTCCTGTTCGACCTCTACGACGAGGACGGCAAGACCGGCGCCGAGTTCGAGCGTCACTTCGGCATCTTC
AGGGCCGACGGCGTCAAGGCCTACAACATCAACTTTGCTTAGTACTAGTAGAGCTGCTTGTATGGAGATGATCTGCACGT
TGTTGATCTGTGGATCAACTGGCCGATATGCTAGCGTGAT---------------------------------------C
TGTCCATGTATCTCCCGTTATGTTAATTTCTACGACTTGAACTTTATGATTTCATATGCATTCTCCTGTTGATC------
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>chr5B_704
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----------------------------------------------------------------GGCCAGGACAGC----
------------ACAGCACCAGATCATTTGATGTGCAGCTCGATCGCCATTCAAAAGCCAACGGCTATAATATGCTCTAA
CGGCTACCCGTCCTATCTATCAATCGGACCGCCCCGGCAAGGCAACCGTCAAAAGCAACTCAGATTAGATTCCCGCCAAC
GTCCCCACCAAGGTCAGGTCTGCACCAACGTACAGTATGTACGTGACCCCCTCCTGCCA-------CAACACAGGCTCTA
TATAACCGACGACGACGAGGGAAGAGCCCAACACTCCACATACAAACATCACGAGATCAACACCGCCGAATCGTAACGTA
C------------AATGGCCA---------------------------CGCTGCGTTTCGGCTACGTCCTCCTCGCCACC
CTGGCCGCGCTGCTCGCCGCGGTGGCCGGCGCCGATCCGGGCAAGATCGGGGTGTGCCACGGCCGCGTGGGCGGCAACCT
GCCGGCCCCTGAGGCGGCCGCGGCGCTGCTGAGGAGTAACGGGATCACCAAGGCGCGGCTCTTCCTCCCCGACCCGGCCG
TGCTCCCGGCCTTCGCCGCGGCCGGCATCGACCTCACGGTCGGCGTGCCCAACGAGAACCTCACCTTCCTCTCCGCCGCC
GGGCCCGAGGGCGCGCTGCAGTGGCTCCGCACGAACGGCCTCGCCAGCGGCCCCGTCGCCGGCCGGCTCCGCTACCTCGC
CGTCGGCAACGAGGTGCTCTACAACAACCAGTTCTACGCGCCGCACCTGGTGCCGGCCATGCGGAACCTGCACGCCGCGC
TGGCCTCCCTGGGGCTCGACGGCGCCGTCAAGGTCTCCTCCGCGCACGCCTCGTCGGTGCTCGCGTCCTCCTACCCGCCC
TCGGCGGGCGCCTTCGACGCCGCCCAGATGGACGTGCTCCGGCCCATGCTGCGGCTCATGGCCGACACCGGCGCGCCATT
CATGCTCAACGCCTACCCGTTCATCAGCCACGTGGGCGACCCGGCCAACGTGCCGCTCGCCTACGCGCTCGGCGCCTCCG
ACGAGCCCGTGGTGCGCGACGGCGCGCTGGCGTACTCGGGCCTGTTCGACGCGACGGTGGACGCGGTGGTGGCGGCGCTC
GAGCGGGAGGGCTTCGCCGGCGTGCCGGTGGCGGTGACCGAGACCGGGTGGCCCACCGCGGGGCACCCGGCCGCGACGCC
GGAGAACGCGGCGGCGTACAACGGGAGGATGGCGGAGCGGGCGGCGCGGGGCGTGGGCACGCCGCGCCGGCCCGGGGCGC
CCGTGGAGGTGTTCCTGTTCGACCTCTACGACGAGGACGGCAAGACCGGCGCCGAGTTCGAGCGCCATTTCGGCATCTTC
AGGGCCGACGGCGCCAAGGCCTACAACATCAACTTTGCCTAGTACTAGTAGAGCTGCTTGTATGGAGATGATCGGCACGC
TGTTGATCTGTGGATCAACTGGCTGATATGCTAGCGTGATCTGTCCATGTATTTTATTTTATTTTTGACGGGGCGTGATC
TGTCCATGTATCTCCCGTTATGTTAATTGCTGCGACTTGCACTTCATGATTTCATAAGCATTCTCCTGTCGATCTGGGCA
TTGCCGATAAGTAGACAGACATCATGATCTCACAAGGCTGAAGAAACTTAC--------------ACTGAATCCTCACTG
TTCATTCTGAAAAATGTTATTCTCTCAAACTATAGTAAGGAGTATGTTGCAACACCCTGGCTGGCACAGCACCGTCTTAG
GGAAATTGTTCAGATGACACTATTTGACTAACTCCACCTATGTTTGTCTCAATATAGCCCATCCAAGC------------
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>SNPs
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS---------
---------SS----------------------------S-----------------------------------S----
-------------------------S-S-S-----------S--S-------------------S---S-----------
---------S-----S----S-----------S----S-------------S------S-S--S---------S------
-S------------------------------------------------------------------------------
-----------------S--------------------------------------------------SS-SS-SSSS--
-------S--------S-----------------S------------S-S--------S---------------------
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-------------S------------------------------------------------------------------
---------S-------------------------------------------------------S--------------
---------------------S------------------S--------------------------------S------
-S-SSSSSSS-----------SSSSSSSSSSSSSSSSSSSSSSSSSSS---------S----------------------
-------------------S---------S---------------------------S----------------------
---------S--------------------------------------------------------S--S----S-----
-------S------------------------------------------------------------------------
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S-------------------------------------------------------------------------------
----------S-----------------------------S---------------------------------------
-----------------------------------------------------------S--------------S--S--
---------------------------------S----------------------------------------------
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--------------------S-----------------------------------------------------------
---------S-----------------------S---S---------------S--------------------------
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-----S--------------------------------------------------------------------------
---------------------------------------S----------------------------------------
--------------------------------------------------------------------------S-----
------------------------------------------------S-SSSSSSSSSSSSSSS---------------
------------------S------------S-SSSS------------------------------------S------
-----SSS-SSSSS-SS------------------SS---S-S---------S------S---SS-SSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
>forward_167
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-------------------------------------------------------------------TTTACGGTCACGG
TCACCAG-------------------------------------------------------------------------
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>reverse_2280
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---------------------------------------ACTGTCCATGTATCTCCCGT---------------------
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