>input_sequence_61689
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-----------------------------------------------------------------------------A--
-----TAGTTGAAGATGAAGCTTGTCGTTGTGCTCTCGGCCCTGCTACTGCTTTCTCTCCTCGCCGTCTCCTCCGCCGAG
GAATTCGATTTCTTCTACCTTGTTCAGCAAGTGAGTAATACCACTACTA----AATCGATGATGATGATTTTACGATCTG
TAGATCCATTCTT-------------GTACAGA------------TTTCAAAGTTAGGG-TTACCTGATTCCTCCCAG-A
AAAGCGGCGAGTCTAACGACCGGCATCTTGTTTTTTGG--------ACGTACGTACTGTACTTTCTAGTGGCCTGGGTCC
TTCTGTGACACGAAGAAGGGGTGCTGCTTCCCGGACACCGGCAAGCCGGCGACGGACTTCGGCATCCACGGGCTGTGGCC
CAACTACGCCAAGTGCAAGACCCGCGGCGAGCTCGACGGCGCCCTGGAGATGGTGACCAAGCGCAAGAAGAAGTGCTGGC
CGGAGAACTGCAACAGCGAGCGCCTCAAGCTCTGGGAGATCAAGGACCTGGTGACGGAGCTGGACGCCAACTGGCCGACG
CTGGCGTGCAAGGGCGGCAAGAGCATCGAGTTCTGGACCCACGAGTGGGAGAAGCACGGCACCTGCTCCAACCTGGACCA
GCACGGCTACTTCGCGACGGCGCTCGGCTTCAAGGCCCGCCACAACCTCACCGGCATCCTCGCCGACGCCGGGATCGTGC
CGTCGGACAGCGAGACCTACTTCCTCAGCAGCATCAGGGACGCCATCAAGGAGGGGACCGGGTTCACGGCGAACCTCGAG
TGCAACCGCGGCGTCGCCGGCGAGACGCAGCTGTTCCAGGTGTACCAGTGCATCGACAGCGCCGGGGAGAACCTCATCGA
CTGCCCGCTGCCGATGCAGGGCAACTGCAAAGACAGGGTCCAGCTGCCGGCCTTCTGATTAAA--TTTTGAATTCTGATT
GAACACCCGTTGCCGGCTTGCCGCCGTCCGTCGGGGTGTGGTGCGGCGGCTGATTGGCTCGACGCGGCCCGGCCGGCCGC
CTGCACAGTGCGCGGGTGGATTACGTGATGGATGTACCTTTGTGTTTGCTATTGGTTCAGTTAAAATGCCGTC-------
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>chr2A_1_TraesCS2A01G157400
CAATGCACCGGCGAGTCACGCGCGCTGCATTTTTGCGCGCTGCTGGAGCGACGCGCACGCTGCATTTCAGCGCGGCTGCT
GGAGCAGGCGCTGCGCGCCGCGCCAAACCAAACGATGCGCATGCAGCAAATCTGTTTTTTGCGCGCCGCGCGTCCGGCGC
CTGTTGAAGATGCTCTTAACTCTTACTGTAACCTTCAGTGCGGCATCAGCGATGCATCGAAATTCAGAAGCTGATGTTGA
TCAAGCCAGCTATTGTCCCACCCGCCCCACGCGCTGTTTGACC--AAACATTCAAAGAAGTCCTTGGTTGGAACTAAGTG
CACGCCAATAATTGGCCTTCCCCACCCTATTTCACACATAAAGCATATATTAGAAAGAAAGAAAAACGAACACAAAAAAA
AATGCCCATTGCTCCATTGAAACCTCGTCCTCCTGACTCACATTGATAATTTCTTTCTTTCCATCTAATAATGTCAGTTG
CACCTGAAAAACCAACATATTCTACAGCATTATTGGTCCTTATCAGATTCATTACT--------------CCTTGCGTGG
GGAAGGAAGCGACCCATCAACCACTATGATGAAATT--------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------TCCGACGATTTTCATTTTTCAATCATAACAA
ATTTCCAACGATTCCTCCGAAAAAGAAGTCTGATGTTTTTTTTCTCCTAATCTAAACGATTGGATCAGGATGAGGAATCT
ATCTACACTTGCCTCTCCTACCTGGACTCCGATGTCATCTACGCCATGTTGCTTGCTTGCACGTTGTTTCCTCGAAACTG
AGCCTGATCAACCAGCGGCATATTCCAACCGATCGATGCGTATTCCGTCCGAATATCTCATCTTATTATTAGTACC---A
TATATATTTTTTTCCGAGGAATTAGTACCATATATTGTACTATAAACTTGTCGCGTGTTACATGAAGTTGTTACATTACG
TCCCTAAAAAAAAAACTTGTTACCTTACGTCGTCCTATAAGTAGCTGCGCGATAGCTGCGGCTACACATCTC-----A--
-----TAGTTGAAGATGAAGCTTGTCGTTGTGCTCTCGGCCCTGCTACTGCTTTCTCTCCTCGCCGTCTCCTCCGCCGAG
GAATTCGATTTCTTCTACCTTGTTCAGCAAGTGAGTAATACCACTACTA----AATCGATGATGATGATTTTACGATCTG
TAGATCCATTCTT-------------GTACAGA------------TTTCAAAGTTAGGG-TTACCTGATTCCTCCCAG-A
AAAGCGGCGAGTCTAACGACCGGCATCTTGTTTTTTGG--------ACGTACGTACTGTACTTTCTAGTGGCCTGGGTCC
TTCTGTGACACGAAGAAGGGGTGCTGCTTCCCGGACACCGGCAAGCCGGCGACGGACTTCGGCATCCACGGGCTGTGGCC
CAACTACGCCAAGTGCAAGACCCGCGGCGAGCTCGACGGCGCCCTGGAGATGGTGACCAAGCGCAAGAAGAAGTGCTGGC
CGGAGAACTGCAACAGCGAGCGCCTCAAGCTCTGGGAGATCAAGGACCTGGTGACGGAGCTGGACGCCAACTGGCCGACG
CTGGCGTGCAAGGGCGGCAAGAGCATCGAGTTCTGGACCCACGAGTGGGAGAAGCACGGCACCTGCTCCAACCTGGACCA
GCACGGCTACTTCGCGACGGCGCTCGGCTTCAAGGCCCGCCACAACCTCACCGGCATCCTCGCCGACGCCGGGATCGTGC
CGTCGGACAGCGAGACCTACTTCCTCAGCAGCATCAGGGACGCCATCAAGGAGGGGACCGGGTTCACGGCGAACCTCGAG
TGCAACCGCGGCGTCGCCGGCGAGACGCAGCTGTTCCAGGTGTACCAGTGCATCGACAGCGCCGGGGAGAACCTCATCGA
CTGCCCGCTGCCGATGCAGGGCAACTGCAAAGACAGGGTCCAGCTGCCGGCCTTCTGATTAAA--TTTTGAATTCTGATT
GAACACCCGTTGCCGGCTTGCCGCCGTCCGTCGGGGTGTGGTGCGGCGGCTGATTGGCTCGACGCGGCCCGGCCGGCCGC
CTGCACAGTGCGCGGGTGGATTACGTGATGGATGTACCTTTGTGTTTGCTATTGGTTCAGTTAAAATGCCGTCACAGTCC
CGAGTTCTGGGCATCGACGTAACGTTTACTATTAATTCCTGATCTGATCA---GGCGAATAAAGACTTTTAATCTTGCCT
TTTGATTTTGCTCCACAAATTCTGAACAAAGCCAAAAGATGAAACAAAGTATGTCGCGGCACTTTGAGTTGCGATATTTT
GTTGTTTCGATGAGATGACCTTGANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNAGCATCTATAGTTGGATTTAATAAATCTCCCCTCCCCCTAACATTTATAGGACGTGTCCCC--------
--------------------------------------------------------------------------------
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-----------------------------------------------GGATAATGTCGGACGACCCCTCATAAGTGCTCA
ACCTTGCAGTGCGGTGCCACCTCACACCAACTGCTCTTCATGGCCGGCCTATGGATGTAACGGCAAGTGTCTTCGTTATC
GACGGCATCTTACATGCGCATGGTAACTGGATGCCATGACTAGTCCTGTAGTTGATCTCGAAATAGACTTTCGCCCCGCT
TTATAAACTAGATGATGCCCCGCGCGTTGCTACGGGACATTGGTGCGGGATACCATTATTTTTTCCTAAGCATATTAGCA
TGAAACATGTCAGATGAAAGGCGAATTAACAACTGGTAGTTGCTAGTAATTGAAATATAACAACAAACCCTTAGTGTTTT
CATGTCTGGCAAACATGGGGAACTATCTTCGTATCAATATATCATCAGATATAACTATATAAAACAAATAGACATATGAA
GTTTATGCTAG
>chr2B_174
TCTTA---------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------CTCTTGCTGTAACTTTCAGTGCGGCATCACCGATGCATTGAAATTCAGAAGCTGCAGTTGA
TCCGGCCAGCTCTTGTCCCACCTGCCCCACGCGCTGTTTGACCTTAAACATTCAAAAAAGTCCTTGGTTGGAACTAAGTG
CACGCCAATAATTGGTCTTCCCCGACCTATTTCACACATAAAGCATATATTAGAAAGAAAGAAAAACGAACATAAAAAAA
ATGCGCAC-TGCTCCATTGAAACCTCGTCCTCCTGACTCACATTGATAATTTCTTTCTTTCCATCTAATAATGTCAGTTG
CACCTAAAAAGC---CATAATCGACAGCATTATTATTAGC--TCAGGTTCATTACTCCTTGCACCAGCTGCCTTGCGTGG
GGACGGAAGCGACCCATCAACCAGTACGATGAAATTGCGAATCAACGTGTGGTTGAGTTGGTTAGGTGGACAGTGGTATC
CCCAACCCATCAGGGTTCAAATCCTGTTGCTCGCATTATTCTTGAATTTATTTCAGAATTTCCGGTGATGCGCTTTCAGT
GGGAGGAGACGTTTCCGTCGACGACGAGGCGCCTAGGGTGACTTCGTAAATCTCAAGATGATATGCCGGCTCAATCTTTT
GGAGGTGCTCATAGGGGTACTCATAGAGGTAGGGTGTGCGTGTGTGCGTTCATAGGGATGAGTGTATGCGCGTGTACATG
AGCGCTTGTGTCTATACTGATGCTAAAAAAAAACCACTACGATGAAATTTCCGACGATTTTCATTTTTCAATCATAACAA
ATTTCCAACAATTCCTCCGAAAAAGAAGTCTGATGTTTTTTTCCTCTTCATCTGAACGATTGGATCAGGATCAGGAATCT
ATCTACACTTGTCTCTCCTACCTGGACTCCTATGGCATCTACGCCATGTTGCTTGCTTGCACGTTGTTTCCTCGAAACTG
AGCCCGATCAACCGACGGCATATTCCAACCGATCGATGCGTATTCCGTCCGAATATCTCATCTTATTATTAGTATACCAA
TATATAATACGATTG-------------------------TATAATCTTGTCGCGTGTTTCATGAAGTTGTTACATAACG
TC--------------------------GTCGTGCTATAAGTAGCTGCGCGATAGCTGCGGCTACACATCTC-----AAA
GTTAATATGCGAAGATGAAGC---TCGTTGTGCTGTCAGCCCTGCTCCTGCTTTCTCTCGTCGCCGTCTCCTCCGCCGAG
GAATTCGATTTCTTCTACCTTGTTCAGCAAGTGAGTAACACTACTACCA----AATCGA---TGATGATTTTACGATCTG
TAGATCTATTCTT-------------GTACAGA------------TTGCAAAGTTAGGG-TTACCTGATTCCTCCCAG-A
AAAGCGGCGAGTCTAACGATCGGCATCTTGTTTTTCGG--------ACGTACG-----TACTTTCTAGTGGCCAGGGTCC
TTCTGTGACACGAAGAAGGGGTGCTGCTTCCCGGACACCGGCAAGCCGGCGACGGACTTCGGCATCCACGGGCTGTGGCC
CAACTACGCCAAGTGCAAGACCCGCGGCGAGCTCGACGGCGCCCTGGAGATGGTGACCAAGCGCAAGAAGAAGTGCTGGC
CGGAGAACTGCAACAGCGAGCCCCTCAAGCTCTGGGAGATCAAGGACCTGGTGACGGAGCTGGACGCCAACTGGCCGACG
CTGGCGTGCAAGAGCGGGAAGAGCATCGAGTTCTGGACCCACGAGTGGGAGAAGCACGGCACCTGCTCCAACCTGGACCA
GCACGGCTACTTCAAGACGGCGCTCGGCTTCAAGGCCCACCACAACCTCACCGGCATCCTCGCCGACGCCGGGATCGTGC
CGTCGGACAGCGAGACCTACTTCCTCAGCAGCATCAGGGACGCCATCAAGGAGGGGACCGGGTTCACGGCGAACCTGGAG
TGCAACCGGGGCGTCGCCGGCGAGACGCAGCTGTTCCAGGTGTACCAGTGCATCGACCGCGCCGGGAAGAACCTCATCGA
CTGTCCGCTGCCGATGCAGGGCAACTGCAAAGACAGGGTCCAGCTGCCGGCCTTCTGATTAAA--TTT-GAGTTCTAATT
GAACACCCGTTGCCGG--------CGTCCGTCGGGGTGTTGTGCGGCGGCTCATTGGCTCGACGCGCCCCGGCCGGCCGC
CTGCACGGTGCGCGGCTGGATTACGTGATGGATGTACCTTTGTGTTTGTTATTGGTTCAGTTAAAATGCCGTCACAGTCC
GGAGTTCTGGGCATCGACGTAACGTTTACTATTAATTCCTGATCTGATCATCAGGCCAATAAAGAC-TTTAATCTTGCCT
TTTGATTTTGCTCCACATATTCTGAACGAAGTCAAAAGATGAAACACAGTATGTCACGGCACTTTGAGTTGGGATATTTT
GTTGTTTTGATGAGATGACCTTGCAGTTGGGATTGGTGCGTGTCTTCTTCGTTGGTTGGGGTAAG---------------
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-----------AGCATCTATAGCCGGATTTTAGTAAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCGCGTCTCGGGATAATGTTGGACGGCTCCTCATAAGTGCTCA
ACCTTGGAGTGTGGTGCCACCTCACACCAGCTGCTCCTCATGT-CGGCATACGGATGTAACGACAAGTGTCTCCGTTATC
GACGGCATCTTACATGCGCATGGTAACTGAATGCCATGACTAGTCCTGTAGTTGAT------------------------
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>chr2D_176
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---------------TTAACTCTTGCAGTAACTTTCAGTGCGGCATCACCGATGCATTGAAATTCAGAAGCTACGGTTGA
TCCGGCCAGCTCTTGTCCCACCAGCCACACGCGGTG-TTGACCTTAAACATTCAAAAAAGTCCTTGGTTGGAACTAAGTG
CATGCCAATAATTGGCCTTCCCCAACCTATTTCACACATAAAGCATATATTAGAAAGAAAGAAAAACGAACATAAAAAAA
TGCCCACG--GCTCCATTGAAACCTCGTCCTCCTGACTCACATTGATAATCTCTTTCTTTCCATCTAATAATGCCAGTTG
CACCTAAAAACC---CATAATCGACAGCATTATTATTAGC--TCAGGTTCATTACTCCTTGCACCAGCTGCCTTGCGTGG
GGAAGGAAGCGACCCATCAACCACTATGTTGAAATT--------------------------------------------
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-------------------------------------------------TCTGACGATTTTCCATG-------ATAACAA
ATTTCCAACGATTACTCCGAAAACGAAGTCTGAT-TTTTTTTTCTCCTAATCTGAACGATTGGATCAGGATCAGGAATCT
ATCTACACTTGTCTCTCCTACCTGGACTCCGATGGCATCTACGCCATGTTGCTTGCTTGCACGTTGTTTCCTCGAAACTG
AGCCCGATCAACCAACGGCATATTCCAACCGATCGATGCGTATTCCGCCCGAATATCT-ATCTTATTATTAGTACC---A
TATATAATACT------------------------------------TTGTCGCGTGTTGCATGAAGTTGTTACATTACG
CCCCTAA---AAAAAGTTGTTACATTACGTCGTCCTATAAGTAGCTGCGCGATAGCTGCGGCTACACATCTC-----A--
-----TAGTTGAAGATGAAGCTTGTCGTTGTGCTCTCGGCCCTGCTCCTGCTTTCTCTCGTCGCCGTCTCATCCGCCGAG
GAATTCGATTTCTTCTACCTTGTTCAGCAAGTGAGTAATACCACTACCA----AATCGA---TGATGGTTTTACGATCTG
TAGATCTATTCTT-------------GTACAGA------------TTGCAAAGTTAGGG-TTACCTGATTCCTCCCAG-A
AAAGCGGTGAGTCTAACGATCGGCATCTTGTTTTTTGG--------GCGTACT-----TACTTTCTAGTGGCCAGGGTCC
TTCTGTGACACGAAGAAGGGGTGCTGCTTCCCGGACACCGGCAAGCCGGCGACGGACTTCGGCATCCACGGGCTATGGCC
CAACTACGCCAAGTGCAAGACCCGCGGCGAGCTCGACGGCGCCCTGGAGATGGTGACCAAGCGCAAGAAGAAGTGCTGGC
CGGAGAACTGCAACAGCGAGCGCCTCAAGCTCTGGGAGATCAAGGACCTGGTGACGGAGCTGGACGCCAACTGGCCGACG
CTAGCGTGCAAGGGCGGCAAGAGCATCGAGTTCTGGACCCACGAGTGGGAGAAGCACGGCACCTGCTCCAACCTGGACCA
GCACGGCTACTTCGCGACGGCGCTCGGCTTCAAGGCCCGCCACAACCTCACCGGCATCCTCGCCGACGCCGGGATCGTGC
CGTCGGACAGTGAGACCTACTTCCTCAGCAGCATCAGGGACGCCATCAAGCAGGGGACCGGGTTCACGGCGAACCTGGAG
TGCAACCGCGGCGTCGCCGGCGAGACGCAGCTGTTCCAGGTGTACCAGTGCATCGACCGCGCCGGGGAGAACCTCATCGA
CTGCCCGCTGCCGATGCAGGGCAACTGCAAAGACAGGGTCCAGCTGCCGGCCTTCTGATTAAAATTTT-GAATTCTGATT
GAACACCCGTTGCCGACTTGCCGCCGTCCGTCGGGGTGTGGTGCGGCGGCCGATTGGCTCGACGCGTCCCGGCCGGCCGC
CTGCACGGCGCGCGCGTGGATTACGTGATGGATGTACCTTTGTGTTTGTTATTGGTTCAGTTAAAATGCCGTCACAGTCC
CGAGTTCTGGGCATCGACGTAACGTTTACTATTAATTCCTGATCTGATCA---GGCGAATAAAGACTTTTAATCTTGCCT
TTTCATTTTGCTCCACAAATTCTAAACAAAGTCAAAAGATGAAACACAGTATGTCACGGCACTTTGAGTTGGGATATTTT
GTTGTTTTGATGAGATGACCTTGCGTTGCGATTAA---------------------------------------------
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------------------------------------------------GATAATGCCGGATTGTG----ATAAGTGCTCA
ACCTTGCAGTGCGGTGCCACCTCACACTAGCTGCTCTTCATGGCCGGCCTACGGATGTAACGACAAGTGTCTTCGTTATC
GACGACATCTTACATGTGCATGGTAAATGGATGCCACGACTAGTCCTGTAGTTGAT------------------------
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>chr2D_945
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----------------TTGTTACATTACGTCGTGCTATAAGTAGCTGCGCGCTGGCTGCAACTACACATCAAAGTTGA--
-----TAGGCGAAGATGAAGCTTGTGGTTGTGCTCTCGGCTCTGCTCCTGCTTTCCCTCGCGGCCGTCTCCTCGGCGGAA
GAATTCGATTTCTTCTACCTTGTTCAGCAAGTGAGTAGCAATAG-----TACTGATCGA---TGATCAATTTCCAATCTG
TAGATCACATCTTTGTACAGATGTCAGTATGCA------------TTGCAATGTTAAAC-TTGTCTGATTCCTTCCAATC
TAACGAT----------GATCGTCGTCTTGTTTTTCTTTTGGACGAACGTATT-----GTGTTCCTAGTGGCCTGGGTCG
TTCTGTGACACGAAGACAGGGTGCTGCTTCCCGGACACCGGCAAGCCGGCGACGGACTTCAGCATCCACGGGATGTGGCC
CAACTACGCCAAGTGCAAGACCCAAGGCGAGCTCGACGGCGTCATCGAGATGGTGACCAAGGGGAAGAAGAAGTGCTGGC
CGGAGTTCTGCAACAGCGAGCCCCTGCAGCTGTGGGAGATCAAGGACCTGGTGAAGGAGCTGGACGCCAACTGGCCGACG
CTGGCGTGCAAGGGCGGGAAGAGCATCGAGTTCTGGAGCCACGAGTGGGAGAAGCACGGCACCTGCTCCGACCTGGGCCA
GCACGGCTACTTCGCGGCTGCGCTCGGGCTCAAGGCCCGTCACAACCTCACCGCCGTCCTCGCCGACACCGGGATCGTGC
CGTCGGACAGCGAGACTTACTCCCTGAGTAGCATCAATGACGCCATCAAGGAAGGCACCGGATTCGCGGCGAAACTGGAG
TGCAACCGGGGCGTCGCCGGCGAGGTGCAGCTGTACCAGGTGTACCAGTGCGTCGACCGCTCAGGGGAGAACCTCATCGA
CTGCCCGGTGCCGGTGCAGGGCAACTGCAAAAACAGGGTCCAGCTGCCGGCCTTCTGATTAAG---TT-GAATTCT----
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>chr2A_1023
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--------------------------GTTGCGCTCTCGGCTCTGCTCCTGCTTTCTCTCGCGGCTGTCTCCTCGGCGGAA
TAATTCGATTTCTTCTACCTTGTTCAGCAAGTGAGTATCAATAATGCTATACTAATCGA---TGAGCAATTTCCAATCTG
TAGATTGCATCTT-------------GTTCAGATGTTGGTATGCGTTGCAATGTTAAAATTTGTGCGATTCCTTCCAAAA
AAAGCGATGAATCTAACGATGGTCATCTTGTTTTT-----GGACGTGCGAAAT-----TTGTTTCAAGTGGCCGGGGTCG
TTCTGTGACACGAAGAAGGGGTGCTGCTTCCCGGATGCTGGCAAGCCGGCGACGGACTTCAGCATCCACGGGCTCTGGCC
CAACTACGCCAAGTGCAAGACCCAAGGCGAGCTCAACGGCGTCATCGAGATGGTGACCAAGGGGAAGAAGAAGTGCTGGC
CGGAGTTCTGCAACAGCGAGCCCCTGCAGCTGTGGGAGATCAAGGACCTGGTGAAGGAGCTGGACGCCAACTGGCCGACG
TTGGCGTGCAAGGGCGGGAAGAGCATCGAGTTCTGGACCCACGAGTGGGAGAAGCACGGCACCTGCTCCGGCCTGGGCCA
GCACGGCTACTTCACGGCGGCGCTCGGGCTCAAGGCCCGTCACAACCTCACCACCATCCTCGCCGAAGCTGGGATCGTGC
CGTCGGACGACAAGACTTACTTCCTGAGTAGCATCAGTGACACCATCAAGGAAGGCAC----------------------
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-----------
>SNPs
SSS-SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSS---------S-------S---------------S--------S---------------SS-----
--SS-------S----------S---------------------------------S-----------------------
------------------------S-----------------------------------------------S-------
-SSS---SS-----------------------------------------------------------------------
-----S----S-SSS----S--S-----------SS-SSSSS----S---------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
-----------------------------------------------------S-----------------S--------
-----------S----------------------S---------------------------------------------
----S---------S-----------------------------------------------------------------
------S-SS-S-SSSSSSSSSSSSSSSSSSSSSSSSSSS-----S-------------S--------------------
-------SSS-----S-------S--------------------------------------------------------
----------------------------------------------S------------S--------------------
-----------------------------------------------------------SSS------------------
------S----------------------------------------S--------------------------------
-------------------S---------------------------------SSSSS----------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------------------------------S---
---------------------------------------------------------S----------------------
--------------------------------------------------------------------S-----------
------------------------------------------------------------------S-------------
------S-----------------------------------------S-------------------------------
--------------------------------------------------------------------------------
-------------------------------S--------------S--------S---------------S--------
-------S---------------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSS-----------SS------S-SS--SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS--------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------S-S---------------
-----------------------------S---------------------S----------S-----------------
--------------------------------------------------------SSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSS
>forward_122
--------------------------------------------------------------------------------
----------------------CCAAACCAAACGATGCGCAT--------------------------------------
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>reverse_1407
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----------------------------------------------ACTGCTTTCTCTCCTCGCC---------------
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>forward_1075
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---------------TCCTACCTGGACTCCGATGT---------------------------------------------
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>reverse_3027
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------------------------------------------------------------------GTCCCCGGATAATG
TCGGAC--------------------------------------------------------------------------
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-----------
