>input_sequence_61672
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------------GTATATATAGGGGGCATGTTTTAATCTCAACCATTAATCCATATC-AAAAAAAGTTAATGTTTCCACG
TGTGGT------GAAGCATACCTAAACTATTTCATACTCCCTCCATTTCATAATATTTTAAGTTTTACATTTATCTTAAA
TCAAACATCTTTAAGTTTGACCAAATCTATAATAAATATATCAACATATACAACATCAACCGTATATAGCATGAAAATAT
ACTTCATGATGAATTTTTATAGTTATACTTTATGATAAATCTAATGAGACTAGTTTGATGTTGCCGATGAATTATCCATA
GGCATAATCAAATTTGAAGACCTTTAACTTAG------------------------------------------------
--------------------------------------------------------------------------------
-------------AATAAGCCTAAAATTCGGGTATTTTGGAACATAGTGTATTTTCTAATAGTTAAATAATAATTAAATG
CCCTGTATTTTTTTTAGGGTAAAAAATGCGCTATAATTTAAAA-------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------------------------------ACCA
TTTCTCCTTTCGTTTCTCGCAGATATGGATTACGGGACCGAGCAAAGTTTAAAACGCACCGCATGCATGACGCATACGAA
CAGAAGGTCCCATGCTAATAGGCGTTCCAATGGCTTCAACATTAGGAATTGTGGATCCACGCCATTTGCCTACACTTAAG
CAGAACCGCAAGAACACGAGACGTTCTCCTGAACCCACTCCCCACCACCCCTCTCTCGCTCTCCTC--CCACTATAAATC
CTCAAGAACACCGCCTCCTTCCTCCACCCACCACCAGAGCTCGCGAATAATCCACCGCAATAAGCACATAAACCCACCTC
CAT----CC----GCGCAATCTCTCAATCTTGCAAAGGCATCAATGGCGGGCGCAAGGAACAACGAGCTGCGCATGACCC
TGCTCGGCCTGGCCCTGCTGGGGCTCCTGCTGGTGAGCCACACCGCGGCTCCGGTGGATGCTGCCGCGGGCGTGCAGGAG
AACAGCTTCTCCATGAACGGCGCCGGCGGCCGCAGTCTCAACAGCTTCAGCATGAACACCGCCGAG---GGCGAGGGCGC
CAAGGGGGGGAAAGCCAAACCCGCCGCCGGCGACTTCTGATCGACGACCCTCCGTCCGCCGGCGTCGAGTACTAA-----
--------------------------------------------------------------------------------
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--------------------------
>chr3B_1_TraesCS3B01G461700
CGCGCCCTAGGTAGGGGGGGCGCCCTCCATCATTGTGGTGGCCTCGGGACTCTTCTGGCCCAACTCTTTTGCTTCAGGGG
CTTCTTCTGGTCCATAAAAAATCACCATAAATTTTCAGGTCATTTGGACTCCGTTTGGTATTCCTTTTCTGTAAAACTCA
AAAACAAAGAAAAACAGAAAATGGCATTGGGCTCTAGGTTAATAGGTTAATCCCAAAAATAATATAAAATAGCATATAAA
ACATCCAAGATGGATAATATAATAGCATGGAATACTAAAAAATTATAGATACGTCAGAGACGTATCAAATGTCGGCCCGC
TCGTGAATGAACGTGTGGCAGGAGTAGGTTTCTAAGCTTCCACACGTGTTTGAATGCGGAGAGGAGGCGTGTTCTGCCGG
GCATGCAGCGGGTGGCGGCCTCGGCCGGCGCACCGCTTCAATGCCGGAGGCGGTGAGAGATCGCGTTTGCATTGAACCGT
TTTCAACATGGAGCGGCCGCTCTAC-GCGGCAGCAATGCTGGCAGCTTGCGCTGG-GAGAGAACATGCGCGGGTGAAGGA
GGAGGGGTTTTTGGGTGGGCCAGTGTGGTTAGACGCGGGCGTGGGTGCTGTCCGGATGCCCACAAGGTCCCCA-CCCCAT
GTTTGTCTTCGGTTTGCGGGAGAAATTACGTCCGGCCGCTCTGCGGACGGATACATGCCCGCATTGAATGGTGCAATACA
TCCGGACAGTGTGCTCCAGACGTATGCAGACAGTTTGAGGGTCGGCATTGGAGATGCCCTTAGAAAATGTTAATCAAACA
TTTAAAAATATTCAAATGTGTACATAAAAAATGTTAACTGAATATTAAAAAAATGTTAATCTTATACTTTAAAATTATTA
ATTGTGTATTAGAAAAATACATTAGATATATACCAAAAATGTGTATGAAAAGATAGTGAAAACCAAGAAAATA-C--AAA
AGCCAATAAA-AACTAGAAAGAACATTTAGAAACAG--------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-GCCCAGGCAACGTATATATAGGGGGCATGTTTTAATCTCAACCATTAATCCATATC-AAAAAAAGTTAATGTTTCCACG
TGTGGT------GAAGCATACCTAAACTATTTCATACTCCCTCCATTTCATAATATTTTAAGTTTTACATTTATCTTAAA
TCAAACATCTTTAAGTTTGACCAAATCTATAATAAATATATCAACATATACAACATCAACCGTATATAGCATGAAAATAT
ACTTCATGATGAATTTTTATAGTTATACTTTATGATAAATCTAATGAGACTAGTTTGATGTTGCCGATGAATTATCCATA
GGCATAATCAAATTTGAAGACCTTTAACTTAG------------------------------------------------
--------------------------------------------------------------------------------
-------------AATAAGCCTAAAATTCGGGTATTTTGGAACATAGTGTATTTTCTAATAGTTAAATAATAATTAAATG
CCCTGTATTTTTTTTAGGGTAAAAAATGCGCTATAATTTAAAA-------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------------------------------ACCA
TTTCTCCTTTCGTTTCTCGCAGATATGGATTACGGGACCGAGCAAAGTTTAAAACGCACCGCATGCATGACGCATACGAA
CAGAAGGTCCCATGCTAATAGGCGTTCCAATGGCTTCAACATTAGGAATTGTGGATCCACGCCATTTGCCTACACTTAAG
CAGAACCGCAAGAACACGAGACGTTCTCCTGAACCCACTCCCCACCACCCCTCTCTCGCTCTCCTC--CCACTATAAATC
CTCAAGAACACCGCCTCCTTCCTCCACCCACCACCAGAGCTCGCGAATAATCCACCGCAATAAGCACATAAACCCACCTC
CAT----CC----GCGCAATCTCTCAATCTTGCAAAGGCATCAATGGCGGGCGCAAGGAACAACGAGCTGCGCATGACCC
TGCTCGGCCTGGCCCTGCTGGGGCTCCTGCTGGTGAGCCACACCGCGGCTCCGGTGGATGCTGCCGCGGGCGTGCAGGAG
AACAGCTTCTCCATGAACGGCGCCGGCGGCCGCAGTCTCAACAGCTTCAGCATGAACACCGCCGAG---GGCGAGGGCGC
CAAGGGGGGGAAAGCCAAACCCGCCGCCGGCGACTTCTGATCGACGACCCTCCGTCCGCCGGCGTCGAGTACTAA-----
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------TTAAATAATTTATCCTCCGGTTACCCCGGGCTTG--CATGCATGCATGCACG
CATGGCTCGTGCGGTGGGCGCGCAGGATCGATCG-ATCGGCCGGCCGCCCGGAGCTCCTGCATGCACGCGCGCG----AA
TGCTGCCTCGATCGTTTGATTAGGTATCGTGATTTTTGTTCTTGTGTGTAATTTGGATGTGCAGATGCAGTGCGTGTGCT
GCACCCATCCGTTGTGTTCTTCAGTGTAAGGGCCGTCTGTTCGTTTGTACGTGGCCTCACTGATCATTATGAAAATTATT
AT---ATTA------TTTCTTAAACCAATGGACCGTAGGTGGTCATTAGAGAT-----------ACGGAATCGAACACGA
TAAAGAAATCAACACG--AGAGA-CACGTGATTTTAACGTGGAAAACATATCCAACACGAGGGGGGATGGTA-ACGGGCG
TCAGCCAGCAAATCTTCACTATATCGAAGGAGGTTGCAAGCGCC-GGGATCTACAATTGATCAACTTATCTCGTACGGTG
ACTTACAAAGC--ATATATATAACACAGGTGACCTAGGTCAATACTGATCTC--CACTTCGGCCCAAGCCTACAGACGAC
GGGTCTCGCTCCGCTCACTTGTCAGAAGTTAGCATTTAT-GTTATACTTGAATTTGGATCATAACATAACAAACTTCACC
TTGAGAAAAATTCCATCTTATAGCATGAATGAGAACCTTCTCCCTGCACAACAAAGAA-AACACTTTTGGCGCCAAACAA
CCACTAGGGCTAATGTGTTATATCAACTAAGTCTGAGCAAAGCTTAAACTTAGCAACAGGAACTGACTTTGTCAACATAT
CAGCAGGATTATCATGAGTAGTAATCTTGCATACCTTTTAGTTTACCTTGCTCAACAATGTCCCTAACATAATGGTATTT
GACATCACTGTGCTTTGTTCTCTCATGGAGCATCTGATCCTTAGTGAGGTATATGGCACTCTGGCTCTCAGAAAACAGGT
TAATGCACAAATTATCTCCACGAAGC
>chr3D_308
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------------AATGTCGGGCCGC
TCGTGAACGAACGTGTGGCAGGAATAGGTTTCTCGGATTCCACACGGGTTTGAATGCGGCGAGGAGGCATGTTCTGCCGG
GCATGCAGCGGCTGGCGGCCTCCGTTGGCGCACCGCTTCAATGGCAGAGGCGGTGAGAGGTCGTGTTTGCATTGAGCCGT
TTTGAACGTGGAGCGGCCGCTCTACAACGGCATGAATGCTGGCAGCTTGCGCCGG-GAGAGAACACGCGCGG-CGAGGGA
GGAGGGGGTATTGGGTGGGCCAGTGTGGTTAGAAACGGGCGTGGGTGCTGTCCGGACGCCCACAAGGGCCTCACCCCCAT
GTTTGTCTCCGGTTTGCGGGAGAAAGTACGTCCGGCCGCTCTGCGGACGGATACATGC--GCATTGAATGTTGCAACACG
TCCGGACAGTGCGGTCCGGATGTATACAGACGGTTTGAGGGTCGACGTTGAAGATGCCCATAGAAAACGTTAATCAATCA
TTTTAAAATATTAAATGTGTACA--AAAAAATGTTAACTGAGTATTAAA--AATGTTAATCTTGTACTTTAAAATTATTA
ATTGTGTATTAGTAAAATACATTAGATATATACCAAAAATGGGTATGAAAAGATAGTGAAAACCAAGAAAAAAAC--AAA
AGCCAATAAATAACTAGAAAGAACCAAACAAAACCGAAGAAATAAAGAAAA-AGGCCGAGAAAATTTAGAAATAAACAAA
GAATACCAAAG-AAAACAAAGAGAAGTAAAG-AAAATAAAAGGCCCAGT-AAAAACAGAGAAATCCGGTGAAAAACCATT
GAAAAAACAAAAATAGAAAACACCTGGAAAACCAGTGGAATAACCGGCTCTTTTACCTTTACTTGGACGCACCCTACTGT
TTCATCACAACTCCCACATTGATGTACTGGTTTGTGGCATAACGCTTTATCCTAAAGACCTGGGTTCAATCCA-TTGCTT
CTCCCTGTTTCTTCTTTTTTATTTTAAGTCTTCACTACTGGGCCGCTCATTACTGTACACGCCTCAAGCGAGA-------
------------------------------------------------------------------CATAGCTCTTGCTG
CGCCCAGGCAACG--TATATAGGGGGCATGTTTTAATCTCAACCATTAATCCATATCGAAAAATGG-TAATGTTTCGAAA
AACAAGGTGTGGGAAGCATACCTAAACTATTTCATACTCCCTCCATTTCATAATATTTTAAATTTTACATTTATTTTAAA
TCAAACATCTTTAAGTTTGACCAAATCTATAA-AAATATATCAACATATACAACATCAACCGTATATAGCATGAAAATAT
ACTTCATGATGAATTTTTATAGTTATACTTTATGATAAATCTAATGAGACTAGTTTGATGTTGCAGATGAATTATCCATA
GACATAGTCAAATTTGAAGATCTTTAACTTAG------------------------------------------------
--------------------------------------------------------------------------------
-------------AATAAGCCTAAATTTCGGGTATTTTGGAACATAGTGTATTTTCTAATAGTTAAATAGTAATTAAATG
CCCTGTATTTTTTTT-GGGTAAAAAATGCGCTATAATTTAAAA-------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------------------------------ACCA
TTTCTCCTTTCGTTTCTCGCAGATATGGATTACGGGACCGAGCAAAGTTTAAAACACATCGCATGCATGACGCATACGAA
CAGAAGGTCCCATGCTAATAGGCGTTCCAATGGCTTCGACATTAGGAATTTAGGATCCACGCCATTCGCCTACACTTAAG
CAGAACCGCAAGAACACGAGACGTTCTCCTGAACCTACTCCCCACCACCCCGCTCGCCCTCTCCTC--CCACTATAAATC
CTCAAGAACACCGCCTCCTTCCTCCACCCACCACCAGAGCTCGCGAATAATCCACCGCAACAAGCAAAT-AACTCACCTC
CAT----CC----GCGCAATCTCTCAATCTTCCACAGGCATCAATGGCGGGCACAAGGAACAACGAGCTGCGCATGACCC
TGCTCGGCCTGGCCCTGCTGGGGCTCCTACTGCTGAGCCACACCGCGGCTCCGGTGGAAGCCGCCGCGGGCGTGCAGGAG
AACAGCTTCTCCATGAACGGCGCCGGCGGCCGCAGTCTCAACAGCTTCAGCATGAATACCGCCGAGACCGGCGAGGGCGC
CAAGGGGGGG------AAACCCGCCGCCGGCGACTTCTGATCGACGACCCTCCGTCCGTCGGCGTCGAGTACTAA-----
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------TTAAATA-TTTATCCGCCGGTTACCCCGGGCTTG--CATGCATGCATT----
----GCTCGTGCGGTGGGCGCGCAGGATCGATCG-ATCGGCCGGCCGCCCGGAGCTCCTGCATGCACGCGCGCG----AA
TGCTGCCTCGATCGTTTGATTAGGTATCGTGATTTTTGTTTGTCTGTGTAATTTGGATGTGCAGATGCAGTGCGTGTGCT
GCACCCATCCGTTGTGTTCTTCAGTGTAAGGGCCGTCTGTTCGTTTGTATGTGGCCTCACTGATCATTATGAAAGTTATT
AT--------------TTCTTAAACCAATGGAACGTAGGTGGTCATTAGAGAT-----------ACGCAATCGAACACGA
TAAAGAAATCAACACG--ACAGA-CACATGATTTTAACGTCGAAAACATGTCCAACACGAAGGGGGAAAAATAACAAGTG
TCAGCCAGCAAATTTTCACTATATCGAGGGAGGTTGCAAACGCC-GGGATCTACAATTGATCAATTTATCTCGTACGGTG
ACTTACAAAGG--ATATATATAACACAGGTAACCTATGTCAATACTGATCTT--CACTTCGGCCCAAGCCTACCGACGAC
GGGTCTCGCTCCGCTCGCCTGTTAGAAGTTAGTATTTAT-GTTATACTTGAATTTAGATCATAACATAACAAACTTCACC
TTGAGAAAAATTCCATCTTATAGCATGAATGAGAACCTTCTCCCTGAACAACAAAGAA-AACACTTTTGGCGCCAAACAA
TCACTAGGGCTAATGTGTTATATCAACTCAGTCCGAGCAAAGCTCAAACTTAGCAACAGGAACTGGCTTTGTCAGCATAT
CAGCAGGATTATCATGAGTACTAATCTTGCATACCTTTTAGTTTACCTTGCTCAACAATGTCCCCAACATAATGGTATTT
AACATCAATGTGCTTTGTTCTCTCATGGAACATCTGATCCTTAGTGAGGTATATGGCACTCCGGCTCTCAGAAAACAGGT
CAATGCCCAAATTATCTCCACGAAGC
>chr3A_308
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------------AATGTCGGCCCGC
TCGTGAATGAACGTGTGCTAGGAGTAGGTTTCTCGACTTTCACGCGGGTTTGAATGCAGTGAGGAGGCGTGTTCTGTCGG
GCGTGCAGCGGGCGGCGCCCTCGGCTGGCGCACCGCTTCAATGACGGAGGCAGTGAAAGGTCGTGTTCGCACTGAACCAT
TTTCAATGTGGAGCGGCCACTCTACAGCGACATGAATGCTGGCAGCTTGCGTCGGAGAGAGAACACGCGTGGGCGAGGGA
GGAGGGGGGG-TGGGTGGGCCAGTTTGGTTAGAAGCGGGTGTGGGTGCTATCCGGACGCCCACAAGGCCG----------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------AAAAATGTTAACTGAGTATTAAA--AATGTTAATCTTGTACTTTAAAATTATTA
ATTGTGTATTA-AAAAATAAATTAGATATATACCAGAAATGTATACGAAAAGACAGTGAAAACCAAGAAAAAA-CATAAA
AGCCAATAAA-AACTAGAAAGAACCAAACAAAACCGGAGAAATAAAGAAAAAAGGCCAAGAAAATGTAGAAAGAAACGAA
GAATACCAAAGAAAAACAAAGAGAAGTAAATAAAAATAAAAGGCCCAGTTAAAAACAGAGAAATCCAGTGAAAAATATTG
AAAAAAACAAAAATAGAAAACACCTGGAAAACCAGTGGAATAACCGGCTCTTTTACCTTTACTTGCCCGCGCCCTACTGT
CCCATCACAACTCCTACATTGAGCTACTGGTTTGTGGCATGACGCTTTATCCTAGAGAGCTGGGTTCATTCCCCTTGCTT
CTTCTTTTTTCTTCTTTTTTATTTGAAGTGTTCACTATTGGGCCGCTCATTACTGTTGATGCCTCAGGCGAGAGCACCTT
CCCATCTTGCCTGAAGGTGTTACCTAAACGTTTATAGGGGGCATGTTTTAATCTCAACCATTAATCCATATCTCTTGCTG
CGCCCAGGCAACG--TATATAGGGGGCATGTTTTAATCTCAACCATTAATCCATATC-AAAAATGG-TAATGTTTCGAAA
AAAAAGGTGT--------TACCTAAACTATTTCGTACTCCCTTCATTTCAAAATATTTTAAGTTTTACATTTGTCTTAAA
TCAAACATCTTTAAGTTTGATCAAATCTATAA-AAATATATCAACATATACAACATCAACCGTATATAGCATGAAAATAT
ACTTCATGATGAATTTTTATAGTTATACTTTATGATAAATCTAATGAGACTAATTTGATGGTGCAGATGAATTATCCATA
GGCATAGTCAAAATTGAAGATCTTTAACTTAGGGCCTGTTCGGAGGCCCTTCGCTCCACACGTCCCGCTCCAGGAGCAGC
CGGAGCTGCAGTTTAAAACAGCGGAGCGAGGAAATTGGTACTCCGTAGATTCTGTGATTTCCGAAGCGGGTGGGTTTCCG
AACAGCCCCTTAGAATCAGCCGAAAATTCGGGTATTTTGGAACATAGTGTATTTTCTAATAGTTAAATAATAATTAAATG
TCCTGTATTTTTTAGGGT---AAAAATGCGCTATAATTTAAAACAGTTTTGCTAAAGCACATCTAGATGTGTCATAAGTA
TTGCACATGTAAATCATATGTCATTGATCTTACATTAAGATTCGTGTAAATATTTTCTTTCCCTTTGATCTTTTTCTCTT
TATACTTGATTCACTCACTTAGATGTGCAATAACTAGGGCACATCTAGATGTGCCCTAGACACACCCAATTTAAAAACCA
TTTCTCCTTTCGTTTCTCGCAGATATGGATTACGGGACCGAGCAAAGTTTAAAACACATCGCATGCATGACGCATACCAA
CCGAAGGTCCCATGCTAATAGGCGTTCCAATGGCTTCAACATTAGGAATATAGGATCCACGCCATTCGCCTACACTTAAG
CAGAACCGCAAGAACACGAGACATTCTCCTGAACCCACTCCCCACCGCCCCTCTCGCCCTCTCCTC--CCACTATAAATC
CTCAAGAACACCGCATCCTTCCTCCACCCACCACAAGAGCTCGCTAATAATCCACCGCAATAAGCAGAT-AACCAACCTC
CGT----CC----GCGCAATCTCTCAATCTTCCACAGGCATCAATGGCGGGCGCAAGGAACAACGAGCTGCGCATGACCC
TGCTCGGCCTGGCCCTGCTGGGGCTCCTGCTGCTGAGCCACACCGCGGCTCCGGTGGAAGCCGCCGCGGGCGTGCAGGAG
AACAGCTTCTCCATGAACGGCGCCGGTGGCCGCAGTCTCAACAGCTTCAGCATGAACACCGCCGAGAGCGCTGAGGTCGC
CAAGGGGGGGAAGGCCAAACCCGCCGCCGGCGACTTCTGATCGACGACCCTCCGCCCGCCGCCGTCGAGTACTAA-----
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------TTAAATAATTTATCCTCCGGTTACCTCGTGCTTG--CATGCATGCGT----G
CATGGCTCGTGCGGTGGGCGCGCAGGATCGATCG-ATCGGCCGGCCACCCAGAGCTCCTGCATGCACGCGCGTG----AA
TGCTGCC----TCGTTTGATTAGGTATCGTGATTTTTGTTTGTGTGTGTAATTTGGATGTGCAGATGCAGTGCATGTGCT
GCACCCATCCGTTGTGTTCTTCAGTGTAAGGGCCGTCTGTTCTTTCGTACGTGGCCTCATTGATCATTATGAAAGTTATT
AT---ATTA-----------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------
>chr3B_1646
TCCACC--------------------------------------------------------------------------
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-------------------------------------------ACCACCCGTCTCTCCTTCTCCTT--CCACTATAAATC
CTCAAGAACACCTCCTCCTTCCTCCACCCACCACCAGAGCTCGCGAATAATCCACCGCAATAAACAAAT-AAACCCACC-
--TCCATCC----GTGCAATCTCTCAATCTTCCACAGGCATCAATGGCGGGCGCAAGGAACAACGAGCTGCGCATGACCC
TGCTCGGCCTGGCCCTGCTGGGGCTCCTGCTGCTGAGCCACACCGCGGCGCCGGTGGAAGCCGCCGCGGGCGTGAACGGG
AACAGCTTCTCCATGAACAGCATCGGCGGCCGCAGTCTCAAAAGCTTCAGCATGAACACCGCCGAGAACGGCGACGGCGC
CAAGGGGGGGAAGGTCAAACCCGCCGGCGGCGACTTCTGATCGACGACCCTCCGTCCGCCGCCGTCGAGTACTAA-----
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------TTAAATAATTTATCCTCCGGTTACCCCGTGCTTA--CATGCATGCGT----G
CATGGCTCCTGCGGTGGGCGCGCAGGATCGACCGCATCGGCCGGCCGCCCGGAGCTCCTGCATGCGCGCGCGCGCGCGAT
TGCTGCT----GCGTTTGATTAAGTATCGTGATTTTTGTTTGTGTGTGTAATTTGGATGTGCAGATGCAGTGCGTGTGCT
GCACCCATCCGTTGTGTTCTTCAGTGTAAGGGCCGTCTGTTCGTTTGTACGTGGCCCCACTGATCATTATGAAAGTTATT
AC---ATTACTAGTATTTCTTAAACCAGTGGACCGTAAGTGATCATTTGA------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------
>chr3D_1646
TCCACC--------------------------------------------------------------------------
--------------------------------------------------------------------------------
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-------------------------------------------ACCACCCGTCTCGCCTTCTCCTT--CCACTATAAATC
CTCAAGAACACCTCCTCCTTCCTCCACCCACCACCAGAGCTCGCGAATAATCCACCGCAATAAACAAAT-AAACCCACC-
--T----CC----GCGCAATCTCTCAATCTTCCACAGGCATCAATGGCGGGCGCAAGGAACAACGAGCTCCGCATGACCC
TGCTCGGCCTGGCCCTGCTGGGGCTCCTGCTGCTGAGCCACACCGCGGCGCCGGTGGAAGCCGCCGCGGGCGTGCACGAG
AACAGCTTCTCCATGAACAGCGTCGGCGGCCGCAGTCTCAAAAGCTTCAGCATGAACACTGCCGACAGCGGCAACGGCGC
CAAGGGGGGGAAGGTCAAACCCGCCGGCGGCGACTTCTGATCGACGACCCTCCGTCCGCCGCCGTCGAGTACTAA-----
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------TTAAATAA--TATCCTCCGGTTACCCCGTGCTTA--CATGCACGCGT----G
CATGGCTCCTGCGGTGGGCGGGCAGGATCGATCGCATCGGCCGGCCGCCCGGAGCTCCTGCATGCGCGCGCGCGCGCGTA
TGCTGCT----GCGTTTGATTAAGTATCGCGATTTTTGTTTGTGTATGTAATTTGGATGTGCAGATGCAGTGCGTGTGCT
GCACCCATCCGTTGTGTTCTTCAGTGTAAGGGCCGTCTGTTCGTCTGTACGTGGCCTCACTGGTCATTATGAAGGTTATT
TT---AT---TACTATTTCTTAAACCAGTGCACCGTAAGTGGTCATTTGA------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------
>chr3A_1646
TCCACC--------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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-------------------------------------------ACCACCCGTCTTGCCTTCTCCTATACCACTATAAATC
CACAAGAACACCTCCTCCTTCCTCCACC---CACCAGAGCTTGCGAATAATCCACCGCAATAAACAAAT-AAACCCACC-
--T----CCATCCGCGCAATCTCTCAATCTTCCACAGGCATCAATGGCGGGCGCAAGGAACAACGAGCTGCGCATGACCC
TGCTCGGCCTGGCCCTGCTGGGGCTCTTGCTGCTGAGCCACACCGCGGCGCCGGTGGAAGCCGCCGCGGGCGTGCAGGAG
AACATCTTCTCCGTGAACAGCGTCGGCGGCCGCAGTCTCAAAAGCTTCAGCATGAACACCGCCGAGAGCGGCGAGGTCGC
CAAGGGGGGGGATGCCAAACCCGCCGCCGGCGACTTCTGATCGACGACCCTCCATCCGCCGTTGTCGAGTATTAGTTAAA
TAATGAGTGAATTCCATTTTTTATCTTGTAGTTGTACATTTGTGACACATATTACCCTATTTACTGGAACTTTTATCGAA
ATGTCAGATTTTGGAGACTTTTAACACGGTTTTACCCCAGTTTTACATTTTGTTTGTTTATGGTCGATAGGATCAGCATG
TTGCGTCATTGATTCGTAAAAAAAACTGTAAGGATCGGAGGGCATCATTGGCGATCTTGTCCAAGCTTCTCTTGTCTATC
TGTTCCACTCCTTGTGGCCGTCCACATGTTTTTGGATACAGGGCGTCACCTCACACCTTACCTGATGGACACGCATCAAA
AAACGAGGGTCCAAAGATTTTAAAAGGGGTATTCTAGACGAATTTTCACTCGAAGGGGTAATTAGTGTCACAAATGTATA
AATATGGAGTAAAAAGTGGAATTCACTCTTAAATAATTTATCCTCCGGTTACCCCGTGCTTGTGCATGCATGCGT----G
CATGGCTCCTGCGGTGGGCGCGCAGGATCGATCGCATCGGCCGGCCGCCCGGAGCTCCTGCATGCACGCGCG----CGAA
TGCTGCC----TCGTTTGATTAGGTATTATGATTTTTGTTTGTGTGTGTAATTTGGATGTGCAGATGCAGTGCGTGTGCT
GCACCCATCCGTTGTGTTCTTCAGTGTAAGGGCCGTCTGTTCGTTTGTACATGGCCTCACTGATCATTATGAAAGTTATT
ATTATATTACTAGTATTTTTTAAACCAGTGGACCGTAAGTGGTCGTTTGA------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------
>chr3A_2359
--------------------------------------------------------------------------------
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-------TA------TTTCTTAAACCAGTGAACCGTAAGTGGTCATTTGTGTTAGAGATACAACACGCAATCGAACACGA
TGAAGAAGTCAACACG--AGAGA-CACGCGATTTTAACTTGGAAAACCTGTCCAACACGAAGGGGAAAAAATCACGGGCG
TCGGCCAACAAATCTTCACTATATCGAGGGAGGTTACAAACGTT-GGGATTTACAATCGATCAAGTTATCATGTTCGGTG
GCTTATAAAGGATATATATATAACACAGGTGACCTAGGTCAATACTGATCTC--CGCTTCGGCCCAAGCCAACCGGCGAC
CCGTCTCGGTCCGCTCGCTCGTCAGAAGTTAGCATTTAT-TTTATACTTGAATTTGG-----AACATAACAAACTTCACC
TCGTGAAAAATTCCATCTTATAGCATGAATGAGAACCTTCTCCCTGGACAATAAAGAA-AAGACTTTTGGCGCCAAACAA
CCACTTGGGCTAATCTGTTATACCAACTAAGTCTGAGCTTTGCTCAAACTTAGCAACAGGAACTGGCTTTGTCAACATAT
CAGTAGGATTATCATGAGTACTAGTCTTGCATAACTTTTAGTTTACCTTGCTCAACAATGTCTCAAACATAATGGTATAT
GACATTATTGTGCTTTGTTCTCTCACGGAACATTTGATTCTTAGTGAG-TATATGGCACTCTGACTCTCACAAAATAGGA
TAATGCAAGAATTATCTCCACAAAGC
>chr2B_2403
--------------------------------------------------------------------------------
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--------------------------------------------------------------------AATCGAACTCGA
TGAAGAACGAAAACAAGCAAGGGGCACGAGATTTTAATGTGGAAAACCCCTCCAACACGAAGGGGGGAGAA-CACTGGCG
CTAGCCATCCAAACTTCACTATATCGAGTGAAGTTACAAACGCCGGGGATTTACAACTGATCAACTTATCC-GTGCGGCG
TCTTACAAGAG--GTATATATAACACAGGTGACCTAGGTCAATACTGATCT----GCTTCGGCCGAAGCC-ACCGGCGAT
AGGCCTCGCTCTGCTCGCTCGTCAGAAGTTAGCCTCCCTCTTTATACTTGAATTTGGAGCATAACATAACAAACTCCACC
TTGAGACAAATTTCATCTTGTAGCATGAATGAAAACCTCCTCCCTGAACAACAAAGAA-AACACTTTCGGCACCAAACAA
CCACTAGGGCTAATGAGTTATACCAACTAAGTCTGAGCAAAGCTCAAACTTAGCAACATGAACTGGCTTTGTTAACATAT
CAGCAGGATTATCATGAGTACTAATCTTGCATACCTTC-AGTTTACCTTGCTCAACAATGTCTTGAACATAATGATATTT
GACACCAATGTGCTTTGTTATCTCATGGAACATCTGATCCTTAGTAAGGTAAATGGCACTCTGACTGCCACAAAACAAGT
TAATGCAAGAATTATCTCCATAAAGC
>chr4A_2425
--------------------------------------------------------------------------------
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-----------AACAAGCAGGGA-CACGAGATTTTAATGTGGAAAATCCCTCCAACACGAAGGGGAAAAAACCACGGGCG
CCAGCCAGCCAAATTTCACTATATCGAA-GAGGTTACAAACGCCGAGGATTTACAACCGATCAACTTATTCCATGTGGCG
GCTTACAAGAG--G--TATATAACACAGGTGACTTAGGTCAATACTGATCCATTCGACTCGTCTCAAGCCTATCGGCCAC
GGGCCTCGCTCCGCCCGCTCGTCAGAAGTTAGCCTCCCTCTTTATACTTGATTTTGGAGCATAACATAACAAGCTCCACC
TTGAGACAAATTCCATCTTCTAGCATGAATGAGAACCTCCTCCCTGAACAACAAAGAA-AACACTTTTGGCGCCAAACAA
CCACTAGGGCTAATGAGTTATACGAACTAAGTCTGAGCAAAGCTCAAACTTAGCAACGGGAACTGGCTTTGTCAACATAT
CAACAGAATTATCACGAGTACTAATCTTGCATACCTTC-AGTTTACCTTGCTCAACAATGTCTCAAACATAATGATATTT
GACATCAATGTGCTTCGTTCTCTCATGGAACATCTGATCCTTAGTAAGGTAAATGGCACTCTGACTGTCACAAAACAAGT
TAATGCAAGAATTATCTCCACAAAGC
>chr7A_2434
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---------------------GA-CACGAGATTTTAACGTGGAAAACCCCTCCCAAGCGAAGGGG-AAAAACCACGGGCG
CCAGCCAGCCAAACTTCACTATATCGGGTGAGG-TACAAACGACGGGGATTTACAACTGATCAACTTATCCCGTGCGGCG
GCTTACAAGAG--GTATATATAACACAGGTGACCTAGGTC----------TC--CGCTTCGGCCCAAGCCTACCGGCGAC
GGGCCTCGCTCCGCTCGCTCGTCAGAAGTTAGCCTCCCTCTTTATACTTGAATTTGGAGCATAACATAACAAACTCCACC
TTGAGACAAATTCCATCTTGTAGCATGAATGAGAACCTCCTCCCTGAACAACAAAGAAGAACACTTTCGGCGCCAAACAA
CCACTAGGGCTAATGAGTTATACCAACTAAGTCTGAGCAAAGCTCAAACTTAGCAACAGGAACTGGCTTCGTCAACATAT
CAGCAGGATTATCATGAGTACTAATCTTGCAGACCTTC-AGTTTACCTTGCTCAACAATGTCTCGAACATAATGATATTT
GACATCAATGTGCTTTGTTCTCTCATGCAACATCTGATCCTTAGTGAGGTAAATGGCACTCTGACTGTCACAAAACAAGT
TAATGCAAGAATTATCTCCACAAAGC
>chr5B_2445
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---------------------------------TTAACATGG-AAAACCCTCCAACACGAAGGGG-GGAAACCATGGGTG
CCCGCCAACAAATCTTCACTATATCGGGGGAGGTTACAAACGATGAGGATTTACAACTGATCAACTTATCCCATGCGACG
GCTTACAAGAG--GTATATATAACACATGTGACCTAGGTCAATATTGATCC----GCTTCGGCCCAAGCCTACCAGCTAT
CGGTGTTGCTCCACTCGCTCGTCAGAAGTTAGCCTTTCCCTTTATACTTGAATTTGGAGCATAACATAACAAACTCCACC
TTGAGACAAATTCCATCGTGTAGCATGAATGAGAACCTCCTCCCTGAAAAACAAAGAA-AACACTTTCGACATGAAACAA
CCACTAGGGCTAATGTGTTACACCAACTAAGTCTGAGCAAAGCTCAAACTTAGCAACATGGACTGGCTTTGTCAACATAT
CAGTTGGATTATCATGAGTACTAATATTGCATACCTTC-AGTTTACCTTGCTCAACAATGTCTCGAACATAATGATATTT
GACATCGATGTTCTTTGTTCTCTCTTGGAAAATTTGATCCTTAGTGAGGTATATGGCACTCTGACTATCACAAGACAAGT
TACTGCAAGTATTATCTCCACAAAGC
>SNPs
SS-S--SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS-------------
---------------------------------SS-----------S------------S--------------------
-------------------------S-----------------S---------------S---S----------------
-------S------------------------SS------------------S------------S-------S--S---
-------S-S-----------------------S----------------------S----------S--S---------
--------S----------------S--------------------------------SS----------S-----S--S
-----------S-S---S--S----S-----S------------S-S---S--------S-------S---------S--
---S--------S--SSSSSSSSSS----------------S-------SS------------S----------------
-----------------------------------------------------------------------S--------
------------------------SSSSSS----S---------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------SS------------------------------------------------SS-S---------S-SS
SSSSSS--------------------------------------------------------------------------
--------------------------------S-----------------------------------------------
----------------------------------------------------------------S---------------
------S-------------S-----------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------S----------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------S--S---------------------
--------------------------------------------------SS--------------S-------------
---------------------------------------------------------S----------------------
------------------------------------------------------------------S--S----------
-------------------------------S--S---------------------------------------------
--------------------------------S-------------------------S--S------------------
--------------------------------------------------------------------------------
------------S-------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------------------------------SSSS-
--------------------------------------------------------------------------------
----------------------------------------SS--------------------------------------
--------------------------------------------------------------------------S-----
-------------------------------------------------------------------S------------
-------------------------------------------------S----------S------S-SSS--------
---------------------------------------S----------------------------------------
----------S--------------------------------------------------------------S------
----------------S---------------------------------------------------------------
----------------------------------------------S---------------------------------
--------------------------------------------S--------------------S--------------
--------------------S-------------------------------------------S---------------
-------S---------------------S--------------------------------------------------
--------------------------
>forward_66
----------------------------------------------GGACTCTTCTGGCCCAACTC--------------
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--------------------------
>reverse_1517
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----------------------------------------------------------------------------CACG
TGTGGTGAAGCATACC----------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------
>forward_89
---------------------------------------------------------------------TGCTTCAGGGG
CTTCTTCTG-----------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------
>reverse_2371
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--------------------------------------------------GTGGATCCACGCCATTTGC-----------
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--------------------------
>forward_752
--------------------------------------------------------------------------------
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------------GCTCCAGACGTATGCAGACA------------------------------------------------
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--------------------------
>reverse_3800
--------------------------------------------------------------------------------
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---------------------------------------GCGCCGGGATCTACAATTGA---------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------
